arkaos 4.22.0 → 4.23.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (252) hide show
  1. package/THE-ARKAOS-GUIDE.md +72 -0
  2. package/VERSION +1 -1
  3. package/arka/SKILL.md +28 -6
  4. package/arka/skills/bootstrap-agent/SKILL.md +3 -2
  5. package/arka/skills/flow/SKILL.md +3 -2
  6. package/arka/skills/forge/SKILL.md +3 -2
  7. package/arka/skills/recipes/SKILL.md +3 -2
  8. package/arka/skills/refine/SKILL.md +3 -2
  9. package/arka/skills/research/SKILL.md +3 -2
  10. package/bin/arka-doctor +8 -0
  11. package/core/cognition/insights/store.py +15 -4
  12. package/core/forge/persistence.py +27 -9
  13. package/core/forge/schema.py +45 -22
  14. package/core/governance/evidence_checks.py +101 -9
  15. package/core/governance/kb_cite_check.py +16 -6
  16. package/core/governance/stop_lint.py +38 -11
  17. package/core/governance/stop_lint_telemetry.py +11 -2
  18. package/core/hooks/user_prompt_submit.py +21 -23
  19. package/core/synapse/engine.py +46 -16
  20. package/core/synapse/graph_context_layer.py +7 -2
  21. package/core/synapse/kb_cache.py +63 -16
  22. package/core/synapse/layers.py +93 -30
  23. package/core/synapse/layers_base.py +16 -0
  24. package/core/synapse/layers_kb.py +325 -19
  25. package/dashboard/app/layouts/default.vue +7 -0
  26. package/dashboard/app/pages/plan-canvas.vue +630 -0
  27. package/departments/brand/SKILL.md +3 -2
  28. package/departments/brand/skills/archetype-finder/SKILL.md +3 -2
  29. package/departments/brand/skills/colors/SKILL.md +3 -2
  30. package/departments/brand/skills/design-system/SKILL.md +3 -2
  31. package/departments/brand/skills/identity-system/SKILL.md +3 -2
  32. package/departments/brand/skills/logo-brief/SKILL.md +3 -2
  33. package/departments/brand/skills/mockup-generate/SKILL.md +3 -2
  34. package/departments/brand/skills/naming-evaluate/SKILL.md +3 -2
  35. package/departments/brand/skills/positioning-statement/SKILL.md +3 -2
  36. package/departments/brand/skills/primal-audit/SKILL.md +3 -2
  37. package/departments/brand/skills/ux-audit/SKILL.md +3 -2
  38. package/departments/brand/skills/voice-guide/SKILL.md +3 -2
  39. package/departments/brand/skills/wireframe/SKILL.md +3 -2
  40. package/departments/community/SKILL.md +3 -2
  41. package/departments/community/skills/ai-community/SKILL.md +3 -2
  42. package/departments/community/skills/betting-setup/SKILL.md +3 -2
  43. package/departments/community/skills/business-model/SKILL.md +3 -2
  44. package/departments/community/skills/content-calendar/SKILL.md +3 -2
  45. package/departments/community/skills/events-plan/SKILL.md +3 -2
  46. package/departments/community/skills/gamification-design/SKILL.md +3 -2
  47. package/departments/community/skills/growth-plan/SKILL.md +3 -2
  48. package/departments/community/skills/metrics-track/SKILL.md +3 -2
  49. package/departments/community/skills/moderation/SKILL.md +3 -2
  50. package/departments/community/skills/monetize-plan/SKILL.md +3 -2
  51. package/departments/community/skills/niche-setup/SKILL.md +3 -2
  52. package/departments/community/skills/onboarding-flow/SKILL.md +3 -2
  53. package/departments/community/skills/platform-select/SKILL.md +3 -2
  54. package/departments/content/SKILL.md +3 -2
  55. package/departments/content/skills/ai-workflow/SKILL.md +3 -2
  56. package/departments/content/skills/analytics/SKILL.md +3 -2
  57. package/departments/content/skills/calendar/SKILL.md +3 -2
  58. package/departments/content/skills/content-system/SKILL.md +3 -2
  59. package/departments/content/skills/monetization-plan/SKILL.md +3 -2
  60. package/departments/content/skills/newsletter-write/SKILL.md +3 -2
  61. package/departments/content/skills/platform-optimize/SKILL.md +3 -2
  62. package/departments/content/skills/repurpose-plan/SKILL.md +3 -2
  63. package/departments/content/skills/research-compile/SKILL.md +3 -2
  64. package/departments/content/skills/script-structure/SKILL.md +3 -2
  65. package/departments/content/skills/short-form/SKILL.md +3 -2
  66. package/departments/content/skills/thumbnail-package/SKILL.md +3 -2
  67. package/departments/content/skills/trend-hunt/SKILL.md +3 -2
  68. package/departments/content/skills/video-produce/SKILL.md +3 -2
  69. package/departments/content/skills/video-setup/SKILL.md +3 -2
  70. package/departments/content/skills/viral-design/SKILL.md +3 -2
  71. package/departments/content/skills/youtube-strategy/SKILL.md +3 -2
  72. package/departments/dev/SKILL.md +3 -2
  73. package/departments/dev/skills/ai-assisted-dev/SKILL.md +3 -2
  74. package/departments/dev/skills/animated-website/SKILL.md +7 -0
  75. package/departments/dev/skills/architecture-design/SKILL.md +3 -2
  76. package/departments/dev/skills/code-review/SKILL.md +3 -2
  77. package/departments/dev/skills/db-design/SKILL.md +3 -2
  78. package/departments/dev/skills/ddd-model/SKILL.md +3 -2
  79. package/departments/dev/skills/demo-gif/SKILL.md +3 -2
  80. package/departments/dev/skills/deploy/SKILL.md +3 -2
  81. package/departments/dev/skills/devops-pipeline/SKILL.md +3 -2
  82. package/departments/dev/skills/docs/SKILL.md +3 -2
  83. package/departments/dev/skills/mcp/SKILL.md +3 -2
  84. package/departments/dev/skills/performance-audit/SKILL.md +3 -2
  85. package/departments/dev/skills/refactor-plan/SKILL.md +3 -2
  86. package/departments/dev/skills/research/SKILL.md +3 -2
  87. package/departments/dev/skills/security-compliance/SKILL.md +3 -2
  88. package/departments/dev/skills/stack-check/SKILL.md +3 -2
  89. package/departments/ecom/SKILL.md +3 -2
  90. package/departments/ecom/skills/analytics/SKILL.md +3 -2
  91. package/departments/ecom/skills/browse-competitor/SKILL.md +3 -2
  92. package/departments/ecom/skills/cart-recovery/SKILL.md +3 -2
  93. package/departments/ecom/skills/cro-optimize/SKILL.md +3 -2
  94. package/departments/ecom/skills/customer-journey/SKILL.md +3 -2
  95. package/departments/ecom/skills/fulfillment-plan/SKILL.md +3 -2
  96. package/departments/ecom/skills/marketplace-manage/SKILL.md +3 -2
  97. package/departments/ecom/skills/pricing-strategy/SKILL.md +3 -2
  98. package/departments/ecom/skills/product-launch/SKILL.md +3 -2
  99. package/departments/ecom/skills/rfm-segment/SKILL.md +3 -2
  100. package/departments/ecom/skills/social-commerce/SKILL.md +3 -2
  101. package/departments/ecom/skills/store-audit/SKILL.md +3 -2
  102. package/departments/ecom/skills/subscription-model/SKILL.md +3 -2
  103. package/departments/finance/SKILL.md +3 -2
  104. package/departments/finance/skills/budget-plan/SKILL.md +3 -2
  105. package/departments/finance/skills/cashflow-forecast/SKILL.md +3 -2
  106. package/departments/finance/skills/ciso-advisor/SKILL.md +3 -2
  107. package/departments/finance/skills/financial-model/SKILL.md +3 -2
  108. package/departments/finance/skills/pitch-deck/SKILL.md +3 -2
  109. package/departments/finance/skills/scenario-analysis/SKILL.md +3 -2
  110. package/departments/finance/skills/unit-economics/SKILL.md +3 -2
  111. package/departments/finance/skills/valuation-model/SKILL.md +3 -2
  112. package/departments/kb/SKILL.md +3 -2
  113. package/departments/kb/skills/ai-research/SKILL.md +3 -2
  114. package/departments/kb/skills/competitive-intel/SKILL.md +3 -2
  115. package/departments/kb/skills/doc-extraction/SKILL.md +3 -2
  116. package/departments/kb/skills/doc-redaction/SKILL.md +3 -2
  117. package/departments/kb/skills/knowledge-ops/SKILL.md +3 -2
  118. package/departments/kb/skills/knowledge-review/SKILL.md +3 -2
  119. package/departments/kb/skills/learn-content/SKILL.md +3 -2
  120. package/departments/kb/skills/moc-create/SKILL.md +3 -2
  121. package/departments/kb/skills/persona-build/SKILL.md +3 -2
  122. package/departments/kb/skills/research-plan/SKILL.md +3 -2
  123. package/departments/kb/skills/search-kb/SKILL.md +3 -2
  124. package/departments/kb/skills/source-evaluate/SKILL.md +3 -2
  125. package/departments/kb/skills/taxonomy-manage/SKILL.md +3 -2
  126. package/departments/kb/skills/write-as-persona/SKILL.md +3 -2
  127. package/departments/landing/SKILL.md +3 -2
  128. package/departments/landing/skills/ab-test/SKILL.md +3 -2
  129. package/departments/landing/skills/affiliate-bridge/SKILL.md +3 -2
  130. package/departments/landing/skills/awareness-diagnose/SKILL.md +3 -2
  131. package/departments/landing/skills/email-sequence/SKILL.md +3 -2
  132. package/departments/landing/skills/funnel-metrics/SKILL.md +3 -2
  133. package/departments/landing/skills/headline-write/SKILL.md +3 -2
  134. package/departments/landing/skills/launch-sequence/SKILL.md +3 -2
  135. package/departments/landing/skills/offer-create/SKILL.md +3 -2
  136. package/departments/landing/skills/optimize-page/SKILL.md +3 -2
  137. package/departments/landing/skills/page-architect/SKILL.md +3 -2
  138. package/departments/landing/skills/persuasion-apply/SKILL.md +3 -2
  139. package/departments/landing/skills/webinar-funnel/SKILL.md +3 -2
  140. package/departments/leadership/SKILL.md +3 -2
  141. package/departments/leadership/skills/change-manage/SKILL.md +3 -2
  142. package/departments/leadership/skills/conflict-resolve/SKILL.md +3 -2
  143. package/departments/leadership/skills/culture-audit/SKILL.md +3 -2
  144. package/departments/leadership/skills/delegation-matrix/SKILL.md +3 -2
  145. package/departments/leadership/skills/disc-assess/SKILL.md +3 -2
  146. package/departments/leadership/skills/feedback-give/SKILL.md +3 -2
  147. package/departments/leadership/skills/hiring-plan/SKILL.md +3 -2
  148. package/departments/leadership/skills/performance-review/SKILL.md +3 -2
  149. package/departments/marketing/SKILL.md +3 -2
  150. package/departments/marketing/skills/ab-test/SKILL.md +3 -2
  151. package/departments/marketing/skills/analytics-report/SKILL.md +3 -2
  152. package/departments/marketing/skills/audience-segment/SKILL.md +3 -2
  153. package/departments/marketing/skills/calendar-plan/SKILL.md +3 -2
  154. package/departments/marketing/skills/competitor-analysis/SKILL.md +3 -2
  155. package/departments/marketing/skills/content-audit/SKILL.md +3 -2
  156. package/departments/marketing/skills/email-sequence/SKILL.md +3 -2
  157. package/departments/marketing/skills/growth-loop/SKILL.md +3 -2
  158. package/departments/marketing/skills/marketing-automation/SKILL.md +3 -2
  159. package/departments/marketing/skills/paid-campaign/SKILL.md +3 -2
  160. package/departments/marketing/skills/programmatic-seo/SKILL.md +3 -2
  161. package/departments/marketing/skills/seo-audit/SKILL.md +3 -2
  162. package/departments/marketing/skills/social-strategy/SKILL.md +3 -2
  163. package/departments/ops/SKILL.md +3 -2
  164. package/departments/ops/skills/bottleneck-find/SKILL.md +3 -2
  165. package/departments/ops/skills/dashboard-build/SKILL.md +3 -2
  166. package/departments/ops/skills/gdpr-compliance/SKILL.md +3 -2
  167. package/departments/ops/skills/github-ops/SKILL.md +3 -2
  168. package/departments/ops/skills/gtd-setup/SKILL.md +3 -2
  169. package/departments/ops/skills/integration-design/SKILL.md +3 -2
  170. package/departments/ops/skills/iso27001/SKILL.md +3 -2
  171. package/departments/ops/skills/lean-audit/SKILL.md +3 -2
  172. package/departments/ops/skills/metrics-dashboard/SKILL.md +3 -2
  173. package/departments/ops/skills/n8n-flow/SKILL.md +3 -2
  174. package/departments/ops/skills/quality-management/SKILL.md +3 -2
  175. package/departments/ops/skills/risk-management/SKILL.md +3 -2
  176. package/departments/ops/skills/soc2-compliance/SKILL.md +3 -2
  177. package/departments/ops/skills/sop-create/SKILL.md +3 -2
  178. package/departments/ops/skills/terminal-ops/SKILL.md +3 -2
  179. package/departments/ops/skills/workflow-automate/SKILL.md +3 -2
  180. package/departments/ops/skills/zapier-flow/SKILL.md +3 -2
  181. package/departments/org/SKILL.md +3 -2
  182. package/departments/org/skills/compensation-plan/SKILL.md +3 -2
  183. package/departments/org/skills/culture-define/SKILL.md +3 -2
  184. package/departments/org/skills/decision-framework/SKILL.md +3 -2
  185. package/departments/org/skills/hiring-plan/SKILL.md +3 -2
  186. package/departments/org/skills/meeting-optimize/SKILL.md +3 -2
  187. package/departments/org/skills/onboarding-design/SKILL.md +3 -2
  188. package/departments/org/skills/org-design/SKILL.md +3 -2
  189. package/departments/org/skills/remote-setup/SKILL.md +3 -2
  190. package/departments/org/skills/sop-process/SKILL.md +3 -2
  191. package/departments/org/skills/team-assess/SKILL.md +3 -2
  192. package/departments/pm/SKILL.md +3 -2
  193. package/departments/pm/skills/backlog-groom/SKILL.md +3 -2
  194. package/departments/pm/skills/discovery-plan/SKILL.md +3 -2
  195. package/departments/pm/skills/estimate-forecast/SKILL.md +3 -2
  196. package/departments/pm/skills/impact-map/SKILL.md +3 -2
  197. package/departments/pm/skills/kanban-setup/SKILL.md +3 -2
  198. package/departments/pm/skills/risk-register/SKILL.md +3 -2
  199. package/departments/pm/skills/roadmap-build/SKILL.md +3 -2
  200. package/departments/pm/skills/sprint-plan/SKILL.md +3 -2
  201. package/departments/pm/skills/stakeholder-map/SKILL.md +3 -2
  202. package/departments/pm/skills/standup-run/SKILL.md +3 -2
  203. package/departments/pm/skills/story-write/SKILL.md +3 -2
  204. package/departments/saas/SKILL.md +3 -2
  205. package/departments/saas/skills/benchmark-compare/SKILL.md +3 -2
  206. package/departments/saas/skills/churn-analysis/SKILL.md +3 -2
  207. package/departments/saas/skills/customer-success/SKILL.md +3 -2
  208. package/departments/saas/skills/growth-plan/SKILL.md +3 -2
  209. package/departments/saas/skills/gtm-strategy/SKILL.md +3 -2
  210. package/departments/saas/skills/launch-execute/SKILL.md +3 -2
  211. package/departments/saas/skills/metrics-dashboard/SKILL.md +3 -2
  212. package/departments/saas/skills/micro-saas-stack/SKILL.md +3 -2
  213. package/departments/saas/skills/mvp-build/SKILL.md +3 -2
  214. package/departments/saas/skills/niche-evaluate/SKILL.md +3 -2
  215. package/departments/saas/skills/onboarding-optimize/SKILL.md +3 -2
  216. package/departments/saas/skills/plg-setup/SKILL.md +3 -2
  217. package/departments/saas/skills/pricing-strategy/SKILL.md +3 -2
  218. package/departments/saas/skills/validate-idea/SKILL.md +3 -2
  219. package/departments/sales/SKILL.md +3 -2
  220. package/departments/sales/skills/challenger-sell/SKILL.md +3 -2
  221. package/departments/sales/skills/deal-qualify/SKILL.md +3 -2
  222. package/departments/sales/skills/discovery-call/SKILL.md +3 -2
  223. package/departments/sales/skills/forecast-revenue/SKILL.md +3 -2
  224. package/departments/sales/skills/negotiate-plan/SKILL.md +3 -2
  225. package/departments/sales/skills/objection-handle/SKILL.md +3 -2
  226. package/departments/sales/skills/pipeline-manage/SKILL.md +3 -2
  227. package/departments/sales/skills/pricing-negotiate/SKILL.md +3 -2
  228. package/departments/strategy/SKILL.md +3 -2
  229. package/departments/strategy/skills/blue-ocean/SKILL.md +3 -2
  230. package/departments/strategy/skills/bmc/SKILL.md +3 -2
  231. package/departments/strategy/skills/board-advisor/SKILL.md +3 -2
  232. package/departments/strategy/skills/cto-advisor/SKILL.md +3 -2
  233. package/departments/strategy/skills/extract-data/SKILL.md +3 -2
  234. package/departments/strategy/skills/five-forces/SKILL.md +3 -2
  235. package/departments/strategy/skills/growth-strategy/SKILL.md +3 -2
  236. package/departments/strategy/skills/moat-analysis/SKILL.md +3 -2
  237. package/departments/strategy/skills/position/SKILL.md +3 -2
  238. package/departments/strategy/skills/scenario-plan/SKILL.md +3 -2
  239. package/installer/config-seed.js +81 -25
  240. package/installer/graphify.js +340 -0
  241. package/installer/index.js +8 -1
  242. package/installer/keys.js +18 -3
  243. package/installer/update.js +8 -1
  244. package/knowledge/skills-manifest.json +1 -1
  245. package/mcps/registry.json +9 -9
  246. package/mcps/scripts/apply-mcps.sh +6 -2
  247. package/package.json +2 -1
  248. package/pyproject.toml +1 -1
  249. package/scripts/dashboard-api.py +336 -124
  250. package/scripts/guide_gen.py +139 -0
  251. package/scripts/migrate_skills_kb_first.py +3 -2
  252. package/scripts/synapse-bridge.py +9 -1
@@ -20,6 +20,15 @@ from dataclasses import dataclass
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20
 
21
21
  _WIKILINK_PATTERN: re.Pattern[str] = re.compile(r"\[\[([^\[\]]+)\]\]")
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22
  _KNOWLEDGE_PATTERN: re.Pattern[str] = re.compile(r"\[knowledge:", re.IGNORECASE)
23
+ # Graphify knowledge-graph citation: the `[graph:` marker ONLY (parallel to
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+ # `[knowledge:`), which stands for a node actually returned by the graph.
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+ # The tool NAME is deliberately excluded: naming a tool is narration, not
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+ # evidence, and the literal `mcp__graphify__query_graph` appears in the
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+ # KB-first pointer of every migrated SKILL.md — crediting it would let any
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+ # response that merely echoes the doctrine self-certify. Same asymmetry as
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+ # `mcp__obsidian`, which is a topic keyword and earns credit only via a real
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+ # `[[wikilink]]`.
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+ _GRAPHIFY_PATTERN: re.Pattern[str] = re.compile(r"\[graph:", re.IGNORECASE)
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  # File:line — requires at least one path separator. Quantifiers are bounded
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  # to prevent catastrophic backtracking on pathological input (PR18 security
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  # review: unbounded variant blew past Stop's 5s budget by ~8x on 100KB of
@@ -41,8 +50,8 @@ _ARKAOS_KEYWORDS: frozenset[str] = frozenset({
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  "ines", "rafael", "beatriz", "miguel", "rodrigo",
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  "non-negotiable", "tier 0", "squad lead",
43
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  "core/governance", "core/synapse", "core/cognition",
44
- "core/workflow", "mcp__obsidian", "kb-first",
45
- "departments/", "agent yaml", "obsidian vault",
53
+ "core/workflow", "mcp__obsidian", "mcp__graphify", "kb-first",
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+ "departments/", "agent yaml", "obsidian vault", "graphify",
46
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  })
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  _BYPASS_DEFAULTS: tuple[str, ...] = ("[arka:trivial]",)
@@ -50,8 +59,8 @@ _TRIVIAL_WORD_THRESHOLD: int = 15
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  _TOPIC_THRESHOLD: float = 0.4
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  _SUGGESTION_TEXT: str = (
52
61
  "KB-first — last response had no citation on ArkaOS topic. "
53
- "Use @[[note-name]], /kb search, or mcp__obsidian__search_notes "
54
- "to ground the next answer."
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+ "Use @[[note-name]], /kb search, mcp__obsidian__search_notes, or "
63
+ "mcp__graphify__query_graph to ground the next answer."
55
64
  )
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@@ -111,13 +120,14 @@ def _is_trivial_length(text: str) -> bool:
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120
  def _count_citations(text: str) -> int:
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121
  # Truncate to _MAX_SCAN_CHARS first; the file-line regex is the only
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  # backtracking-prone pattern and the bounded quantifiers (capped at 8
114
- # segments × 64 chars each) combined with this slice make all three
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+ # segments x 64 chars each) combined with this slice make all three
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  # patterns safe to run unconditionally below.
116
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  scan = text if len(text) <= _MAX_SCAN_CHARS else text[:_MAX_SCAN_CHARS]
117
126
  wikilinks = len(_WIKILINK_PATTERN.findall(scan))
118
127
  knowledge = 1 if _KNOWLEDGE_PATTERN.search(scan) else 0
128
+ graphify = 1 if _GRAPHIFY_PATTERN.search(scan) else 0
119
129
  files = len(_FILE_LINE_PATTERN.findall(scan))
120
- return wikilinks + knowledge + files
130
+ return wikilinks + knowledge + graphify + files
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123
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  def _compute_topic_score(text: str, keywords: frozenset[str]) -> float:
@@ -84,6 +84,29 @@ def _git(args: list[str], cwd: Path) -> subprocess.CompletedProcess | None:
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  return None
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87
+ def _porcelain_entries(stdout: str) -> list[tuple[str, str]]:
88
+ """(status, path) pairs from ``git status --porcelain -z`` output.
89
+
90
+ ``-z`` terminates entries with NUL and never quotes paths (the
91
+ line-based form octal-escapes non-ASCII and quoted names, which
92
+ broke path matching). Rename/copy entries carry a second
93
+ NUL-separated field — the original path — which is skipped.
94
+ """
95
+ entries: list[tuple[str, str]] = []
96
+ tokens = stdout.split("\0")
97
+ index = 0
98
+ while index < len(tokens):
99
+ token = tokens[index]
100
+ index += 1
101
+ if len(token) < 4:
102
+ continue
103
+ status, path = token[:2], token[3:]
104
+ if status[0] in "RC":
105
+ index += 1 # skip the original-path field
106
+ entries.append((status, path))
107
+ return entries
108
+
109
+
87
110
  def changed_files(project_dir: Path) -> list[str]:
88
111
  """Repo-relative files changed vs the merge-base, plus untracked."""
89
112
  try:
@@ -93,15 +116,15 @@ def changed_files(project_dir: Path) -> list[str]:
93
116
  if base is None:
94
117
  return []
95
118
  out: list[str] = []
96
- diff = _git(["diff", "--name-only", base], project_dir)
119
+ diff = _git(["diff", "--name-only", "-z", base], project_dir)
97
120
  if diff is not None and diff.returncode == 0:
98
- out.extend(f.strip() for f in diff.stdout.splitlines() if f.strip())
99
- status = _git(["status", "--porcelain"], project_dir)
121
+ out.extend(f for f in diff.stdout.split("\0") if f.strip())
122
+ status = _git(["status", "--porcelain", "-z"], project_dir)
100
123
  if status is not None and status.returncode == 0:
101
124
  out.extend(
102
- line[3:].strip()
103
- for line in status.stdout.splitlines()
104
- if line.startswith("??") and line[3:].strip()
125
+ path
126
+ for entry_status, path in _porcelain_entries(status.stdout)
127
+ if entry_status == "??" and path.strip()
105
128
  )
106
129
  seen: set[str] = set()
107
130
  return [f for f in out if not (f in seen or seen.add(f))]
@@ -109,7 +132,7 @@ def changed_files(project_dir: Path) -> list[str]:
109
132
 
110
133
  def _fingerprint(project_dir: Path) -> str | None:
111
134
  head = _git(["rev-parse", "HEAD"], project_dir)
112
- status = _git(["status", "--porcelain"], project_dir)
135
+ status = _git(["status", "--porcelain", "-z"], project_dir)
113
136
  if head is None or head.returncode != 0 or status is None:
114
137
  return None
115
138
  digest = hashlib.sha1()
@@ -117,9 +140,9 @@ def _fingerprint(project_dir: Path) -> str | None:
117
140
  # Porcelain alone only says WHICH files are dirty — editing an
118
141
  # already-dirty file leaves it unchanged. Fold in mtime+size so
119
142
  # content edits re-arm the worker.
120
- for line in sorted(status.stdout.splitlines()):
121
- digest.update(line.encode("utf-8", "replace"))
122
- digest.update(_stat_token(project_dir / line[3:].strip()))
143
+ for entry_status, path in sorted(_porcelain_entries(status.stdout)):
144
+ digest.update(f"{entry_status} {path}".encode("utf-8", "replace"))
145
+ digest.update(_stat_token(project_dir / path))
123
146
  return digest.hexdigest()
124
147
 
125
148
 
@@ -151,9 +174,13 @@ def _remember_fingerprint(state_file: Path, fingerprint: str) -> None:
151
174
  prev_umask = os.umask(0o077)
152
175
  try:
153
176
  state_file.parent.mkdir(parents=True, exist_ok=True)
154
- state_file.write_text(
177
+ # Atomic tmp+replace: a crash mid-write must never leave a
178
+ # truncated state file behind (the reorganizer report pattern).
179
+ tmp_file = state_file.with_suffix(f".tmp-{os.getpid()}")
180
+ tmp_file.write_text(
155
181
  json.dumps({"fingerprint": fingerprint}), encoding="utf-8"
156
182
  )
183
+ os.replace(tmp_file, state_file)
157
184
  except OSError:
158
185
  pass
159
186
  finally:
@@ -34,7 +34,9 @@ class StopLintSummary:
34
34
  runs: int
35
35
  skipped_runs: int
36
36
  lint_pass_rate: float
37
- typecheck_pass_rate: float
37
+ # None when no run observed the check (typecheck is opt-in) —
38
+ # distinct from 0.0, which means "observed and failing".
39
+ typecheck_pass_rate: float | None
38
40
  would_block_rate: float
39
41
  corrupt_line_count: int = 0
40
42
 
@@ -119,7 +121,7 @@ def _build_summary(
119
121
  runs=len(rows),
120
122
  skipped_runs=len(rows) - len(observed),
121
123
  lint_pass_rate=_true_rate(observed, "lint_passed"),
122
- typecheck_pass_rate=_true_rate(observed, "typecheck_passed"),
124
+ typecheck_pass_rate=_true_rate_or_none(observed, "typecheck_passed"),
123
125
  would_block_rate=_true_rate(observed, "would_block"),
124
126
  corrupt_line_count=corrupt,
125
127
  )
@@ -130,3 +132,10 @@ def _true_rate(rows: list[dict[str, Any]], key: str) -> float:
130
132
  if not observed:
131
133
  return 0.0
132
134
  return sum(1 for r in observed if r[key] is True) / len(observed)
135
+
136
+
137
+ def _true_rate_or_none(rows: list[dict[str, Any]], key: str) -> float | None:
138
+ """Like ``_true_rate`` but honest about zero observations."""
139
+ if not any(isinstance(r.get(key), bool) for r in rows):
140
+ return None
141
+ return _true_rate(rows, key)
@@ -36,7 +36,6 @@ import subprocess
36
36
  import time
37
37
  from pathlib import Path
38
38
 
39
- from core.shared.temp_paths import arkaos_temp_dir
40
39
  from core.hooks._shared import (
41
40
  ensure_root_on_path,
42
41
  get_str,
@@ -45,6 +44,7 @@ from core.hooks._shared import (
45
44
  resolve_arkaos_root,
46
45
  safe_session_id,
47
46
  )
47
+ from core.shared.temp_paths import arkaos_temp_dir
48
48
 
49
49
  _CACHE_DIR = arkaos_temp_dir("arkaos-context-cache")
50
50
  _CACHE_TTL = 300 # Constitution cache: 5 minutes
@@ -89,13 +89,14 @@ _WF_VERB_PATTERN = (
89
89
  )
90
90
  _WF_VERB_RE = re.compile(rf"\b{_WF_VERB_PATTERN}\b", re.IGNORECASE)
91
91
 
92
- _STOPWORDS = frozenset(
93
- "the a an and or but if then of for to in on at by with from is are was "
94
- "were be been being do does did have has had this that these those it "
95
- "its as i you we they he she them my your our their so not no yes can "
96
- "will would could should may might must need want fix make use get set "
97
- "add remove".split()
98
- )
92
+ _STOPWORDS = frozenset([
93
+ "the", "a", "an", "and", "or", "but", "if", "then", "of", "for", "to", "in", "on",
94
+ "at", "by", "with", "from", "is", "are", "was", "were", "be", "been", "being", "do",
95
+ "does", "did", "have", "has", "had", "this", "that", "these", "those", "it", "its",
96
+ "as", "i", "you", "we", "they", "he", "she", "them", "my", "your", "our", "their",
97
+ "so", "not", "no", "yes", "can", "will", "would", "could", "should", "may", "might",
98
+ "must", "need", "want", "fix", "make", "use", "get", "set", "add", "remove"
99
+ ])
99
100
 
100
101
  _VAGUE_PHRASES = (
101
102
  "fix the bug", "that file", "the error",
@@ -228,7 +229,14 @@ def _run_bridge(root: str, user_input: str, session_id: str, cwd: str = "") -> s
228
229
  payload["cwd"] = cwd
229
230
  output, code = module.run_bridge(payload, Path(root))
230
231
  if code == 0:
231
- return str(output.get("context_string", ""))
232
+ parts = [str(output.get("context_string", ""))]
233
+ # Full-text blocks follow the compact tag line. A tag such as
234
+ # `[kb-context:5 +graph]` announces an injection; without these
235
+ # the announcement was all the model ever received.
236
+ blocks = output.get("content_blocks") or []
237
+ if isinstance(blocks, list):
238
+ parts.extend(str(b) for b in blocks if b)
239
+ return "\n".join(p for p in parts if p)
232
240
  except Exception:
233
241
  pass
234
242
  return ""
@@ -251,10 +259,6 @@ def _workflow_tag() -> str:
251
259
  workflow = str(state.get("workflow", "") or "")
252
260
  branch = str(state.get("branch", "") or "")
253
261
  violations = len(state.get("violations", []) or [])
254
- total = len(phases)
255
- completed = sum(
256
- 1 for p in phases.values() if p.get("status") == "completed"
257
- )
258
262
  current = next(
259
263
  (k for k, p in phases.items() if p.get("status") == "in_progress"),
260
264
  "none",
@@ -334,10 +338,8 @@ def _l0_constitution() -> str:
334
338
  return cache_file.read_text(encoding="utf-8")
335
339
  except OSError:
336
340
  pass
337
- try:
341
+ with contextlib.suppress(OSError):
338
342
  cache_file.write_text(_L0_FALLBACK, encoding="utf-8")
339
- except OSError:
340
- pass
341
343
  return _L0_FALLBACK
342
344
 
343
345
 
@@ -501,10 +503,8 @@ def _one_shot_nudge(subdir: str, session_id: str) -> str:
501
503
  nudge = f"[arka:suggest] {suggestion}"
502
504
  except (OSError, json.JSONDecodeError, ValueError):
503
505
  pass
504
- try:
506
+ with contextlib.suppress(OSError):
505
507
  nudge_file.unlink(missing_ok=True)
506
- except OSError:
507
- pass
508
508
  return nudge
509
509
 
510
510
 
@@ -548,10 +548,8 @@ def main(stdin_json: dict | None = None, raw: str = "") -> int:
548
548
 
549
549
  root = resolve_arkaos_root()
550
550
  ensure_root_on_path(root)
551
- try:
551
+ with contextlib.suppress(OSError):
552
552
  _CACHE_DIR.mkdir(parents=True, exist_ok=True)
553
- except OSError:
554
- pass
555
553
 
556
554
  # Claude Code sends the user's text under "prompt" (UserPromptSubmit
557
555
  # hook schema); "userInput"/"message" cover other runtimes. Missing
@@ -683,4 +681,4 @@ if __name__ == "__main__":
683
681
  except Exception:
684
682
  # Fail open with the minimal constitution context.
685
683
  print(json.dumps({"additionalContext": _L0_FALLBACK}))
686
- raise SystemExit(0)
684
+ raise SystemExit(0) from None
@@ -13,8 +13,8 @@ import time
13
13
  from dataclasses import dataclass, field
14
14
  from typing import Any
15
15
 
16
- from core.synapse.layers import Layer, LayerResult, PromptContext
17
16
  from core.synapse.cache import LayerCache
17
+ from core.synapse.layers import Layer, LayerResult, PromptContext
18
18
 
19
19
 
20
20
  @dataclass
@@ -27,6 +27,12 @@ class SynapseResult:
27
27
  total_tokens_est: int # Estimated total tokens injected
28
28
  cache_stats: dict # Cache hit/miss statistics
29
29
  layers_skipped: int # Layers that returned empty results
30
+ # Full-text blocks from layers whose content is richer than their tag
31
+ # (L2.5 KB context, graph context). Kept separate from context_string so
32
+ # the compact tag line stays compact; the hook appends these after it.
33
+ # Before this existed, LayerResult.content had NO consumer — every block a
34
+ # layer built was discarded while its tag still advertised the injection.
35
+ content_blocks: list[str] = field(default_factory=list)
30
36
 
31
37
 
32
38
  class SynapseEngine:
@@ -44,11 +50,11 @@ class SynapseEngine:
44
50
  def register_layer(self, layer: Layer) -> None:
45
51
  """Register a context layer. Layers execute in priority order."""
46
52
  self._layers.append(layer)
47
- self._layers.sort(key=lambda l: l.priority)
53
+ self._layers.sort(key=lambda x: x.priority)
48
54
 
49
55
  def remove_layer(self, layer_id: str) -> None:
50
56
  """Remove a layer by ID."""
51
- self._layers = [l for l in self._layers if l.id != layer_id]
57
+ self._layers = [x for x in self._layers if x.id != layer_id]
52
58
 
53
59
  def get_layer(self, layer_id: str) -> Layer | None:
54
60
  """Get a layer by ID."""
@@ -70,10 +76,13 @@ class SynapseEngine:
70
76
  results: list[LayerResult] = []
71
77
  skipped = 0
72
78
 
79
+ block_layers: set[str] = set()
73
80
  for layer in self._layers:
74
81
  result = self._compute_layer(layer, ctx)
75
82
  if result.tag or result.content:
76
83
  results.append(result)
84
+ if layer.emits_block:
85
+ block_layers.add(layer.id)
77
86
  else:
78
87
  skipped += 1
79
88
 
@@ -81,6 +90,15 @@ class SynapseEngine:
81
90
  tags = [r.tag for r in results if r.tag]
82
91
  context_string = " ".join(tags)
83
92
 
93
+ # Full-text blocks — OPT-IN via Layer.emits_block. Collecting on
94
+ # `content != tag` instead swept up every layer whose content is its
95
+ # tag's value ("dev", "active", "feat/plan-canvas"), injecting stray
96
+ # unlabeled lines into every prompt for zero added information.
97
+ content_blocks = [
98
+ r.content for r in results
99
+ if r.content and r.layer_id in block_layers
100
+ ]
101
+
84
102
  total_tokens = sum(r.tokens_est for r in results)
85
103
  total_ms = int((time.time() - start) * 1000)
86
104
 
@@ -105,6 +123,7 @@ class SynapseEngine:
105
123
  total_tokens_est=total_tokens,
106
124
  cache_stats=self._cache.stats,
107
125
  layers_skipped=skipped,
126
+ content_blocks=content_blocks,
108
127
  )
109
128
 
110
129
  def _compute_layer(self, layer: Layer, ctx: PromptContext) -> LayerResult:
@@ -125,15 +144,23 @@ class SynapseEngine:
125
144
  session_id = (ctx.extra or {}).get("session_id", "default")
126
145
  cache_key += f":{session_id}"
127
146
 
128
- # Check cache
147
+ # Check cache. The stored value is `tag` alone, or `tag\x00content`
148
+ # whenever content differs from tag: replaying the tag as the content
149
+ # would feed a marker to the model in place of what it advertises.
150
+ # This condition is deliberately WIDER than `emits_block` — the cache
151
+ # round-trips content faithfully for every layer (AgentLayer stores
152
+ # `[agent:x disc:y]\x00x` and is no block at all); only the block
153
+ # channel in inject() is opt-in.
129
154
  if layer.cache_ttl > 0:
130
155
  cached = self._cache.get(cache_key)
131
156
  if cached is not None:
157
+ tag, _, content = cached.partition("\x00")
158
+ content = content or tag
132
159
  return LayerResult(
133
160
  layer_id=layer.id,
134
- tag=cached,
135
- content=cached,
136
- tokens_est=len(cached.split()),
161
+ tag=tag,
162
+ content=content,
163
+ tokens_est=len(content.split()),
137
164
  compute_ms=0,
138
165
  cached=True,
139
166
  )
@@ -143,7 +170,10 @@ class SynapseEngine:
143
170
 
144
171
  # Cache if TTL > 0 and result is non-empty
145
172
  if layer.cache_ttl > 0 and result.tag:
146
- self._cache.set(cache_key, result.tag, layer.cache_ttl)
173
+ stored = result.tag
174
+ if result.content and result.content != result.tag:
175
+ stored = f"{result.tag}\x00{result.content}"
176
+ self._cache.set(cache_key, stored, layer.cache_ttl)
147
177
 
148
178
  return result
149
179
 
@@ -188,21 +218,21 @@ def create_default_engine(
188
218
  Returns:
189
219
  Configured SynapseEngine ready to use.
190
220
  """
221
+ from core.synapse.agent_experiences_layer import AgentExperiencesLayer
222
+ from core.synapse.graph_context_layer import GraphContextLayer
191
223
  from core.synapse.layers import (
192
- ConstitutionLayer,
193
- DepartmentLayer,
194
224
  AgentLayer,
195
- ProjectLayer,
196
225
  BranchLayer,
197
226
  CommandHintsLayer,
198
- QualityGateLayer,
199
- KnowledgeRetrievalLayer,
200
- KBContextLayer,
227
+ ConstitutionLayer,
228
+ DepartmentLayer,
201
229
  ForgeContextLayer,
230
+ KBContextLayer,
231
+ KnowledgeRetrievalLayer,
232
+ ProjectLayer,
233
+ QualityGateLayer,
202
234
  SessionContextLayer,
203
235
  )
204
- from core.synapse.agent_experiences_layer import AgentExperiencesLayer
205
- from core.synapse.graph_context_layer import GraphContextLayer
206
236
  from core.synapse.pattern_library_layer import PatternLibraryLayer
207
237
  from core.synapse.recipe_layer import RecipeLayer
208
238
  from core.synapse.routing_feedback_layer import RoutingFeedbackLayer
@@ -26,7 +26,7 @@ import json
26
26
  import os
27
27
  import time
28
28
  from pathlib import Path
29
- from typing import Any, Optional
29
+ from typing import Any
30
30
 
31
31
  from core.synapse.layers import Layer, LayerResult, PromptContext
32
32
  from core.synapse.pattern_library_layer import _extract_keywords
@@ -58,7 +58,7 @@ def _graph_flag_on() -> bool:
58
58
  return bool(synapse_cfg.get("graphContext", True))
59
59
 
60
60
 
61
- def _locate_graph(cwd: str) -> Optional[Path]:
61
+ def _locate_graph(cwd: str) -> Path | None:
62
62
  """Find ``graphify-out/graph.json`` in cwd or up to 3 parent dirs."""
63
63
  if not cwd:
64
64
  return None
@@ -149,6 +149,11 @@ class GraphContextLayer(Layer):
149
149
  def cache_ttl(self) -> int:
150
150
  return 30
151
151
 
152
+ @property
153
+ def emits_block(self) -> bool:
154
+ """Content is the self-naming [arka:graph-context:N] block."""
155
+ return True
156
+
152
157
  @property
153
158
  def priority(self) -> int:
154
159
  return 26 # right after L2.5 KBContext (25), before ProjectLayer (30)
@@ -20,6 +20,7 @@ Turn-scoped marker (record_obsidian_query / read_obsidian_query):
20
20
  as core.workflow.marker_cache).
21
21
  """
22
22
 
23
+ import contextlib
23
24
  import hashlib
24
25
  import json
25
26
  import os
@@ -27,12 +28,11 @@ import threading
27
28
  import time
28
29
  import uuid
29
30
  from pathlib import Path
30
- from typing import Any, Optional
31
+ from typing import Any
31
32
 
32
33
  from core.shared import safe_session_id as _safe_session_id_module
33
34
  from core.shared.temp_paths import arkaos_temp_dir
34
35
 
35
-
36
36
  # Re-export for backward compatibility with any external importers.
37
37
  SAFE_SESSION_ID_RE = _safe_session_id_module.SAFE_SESSION_ID_RE
38
38
  KB_QUERY_MARKER_DIR = arkaos_temp_dir("arkaos-kb-query")
@@ -147,8 +147,8 @@ class KBSessionCache:
147
147
  def __init__(
148
148
  self,
149
149
  session_id: str,
150
- project_path: Optional[str] = None,
151
- cache_dir: Optional[str] = None,
150
+ project_path: str | None = None,
151
+ cache_dir: str | None = None,
152
152
  max_entries: int = 150,
153
153
  ttl_seconds: int = 5400,
154
154
  ) -> None:
@@ -278,8 +278,8 @@ class KBSessionCache:
278
278
 
279
279
  def retrieve(
280
280
  self,
281
- query: Optional[str] = None,
282
- topics: Optional[set[str]] = None,
281
+ query: str | None = None,
282
+ topics: set[str] | None = None,
283
283
  threshold: float = 0.3,
284
284
  ) -> list[dict]:
285
285
  """Retrieve cached knowledge by query or topic overlap.
@@ -433,11 +433,44 @@ def _kb_query_dir() -> Path:
433
433
  return KB_QUERY_MARKER_DIR
434
434
 
435
435
 
436
- def _kb_query_path(session_id: str) -> Optional[Path]:
436
+ def _kb_query_path(session_id: str, kind: str = "obsidian") -> Path | None:
437
+ """Turn-scoped marker path for one KB source.
438
+
439
+ ``kind`` separates the sources so a graphify consult cannot satisfy a
440
+ check that asked about Obsidian, or vice versa. "obsidian" keeps the
441
+ historical unsuffixed filename so existing records stay readable.
442
+ """
437
443
  safe = _safe_session_id_module.safe_session_id(session_id)
438
444
  if safe is None:
439
445
  return None
440
- return _kb_query_dir() / f"{safe}.json"
446
+ suffix = "" if kind == "obsidian" else f".{kind}"
447
+ return _kb_query_dir() / f"{safe}{suffix}.json"
448
+
449
+
450
+ def record_graphify_query(session_id: str, query: str, hit_count: int = 0) -> None:
451
+ """Record that a Graphify graph query ran in this turn.
452
+
453
+ Counterpart to :func:`record_obsidian_query`. Without it the ``[graph:``
454
+ citation marker is pure narration — anyone can type ``[graph: MadeUpNode]``
455
+ and earn credit (QG review). A consumer that wants evidence rather than a
456
+ claim should require :func:`graphify_queried_this_turn` alongside it.
457
+ """
458
+ _record_query(session_id, query, hit_count, kind="graphify")
459
+
460
+
461
+ def read_graphify_query(session_id: str) -> dict | None:
462
+ """Return the turn-scoped Graphify-query record, or None if absent."""
463
+ return _read_query(session_id, kind="graphify")
464
+
465
+
466
+ def graphify_queried_this_turn(session_id: str) -> bool:
467
+ """True iff ``record_graphify_query`` was called since turn start."""
468
+ return read_graphify_query(session_id) is not None
469
+
470
+
471
+ def invalidate_graphify_query(session_id: str) -> None:
472
+ """Clear the per-turn Graphify consult marker. Idempotent."""
473
+ _invalidate_query(session_id, kind="graphify")
441
474
 
442
475
 
443
476
  def record_obsidian_query(session_id: str, query: str, hit_count: int = 0) -> None:
@@ -455,7 +488,12 @@ def record_obsidian_query(session_id: str, query: str, hit_count: int = 0) -> No
455
488
  query: The query string that was executed.
456
489
  hit_count: Number of notes returned (0 means search ran but empty).
457
490
  """
458
- path = _kb_query_path(session_id)
491
+ _record_query(session_id, query, hit_count, kind="obsidian")
492
+
493
+
494
+ def _record_query(session_id: str, query: str, hit_count: int, kind: str) -> None:
495
+ """Shared writer for every KB source marker. Atomic tmp+rename."""
496
+ path = _kb_query_path(session_id, kind)
459
497
  if path is None:
460
498
  return
461
499
  safe_query = (query or "")[:_MAX_QUERY_LEN]
@@ -464,7 +502,7 @@ def record_obsidian_query(session_id: str, query: str, hit_count: int = 0) -> No
464
502
  except (TypeError, ValueError):
465
503
  hits = 0
466
504
  now = time.time()
467
- existing = read_obsidian_query(session_id) or {}
505
+ existing = _read_query(session_id, kind) or {}
468
506
  queries_raw = existing.get("queries")
469
507
  queries = list(queries_raw) if isinstance(queries_raw, list) else []
470
508
  queries.append({"query": safe_query, "hit_count": hits, "ts": now})
@@ -472,6 +510,7 @@ def record_obsidian_query(session_id: str, query: str, hit_count: int = 0) -> No
472
510
  queries = queries[-_MAX_QUERIES_PER_TURN:]
473
511
  record = {
474
512
  "session_id": session_id,
513
+ "kind": kind,
475
514
  "queries": queries,
476
515
  "last_query_ts": now,
477
516
  "last_hit_count": hits,
@@ -483,15 +522,18 @@ def record_obsidian_query(session_id: str, query: str, hit_count: int = 0) -> No
483
522
  tmp.write_text(json.dumps(record), encoding="utf-8")
484
523
  os.replace(tmp, path)
485
524
  except OSError:
486
- try:
525
+ with contextlib.suppress(FileNotFoundError):
487
526
  tmp.unlink()
488
- except FileNotFoundError:
489
- pass
490
527
 
491
528
 
492
- def read_obsidian_query(session_id: str) -> Optional[dict]:
529
+ def read_obsidian_query(session_id: str) -> dict | None:
493
530
  """Return the turn-scoped Obsidian-query record, or None if absent."""
494
- path = _kb_query_path(session_id)
531
+ return _read_query(session_id, kind="obsidian")
532
+
533
+
534
+ def _read_query(session_id: str, kind: str) -> dict | None:
535
+ """Shared reader for every KB source marker."""
536
+ path = _kb_query_path(session_id, kind)
495
537
  if path is None or not path.exists():
496
538
  return None
497
539
  try:
@@ -510,7 +552,12 @@ def obsidian_queried_this_turn(session_id: str) -> bool:
510
552
 
511
553
  def invalidate_obsidian_query(session_id: str) -> None:
512
554
  """Clear the per-turn KB consult marker. Idempotent."""
513
- path = _kb_query_path(session_id)
555
+ _invalidate_query(session_id, kind="obsidian")
556
+
557
+
558
+ def _invalidate_query(session_id: str, kind: str) -> None:
559
+ """Shared invalidator for every KB source marker."""
560
+ path = _kb_query_path(session_id, kind)
514
561
  if path is None:
515
562
  return
516
563
  try: