attocode 0.2.2 → 0.2.4

package/dist/src/main.js

@@ -37,7 +37,7 @@ import { ProviderAdapter, convertToolsFromRegistry } from './adapters.js';
 import { createStandardRegistry } from './tools/standard.js';
 // CLI and configuration
 import { parseArgs, showHelp, shouldUseTUI, VERSION } from './cli.js';
-import { loadUserConfig } from './config.js';
+import { loadConfig } from './config/index.js';
 // First-run and init command
 import { runInit } from './commands/init.js';
 import { isFirstRun, hasUsableProvider, getFirstRunMessage } from './first-run.js';
@@ -51,9 +51,11 @@ import { persistenceDebug } from './integrations/persistence.js';
 import { installProcessHandlers } from './core/process-handlers.js';
 // Health check system
 import { createHealthChecker, createFileSystemHealthCheck, createNetworkHealthCheck, formatHealthReport, } from './integrations/health-check.js';
+// Structured logger
+import { logger } from './integrations/logger.js';
 // Swarm mode support
 import { DEFAULT_SWARM_CONFIG, autoDetectWorkerModels } from './integrations/swarm/index.js';
-import { loadSwarmYamlConfig, parseSwarmYaml, yamlToSwarmConfig, mergeSwarmConfigs } from './integrations/swarm/swarm-config-loader.js';
+import { loadSwarmYamlConfig, parseSwarmYaml, yamlToSwarmConfig, mergeSwarmConfigs, normalizeSwarmModelConfig } from './integrations/swarm/swarm-config-loader.js';
 import { readFileSync } from 'node:fs';
 /**
  * Build a SwarmConfig from CLI args.
@@ -76,7 +78,7 @@ async function buildSwarmConfig(swarmArg, orchestratorModel, resumeSessionId, pa
             }
         }
         catch (err) {
-            console.warn(`[Swarm] Failed to load config from ${swarmArg}: ${err.message}`);
+            logger.warn('[Swarm] Failed to load config', { path: swarmArg, error: String(err.message) });
         }
     }
     else {
@@ -86,24 +88,65 @@ async function buildSwarmConfig(swarmArg, orchestratorModel, resumeSessionId, pa
             yamlConfig = yamlToSwarmConfig(rawYaml, orchestratorModel);
         }
     }
+    // Resolve 'latest' session ID before merge
+    let resolvedResumeId = resumeSessionId;
+    if (resolvedResumeId === 'latest') {
+        try {
+            const { SwarmStateStore } = await import('./integrations/swarm/swarm-state-store.js');
+            const stateDir = '.agent/swarm-state';
+            const sessions = SwarmStateStore.listSessions(stateDir);
+            if (sessions.length > 0) {
+                resolvedResumeId = sessions[0].sessionId;
+                logger.info('[Swarm] Resuming latest session', { sessionId: resolvedResumeId });
+            }
+            else {
+                logger.warn('[Swarm] No previous sessions found to resume — starting fresh');
+                resolvedResumeId = undefined;
+            }
+        }
+        catch {
+            logger.warn('[Swarm] Could not list sessions — starting fresh');
+            resolvedResumeId = undefined;
+        }
+    }
     // Merge: DEFAULT < yaml < CLI
     const config = mergeSwarmConfigs(DEFAULT_SWARM_CONFIG, yamlConfig, {
         paidOnly,
         orchestratorModel,
         orchestratorModelExplicit,
-        resumeSessionId,
+        resumeSessionId: resolvedResumeId,
     });
+    // Normalize malformed model IDs (e.g. anthropic/z-ai/glm-5 -> z-ai/glm-5).
+    const normalized = normalizeSwarmModelConfig(config);
+    if (normalized.warnings.length > 0) {
+        const mode = config.modelValidation?.mode ?? 'autocorrect';
+        const onInvalid = config.modelValidation?.onInvalid ?? 'warn';
+        if (mode === 'strict' || onInvalid === 'fail') {
+            throw new Error(`Invalid swarm model configuration:\n${normalized.warnings.join('\n')}`);
+        }
+        for (const warning of normalized.warnings) {
+            logger.warn('[Swarm] Model config adjusted', { warning });
+        }
+    }
+    const finalConfig = normalized.config;
     // V3: Pre-flight key check for rate limit awareness
     const apiKey = process.env.OPENROUTER_API_KEY;
     if (apiKey) {
         try {
             const { OpenRouterProvider } = await import('./providers/adapters/openrouter.js');
             const keyInfo = await OpenRouterProvider.checkKeyInfo(apiKey);
-            if (keyInfo.isPaid === false && !config.paidOnly) {
-                console.log('[Swarm] Free-tier API key detected — throttle will auto-adjust.');
+            if (!yamlConfig && paidOnly === undefined && keyInfo.isPaid === true) {
+                finalConfig.paidOnly = true;
+                if (!finalConfig.throttle) {
+                    finalConfig.throttle = 'paid';
+                }
+                logger.info('[Swarm] No swarm config found; defaulting to paid-only worker model selection for paid-tier key');
+            }
+            if (keyInfo.isPaid === false && !finalConfig.paidOnly) {
+                logger.info('[Swarm] Free-tier API key detected — throttle will auto-adjust.');
             }
             if (keyInfo.creditsRemaining !== undefined && keyInfo.creditsRemaining < 0.5) {
-                console.warn(`[Swarm] Low credits remaining: $${keyInfo.creditsRemaining.toFixed(2)}`);
+                logger.warn('[Swarm] Low credits remaining', { credits: `$${keyInfo.creditsRemaining.toFixed(2)}` });
             }
         }
         catch {
@@ -111,13 +154,13 @@ async function buildSwarmConfig(swarmArg, orchestratorModel, resumeSessionId, pa
         }
     }
     // Auto-detect workers if none configured
-    if (config.workers.length === 0) {
+    if (finalConfig.workers.length === 0) {
         if (apiKey) {
             try {
-                config.workers = await autoDetectWorkerModels({
+                finalConfig.workers = await autoDetectWorkerModels({
                     apiKey,
                     orchestratorModel,
-                    paidOnly: config.paidOnly,
+                    paidOnly: finalConfig.paidOnly,
                 });
             }
             catch {
@@ -125,15 +168,24 @@ async function buildSwarmConfig(swarmArg, orchestratorModel, resumeSessionId, pa
             }
         }
         // If still no workers, use hardcoded fallback
-        if (config.workers.length === 0) {
-            config.workers = await autoDetectWorkerModels({
+        if (finalConfig.workers.length === 0) {
+            finalConfig.workers = await autoDetectWorkerModels({
                 apiKey: '',
                 orchestratorModel,
-                paidOnly: config.paidOnly,
+                paidOnly: finalConfig.paidOnly,
             });
         }
     }
-    return config;
+    logger.info('[Swarm] Resolved config', {
+        orchestratorModel: finalConfig.orchestratorModel,
+        workerCount: finalConfig.workers.length,
+        workerModels: finalConfig.workers.map(w => w.model),
+        paidOnly: finalConfig.paidOnly ?? false,
+        throttle: finalConfig.throttle ?? false,
+        totalBudget: finalConfig.totalBudget,
+        maxCost: finalConfig.maxCost,
+    });
+    return finalConfig;
 }
 // =============================================================================
 // MAIN
@@ -147,6 +199,7 @@ async function main() {
         persistenceDebug.enable();
     }
     if (args.version) {
+        // eslint-disable-next-line no-console
         console.log(`attocode v${VERSION}`);
         return;
     }
@@ -161,13 +214,19 @@ async function main() {
     }
     // First-run check
     if (isFirstRun() && !hasUsableProvider()) {
+        // eslint-disable-next-line no-console
         console.log(getFirstRunMessage());
+        // eslint-disable-next-line no-console
         console.log('\nRun "attocode init" to set up.\n');
         process.exit(1);
     }
     const useTUI = shouldUseTUI(args);
-    // Load user config from ~/.config/attocode/config.json
-    const userConfig = loadUserConfig();
+    // Load user config (user-level + project-level, validated)
+    const { config: userConfig, warnings: configWarnings } = loadConfig();
+    for (const warn of configWarnings) {
+        logger.warn(`[Config] ${warn}`);
+    }
+    // eslint-disable-next-line no-console
     console.log('Detecting LLM provider...');
     // Merge provider resilience config with defaults
     const providerResilienceConfig = {
@@ -191,14 +250,15 @@ async function main() {
                 circuitBreaker: providerResilienceConfig.circuitBreaker,
                 fallback: providerResilienceConfig.fallbackChain,
                 onFallback: providerResilienceConfig.onFallback ?? ((from, to, error) => {
-                    console.log(`[Resilience] Falling back from ${from} to ${to}: ${error.message}`);
+                    logger.info('[Resilience] Falling back', { from, to, error: error.message });
                 }),
             });
             if (!('chatWithTools' in chain)) {
-                console.error('Provider does not support native tool use.');
+                logger.error('Provider does not support native tool use.');
                 process.exit(1);
             }
             provider = chain;
+            // eslint-disable-next-line no-console
             console.log(`+ Provider resilience: fallback chain enabled (${providerResilienceConfig.fallbackProviders.length + 1} providers)`);
         }
         else if (resilienceEnabled && providerResilienceConfig.circuitBreaker !== false) {
@@ -207,33 +267,36 @@ async function main() {
                 circuitBreaker: providerResilienceConfig.circuitBreaker,
             });
             if (!('chatWithTools' in resilientProvider)) {
-                console.error('Provider does not support native tool use.');
-                console.error('   Set OPENROUTER_API_KEY to use this application.');
+                logger.error('Provider does not support native tool use.');
+                logger.error('Set OPENROUTER_API_KEY to use this application.');
                 process.exit(1);
             }
             provider = resilientProvider;
+            // eslint-disable-next-line no-console
             console.log('+ Provider resilience: circuit breaker enabled');
         }
         else {
             // Use basic provider without resilience
             const baseProvider = await getProvider(preferredProvider);
             if (!('chatWithTools' in baseProvider)) {
-                console.error('Provider does not support native tool use.');
-                console.error('   Set OPENROUTER_API_KEY to use this application.');
+                logger.error('Provider does not support native tool use.');
+                logger.error('Set OPENROUTER_API_KEY to use this application.');
                 process.exit(1);
             }
             provider = baseProvider;
         }
     }
     catch (error) {
-        console.error('Failed to initialize provider:', error.message);
-        console.error('\nSet one of: OPENROUTER_API_KEY, ANTHROPIC_API_KEY, OPENAI_API_KEY');
+        logger.error('Failed to initialize provider', { error: String(error.message) });
+        logger.error('Set one of: OPENROUTER_API_KEY, ANTHROPIC_API_KEY, OPENAI_API_KEY');
         process.exit(1);
     }
     // Resolve model: CLI args > env var > user config > provider default
     const resolvedModel = args.model || process.env.OPENROUTER_MODEL || userConfig?.model || provider.defaultModel;
+    // eslint-disable-next-line no-console
     console.log(`+ Using ${provider.name} (${resolvedModel})`);
     if (args.trace) {
+        // eslint-disable-next-line no-console
         console.log(`+ Trace capture enabled -> .traces/`);
     }
     // Initialize health checker
@@ -241,7 +304,7 @@ async function main() {
         onStatusChange: (name, healthy, prev) => {
             // Only warn when something becomes unhealthy (not on initial check)
             if (!healthy && prev !== undefined) {
-                console.warn(`[Health] ${name} became unhealthy`);
+                logger.warn('[Health] Check became unhealthy', { name });
             }
         },
     });
@@ -255,20 +318,21 @@ async function main() {
     healthChecker.checkAll().then(report => {
         if (!report.healthy) {
             const unhealthy = report.checks.filter(c => !c.healthy).map(c => c.name);
-            console.warn(`[Health] Some checks failed: ${unhealthy.join(', ')}`);
+            logger.warn('[Health] Some checks failed', { unhealthy: unhealthy.join(', ') });
             if (args.debug) {
-                console.warn(formatHealthReport(report));
+                logger.warn(formatHealthReport(report));
             }
         }
         else if (args.debug) {
-            console.log(`[Health] All ${report.totalCount} checks passed`);
+            logger.debug('[Health] All checks passed', { totalCount: report.totalCount });
         }
     }).catch(err => {
         // Don't block startup on health check failure
         if (args.debug) {
-            console.warn('[Health] Initial check failed:', err.message);
+            logger.warn('[Health] Initial check failed', { error: String(err.message) });
         }
     });
+    // eslint-disable-next-line no-console
     console.log('');
     if (args.task) {
         // Single task mode (non-interactive)
@@ -283,6 +347,11 @@ async function main() {
             model: resolvedModel,
             maxIterations: args.maxIterations,
             humanInLoop: false, // Disable for non-interactive
+            executionPolicy: { defaultPolicy: 'allow' }, // No user to prompt in non-interactive mode
+            codebaseContext: {
+                enabled: true,
+                root: process.cwd(),
+            },
             swarm: swarmConfig || false,
             observability: args.trace ? {
                 enabled: true,
@@ -295,15 +364,21 @@ async function main() {
             } : undefined,
         });
         agent.subscribe(createEventDisplay());
+        // eslint-disable-next-line no-console
         console.log(`Task: ${args.task}\n`);
         const result = await agent.run(args.task);
+        // eslint-disable-next-line no-console
         console.log('\n' + '='.repeat(60));
+        // eslint-disable-next-line no-console
         console.log(result.success ? '+ Task completed' : '! Task incomplete');
+        // eslint-disable-next-line no-console
         console.log('='.repeat(60));
+        // eslint-disable-next-line no-console
         console.log(result.response || result.error);
         // Show trace file location if tracing was enabled
         const traceCollector = agent.getTraceCollector();
         if (traceCollector) {
+            // eslint-disable-next-line no-console
             console.log(`\nTrace saved to: .traces/`);
         }
         await agent.cleanup();
@@ -312,6 +387,7 @@ async function main() {
     else {
         // Interactive mode
         if (useTUI) {
+            // eslint-disable-next-line no-console
             console.log('Starting TUI mode (use --no-tui for readline)');
             await startTUIMode(provider, {
                 permissionMode: args.permission,
@@ -334,7 +410,7 @@ async function main() {
     }
 }
 main().catch((error) => {
-    console.error('Fatal error:', error);
+    logger.error('Fatal error', { error: String(error) });
     process.exit(1);
 });
 //# sourceMappingURL=main.js.map

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package/dist/src/modes/repl.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"repl.d.ts","sourceRoot":"","sources":["../../../src/modes/repl.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAQH,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,uBAAuB,CAAC;AAClE,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AA8CxD,MAAM,WAAW,WAAW;IAC1B,cAAc,CAAC,EAAE,cAAc,CAAC;IAChC,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,KAAK,CAAC,EAAE,OAAO,gCAAgC,EAAE,WAAW,CAAC;CAC9D;AAED;;GAEG;AACH,wBAAsB,mBAAmB,CACvC,QAAQ,EAAE,oBAAoB,EAC9B,OAAO,GAAE,WAAgB,GACxB,OAAO,CAAC,IAAI,CAAC,CAgbf"}
+{"version":3,"file":"repl.d.ts","sourceRoot":"","sources":["../../../src/modes/repl.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAQH,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,uBAAuB,CAAC;AAClE,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAoDxD,MAAM,WAAW,WAAW;IAC1B,cAAc,CAAC,EAAE,cAAc,CAAC;IAChC,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,KAAK,CAAC,EAAE,OAAO,gCAAgC,EAAE,WAAW,CAAC;CAC9D;AAED;;GAEG;AACH,wBAAsB,mBAAmB,CACvC,QAAQ,EAAE,oBAAoB,EAC9B,OAAO,GAAE,WAAgB,GACxB,OAAO,CAAC,IAAI,CAAC,CAqdf"}

package/dist/src/modes/repl.js

@@ -11,6 +11,7 @@ import { ProviderAdapter, convertToolsFromRegistry, createInteractiveApprovalHan
 import { createStandardRegistry } from '../tools/standard.js';
 import { SQLiteStore, createSQLiteStore, createSessionStore, createMCPClient, createCompactor, createMCPMetaTools, createDeadLetterQueue, } from '../integrations/index.js';
 import { initModelCache } from '../integrations/openrouter-pricing.js';
+import { DEFAULT_POLICY_ENGINE_CONFIG, DEFAULT_SANDBOX_CONFIG, } from '../defaults.js';
 import { persistenceDebug, saveCheckpointToStore, loadSessionState, } from '../integrations/persistence.js';
 import { createEventDisplay, createJunctureLogger } from '../tui/event-display.js';
 import { createTUIRenderer } from '../tui/index.js';
@@ -18,6 +19,8 @@ import { getMCPConfigPaths } from '../paths.js';
 import { showSessionPicker, showQuickPicker } from '../session-picker.js';
 import { registerCleanupResource } from '../core/process-handlers.js';
 import { handleCommand, createConsoleOutput } from '../commands/handler.js';
+import { logger } from '../integrations/logger.js';
+import { TUI_ROOT_BUDGET } from '../integrations/economics.js';
 // ANSI color helper
 const colors = {
     reset: '\x1b[0m',
@@ -72,6 +75,7 @@ export async function startProductionREPL(provider, options = {}) {
         tools,
         model,
         maxIterations,
+        budget: TUI_ROOT_BUDGET,
         memory: {
             enabled: true,
             types: { episodic: true, semantic: true, working: true },
@@ -105,13 +109,18 @@ export async function startProductionREPL(provider, options = {}) {
             } : undefined,
         },
         sandbox: {
+            ...DEFAULT_SANDBOX_CONFIG,
             enabled: true,
-            isolation: 'process',
-            allowedCommands: ['node', 'npm', 'npx', 'yarn', 'git', 'ls', 'cat', 'head', 'tail', 'grep', 'find', 'echo', 'pwd'],
-            blockedCommands: ['rm -rf /', 'sudo', 'chmod 777'],
-            resourceLimits: { timeout: 60000 },
+            resourceLimits: {
+                ...DEFAULT_SANDBOX_CONFIG.resourceLimits,
+                timeout: 60000,
+            },
             allowedPaths: [process.cwd(), process.env.HOME || '/Users', '/tmp'],
         },
+        policyEngine: {
+            ...DEFAULT_POLICY_ENGINE_CONFIG,
+            enabled: true,
+        },
         humanInLoop: {
             enabled: permissionMode === 'interactive',
             riskThreshold: 'high',
@@ -164,6 +173,7 @@ export async function startProductionREPL(provider, options = {}) {
     try {
         sessionStore = await createSQLiteStore({ baseDir: '.agent/sessions' });
         persistenceDebug.log('SQLite store created successfully');
+        // eslint-disable-next-line no-console
         console.log(c('+ SQLite session store initialized', 'green'));
         if (persistenceDebug.isEnabled()) {
             const sqliteStore = sessionStore;
@@ -174,7 +184,9 @@ export async function startProductionREPL(provider, options = {}) {
     }
     catch (sqliteError) {
         persistenceDebug.error('SQLite initialization failed', sqliteError);
+        // eslint-disable-next-line no-console
         console.log(c('! SQLite unavailable, using JSONL fallback', 'yellow'));
+        // eslint-disable-next-line no-console
         console.log(c(`   Error: ${sqliteError.message}`, 'dim'));
         sessionStore = await createSessionStore({ baseDir: '.agent/sessions' });
         persistenceDebug.log('JSONL store created as fallback');
@@ -203,7 +215,7 @@ export async function startProductionREPL(provider, options = {}) {
             for (const tool of loadedTools) {
                 agent.addTool(tool);
             }
-            console.log(c(`  + Dynamically loaded ${loadedTools.length} MCP tool(s)`, 'dim'));
+            logger.debug('Dynamically loaded MCP tools', { count: loadedTools.length });
         },
     });
     for (const metaTool of mcpMetaTools) {
@@ -212,9 +224,11 @@ export async function startProductionREPL(provider, options = {}) {
     // Show MCP status
     const mcpServers = mcpClient.listServers();
     if (mcpServers.length > 0) {
+        // eslint-disable-next-line no-console
         console.log(c(`MCP Servers: ${mcpServers.length} configured`, 'dim'));
         for (const srv of mcpServers) {
             const icon = srv.status === 'connected' ? '+' : srv.status === 'error' ? 'x' : 'o';
+            // eslint-disable-next-line no-console
             console.log(c(`  ${icon} ${srv.name} (${srv.status})${srv.toolCount > 0 ? ` - ${srv.toolCount} tools` : ''}`, 'dim'));
         }
     }
@@ -232,6 +246,7 @@ export async function startProductionREPL(provider, options = {}) {
                 resumedSession = true;
             }
             else if (fullResult.action === 'cancel') {
+                // eslint-disable-next-line no-console
                 console.log(c('Goodbye!', 'cyan'));
                 await mcpClient.cleanup();
                 await agent.cleanup();
@@ -267,6 +282,7 @@ export async function startProductionREPL(provider, options = {}) {
         if (dlq.isAvailable()) {
             const pending = dlq.getPending({ limit: 10 });
             if (pending.length > 0) {
+                // eslint-disable-next-line no-console
                 console.log(c(`[DLQ] ${pending.length} failed operation(s) pending retry`, 'yellow'));
             }
             // Wire DLQ to registry and MCP client
@@ -285,18 +301,24 @@ export async function startProductionREPL(provider, options = {}) {
                 plan: sessionState.plan,
                 memoryContext: sessionState.memoryContext,
             });
+            // eslint-disable-next-line no-console
             console.log(c(`+ Resumed ${sessionState.messages.length} messages from session`, 'green'));
         }
     }
     // Welcome banner
+    // eslint-disable-next-line no-console
     console.log(`
 ${c('----------------------------------------------------------------------', 'dim')}
 ${c('                    ATTOCODE - PRODUCTION CODING AGENT', 'bold')}
 ${c('----------------------------------------------------------------------', 'dim')}
 `);
+    // eslint-disable-next-line no-console
     console.log(c(`Session: ${sessionId}${resumedSession ? ' (resumed)' : ''}`, 'dim'));
+    // eslint-disable-next-line no-console
     console.log(c(`Model: ${model || provider.defaultModel}`, 'dim'));
+    // eslint-disable-next-line no-console
     console.log(c(`Permission mode: ${permissionMode}`, 'dim'));
+    // eslint-disable-next-line no-console
     console.log(c('\nType your request, or /help for commands.\n', 'dim'));
     // Create command context
     const commandOutput = createConsoleOutput();
@@ -307,8 +329,11 @@ ${c('----------------------------------------------------------------------', 'd
     if (trace && traceCollector) {
         await traceCollector.startSession(terminalSessionId, undefined, // No single task - this is a terminal session with multiple tasks
         model || provider.defaultModel, { type: 'repl', permissionMode });
+        // eslint-disable-next-line no-console
         console.log(c(`Trace session started: ${terminalSessionId}`, 'dim'));
     }
+    let hadRunFailure = false;
+    let lastFailureReason;
     try {
         while (true) {
             // Generate prompt with mode indicator
@@ -337,6 +362,7 @@ ${c('----------------------------------------------------------------------', 'd
                     rl,
                 });
                 if (result === 'quit') {
+                    // eslint-disable-next-line no-console
                     console.log(c('Goodbye!', 'cyan'));
                     break;
                 }
@@ -346,29 +372,37 @@ ${c('----------------------------------------------------------------------', 'd
             try {
                 const result = await agent.run(trimmed);
                 if (result.success) {
+                    // eslint-disable-next-line no-console
                     console.log(c('\n--- Assistant ---', 'magenta'));
                     tui.renderAssistantMessage(result.response);
+                    // eslint-disable-next-line no-console
                     console.log(c('-----------------', 'magenta'));
                 }
                 else {
+                    hadRunFailure = true;
+                    lastFailureReason = result.error || result.response || 'Task incomplete';
+                    // eslint-disable-next-line no-console
                     console.log(c('\n! Task incomplete:', 'yellow'));
                     tui.showError(result.error || result.response);
                 }
                 if (trace && agent.getTraceCollector()) {
-                    console.log(c('Trace captured -> .traces/', 'dim'));
+                    logger.debug('Trace captured', { outputDir: '.traces/' });
                 }
                 const metrics = result.metrics;
+                // eslint-disable-next-line no-console
                 console.log(c(`\nTokens: ${metrics.inputTokens} in / ${metrics.outputTokens} out | Tools: ${metrics.toolCalls} | Duration: ${metrics.duration}ms`, 'dim'));
                 if (agent.hasPendingPlan()) {
                     const changeCount = agent.getPendingChangeCount();
+                    // eslint-disable-next-line no-console
                     console.log(c(`\nPlan Mode: ${changeCount} change(s) queued for approval`, 'yellow'));
+                    // eslint-disable-next-line no-console
                     console.log(c('   Use /show-plan to review, /approve to execute, /reject to discard', 'dim'));
                 }
                 // Auto-checkpoint
                 persistenceDebug.log('Attempting auto-checkpoint');
                 const checkpoint = agent.autoCheckpoint(true);
                 if (checkpoint) {
-                    console.log(c(`Auto-checkpoint: ${checkpoint.id}`, 'dim'));
+                    logger.debug('Auto-checkpoint created', { checkpointId: checkpoint.id });
                     persistenceDebug.log('Auto-checkpoint created in agent', {
                         id: checkpoint.id,
                         label: checkpoint.label,
@@ -395,9 +429,7 @@ ${c('----------------------------------------------------------------------', 'd
                     }
                     catch (err) {
                         persistenceDebug.error('Failed to persist checkpoint to store', err);
-                        if (persistenceDebug.isEnabled()) {
-                            console.log(c(`! Checkpoint persistence failed: ${err.message}`, 'yellow'));
-                        }
+                        logger.error('Checkpoint persistence failed', { error: String(err) });
                     }
                 }
                 else {
@@ -405,8 +437,11 @@ ${c('----------------------------------------------------------------------', 'd
                 }
             }
             catch (error) {
+                hadRunFailure = true;
+                lastFailureReason = error.message;
                 tui.showError(error.message);
             }
+            // eslint-disable-next-line no-console
             console.log();
         }
     }
@@ -414,11 +449,14 @@ ${c('----------------------------------------------------------------------', 'd
         // End trace session for the terminal session
         if (trace && traceCollector?.isSessionActive()) {
             try {
-                await traceCollector.endSession({ success: true });
+                await traceCollector.endSession(hadRunFailure
+                    ? { success: false, failureReason: lastFailureReason ?? 'At least one task failed during this terminal session' }
+                    : { success: true });
+                // eslint-disable-next-line no-console
                 console.log(c(`\nTrace session ended -> .traces/`, 'dim'));
             }
             catch (err) {
-                console.log(c(`! Failed to end trace session: ${err.message}`, 'yellow'));
+                logger.error('Failed to end trace session', { error: String(err) });
             }
         }
         tui.cleanup();