audit-tools 0.32.23 → 0.32.27

package/dist/remediate/steps/dispatch/worktreeLifecycle.d.ts

@@ -26,7 +26,16 @@ export declare function createWorktree(root: string, worktreePath: string, branc
  * Best-effort: a copy failure must not abort the dispatch (logged, not thrown).
  */
 export declare function seedUntrackedDeclaredPaths(root: string, worktreeRoot: string, declaredPaths: Iterable<string>): void;
-/** Remove a git worktree. Best-effort: logs but does not throw on failure. */
+/**
+ * Remove ONE git worktree, PATH-SCOPED (INV-WTS-1/4). Always addresses only the
+ * named `worktreePath` via `git worktree remove --force <path>` — never a global
+ * `git worktree prune` that could drop a SIBLING node's registered-but-transiently-
+ * absent worktree. `git worktree remove --force` clears the registration even when
+ * the directory is already MISSING (a stale admin entry), so this alone replaces
+ * the prior global-prune reset step. Best-effort: a genuinely-absent + unregistered
+ * path (git reports "is not a working tree" and the dir does not exist) is a silent
+ * no-op; any other failure is surfaced on stderr, never thrown.
+ */
 export declare function removeWorktree(root: string, worktreePath: string): void;
 /**
  * Fully reset a node's isolated worktree + branch so a fresh `createWorktree -b`
@@ -40,25 +49,29 @@ export declare function removeWorktree(root: string, worktreePath: string): void
  * worktree/branch is the expected first-attempt case, not an error). Any partial
  * edits from a throttled prior attempt are intentionally discarded — the
  * re-dispatch redoes the node from HEAD.
+ *
+ * INV-WTS-1/4 (no sibling clobber, stale-sweep never prunes in-flight work): every
+ * step is scoped to THIS node's own `worktreePath` / `branchName`. There is NO
+ * global `git worktree prune` — a global prune drops the admin entry of ANY sibling
+ * worktree whose directory is transiently absent (a sibling between its own rmSync
+ * and re-create), which is the exact data-loss race this module closes. Path-scoped
+ * `removeWorktree` clears even a stale registration whose dir is already gone, so
+ * the prune is unnecessary. Callers serialize a node's reset/create against its own
+ * accept via `worktreeNodeLockPath` (INV-WTS-8), so two operations on the SAME node
+ * never interleave, while DIFFERENT nodes never touch each other's path.
  */
 export declare function resetNodeWorktreeAndBranch(root: string, worktreePath: string, branchName: string): void;
+export declare function verifyNodeInWorktree(worktreePath: string, targetedCommands: string[], 
 /**
- * Run each targeted command in the worktree directory. Returns pass/fail and
- * combined output.
- *
- * `targeted_commands` are opaque host-authored command *strings* (e.g.
- * `npm run build`, `grep -c '/packages/' .gitignore`, anything with pipes,
- * quotes, or redirections), NOT pre-tokenized argv. They are run through the
- * platform shell (`runShellCommand` → `spawnSync(..., { shell: true })`, the
- * same path `close.ts` uses for `test_command`/`e2e_command`) so the shell — not
- * a word-split + `spawnSync(shell:false)` — resolves the verb. That is what
- * makes this OS-agnostic: on win32 `cmd.exe` natively execs `.cmd` shims (npm,
- * npx, …) and resolves PATH commands; on darwin/linux `/bin/sh` does. The prior
- * argv path ENOENT'd the *spawn itself* for any verb that wasn't a bare
- * executable (e.g. `grep` on Windows), turning a correct fix into a phantom
- * contract failure that burned the retry budget.
+ * INV-WTS-2: enforce that the verify cwd IS its own git top-level (a per-node
+ * ISOLATED worktree). Set by the accept-node path (`acceptNodeWorktree`) — the
+ * enforcement point — so a worktree deleted out from under the verify fails LOUD
+ * instead of resolving up to the enclosing MAIN checkout and false-greening
+ * against unrelated code. Left OFF (default) for the deliberately-main-rooted
+ * re-verify callers (triage re-runs a node's `targeted_commands` at the repo root,
+ * which is legitimately a subdir of no isolated worktree).
  */
-export declare function verifyNodeInWorktree(worktreePath: string, targetedCommands: string[]): WorktreeVerifyResult;
+enforceWorktreeRoot?: boolean): WorktreeVerifyResult;
 /** Merge the worktree branch into the current HEAD via cherry-pick. On failure, removes the worktree and returns the error. */
 export declare function mergeWorktree(root: string, worktreePath: string, branchName: string): {
     success: true;
@@ -109,6 +122,18 @@ export declare function remediationBranchName(runId: string): string;
  * cherry-pick → cross-package check → reset sequence through this single lock.
  */
 export declare function baseBranchLockPath(root: string, runId: string): string;
+/**
+ * Per-node worktree lock path (INV-WTS-1/8). Serializes create / reset / remove /
+ * accept for ONE node so a concurrent operation on the SAME node never interleaves
+ * (and a scoped removal can't race its own re-create). DISTINCT from
+ * {@link baseBranchLockPath} (base-branch.lock) and the per-run `rolling-session.lock`
+ * — `withFileLock` is a non-reentrant `wx` create, so sharing a path self-deadlocks
+ * (INV-WTS-6). Keyed on the block id so two DIFFERENT nodes hold DIFFERENT locks and
+ * never contend. INV-WTS-8: whenever both are held, this per-node lock is acquired
+ * BEFORE the base-branch lock on every accept path, so the fixed total order makes an
+ * AB/BA cross-lock deadlock unreachable by construction.
+ */
+export declare function worktreeNodeLockPath(root: string, runId: string, blockId: string): string;
 /** Durable ref under which a failed-but-committed node's commit is preserved. */
 export declare function quarantineRef(runId: string, blockId: string): string;
 /**
@@ -142,6 +167,20 @@ export declare function quarantineUncommittedWorktreeEdits(root: string, worktre
     ref: string;
     commit: string;
 } | null;
+/**
+ * Point a node's durable quarantine ref straight at a captured commit OID, with no
+ * live branch dependency (INV-WTS-3/7 clobber recovery). Used when a concurrent
+ * sweep/accept has already reset or deleted the node's branch ref toward base so
+ * `quarantineFailedNodeCommit` (which rev-parses the branch) can no longer resolve
+ * the work — the captured OID from the node's own accept-outcome is still a
+ * reachable commit object, so preserving it here keeps the honest committed work
+ * recoverable instead of silently lost. Best-effort; returns the ref + commit, or
+ * null when the update-ref failed.
+ */
+export declare function quarantineCommitByOid(root: string, runId: string, blockId: string, commitOid: string): {
+    ref: string;
+    commit: string;
+} | null;
 /** Clear a node's quarantine ref (e.g. once a later re-dispatch landed successfully). Best-effort. */
 export declare function clearQuarantinedCommit(root: string, runId: string, blockId: string): void;
 /** Quarantined failed-node commits still preserved for a run, for recovery surfacing in the report. */

package/dist/remediate/steps/dispatch/worktreeLifecycle.d.ts.map

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package/dist/remediate/steps/dispatch/worktreeLifecycle.js

@@ -69,18 +69,28 @@ export function seedUntrackedDeclaredPaths(root, worktreeRoot, declaredPaths) {
         }
     }
 }
-/** Remove a git worktree. Best-effort: logs but does not throw on failure. */
+/**
+ * Remove ONE git worktree, PATH-SCOPED (INV-WTS-1/4). Always addresses only the
+ * named `worktreePath` via `git worktree remove --force <path>` — never a global
+ * `git worktree prune` that could drop a SIBLING node's registered-but-transiently-
+ * absent worktree. `git worktree remove --force` clears the registration even when
+ * the directory is already MISSING (a stale admin entry), so this alone replaces
+ * the prior global-prune reset step. Best-effort: a genuinely-absent + unregistered
+ * path (git reports "is not a working tree" and the dir does not exist) is a silent
+ * no-op; any other failure is surfaced on stderr, never thrown.
+ */
 export function removeWorktree(root, worktreePath) {
-    // Already-absent worktree = silent no-op: no spawn, no stderr, no throw. A
-    // path that still exists but fails git-remove for another reason is surfaced
-    // exactly as before. We do NOT match on the 'not a working tree' stderr text.
-    if (!existsSync(worktreePath))
-        return;
     const result = spawnSyncHidden("git", ["worktree", "remove", "--force", worktreePath], { cwd: root, encoding: "utf8", shell: false });
-    if (result.status !== 0) {
-        const stderr = (result.stderr ?? "").trim();
-        process.stderr.write(`[remediate-code] worktree remove failed (exit ${result.status ?? "unknown"}): ${stderr}\n`);
-    }
+    if (result.status === 0)
+        return;
+    const stderr = (result.stderr ?? "").trim();
+    // "not a working tree" = the path was never a registered worktree. When the
+    // directory is ALSO absent there is genuinely nothing to remove → silent no-op.
+    // When the directory still exists (an orphaned plain dir) it is a real failure
+    // worth surfacing (the caller's rmSync then clears the leftover dir).
+    if (/not a working tree/i.test(stderr) && !existsSync(worktreePath))
+        return;
+    process.stderr.write(`[remediate-code] worktree remove failed (exit ${result.status ?? "unknown"}): ${stderr}\n`);
 }
 /**
  * Fully reset a node's isolated worktree + branch so a fresh `createWorktree -b`
@@ -94,19 +104,28 @@ export function removeWorktree(root, worktreePath) {
  * worktree/branch is the expected first-attempt case, not an error). Any partial
  * edits from a throttled prior attempt are intentionally discarded — the
  * re-dispatch redoes the node from HEAD.
+ *
+ * INV-WTS-1/4 (no sibling clobber, stale-sweep never prunes in-flight work): every
+ * step is scoped to THIS node's own `worktreePath` / `branchName`. There is NO
+ * global `git worktree prune` — a global prune drops the admin entry of ANY sibling
+ * worktree whose directory is transiently absent (a sibling between its own rmSync
+ * and re-create), which is the exact data-loss race this module closes. Path-scoped
+ * `removeWorktree` clears even a stale registration whose dir is already gone, so
+ * the prune is unnecessary. Callers serialize a node's reset/create against its own
+ * accept via `worktreeNodeLockPath` (INV-WTS-8), so two operations on the SAME node
+ * never interleave, while DIFFERENT nodes never touch each other's path.
  */
 export function resetNodeWorktreeAndBranch(root, worktreePath, branchName) {
+    // Path-scoped removal: clears the registration (even a stale one whose dir is
+    // missing) for THIS node only — never a global prune that could drop a sibling.
     removeWorktree(root, worktreePath);
-    // Prune stale worktree admin entries (e.g. a dir deleted out from under git),
-    // otherwise `git worktree add` can refuse a path it still thinks is registered.
-    spawnSyncHidden("git", ["worktree", "prune"], { cwd: root, shell: false });
     // Force-delete the leftover branch from a prior attempt so `-b` recreates it.
     spawnSyncHidden("git", ["branch", "-D", branchName], { cwd: root, shell: false });
     // Force-remove a leftover worktree DIRECTORY: when a prior attempt's worktree
     // became an orphaned dir (registered admin entry gone but files remain),
-    // `git worktree remove` no-ops ("is not a working tree") and `git worktree add`
+    // `git worktree remove` reports "is not a working tree" and `git worktree add`
     // then refuses because the path already exists. Deleting the dir makes the
-    // re-create succeed. Best-effort.
+    // re-create succeed. Best-effort, and scoped to this node's own path.
     if (existsSync(worktreePath)) {
         rmSync(worktreePath, { recursive: true, force: true });
     }
@@ -127,7 +146,51 @@ export function resetNodeWorktreeAndBranch(root, worktreePath, branchName) {
  * executable (e.g. `grep` on Windows), turning a correct fix into a phantom
  * contract failure that burned the retry budget.
  */
-export function verifyNodeInWorktree(worktreePath, targetedCommands) {
+/**
+ * INV-WTS-2 escape check: returns a LOUD diagnostic string when `worktreeRoot` is
+ * NOT safe to run a build-free verify in — either the cwd was removed (a concurrent
+ * sweep deleted the worktree → a bare command would ENOENT or resolve up to MAIN),
+ * or git resolves an ENCLOSING top-level distinct from the cwd (the worktree escaped
+ * to the main checkout). Returns null when the cwd IS its own git top-level (the
+ * healthy isolated-worktree case). A cwd that exists but is not inside any git work
+ * tree (`status != 0`, no spawn error) is NOT an escape — only a resolved enclosing
+ * top-level is — so that case returns null too (never a false refusal).
+ */
+function verifyCwdEscapeDiagnostic(worktreeRoot) {
+    const probe = spawnSyncHidden("git", ["rev-parse", "--show-toplevel"], { cwd: worktreeRoot, encoding: "utf8", shell: false });
+    if (probe.error) {
+        return (`[remediate-code] verify REFUSED: the verify cwd ${worktreeRoot} no longer exists ` +
+            `(${probe.error.code ?? "spawn error"}). The worktree was ` +
+            `removed out from under the verify (a concurrent sweep/accept); refusing to run a ` +
+            `build-free verify that would false-green against unrelated code.`);
+    }
+    if (probe.status === 0) {
+        const top = (probe.stdout ?? "").trim();
+        if (top.length > 0 && canonicalPathKey(top) !== canonicalPathKey(worktreeRoot)) {
+            return (`[remediate-code] verify REFUSED: git top-level for ${worktreeRoot} is ${top}, not ` +
+                `the cwd itself — the verify cwd is INSIDE an enclosing checkout (a per-node worktree ` +
+                `deleted out from under it resolves up to MAIN). Refusing to run a build-free verify ` +
+                `that would false-green against unrelated code.`);
+        }
+    }
+    return null;
+}
+export function verifyNodeInWorktree(worktreePath, targetedCommands, 
+/**
+ * INV-WTS-2: enforce that the verify cwd IS its own git top-level (a per-node
+ * ISOLATED worktree). Set by the accept-node path (`acceptNodeWorktree`) — the
+ * enforcement point — so a worktree deleted out from under the verify fails LOUD
+ * instead of resolving up to the enclosing MAIN checkout and false-greening
+ * against unrelated code. Left OFF (default) for the deliberately-main-rooted
+ * re-verify callers (triage re-runs a node's `targeted_commands` at the repo root,
+ * which is legitimately a subdir of no isolated worktree).
+ */
+enforceWorktreeRoot = false) {
+    if (enforceWorktreeRoot) {
+        const escape = verifyCwdEscapeDiagnostic(worktreePath);
+        if (escape !== null)
+            return { passed: false, output: escape };
+    }
     const outputs = [];
     for (const cmd of targetedCommands) {
         const r = runShellCommand(cmd, {
@@ -267,6 +330,20 @@ export function remediationBranchName(runId) {
 export function baseBranchLockPath(root, runId) {
     return join(root, ".audit-tools", "remediation", "runs", refSafeSegment(runId, "run"), "base-branch.lock");
 }
+/**
+ * Per-node worktree lock path (INV-WTS-1/8). Serializes create / reset / remove /
+ * accept for ONE node so a concurrent operation on the SAME node never interleaves
+ * (and a scoped removal can't race its own re-create). DISTINCT from
+ * {@link baseBranchLockPath} (base-branch.lock) and the per-run `rolling-session.lock`
+ * — `withFileLock` is a non-reentrant `wx` create, so sharing a path self-deadlocks
+ * (INV-WTS-6). Keyed on the block id so two DIFFERENT nodes hold DIFFERENT locks and
+ * never contend. INV-WTS-8: whenever both are held, this per-node lock is acquired
+ * BEFORE the base-branch lock on every accept path, so the fixed total order makes an
+ * AB/BA cross-lock deadlock unreachable by construction.
+ */
+export function worktreeNodeLockPath(root, runId, blockId) {
+    return join(root, ".audit-tools", "remediation", "runs", refSafeSegment(runId, "run"), `worktree-${refSafeSegment(blockId, "node")}.lock`);
+}
 /** Durable ref under which a failed-but-committed node's commit is preserved. */
 export function quarantineRef(runId, blockId) {
     return `refs/remediation-quarantine/${refSafeSegment(runId, "run")}/${refSafeSegment(blockId, "node")}`;
@@ -342,6 +419,32 @@ export function quarantineUncommittedWorktreeEdits(root, worktreeRoot, branch, r
     }
     return quarantineFailedNodeCommit(root, branch, runId, blockId);
 }
+/**
+ * Point a node's durable quarantine ref straight at a captured commit OID, with no
+ * live branch dependency (INV-WTS-3/7 clobber recovery). Used when a concurrent
+ * sweep/accept has already reset or deleted the node's branch ref toward base so
+ * `quarantineFailedNodeCommit` (which rev-parses the branch) can no longer resolve
+ * the work — the captured OID from the node's own accept-outcome is still a
+ * reachable commit object, so preserving it here keeps the honest committed work
+ * recoverable instead of silently lost. Best-effort; returns the ref + commit, or
+ * null when the update-ref failed.
+ */
+export function quarantineCommitByOid(root, runId, blockId, commitOid) {
+    if (!commitOid)
+        return null;
+    const ref = quarantineRef(runId, blockId);
+    const upd = spawnSyncHidden("git", ["update-ref", ref, commitOid], {
+        cwd: root,
+        encoding: "utf8",
+        shell: false,
+    });
+    if (upd.status !== 0) {
+        process.stderr.write(`[remediate-code] could not quarantine ${blockId} commit ${commitOid.slice(0, 8)}: ${(upd.stderr ?? "").trim()}\n`);
+        return null;
+    }
+    process.stderr.write(`[remediate-code] preserved clobbered node ${blockId} commit ${commitOid.slice(0, 8)} at ${ref} for recovery\n`);
+    return { ref, commit: commitOid };
+}
 /** Clear a node's quarantine ref (e.g. once a later re-dispatch landed successfully). Best-effort. */
 export function clearQuarantinedCommit(root, runId, blockId) {
     spawnSyncHidden("git", ["update-ref", "-d", quarantineRef(runId, blockId)], {

package/dist/remediate/steps/dispatch/worktreeLifecycle.js.map

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package/dist/remediate/steps/dispatch.d.ts

@@ -1,11 +1,11 @@
 export type { DispatchOptions, GitEditedFiles, GitBranchHunk, GitBranchHunks, } from "./dispatch/common.js";
-export { gitTopLevel, worktreeBranchForBlock, gitEditedFilesForBranch, gitHunksForBranch, parseUnifiedDiffHunks, writeScopeViolations, detectRepoConventionsCache, } from "./dispatch/common.js";
+export { gitTopLevel, worktreeBranchForBlock, gitEditedFilesForBranch, gitHunksForBranch, gitCommitIsAncestor, gitBranchExists, parseUnifiedDiffHunks, writeScopeViolations, detectRepoConventionsCache, } from "./dispatch/common.js";
 export type { DagNodeFields } from "./dispatch/dagNodeFields.js";
 export type { HostConcurrencyLimit } from "audit-tools/shared";
 export { resolveHostActiveSubagentLimit, detectHostConcurrencyFromEnv, normalizeSlotTokens, resolveHostConcurrencyLimit, scheduleWave, buildConfirmedPools, buildDispatchQuota, } from "./dispatch/waveScheduling.js";
 export type { ScheduleWaveInput, WaveScheduleResult, } from "./dispatch/waveScheduling.js";
 export type { WorktreeVerifyResult } from "./dispatch/worktreeLifecycle.js";
-export { createWorktree, seedUntrackedDeclaredPaths, removeWorktree, resetNodeWorktreeAndBranch, verifyNodeInWorktree, mergeWorktree, dirtyMainTreeCollisions, rebaseBranchOntoHead, worktreePath, remediationBranchName, baseBranchLockPath, quarantineRef, quarantineFailedNodeCommit, quarantineUncommittedWorktreeEdits, clearQuarantinedCommit, listQuarantinedCommits, remediationBaseBranchPath, readRemediationBaseBranch, ensureRemediationBranchCheckedOut, commitWorktree, ensureWorktreeNodeModules, } from "./dispatch/worktreeLifecycle.js";
+export { createWorktree, seedUntrackedDeclaredPaths, removeWorktree, resetNodeWorktreeAndBranch, verifyNodeInWorktree, mergeWorktree, dirtyMainTreeCollisions, rebaseBranchOntoHead, worktreePath, remediationBranchName, baseBranchLockPath, worktreeNodeLockPath, quarantineRef, quarantineFailedNodeCommit, quarantineCommitByOid, quarantineUncommittedWorktreeEdits, clearQuarantinedCommit, listQuarantinedCommits, remediationBaseBranchPath, readRemediationBaseBranch, ensureRemediationBranchCheckedOut, commitWorktree, ensureWorktreeNodeModules, } from "./dispatch/worktreeLifecycle.js";
 export type { NodeWorkerOutcome, AcceptNodeWorktreeParams, AcceptNodeWorktreeResult, WorktreeNodeWorker, NodeWorktreeExecution, } from "./dispatch/acceptNode.js";
 export { acceptNodeWorktree, nodeAcceptOutcomePath, recordNodeAcceptOutcome, loadNodeAcceptOutcome, executeNodeInWorktree, } from "./dispatch/acceptNode.js";
 export { isBuildFreeVerifyCommand, normalizeNodeTestCommand, isWholeSuiteTestCommand, pathTokensInCommand, selfContainedVerifyCommands, verifyCommandsForEdits, deriveVerifyCommandsFromBranch, targetedCommandsForBlock, } from "./dispatch/verifyCommands.js";

package/dist/remediate/steps/dispatch.d.ts.map

@@ -1 +1 @@
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package/dist/remediate/steps/dispatch.js

@@ -7,9 +7,9 @@
 // unchanged. New code may import directly from the submodules; the barrel is the
 // backwards-compatible aggregate.
 // ---------------------------------------------------------------------------
-export { gitTopLevel, worktreeBranchForBlock, gitEditedFilesForBranch, gitHunksForBranch, parseUnifiedDiffHunks, writeScopeViolations, detectRepoConventionsCache, } from "./dispatch/common.js";
+export { gitTopLevel, worktreeBranchForBlock, gitEditedFilesForBranch, gitHunksForBranch, gitCommitIsAncestor, gitBranchExists, parseUnifiedDiffHunks, writeScopeViolations, detectRepoConventionsCache, } from "./dispatch/common.js";
 export { resolveHostActiveSubagentLimit, detectHostConcurrencyFromEnv, normalizeSlotTokens, resolveHostConcurrencyLimit, scheduleWave, buildConfirmedPools, buildDispatchQuota, } from "./dispatch/waveScheduling.js";
-export { createWorktree, seedUntrackedDeclaredPaths, removeWorktree, resetNodeWorktreeAndBranch, verifyNodeInWorktree, mergeWorktree, dirtyMainTreeCollisions, rebaseBranchOntoHead, worktreePath, remediationBranchName, baseBranchLockPath, quarantineRef, quarantineFailedNodeCommit, quarantineUncommittedWorktreeEdits, clearQuarantinedCommit, listQuarantinedCommits, remediationBaseBranchPath, readRemediationBaseBranch, ensureRemediationBranchCheckedOut, commitWorktree, ensureWorktreeNodeModules, } from "./dispatch/worktreeLifecycle.js";
+export { createWorktree, seedUntrackedDeclaredPaths, removeWorktree, resetNodeWorktreeAndBranch, verifyNodeInWorktree, mergeWorktree, dirtyMainTreeCollisions, rebaseBranchOntoHead, worktreePath, remediationBranchName, baseBranchLockPath, worktreeNodeLockPath, quarantineRef, quarantineFailedNodeCommit, quarantineCommitByOid, quarantineUncommittedWorktreeEdits, clearQuarantinedCommit, listQuarantinedCommits, remediationBaseBranchPath, readRemediationBaseBranch, ensureRemediationBranchCheckedOut, commitWorktree, ensureWorktreeNodeModules, } from "./dispatch/worktreeLifecycle.js";
 export { acceptNodeWorktree, nodeAcceptOutcomePath, recordNodeAcceptOutcome, loadNodeAcceptOutcome, executeNodeInWorktree, } from "./dispatch/acceptNode.js";
 // --- verify commands ---
 export { isBuildFreeVerifyCommand, normalizeNodeTestCommand, isWholeSuiteTestCommand, pathTokensInCommand, selfContainedVerifyCommands, verifyCommandsForEdits, deriveVerifyCommandsFromBranch, targetedCommandsForBlock, } from "./dispatch/verifyCommands.js";

package/dist/remediate/steps/dispatch.js.map

@@ -1 +1 @@
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package/dist/remediate/steps/nextStep.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"nextStep.d.ts","sourceRoot":"","sources":["../../../src/remediate/steps/nextStep.ts"],"names":[],"mappings":"AAGA,OAAO,EAAc,KAAK,gBAAgB,EAAE,KAAK,gBAAgB,EAAE,MAAM,mBAAmB,CAAC;AAC7F,OAAO,KAAK,EAGV,gBAAgB,EAGjB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EAAuX,KAAK,sBAAsB,EAA8C,KAAK,iBAAiB,EAAE,KAAK,aAAa,EAAE,KAAK,oBAAoB,EAAE,KAAK,YAAY,EAAE,KAAK,yBAAyB,EAAE,KAAK,qBAAqB,EAAE,KAAK,YAAY,EAAqB,KAAK,sBAAsB,EAAE,KAAK,cAAc,EAAiJ,sBAAsB,EAA0P,KAAK,kBAAkB,EAAE,MAAM,oBAAoB,CAAC;AAOxoC,OAAO,EASL,KAAK,kBAAkB,EACxB,MAAM,eAAe,CAAC;AAQvB,OAAO,KAAK,EAAE,eAAe,EAAE,uBAAuB,EAAE,MAAM,YAAY,CAAC;AAE3E,OAAO,EACL,gBAAgB,EAChB,wBAAwB,EAEzB,MAAM,wBAAwB,CAAC;AAQhC,OAAO,EAKL,KAAK,UAAU,EAChB,MAAM,gBAAgB,CAAC;AAuCxB,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AAoB3D,MAAM,WAAW,eAAe;IAC9B,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,KAAK,CAAC,EAAE,MAAM,GAAG,MAAM,EAAE,CAAC;IAC1B,wBAAwB,CAAC,EAAE,OAAO,CAAC;IACnC,iBAAiB,CAAC,EAAE,MAAM,CAAC;IAC3B,iBAAiB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IAClC,gBAAgB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACjC,0EAA0E;IAC1E,UAAU,CAAC,EAAE,oBAAoB,EAAE,GAAG,IAAI,CAAC;IAC3C,2EAA2E;IAC3E,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IAC5B,eAAe,CAAC,EAAE,OAAO,CAAC;IAC1B,WAAW,CAAC,EAAE,OAAO,CAAC;IACtB;;;;;;;OAOG;IACH,oBAAoB,CAAC,EAAE,OAAO,CAAC;IAC/B;;;OAGG;IACH,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,aAAa,CAAC,EAAE,aAAa,GAAG,IAAI,CAAC;IACrC;;;;;;OAMG;IACH,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB;;;;;OAKG;IACH,eAAe,CAAC,EAAE,UAAU,CAAC;CAC9B;AAED,wBAAgB,6BAA6B,CAAC,OAAO,EAAE;IACrD,wBAAwB,CAAC,EAAE,OAAO,CAAC;IACnC,aAAa,CAAC,EAAE,aAAa,GAAG,IAAI,CAAC;IACrC,GAAG,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;CACzB,GAAG,OAAO,CAYV;AAED;;;;;GAKG;AACH,wBAAgB,qBAAqB,CAAC,OAAO,GAAE;IAC7C,aAAa,CAAC,EAAE,aAAa,GAAG,IAAI,CAAC;IACrC,GAAG,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;CACpB,GAAG,OAAO,CAQf;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,2BAA2B,CAAC,OAAO,EAAE;IACnD,aAAa,CAAC,EAAE,OAAO,CAAC;IACxB,aAAa,CAAC,EAAE,aAAa,GAAG,IAAI,CAAC;IACrC,GAAG,CAAC,EAAE,MAAM,CAAC,UAAU,CAAC;CACzB,GAAG,OAAO,CAQV;AAED,iFAAiF;AACjF,MAAM,WAAW,wBAAwB;IACvC,sBAAsB,CAAC,EAAE,OAAO,CAAC;IACjC,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,cAAc,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IAC/B,aAAa,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IAC9B,QAAQ,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AASD;;;;;;;;;;;;;GAaG;AACH,wBAAgB,uBAAuB,CACrC,QAAQ,EAAE,wBAAwB,GAAG,SAAS,EAC9C,SAAS,EAAE,gBAAgB,GAAG,SAAS,GACtC;IAAE,QAAQ,EAAE,gBAAgB,CAAC;IAAC,SAAS,EAAE,gBAAgB,CAAA;CAAE,CAuC7D;AA2KD,YAAY,EACV,eAAe,EACf,qBAAqB,GACtB,MAAM,gBAAgB,CAAC;AACxB,OAAO,EACL,YAAY,EACZ,qBAAqB,EACrB,0BAA0B,EAC1B,qBAAqB,EACrB,mBAAmB,GACpB,MAAM,gBAAgB,CAAC;AACxB,OAAO,EAAE,gBAAgB,EAAE,wBAAwB,EAAE,CAAC;AA+DtD;;;;;;;;;;;;;;;;;;GAkBG;AACH,wBAAgB,uBAAuB,CACrC,KAAK,EAAE,gBAAgB,GACtB,gBAAgB,EAAE,EAAE,CAoFtB;AAED;;;;;;;;;;;;;;;;;;GAkBG;AACH,wBAAgB,mBAAmB,CAAC,KAAK,EAAE,gBAAgB,GAAG,MAAM,GAAG,IAAI,CAa1E;AAED,0EAA0E;AAC1E,MAAM,MAAM,qBAAqB,GAAG,CAClC,KAAK,EAAE,gBAAgB,EACvB,IAAI,EAAE,YAAY,KACf,OAAO,CAAC,qBAAqB,CAAC;IAAE,QAAQ,EAAE,MAAM,CAAA;CAAE,CAAC,CAAC,CAAC;AAE1D,MAAM,WAAW,2BAA2B;IAC1C,kFAAkF;IAClF,cAAc,EAAE,YAAY,EAAE,CAAC;IAC/B,aAAa,EAAE,aAAa,CAAC;IAC7B,mFAAmF;IACnF,YAAY,EAAE,qBAAqB,CAAC;IACpC;;;;OAIG;IACH,0BAA0B,EAAE,MAAM,OAAO,CAAC,IAAI,CAAC,CAAC;IAChD,8EAA8E;IAC9E,cAAc,CAAC,EAAE,CAAC,KAAK,EAAE,gBAAgB,KAAK,MAAM,CAAC;IACrD,8EAA8E;IAC9E,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB;;;;;OAKG;IACH,aAAa,CAAC,EAAE,CAAC,KAAK,EAAE,gBAAgB,KAAK,MAAM,EAAE,CAAC;IACtD,2EAA2E;IAC3E,IAAI,CAAC,EAAE,MAAM,CAAC;IACd;;;;;;OAMG;IACH,WAAW,CAAC,EAAE,sBAAsB,CAAC;CACtC;AAED,MAAM,WAAW,0BAA0B;IACzC,kDAAkD;IAClD,MAAM,EAAE,KAAK,CAAC;QACZ,QAAQ,EAAE,MAAM,EAAE,CAAC;QACnB,OAAO,EAAE,qBAAqB,CAAC;YAAE,QAAQ,EAAE,MAAM,CAAA;SAAE,CAAC,EAAE,CAAC;KACxD,CAAC,CAAC;IACH,4FAA4F;IAC5F,QAAQ,EAAE,MAAM,CAAC;IACjB;;;;;;OAMG;IACH,QAAQ,CAAC,EAAE,yBAAyB,CAAC;CACtC;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,oBAAoB,CACxC,MAAM,EAAE,gBAAgB,EAAE,EAAE,EAC5B,OAAO,EAAE,2BAA2B,GACnC,OAAO,CAAC,0BAA0B,CAAC,CA+ErC;AAyBD,0GAA0G;AAC1G,MAAM,MAAM,0BAA0B,GAAG,CAAC,IAAI,EAAE;IAC9C,KAAK,EAAE,gBAAgB,CAAC;IACxB,IAAI,EAAE,YAAY,CAAC;IACnB,8DAA8D;IAC9D,YAAY,EAAE,MAAM,CAAC;IACrB,kEAAkE;IAClE,UAAU,EAAE,MAAM,CAAC;CACpB,KAAK,OAAO,CAAC,qBAAqB,CAAC;IAAE,QAAQ,EAAE,MAAM,CAAA;CAAE,CAAC,CAAC,CAAC;AAE3D,MAAM,WAAW,oCAAoC;IACnD,IAAI,EAAE,MAAM,CAAC;IACb,YAAY,EAAE,MAAM,CAAC;IACrB,KAAK,EAAE,MAAM,CAAC;IACd,aAAa,EAAE,aAAa,GAAG,IAAI,CAAC;IACpC;;;;;OAKG;IACH,YAAY,CAAC,EAAE,0BAA0B,CAAC;IAC1C,qFAAqF;IACrF,0BAA0B,EAAE,MAAM,OAAO,CAAC,IAAI,CAAC,CAAC;IAChD,uEAAuE;IACvE,WAAW,CAAC,EAAE;QACZ,iBAAiB,CAAC,EAAE,MAAM,CAAC;QAC3B,iBAAiB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;QAClC,gBAAgB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;QACjC,UAAU,CAAC,EAAE,oBAAoB,EAAE,GAAG,IAAI,CAAC;QAC3C,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;KAC7B,CAAC;CACH;AAED,MAAM,WAAW,mCAAmC;IAClD,0DAA0D;IAC1D,KAAK,EAAE,KAAK,CAAC;QACX,QAAQ,EAAE,MAAM,CAAC;QACjB,OAAO,EAAE,qBAAqB,CAAC;YAAE,QAAQ,EAAE,MAAM,CAAA;SAAE,CAAC,CAAC,SAAS,CAAC,CAAC;QAChE,aAAa,EAAE,OAAO,CAAC;QACvB,MAAM,EAAE,OAAO,CAAC;KACjB,CAAC,CAAC;IACH,uDAAuD;IACvD,QAAQ,EAAE,MAAM,CAAC;IACjB,0EAA0E;IAC1E,YAAY,EAAE,gBAAgB,CAAC,QAAQ,CAAC,CAAC;CAC1C;AAwDD;;;;;;;;;;;;GAYG;AACH,wBAAsB,6BAA6B,CACjD,OAAO,EAAE,oCAAoC,GAC5C,OAAO,CAAC,m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package/dist/remediate/steps/nextStep.js

@@ -205,7 +205,18 @@ function inputValues(input) {
 function resolveInputPaths(root, input) {
     const values = inputValues(input).filter((value) => value.trim().length > 0);
     if (values.length > 0) {
-        const checked = values.map((value) => resolve(root, value));
+        // First-wins dedup by resolved absolute path so a repeated `--input`
+        // (or two spellings of the same file) contributes a single source, keeping
+        // input order stable for the `input-NN` manifest labels.
+        const checked = [];
+        const seen = new Set();
+        for (const value of values) {
+            const resolved = resolve(root, value);
+            if (seen.has(resolved))
+                continue;
+            seen.add(resolved);
+            checked.push(resolved);
+        }
         const existing = checked.filter((candidate) => existsSync(candidate));
         return {
             supplied: true,