audit-tools 0.52.2 → 0.52.4

package/dist/remediate/index.js

@@ -1,3 +1,7 @@
+import { recoverIngestHostResults } from "./steps/recoverIngest.js";
+import { resolveAdversarialDepth } from "./steps/contractPipeline.js";
+import { PHASE_TO_ARTIFACT, reviewRequirementForRole } from "./steps/contractPipelinePrompts.js";
+import { validateContractReviewInput } from "./contractPipeline/contractReviewBinding.js";
 // sites-pinned: tests/remediate/recover-verb-branches.test.ts
 // (the
 // ACCEPTED-WITH-ISSUES arm — its status token and exit code)
@@ -5,16 +9,17 @@ import { Command } from "commander";
 import { readFileSync } from "node:fs";
 import { join, dirname, resolve } from "node:path";
 import { fileURLToPath, pathToFileURL } from "node:url";
-import { decideNextStep, recoverIngestHostResults } from "./steps/nextStep.js";
+import { changeOperatorLifecycle, decideNextStep } from "./steps/nextStep.js";
 import { validateArtifacts } from "./validation/artifacts.js";
 import { CONTRACT_PIPELINE_VALIDATORS } from "./validation/contractPipeline.js";
 import { evaluateContractPipelineCrossGateOutcomes } from "./validation/contractPipelineGates.js";
 import { readRepairState, waivedJudgeAcceptedIds, } from "./contractPipeline/repairState.js";
 import { CP_ARTIFACT_NAMES, isEnvelope, stampToolCreatedAt, readContractArtifact, envelopePayload, } from "./contractPipeline/artifactStore.js";
+import { StateStore } from "./state/store.js";
 import { intakePaths } from "./intake.js";
-import { applyGuidanceFile, assertCliCommandAllowedFromCwd, callerWorkingDirectory, discoverRepoRoot, remediationArtifactsDir, resolveRepoRoot, invalidateStepContracts, readOptionalJsonFile, recoverSubmission, runTracked, runWithBlockedStepBackstop, } from "audit-tools/shared";
+import { assertCliCommandAllowedFromCwd, callerWorkingDirectory, discoverRepoRoot, remediationArtifactsDir, resolveRepoRoot, invalidateStepContracts, readOptionalJsonFile, recoverSubmission, runTracked, runWithBlockedStepBackstop, } from "audit-tools/shared";
 import { writeBlockedStep } from "./steps/stepWriter.js";
-import { remediationSubmissionBinding, } from "./steps/dispatch/hostHandoff.js";
+import { remediationSubmissionBinding } from "./steps/dispatch/hostHandoff.js";
 // src/remediate/index.ts (source) or dist/remediate/index.js (built) → three
 // dirnames up is the package root, holding package.json + skills/ + opencode.json.
 const pkgRoot = dirname(dirname(dirname(fileURLToPath(import.meta.url))));
@@ -64,7 +69,9 @@ program.hook("preAction", (_thisCommand, actionCommand) => {
 });
 program
     .command("next-step")
+    .option("--plan-only", "Finish planning, then persist a pause before implementation")
     .description("Write and print one backend-rendered remediation step")
+    .option("--verification-command <command>", "Operator-approved test command for this run; declared build/typecheck/lint checks remain")
     .option("--root <path>", ROOT_OPTION_DESCRIPTION)
     .option("--artifacts-dir <path>", "Artifacts directory", ".audit-tools/remediation")
     // Repeatable: each `--input <path>` accumulates into a string[] via a collect
@@ -76,6 +83,9 @@ program
 // Accumulator defaults to []; guard against an undefined `previous` so the
 // first occurrence starts the array cleanly even if the default was cleared.
 (value, previous) => (previous ?? []).concat([value]), [])
+    .option("--severity <level>", "Select this audit severity (repeatable; unioned with --finding-id)", (value, previous) => [...(previous ?? []), value])
+    .option("--finding-id <id>", "Select this audit finding ID (repeatable; unioned with --severity)", (value, previous) => [...(previous ?? []), value])
+    .option("--guidance <text>", "Use conversational feedback directly; the tool writes its canonical intake file")
     .option("--guidance-file <path>", "Single-step bootstrap: write this file's contents to intake/conversation-start.md (sole, idempotent writer) before deciding the step")
     .option("--finalize-closing", "Finalize a closing remediation state from a generated close_run step")
     .option("--force-replan", "Rebuild the remediation plan from the existing intake artifacts")
@@ -91,20 +101,43 @@ program
         // Single-step bootstrap: fold the optional guidance file into
         // intake/conversation-start.md in this same invocation, then decide the
         // step — no separate write-then-call dance for the host to remember.
-        if (options.guidanceFile) {
-            applyGuidanceFile(artifactsDir, options.guidanceFile);
-        }
         return withBackendLogsOnStderr(() => decideNextStep({
             root,
             artifactsDir,
             input: options.input,
-            guidanceFileSupplied: Boolean(options.guidanceFile),
+            severity: options.severity,
+            findingIds: options.findingId,
+            guidanceFileSupplied: options.guidance !== undefined || Boolean(options.guidanceFile),
+            guidanceText: options.guidance,
+            guidanceFile: options.guidanceFile,
+            planOnly: options.planOnly === true,
             finalizeClosing: options.finalizeClosing === true,
+            verificationCommand: options.verificationCommand,
             forceReplan: options.forceReplan === true,
         }));
     }, (reason) => writeBlockedStep({ root, artifactsDir, reason }));
     console.log(JSON.stringify(step, null, 2));
 });
+for (const action of ["pause", "resume", "cancel"]) {
+    program.command(action)
+        .description(`${action} the persisted remediation run without changing accepted work or owning host worktrees`)
+        .option("--root <path>", ROOT_OPTION_DESCRIPTION)
+        .option("--artifacts-dir <path>", "Artifacts directory", ".audit-tools/remediation")
+        .option("--worktree <path>", "Host-reported worktree location (metadata only)")
+        .option("--outcome <text>", "Host-reported work outcome (metadata only)")
+        .action(async (options) => {
+        const root = resolveRootOption(options.root);
+        const artifactsDir = resolveArtifactsDirOption(root, options.artifactsDir);
+        const step = await changeOperatorLifecycle({
+            root, artifactsDir, action,
+            ...((options.worktree || options.outcome) ? { hostReport: {
+                    ...(options.worktree ? { worktree: options.worktree } : {}),
+                    ...(options.outcome ? { outcome: options.outcome } : {}),
+                } } : {}),
+        });
+        console.log(JSON.stringify(step, null, 2));
+    });
+}
 // The four installer verbs are intercepted by the remediate-code bin BEFORE the
 // dist CLI is reached (`remediate-code.mjs` main), so nothing registered here can
 // run them. `ensure` used to be registered WITH an action calling a second,
@@ -251,16 +284,20 @@ export async function runValidateArtifactAction(options) {
             exitCode: 2,
         };
     }
-    // Unwrap a stored content-hash envelope so the bare payload is validated
-    // against its contract; a plain payload validates as-is. Uses the canonical
-    // isEnvelope predicate so CLI self-check and ingest unwrap identically.
-    const unwrapped = isEnvelope(parsed) ? parsed.payload : parsed;
-    // Stamp the tool-owned `created_at` (host has no clock) so the self-check
-    // matches ingest: a host payload without a timestamp is valid here too (B4).
-    const payload = stampToolCreatedAt(unwrapped, new Date().toISOString());
-    const structuralIssues = validator(payload, name);
     const root = resolveRootOption(options.root);
     const artifactsDir = resolveArtifactsDirOption(root, options.artifactsDir);
+    const role = Object.entries(PHASE_TO_ARTIFACT).find(([, artifact]) => artifact === name)?.[0] ?? "";
+    const depth = (await resolveAdversarialDepth(artifactsDir)).adversarialDepth;
+    const requirement = reviewRequirementForRole(role, depth);
+    const reviewed = await validateContractReviewInput({
+        artifactsDir, artifact: name, role, requirement,
+        raw: requirement === "ordinary" && isEnvelope(parsed) ? parsed.payload : parsed,
+    });
+    if (!reviewed.ok) {
+        return { result: { status: "error", name, issue_count: 1, issues: [{ path: `${name}.review`, severity: "error", message: reviewed.issue }] }, exitCode: 1 };
+    }
+    const payload = stampToolCreatedAt(reviewed.payload, new Date().toISOString());
+    const structuralIssues = validator(payload, name);
     let crossGateIssues;
     try {
         const payloads = new Map();
@@ -535,45 +572,48 @@ export async function recoverIngestVerb(options) {
  * never be reported as failed because a stale prompt could not be removed.
  */
 export async function recoverSubmissionVerb(options) {
-    const binding = await remediationSubmissionBinding({
-        root: options.root,
-        artifactsDir: options.artifactsDir,
-        runId: options.runId,
-        workItemId: options.submissionId,
-    });
-    if (binding === null) {
-        // No contract to check against must never read as "passes".
-        return {
-            status: "unrunnable",
-            message: `No live workload for run '${options.runId}' names work item ` +
-                `'${options.submissionId}'. Recovery refuses a submission it cannot validate.`,
-        };
-    }
-    const outcome = await recoverSubmission({
-        root: options.root,
-        artifactsDir: options.artifactsDir,
-        runId: options.runId,
-        submissionId: options.submissionId,
-        fromPath: options.from,
-        lane: options.submissionId,
-        submissionDir: binding.submissionDir,
-    }, binding.validate);
-    if (!outcome.ok) {
+    const store = new StateStore(options.artifactsDir);
+    return store.withActiveOperator(async () => {
+        const binding = await remediationSubmissionBinding({
+            root: options.root,
+            artifactsDir: options.artifactsDir,
+            runId: options.runId,
+            workItemId: options.submissionId,
+        });
+        if (binding === null) {
+            // No contract to check against must never read as "passes".
+            return {
+                status: "unrunnable",
+                message: `No live workload for run '${options.runId}' names work item ` +
+                    `'${options.submissionId}'. Recovery refuses a submission it cannot validate.`,
+            };
+        }
+        const outcome = await recoverSubmission({
+            root: options.root,
+            artifactsDir: options.artifactsDir,
+            runId: options.runId,
+            submissionId: options.submissionId,
+            fromPath: options.from,
+            lane: options.submissionId,
+            submissionDir: binding.submissionDir,
+        }, binding.validate);
+        if (!outcome.ok) {
+            return {
+                status: "unrunnable",
+                message: `recover-submission refused the payload for '${options.submissionId}' ` +
+                    `(${outcome.issue.code}): ${outcome.issue.message}`,
+            };
+        }
+        await invalidateStepContracts(options.artifactsDir);
         return {
-            status: "unrunnable",
-            message: `recover-submission refused the payload for '${options.submissionId}' ` +
-                `(${outcome.issue.code}): ${outcome.issue.message}`,
-        };
-    }
-    await invalidateStepContracts(options.artifactsDir);
-    return {
-        status: "recovered",
-        body: {
             status: "recovered",
-            work_item_id: options.submissionId,
-            submission_path: outcome.submission_path,
-        },
-    };
+            body: {
+                status: "recovered",
+                work_item_id: options.submissionId,
+                submission_path: outcome.submission_path,
+            },
+        };
+    });
 }
 export function runValidateCommand(deps = {}) {
     const run = deps.run ?? runTracked;

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package/dist/remediate/intake.d.ts

@@ -33,6 +33,40 @@ declare const IntakeSourceManifestSchema: z.ZodObject<{
         type: "conversation" | "document" | "structured_audit";
         label?: string | undefined;
     }>, "many">;
+    finding_selection: z.ZodOptional<z.ZodObject<{
+        criteria: z.ZodObject<{
+            severity: z.ZodArray<z.ZodEnum<["critical", "high", "medium", "low", "info"]>, "many">;
+            finding_ids: z.ZodArray<z.ZodString, "many">;
+        }, "strict", z.ZodTypeAny, {
+            severity: ("info" | "high" | "low" | "critical" | "medium")[];
+            finding_ids: string[];
+        }, {
+            severity: ("info" | "high" | "low" | "critical" | "medium")[];
+            finding_ids: string[];
+        }>;
+        source_path: z.ZodString;
+        source_hash: z.ZodString;
+        projected_path: z.ZodString;
+        selected_count: z.ZodNumber;
+    }, "strict", z.ZodTypeAny, {
+        source_hash: string;
+        criteria: {
+            severity: ("info" | "high" | "low" | "critical" | "medium")[];
+            finding_ids: string[];
+        };
+        source_path: string;
+        projected_path: string;
+        selected_count: number;
+    }, {
+        source_hash: string;
+        criteria: {
+            severity: ("info" | "high" | "low" | "critical" | "medium")[];
+            finding_ids: string[];
+        };
+        source_path: string;
+        projected_path: string;
+        selected_count: number;
+    }>>;
 }, "strict", z.ZodTypeAny, {
     schema_version: "remediate-code-intake-source-manifest/v1alpha1";
     created_from: "conversation" | "mixed" | "input" | "default_candidates";
@@ -41,6 +75,16 @@ declare const IntakeSourceManifestSchema: z.ZodObject<{
         type: "conversation" | "document" | "structured_audit";
         label?: string | undefined;
     }[];
+    finding_selection?: {
+        source_hash: string;
+        criteria: {
+            severity: ("info" | "high" | "low" | "critical" | "medium")[];
+            finding_ids: string[];
+        };
+        source_path: string;
+        projected_path: string;
+        selected_count: number;
+    } | undefined;
 }, {
     schema_version: "remediate-code-intake-source-manifest/v1alpha1";
     created_from: "conversation" | "mixed" | "input" | "default_candidates";
@@ -49,6 +93,16 @@ declare const IntakeSourceManifestSchema: z.ZodObject<{
         type: "conversation" | "document" | "structured_audit";
         label?: string | undefined;
     }[];
+    finding_selection?: {
+        source_hash: string;
+        criteria: {
+            severity: ("info" | "high" | "low" | "critical" | "medium")[];
+            finding_ids: string[];
+        };
+        source_path: string;
+        projected_path: string;
+        selected_count: number;
+    } | undefined;
 }>;
 export type IntakeSourceManifest = z.infer<typeof IntakeSourceManifestSchema>;
 /**

package/dist/remediate/intake.d.ts.map

@@ -1 +1 @@
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package/dist/remediate/intake.js

@@ -1,3 +1,4 @@
+import { FindingSelectionSchema } from "./intakeSelection.js";
 // sites-pinned: tests/remediate/intake-starting-point-contract.test.ts, tests/remediate/n-r04-intent-checkpoint.test.ts, tests/remediate/intake-sources-and-digest.test.ts
 import { existsSync } from "node:fs";
 import { join, resolve } from "node:path";
@@ -29,6 +30,13 @@ const IntakeSourceManifestSchema = z
     schema_version: z.literal(INTAKE_SOURCE_MANIFEST_SCHEMA_VERSION),
     created_from: z.enum(["input", "default_candidates", "conversation", "mixed"]),
     sources: z.array(IntakeSourceSchema).min(1),
+    finding_selection: z.object({
+        criteria: FindingSelectionSchema,
+        source_path: z.string().min(1),
+        source_hash: z.string().min(1),
+        projected_path: z.string().min(1),
+        selected_count: z.number().int().nonnegative(),
+    }).strict().optional(),
 })
     .strict();
 /**
@@ -274,6 +282,7 @@ export function buildMixedSourceManifest(inputSourceManifest, conversationPath)
     return {
         schema_version: INTAKE_SOURCE_MANIFEST_SCHEMA_VERSION,
         created_from: "mixed",
+        ...(inputSourceManifest.finding_selection ? { finding_selection: inputSourceManifest.finding_selection } : {}),
         sources: [
             ...inputSourceManifest.sources,
             {
@@ -298,6 +307,8 @@ export function sourceManifestsEquivalent(a, b) {
         return false;
     if (a.sources.length !== b.sources.length)
         return false;
+    if (JSON.stringify(a.finding_selection) !== JSON.stringify(b.finding_selection))
+        return false;
     return a.sources.every((source, index) => {
         const other = b.sources[index];
         return source.type === other.type && source.path === other.path;
@@ -307,7 +318,10 @@ export function resolveManifestSources(root, manifest) {
     const resolved = [];
     const missing = [];
     for (const source of manifest.sources) {
-        const absolutePath = resolve(root, source.path);
+        const selectedPath = source.type === "structured_audit" &&
+            source.path === manifest.finding_selection?.source_path
+            ? manifest.finding_selection.projected_path : source.path;
+        const absolutePath = resolve(root, selectedPath);
         const normalized = { ...source, path: absolutePath };
         if (existsSync(absolutePath)) {
             resolved.push(normalized);

package/dist/remediate/intake.js.map

@@ -1 +1 @@
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package/dist/remediate/intakeSelection.d.ts

@@ -0,0 +1,27 @@
+import { z } from "zod";
+import { type AuditFindingsReport } from "audit-tools/shared";
+export declare const FindingSelectionSchema: z.ZodObject<{
+    severity: z.ZodArray<z.ZodEnum<["critical", "high", "medium", "low", "info"]>, "many">;
+    finding_ids: z.ZodArray<z.ZodString, "many">;
+}, "strict", z.ZodTypeAny, {
+    severity: ("info" | "high" | "low" | "critical" | "medium")[];
+    finding_ids: string[];
+}, {
+    severity: ("info" | "high" | "low" | "critical" | "medium")[];
+    finding_ids: string[];
+}>;
+export type FindingSelection = z.infer<typeof FindingSelectionSchema>;
+export interface FindingSelectionOptions {
+    severity?: string[];
+    findingIds?: string[];
+}
+/** Undefined means resume/no selection; explicit empty arrays select no work. */
+export declare function requestedFindingSelection(options: FindingSelectionOptions): FindingSelection | undefined;
+/** The selector is a union; downstream scope filters intersect this report. */
+export declare function selectAuditFindings(value: unknown, selection: FindingSelection): AuditFindingsReport;
+export declare function renderFindingSelection(selection: {
+    criteria: FindingSelection;
+    selected_count: number;
+    projected_path: string;
+} | undefined): string;
+//# sourceMappingURL=intakeSelection.d.ts.map

package/dist/remediate/intakeSelection.d.ts.map

@@ -0,0 +1 @@
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package/dist/remediate/intakeSelection.js

@@ -0,0 +1,37 @@
+// sites-pinned: tests/remediate/intake-finding-selection.test.ts
+import { z } from "zod";
+import { FindingSeveritySchema, projectApprovedFindings, projectAuditFindingsReportSubset, } from "audit-tools/shared";
+export const FindingSelectionSchema = z.object({
+    severity: z.array(FindingSeveritySchema),
+    finding_ids: z.array(z.string().min(1)),
+}).strict();
+/** Undefined means resume/no selection; explicit empty arrays select no work. */
+export function requestedFindingSelection(options) {
+    if (options.severity === undefined && options.findingIds === undefined)
+        return undefined;
+    return FindingSelectionSchema.parse({
+        severity: [...new Set(options.severity ?? [])].sort(),
+        finding_ids: [...new Set(options.findingIds ?? [])].sort(),
+    });
+}
+/** The selector is a union; downstream scope filters intersect this report. */
+export function selectAuditFindings(value, selection) {
+    const { findings } = projectApprovedFindings(value);
+    const known = new Set(findings.map((finding) => finding.id));
+    const unknown = selection.finding_ids.filter((id) => !known.has(id));
+    if (unknown.length > 0)
+        throw new Error(`Unknown finding IDs in intake selection: ${unknown.join(", ")}`);
+    return projectAuditFindingsReportSubset(value, findings.filter((finding) => selection.severity.includes(finding.severity) || selection.finding_ids.includes(finding.id)));
+}
+export function renderFindingSelection(selection) {
+    if (!selection)
+        return "";
+    return [
+        "", "## Native finding selection already applied", "",
+        `${selection.selected_count} findings were selected by the UNION of severity ${JSON.stringify(selection.criteria.severity)} OR explicit IDs ${JSON.stringify(selection.criteria.finding_ids)}.`,
+        `The selected source is ${selection.projected_path}.`,
+        "Keep every finding in this selected source unless the user explicitly requests further narrowing. Do not copy the native severity list alone into checkpoint filters: that would lose explicitly selected IDs of other severities.",
+        "Additional user-confirmed checkpoint filters and excluded scope intersect this selected set. Leave filters empty when no further narrowing was requested.",
+    ].join("\n");
+}
+//# sourceMappingURL=intakeSelection.js.map

package/dist/remediate/intakeSelection.js.map

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package/dist/remediate/intent/intentPersistence.d.ts

@@ -0,0 +1,41 @@
+import { type ConstraintClauseRecord, type InterpretedIntent, type IntentCheckpoint, type RunLogger } from "audit-tools/shared";
+/** Sidecar artifact recording the deterministic interpretation of free_form_intent. */
+export declare const INTENT_INTERPRETATION_FILENAME = "intent-interpretation.json";
+export declare const INTENT_INTERPRETATION_SCHEMA_VERSION = "remediate-code-intent-interpretation/v1alpha2";
+export interface PersistedIntentInterpretation {
+    schema_version: typeof INTENT_INTERPRETATION_SCHEMA_VERSION;
+    /** The interpreter's structured output (lens weights / priority / scope). */
+    interpreted: InterpretedIntent;
+    /**
+     * Clauses the clause pipeline could not encode as a lens weight, priority
+     * signal, or scope emphasis — with their stable identity and blocking
+     * question. CONSUMED by the interpret_intent obligation: an unanswered
+     * record blocks the decide loop until the host resolves it via a
+     * `constraint_clauses` entry on the checkpoint (CE-004, identity-keyed).
+     */
+    unencodable_clauses: ConstraintClauseRecord[];
+    created_at: string;
+}
+/**
+ * Interpret a confirmed checkpoint's `free_form_intent` via the shared
+ * deterministic interpreter and persist the structured signals to a sidecar
+ * artifact. Idempotent and best-effort: returns the persisted interpretation (or
+ * null when there is nothing to interpret / no confirmed checkpoint) and never
+ * throws into the decide loop. The raw `free_form_intent` string is NOT returned
+ * or threaded anywhere — only the structured `InterpretedIntent` is (INV-S04).
+ */
+export declare function interpretConfirmedCheckpointIntent(artifactsDir: string, checkpoint: IntentCheckpoint | undefined, runLogger?: RunLogger): Promise<PersistedIntentInterpretation | null>;
+/**
+ * Read the persisted intent interpretation — the LOAD-BEARING input to the
+ * constraint-clause gate — repairing it by re-derivation when it is missing,
+ * unparseable, or carries a stale schema_version. Returns null only when
+ * there is nothing to interpret (no confirmed checkpoint / empty intent).
+ */
+export declare function readOrRepairIntentInterpretation(artifactsDir: string, checkpoint: IntentCheckpoint | undefined, runLogger?: RunLogger): Promise<PersistedIntentInterpretation | null>;
+/**
+ * Sync sidecar read for the obligation's derive scan. Returns the persisted
+ * interpretation, or null when the sidecar is missing, unreadable, or stale —
+ * the execute path repairs via {@link readOrRepairIntentInterpretation}.
+ */
+export declare function readPersistedIntentInterpretationSync(sidecarPath: string): PersistedIntentInterpretation | null;
+//# sourceMappingURL=intentPersistence.d.ts.map