appsec-agent 1.1.0 → 1.2.1

package/README.md

@@ -234,6 +234,27 @@ The diff context JSON file should follow this structure:
 
 **Note:** If `--diff-context` is provided without the `code_reviewer` role, a warning will be displayed as the option is only applicable to code reviews.
 
+#### PR chunking (large PRs)
+
+When a PR diff exceeds the model's context limit, **chunking** splits the diff into batches, reviews each batch, then merges the reports into a single output file.
+
+- **Config** (in `conf/appsec_agent.yaml`): PR diff chunking options live under **`pr_reviewer.options`** and are **on by default** when you use the `pr_reviewer` role with `-d/--diff-context`. The `code_reviewer` role does not have chunking enabled by default.
+  - `diff_review_max_tokens_per_batch`: e.g. `150000` (0 or omit = no chunking)
+  - `diff_review_max_batches`: e.g. `3` (cap on number of batches per run)
+  - `diff_review_max_files`: optional cap on files reviewed; rest are skipped
+  - `diff_review_exclude_paths`: optional list of path patterns to exclude (e.g. `["src/analytics/*"]`)
+- **CLI** (override config): `--diff-max-tokens <n>`, `--diff-max-batches <n>`, `--diff-max-files <n>`, `--diff-exclude <pattern>` (repeatable)
+
+When chunking is used, the merged report may include a **Skipped** section listing files that were excluded or that exceeded the batch limit. Total API cost is logged per batch and as a total, and (for JSON reports) included in `meta.total_cost_usd`.
+
+```bash
+# pr_reviewer has chunking on by default when using -d
+$ npx agent-run -r pr_reviewer -d pr-diff.json
+
+# Or enable chunking via CLI when using code_reviewer (overrides config)
+$ npx agent-run -r code_reviewer -d pr-diff.json --diff-max-tokens 150000 --diff-max-batches 3
+```
+
 ### Threat Modeler Example
 ```bash
 # Run threat modeler on current directory

package/conf/appsec_agent.yaml

@@ -24,7 +24,12 @@ default: &default
     options:
       system_prompt: "You are an Application Security (AppSec) expert assistant specializing in Pull Request security reviews. Analyze ONLY the changed code provided in the diff context. Focus on security implications of the new or modified code, cite specific line numbers from the provided diff, and write the security review report."
       output_format: "markdown"
-    verbose: True
+      verbose: True
+      # PR diff chunking (for -d/--diff-context): on by default for pr_reviewer
+      diff_review_max_tokens_per_batch: 150000
+      diff_review_max_batches: 3
+      diff_review_max_files: 80
+      # diff_review_exclude_paths: []
 
 
 development:

package/dist/bin/agent-run.js

@@ -58,7 +58,11 @@ program
     .option('-k, --anthropic-api-key <key>', 'Anthropic API key (overrides ANTHROPIC_API_KEY environment variable)')
     .option('-u, --anthropic-base-url <url>', 'Anthropic API base URL (overrides ANTHROPIC_BASE_URL environment variable)')
     .option('-c, --context <context>', 'Additional context for the code review (e.g., deployment environment, architecture, compliance requirements)')
-    .option('-d, --diff-context <file>', 'JSON file with diff context for PR-focused code review (optimizes token usage)')
+    .option('--diff-context <file>', 'JSON file with diff context for PR-focused code review (optimizes token usage)')
+    .option('--diff-max-tokens <n>', 'Max tokens per batch for PR chunking (0 = disabled). Overrides config.')
+    .option('--diff-max-batches <n>', 'Max batches per PR run (e.g. 3). Overrides config.')
+    .option('--diff-max-files <n>', 'Max files to include in PR review; rest skipped. Overrides config.')
+    .option('--diff-exclude <pattern>', 'Exclude path pattern (repeatable). Overrides config.', (v, acc) => { acc.push(v); return acc; }, [])
     .option('-m, --model <model>', 'Claude model to use: sonnet, opus, haiku - default to "sonnet"', 'sonnet')
     .option('-F, --failover', 'Enable failover to OpenAI when Anthropic fails (optional feature, off by default). Overrides FAILOVER_ENABLED env.')
     .option('-K, --openai-api-key <key>', 'OpenAI API key for failover (overrides OPENAI_API_KEY env). Only used when failover is enabled.')
@@ -118,7 +122,7 @@ if (!validModels.includes(options.model)) {
     console.error(`Error: Invalid model "${options.model}". Valid options: ${validModels.join(', ')}`);
     process.exit(1);
 }
-// Prepare args
+// Prepare args (chunking: CLI overrides config; main will merge with conf)
 const args = {
     role: options.role,
     environment: options.environment,
@@ -128,7 +132,11 @@ const args = {
     verbose: options.verbose,
     context: options.context,
     diff_context: options.diffContext,
-    model: options.model
+    model: options.model,
+    diff_max_tokens_per_batch: options.diffMaxTokens !== undefined ? parseInt(options.diffMaxTokens, 10) : undefined,
+    diff_max_batches: options.diffMaxBatches !== undefined ? parseInt(options.diffMaxBatches, 10) : undefined,
+    diff_max_files: options.diffMaxFiles !== undefined ? parseInt(options.diffMaxFiles, 10) : undefined,
+    diff_exclude: Array.isArray(options.diffExclude) && options.diffExclude.length > 0 ? options.diffExclude : undefined
 };
 // Log context if provided
 if (args.context) {

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+{"version":3,"file":"agent-run.js","sourceRoot":"","sources":["../../bin/agent-run.ts"],"names":[],"mappings":";;AACA;;;;GAIG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAEH,2CAA6B;AAC7B,yCAAoC;AAEpC,yCAAyC;AACzC,0FAA0F;AAC1F,MAAM,EAAE,QAAQ,EAAE,SAAS,EAAE,gBAAgB,EAAE,cAAc,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,cAAc,CAAC,CAAC,CAAC;AAChH,MAAM,EAAE,IAAI,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,aAAa,CAAC,CAAC,CAAC;AAE9D,MAAM,OAAO,GAAG,IAAI,mBAAO,EAAE,CAAC;AAE9B,OAAO;KACJ,IAAI,CAAC,WAAW,CAAC;KACjB,WAAW,CAAC,uCAAuC,CAAC;KACpD,MAAM,CAAC,mBAAmB,EAAE,gFAAgF,CAAC;KAC7G,MAAM,CAAC,yBAAyB,EAAE,wDAAwD,EAAE,aAAa,CAAC;KAC1G,MAAM,CAAC,mBAAmB,EAAE,0GAA0G,EAAE,oBAAoB,CAAC;KAC7J,MAAM,CAAC,qBAAqB,EAAE,wEAAwE,CAAC;KACvG,MAAM,CAAC,0BAA0B,EAAE,gFAAgF,CAAC;KACpH,MAAM,CAAC,8BAA8B,EAAE,uEAAuE,EAAE,UAAU,CAAC;KAC3H,MAAM,CAAC,+BAA+B,EAAE,sEAAsE,CAAC;KAC/G,MAAM,CAAC,gCAAgC,EAAE,4EAA4E,CAAC;KACtH,MAAM,CAAC,yBAAyB,EAAE,8GAA8G,CAAC;KACjJ,MAAM,CAAC,uBAAuB,EAAE,gFAAgF,CAAC;KACjH,MAAM,CAAC,uBAAuB,EAAE,wEAAwE,CAAC;KACzG,MAAM,CAAC,wBAAwB,EAAE,oDAAoD,CAAC;KACtF,MAAM,CAAC,sBAAsB,EAAE,oEAAoE,CAAC;KACpG,MAAM,CAAC,0BAA0B,EAAE,sDAAsD,EAAE,CAAC,CAAS,EAAE,GAAa,EAAE,EAAE,GAAG,GAAG,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,OAAO,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC;KAC1J,MAAM,CAAC,qBAAqB,EAAE,gEAAgE,EAAE,QAAQ,CAAC;KACzG,MAAM,CAAC,gBAAgB,EAAE,oHAAoH,CAAC;KAC9I,MAAM,CAAC,4BAA4B,EAAE,iGAAiG,CAAC;KACvI,MAAM,CAAC,6BAA6B,EAAE,uGAAuG,CAAC;KAC9I,MAAM,CAAC,kBAAkB,EAAE,0BAA0B,CAAC;KACtD,MAAM,CAAC,eAAe,EAAE,iBAAiB,CAAC;KAC1C,MAAM,CAAC,eAAe,EAAE,cAAc,CAAC,CAAC;AAE3C,OAAO,CAAC,KAAK,EAAE,CAAC;AAEhB,MAAM,OAAO,GAAG,OAAO,CAAC,IAAI,EAAE,CAAC;AAE/B,sBAAsB;AACtB,IAAI,OAAO,CAAC,OAAO,EAAE,CAAC;IACpB,gBAAgB,EAAE,CAAC;IACnB,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC;AAED,sCAAsC;AACtC,MAAM,QAAQ,GAAG,OAAO,CAAC,IAAI,IAAI,IAAI,CAAC,IAAI,CAAC,cAAc,EAAE,EAAE,MAAM,EAAE,mBAAmB,CAAC,CAAC;AAE1F,OAAO,CAAC,GAAG,CAAC,6CAA6C,EAAE,QAAQ,CAAC,CAAC;AACrE,MAAM,QAAQ,GAAG,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC,OAAO,CAAC,CAAC;AAErD,IAAI,CAAC,QAAQ,EAAE,CAAC;IACd,OAAO,CAAC,KAAK,CAAC,mCAAmC,CAAC,CAAC;IACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC;AAED,OAAO,CAAC,GAAG,CAAC,sDAAsD,CAAC,CAAC;AAEpE,yBAAyB;AACzB,IAAI,OAAO,CAAC,UAAU,EAAE,CAAC;IACvB,OAAO,CAAC,GAAG,CAAC,6CAA6C,CAAC,CAAC;IAC3D,SAAS,CAAC,QAAQ,EAAE,OAAO,CAAC,WAAW,CAAC,CAAC;IACzC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC;AAED,uEAAuE;AACvE,yFAAyF;AACzF,0EAA0E;AAC1E,IAAI,OAAO,CAAC,eAAe,EAAE,CAAC;IAC5B,OAAO,CAAC,IAAI,CAAC,mEAAmE,CAAC,CAAC;IAClF,OAAO,CAAC,IAAI,CAAC,8EAA8E,CAAC,CAAC;IAC7F,OAAO,CAAC,IAAI,CAAC,mFAAmF,CAAC,CAAC;IAClG,OAAO,CAAC,GAAG,CAAC,iBAAiB,GAAG,OAAO,CAAC,eAAe,CAAC;AAC1D,CAAC;AACD,IAAI,OAAO,CAAC,gBAAgB,EAAE,CAAC;IAC7B,OAAO,CAAC,GAAG,CAAC,kBAAkB,GAAG,OAAO,CAAC,gBAAgB,CAAC;AAC5D,CAAC;AAED,8DAA8D;AAC9D,IAAI,OAAO,CAAC,QAAQ,KAAK,SAAS,EAAE,CAAC;IACnC,OAAO,CAAC,GAAG,CAAC,gBAAgB,GAAG,OAAO,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,OAAO,CAAC;AACrE,CAAC;AACD,IAAI,OAAO,CAAC,YAAY,KAAK,SAAS,EAAE,CAAC;IACvC,OAAO,CAAC,IAAI,CAAC,0EAA0E,CAAC,CAAC;IACzF,OAAO,CAAC,IAAI,CAAC,gFAAgF,CAAC,CAAC;IAC/F,OAAO,CAAC,GAAG,CAAC,cAAc,GAAG,OAAO,CAAC,YAAY,CAAC;AACpD,CAAC;AACD,IAAI,OAAO,CAAC,aAAa,KAAK,SAAS,EAAE,CAAC;IACxC,OAAO,CAAC,GAAG,CAAC,eAAe,GAAG,OAAO,CAAC,aAAa,CAAC;AACtD,CAAC;AAED,wBAAwB;AACxB,MAAM,WAAW,GAAG,CAAC,QAAQ,EAAE,MAAM,EAAE,OAAO,CAAC,CAAC;AAChD,IAAI,CAAC,WAAW,CAAC,QAAQ,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC;IACzC,OAAO,CAAC,KAAK,CAAC,yBAAyB,OAAO,CAAC,KAAK,qBAAqB,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACnG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC;AAED,2EAA2E;AAC3E,MAAM,IAAI,GAAG;IACX,IAAI,EAAE,OAAO,CAAC,IAAI;IAClB,WAAW,EAAE,OAAO,CAAC,WAAW;IAChC,OAAO,EAAE,OAAO,CAAC,OAAO;IACxB,WAAW,EAAE,OAAO,CAAC,WAAW;IAChC,aAAa,EAAE,OAAO,CAAC,aAAa;IACpC,OAAO,EAAE,OAAO,CAAC,OAAO;IACxB,OAAO,EAAE,OAAO,CAAC,OAAO;IACxB,YAAY,EAAE,OAAO,CAAC,WAAW;IACjC,KAAK,EAAE,OAAO,CAAC,KAAK;IACpB,yBAAyB,EAAE,OAAO,CAAC,aAAa,KAAK,SAAS,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,aAAa,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;IAChH,gBAAgB,EAAE,OAAO,CAAC,cAAc,KAAK,SAAS,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,cAAc,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;IACzG,cAAc,EAAE,OAAO,CAAC,YAAY,KAAK,SAAS,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,YAAY,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;IACnG,YAAY,EAAE,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,WAAW,CAAC,IAAI,OAAO,CAAC,WAAW,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,WAAW,CAAC,CAAC,CAAC,SAAS;CACrH,CAAC;AAEF,0BAA0B;AAC1B,IAAI,IAAI,CAAC,OAAO,EAAE,CAAC;IACjB,OAAO,CAAC,GAAG,CAAC,gBAAgB,EAAE,IAAI,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC,GAAG,CAAC,IAAI,CAAC,OAAO,CAAC,MAAM,GAAG,EAAE,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;AACzG,CAAC;AAED,+DAA+D;AAC/D,IAAI,IAAI,CAAC,YAAY,EAAE,CAAC;IACtB,OAAO,CAAC,GAAG,CAAC,0BAA0B,EAAE,IAAI,CAAC,YAAY,CAAC,CAAC;IAC3D,IAAI,IAAI,CAAC,IAAI,KAAK,eAAe,IAAI,IAAI,CAAC,IAAI,KAAK,aAAa,EAAE,CAAC;QACjE,OAAO,CAAC,IAAI,CAAC,sFAAsF,CAAC,CAAC;QACrG,OAAO,CAAC,IAAI,CAAC,oBAAoB,IAAI,CAAC,IAAI,qCAAqC,CAAC,CAAC;QACjF,OAAO,CAAC,IAAI,CAAC,oFAAoF,CAAC,CAAC;IACrG,CAAC;AACH,CAAC;AAED,oBAAoB;AACpB,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,CAAC,KAAK,CAAC,CAAC,KAAY,EAAE,EAAE;IAC1C,OAAO,CAAC,KA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package/dist/conf/appsec_agent.yaml

@@ -24,7 +24,12 @@ default: &default
     options:
       system_prompt: "You are an Application Security (AppSec) expert assistant specializing in Pull Request security reviews. Analyze ONLY the changed code provided in the diff context. Focus on security implications of the new or modified code, cite specific line numbers from the provided diff, and write the security review report."
       output_format: "markdown"
-    verbose: True
+      verbose: True
+      # PR diff chunking (for -d/--diff-context): on by default for pr_reviewer
+      diff_review_max_tokens_per_batch: 150000
+      diff_review_max_batches: 3
+      diff_review_max_files: 80
+      # diff_review_exclude_paths: []
 
 
 development:

package/dist/src/agent_actions.d.ts

@@ -14,6 +14,10 @@ export interface AgentArgs {
     context?: string;
     diff_context?: string;
     model?: string;
+    diff_max_tokens_per_batch?: number;
+    diff_max_batches?: number;
+    diff_max_files?: number;
+    diff_exclude?: string[];
 }
 export declare class AgentActions {
     private confDict;
@@ -36,7 +40,10 @@ export declare class AgentActions {
     /**
      * PR diff-focused code reviewer with options
      * Optimized for reviewing only changed code from a pull request
+     * @param onResult - Optional callback to collect cost for chunked runs (e.g. aggregate total_cost_usd across batches)
      */
-    diffReviewerWithOptions(userPrompt: string, srcDir?: string | null): Promise<string>;
+    diffReviewerWithOptions(userPrompt: string, srcDir?: string | null, onResult?: (result: {
+        total_cost_usd?: number;
+    }) => void): Promise<string>;
 }
 //# sourceMappingURL=agent_actions.d.ts.map

package/dist/src/agent_actions.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"agent_actions.d.ts","sourceRoot":"","sources":["../../src/agent_actions.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAKH,OAAO,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AAGrC,MAAM,WAAW,SAAS;IACxB,IAAI,EAAE,MAAM,CAAC;IACb,WAAW,EAAE,MAAM,CAAC;IACpB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,aAAa,CAAC,EAAE,MAAM,CAAC;IACvB,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,KAAK,CAAC,EAAE,MAAM,CAAC;IAEf,yBAAyB,CAAC,EAAE,MAAM,CAAC;IACnC,gBAAgB,CAAC,EAAE,MAAM,CAAC;IAC1B,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,YAAY,CAAC,EAAE,MAAM,EAAE,CAAC;CACzB;AAOD,qBAAa,YAAY;IACvB,OAAO,CAAC,QAAQ,CAAa;IAC7B,OAAO,CAAC,WAAW,CAAS;IAC5B,OAAO,CAAC,IAAI,CAAY;IACxB,OAAO,CAAC,mBAAmB,CAA2B;gBAC1C,QAAQ,EAAE,UAAU,EAAE,WAAW,EAAE,MAAM,EAAE,IAAI,EAAE,SAAS;IAMtE;;OAEG;IACG,4BAA4B,CAAC,UAAU,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,OAAO,CAAC,MAAM,CAAC;IAiJ/F;;OAEG;IACG,uBAAuB,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC;IAiElE;;OAEG;IACG,6BAA6B,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC;IA8DxE;;;;OAIG;IACG,uBAAuB,CAC3B,UAAU,EAAE,MAAM,EAClB,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,EACtB,QAAQ,CAAC,EAAE,CAAC,MAAM,EAAE;QAAE,cAAc,CAAC,EAAE,MAAM,CAAA;KAAE,KAAK,IAAI,GACvD,OAAO,CAAC,MAAM,CAAC;CAiEnB"}

package/dist/src/agent_actions.js

@@ -311,8 +311,9 @@ class AgentActions {
     /**
      * PR diff-focused code reviewer with options
      * Optimized for reviewing only changed code from a pull request
+     * @param onResult - Optional callback to collect cost for chunked runs (e.g. aggregate total_cost_usd across batches)
      */
-    async diffReviewerWithOptions(userPrompt, srcDir) {
+    async diffReviewerWithOptions(userPrompt, srcDir, onResult) {
         const agentOptions = new agent_options_1.AgentOptions(this.confDict, this.environment, this.args.model);
         const options = agentOptions.getDiffReviewerOptions(this.args.role, srcDir);
         // Declare cursor outside try block so it's accessible in catch
@@ -357,6 +358,7 @@ class AgentActions {
                         if (resultMsg.total_cost_usd && resultMsg.total_cost_usd > 0) {
                             console.log(`\nCost: $${resultMsg.total_cost_usd.toFixed(4)}`);
                         }
+                        onResult?.({ total_cost_usd: resultMsg.total_cost_usd });
                     }
                 }
             }

package/dist/src/agent_actions.js.map

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package/dist/src/diff_chunking.d.ts

@@ -0,0 +1,35 @@
+/**
+ * PR diff chunking: token estimation, file filtering, and batching.
+ * Kept in a separate module for easier tracking and rework (e.g. if 1M-context models reduce need for chunking).
+ *
+ * Author: Sam Li
+ */
+import { DiffContext, DiffContextFile } from './diff_context';
+/**
+ * Estimate token count for a string (approximate).
+ */
+export declare function estimateTokens(text: string): number;
+export interface ChunkingOptions {
+    /** Max tokens per batch (prompt body). 0 = no chunking. */
+    maxTokensPerBatch: number;
+    /** Max number of batches per run. */
+    maxBatches: number;
+    /** Optional cap on number of files to include; rest are skipped. */
+    maxFiles?: number;
+    /** Optional path patterns to exclude (prefix or glob-like *). e.g. "src/analytics/" or "src/analytics/*". */
+    excludePaths?: string[];
+}
+export interface ChunkingResult {
+    /** Batches to review (each under token limit). */
+    batches: DiffContext[];
+    /** Files excluded by excludePaths or maxFiles. */
+    skippedFiles: DiffContextFile[];
+    /** True if more batches would have been needed but maxBatches was reached. */
+    skippedDueToBatches: boolean;
+}
+/**
+ * Filter and batch diff context for chunked PR review.
+ * Applies exclude paths, maxFiles, then groups files into batches under maxTokensPerBatch, capped by maxBatches.
+ */
+export declare function splitIntoBatches(context: DiffContext, options: ChunkingOptions): ChunkingResult;
+//# sourceMappingURL=diff_chunking.d.ts.map

package/dist/src/diff_chunking.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"diff_chunking.d.ts","sourceRoot":"","sources":["../../src/diff_chunking.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,WAAW,EAAE,eAAe,EAA8B,MAAM,gBAAgB,CAAC;AAK1F;;GAEG;AACH,wBAAgB,cAAc,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAGnD;AAED,MAAM,WAAW,eAAe;IAC9B,2DAA2D;IAC3D,iBAAiB,EAAE,MAAM,CAAC;IAC1B,qCAAqC;IACrC,UAAU,EAAE,MAAM,CAAC;IACnB,oEAAoE;IACpE,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,6GAA6G;IAC7G,YAAY,CAAC,EAAE,MAAM,EAAE,CAAC;CACzB;AAED,MAAM,WAAW,cAAc;IAC7B,kDAAkD;IAClD,OAAO,EAAE,WAAW,EAAE,CAAC;IACvB,kDAAkD;IAClD,YAAY,EAAE,eAAe,EAAE,CAAC;IAChC,8EAA8E;IAC9E,mBAAmB,EAAE,OAAO,CAAC;CAC9B;AAqDD;;;GAGG;AACH,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,WAAW,EAAE,OAAO,EAAE,eAAe,GAAG,cAAc,CAiF/F"}

package/dist/src/diff_chunking.js

@@ -0,0 +1,151 @@
+"use strict";
+/**
+ * PR diff chunking: token estimation, file filtering, and batching.
+ * Kept in a separate module for easier tracking and rework (e.g. if 1M-context models reduce need for chunking).
+ *
+ * Author: Sam Li
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.estimateTokens = estimateTokens;
+exports.splitIntoBatches = splitIntoBatches;
+const diff_context_1 = require("./diff_context");
+/** Approximate chars per token for English/code. Used for prompt size estimation. */
+const CHARS_PER_TOKEN = 4;
+/**
+ * Estimate token count for a string (approximate).
+ */
+function estimateTokens(text) {
+    if (!text || text.length === 0)
+        return 0;
+    return Math.ceil(text.length / CHARS_PER_TOKEN);
+}
+/**
+ * Check if a file path matches any exclude pattern.
+ * Patterns: prefix match (e.g. "src/analytics/") or suffix "*" for prefix (e.g. "src/analytics/*").
+ */
+function pathMatchesExclude(filePath, excludePaths) {
+    const normalized = filePath.replace(/\\/g, '/');
+    for (const pattern of excludePaths) {
+        const p = pattern.replace(/\\/g, '/').trim();
+        if (p.endsWith('*')) {
+            const prefix = p.slice(0, -1);
+            if (normalized.startsWith(prefix) || normalized === prefix.slice(0, -1))
+                return true;
+        }
+        else {
+            if (normalized.startsWith(p) || normalized === p)
+                return true;
+        }
+    }
+    return false;
+}
+/**
+ * Compute total lines added/removed for a list of files from their hunks.
+ */
+function sumLinesForFiles(files) {
+    let added = 0;
+    let removed = 0;
+    for (const file of files) {
+        for (const hunk of file.hunks) {
+            const code = hunk.changedCode || '';
+            const lines = code.split('\n');
+            for (const line of lines) {
+                if (line.startsWith('+') && !line.startsWith('+++'))
+                    added += 1;
+                else if (line.startsWith('-') && !line.startsWith('---'))
+                    removed += 1;
+            }
+        }
+    }
+    return { added, removed };
+}
+/**
+ * Build a DiffContext with the given files and same metadata as the parent context.
+ */
+function buildBatchContext(parent, files) {
+    const { added, removed } = sumLinesForFiles(files);
+    return {
+        ...parent,
+        files,
+        totalFilesChanged: files.length,
+        totalLinesAdded: added,
+        totalLinesRemoved: removed
+    };
+}
+/**
+ * Filter and batch diff context for chunked PR review.
+ * Applies exclude paths, maxFiles, then groups files into batches under maxTokensPerBatch, capped by maxBatches.
+ */
+function splitIntoBatches(context, options) {
+    const { maxTokensPerBatch, maxBatches, maxFiles, excludePaths } = options;
+    let files = context.files;
+    // Apply exclude paths
+    const skippedByExclude = [];
+    if (excludePaths && excludePaths.length > 0) {
+        const included = [];
+        for (const f of files) {
+            if (pathMatchesExclude(f.filePath, excludePaths)) {
+                skippedByExclude.push(f);
+            }
+            else {
+                included.push(f);
+            }
+        }
+        files = included;
+    }
+    // Apply maxFiles
+    const skippedByMaxFiles = [];
+    if (maxFiles !== undefined && maxFiles > 0 && files.length > maxFiles) {
+        skippedByMaxFiles.push(...files.slice(maxFiles));
+        files = files.slice(0, maxFiles);
+    }
+    const allSkippedFiles = [...skippedByExclude, ...skippedByMaxFiles];
+    // No chunking: single batch if under limit
+    if (maxTokensPerBatch <= 0) {
+        const batchCtx = buildBatchContext(context, files);
+        const promptText = (0, diff_context_1.formatDiffContextForPrompt)(batchCtx);
+        const tokens = estimateTokens(promptText);
+        return {
+            batches: files.length > 0 ? [batchCtx] : [],
+            skippedFiles: allSkippedFiles,
+            skippedDueToBatches: false
+        };
+    }
+    // Build batches by adding files until the next would exceed maxTokensPerBatch
+    const batches = [];
+    let currentFiles = [];
+    const promptOverhead = estimateTokens('You are reviewing a Pull Request for security vulnerabilities.\n\n## Review Instructions\n\nAnalyze ONLY the changed code...');
+    for (const file of files) {
+        const nextFiles = [...currentFiles, file];
+        const nextContext = buildBatchContext(context, nextFiles);
+        const nextPrompt = (0, diff_context_1.formatDiffContextForPrompt)(nextContext);
+        const nextTokens = estimateTokens(nextPrompt) + promptOverhead;
+        // If this single file alone exceeds the batch limit, put it in its own batch (graceful degradation)
+        if (currentFiles.length === 0 && nextTokens > maxTokensPerBatch) {
+            batches.push(buildBatchContext(context, [file]));
+            if (batches.length >= maxBatches)
+                break;
+            continue;
+        }
+        if (nextTokens > maxTokensPerBatch && currentFiles.length > 0) {
+            batches.push(buildBatchContext(context, [...currentFiles]));
+            if (batches.length >= maxBatches)
+                break;
+            currentFiles = [file];
+        }
+        else {
+            currentFiles = nextFiles;
+        }
+    }
+    if (currentFiles.length > 0 && batches.length < maxBatches) {
+        batches.push(buildBatchContext(context, currentFiles));
+    }
+    const totalFilesInBatches = batches.reduce((sum, b) => sum + b.files.length, 0);
+    const skippedDueToBatches = files.length > 0 && totalFilesInBatches < files.length;
+    return {
+        batches,
+        skippedFiles: allSkippedFiles,
+        skippedDueToBatches
+    };
+}
+//# sourceMappingURL=diff_chunking.js.map

package/dist/src/diff_chunking.js.map

@@ -0,0 +1 @@
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package/dist/src/diff_report_merge.d.ts

@@ -0,0 +1,28 @@
+/**
+ * Merge PR review batch reports into a single output file.
+ * Kept in a separate module for easier tracking and rework.
+ *
+ * Author: Sam Li
+ */
+export interface MergeOptions {
+    /** Paths to batch report files in order. */
+    batchPaths: string[];
+    /** Final output file path. */
+    outputPath: string;
+    /** Output format: json, markdown, etc. */
+    format: string;
+    /** Total API cost (sum of batches) for metadata. */
+    totalCostUsd?: number;
+    /** Per-batch costs for metadata. */
+    batchCosts?: number[];
+    /** File paths that were skipped (for "Skipped" section). */
+    skippedFilePaths?: string[];
+    /** Human-readable message for skipped section (e.g. batch limit or size). */
+    skippedMessage?: string;
+}
+/**
+ * Merge batch report files into a single output file.
+ * Format-specific: JSON (merge findings arrays + meta), Markdown (concat with batch headers + Skipped + cost).
+ */
+export declare function mergeBatchReports(options: MergeOptions): void;
+//# sourceMappingURL=diff_report_merge.d.ts.map

package/dist/src/diff_report_merge.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/diff_report_merge.js

@@ -0,0 +1,164 @@
+"use strict";
+/**
+ * Merge PR review batch reports into a single output file.
+ * Kept in a separate module for easier tracking and rework.
+ *
+ * Author: Sam Li
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.mergeBatchReports = mergeBatchReports;
+const fs = __importStar(require("fs-extra"));
+const path = __importStar(require("path"));
+/** Common keys that might hold an array of findings in a JSON report. */
+const FINDINGS_KEYS = ['findings', 'issues', 'results', 'items'];
+function tryParseJson(filePath) {
+    const content = fs.readFileSync(filePath, 'utf-8');
+    try {
+        return JSON.parse(content);
+    }
+    catch {
+        return null;
+    }
+}
+function mergeJsonReports(batchPaths, outputPath, meta) {
+    const merged = {};
+    let mergedArray = [];
+    let usedKey = null;
+    let firstBatchUsed = false;
+    for (let i = 0; i < batchPaths.length; i++) {
+        const p = batchPaths[i];
+        if (!fs.existsSync(p))
+            continue;
+        const data = tryParseJson(p);
+        if (data === null)
+            continue;
+        if (Array.isArray(data)) {
+            mergedArray = mergedArray.concat(data);
+            continue;
+        }
+        if (data && typeof data === 'object') {
+            const obj = data;
+            if (!firstBatchUsed) {
+                Object.assign(merged, obj);
+                firstBatchUsed = true;
+            }
+            for (const key of FINDINGS_KEYS) {
+                if (Array.isArray(obj[key])) {
+                    usedKey = usedKey || key;
+                    mergedArray = mergedArray.concat(obj[key]);
+                    break;
+                }
+            }
+            if (!usedKey) {
+                mergedArray.push(data);
+            }
+        }
+    }
+    if (usedKey) {
+        merged[usedKey] = mergedArray;
+    }
+    else if (mergedArray.length > 0) {
+        merged.findings = mergedArray;
+    }
+    if (Object.keys(meta).length > 0) {
+        merged.meta = meta;
+    }
+    fs.ensureDirSync(path.dirname(outputPath) || '.');
+    fs.writeFileSync(outputPath, JSON.stringify(merged, null, 2), 'utf-8');
+}
+function mergeMarkdownReports(batchPaths, outputPath, options) {
+    const sections = [];
+    for (let i = 0; i < batchPaths.length; i++) {
+        const p = batchPaths[i];
+        if (!fs.existsSync(p))
+            continue;
+        const content = fs.readFileSync(p, 'utf-8').trim();
+        if (!content)
+            continue;
+        sections.push(`## Batch ${i + 1}\n\n${content}`);
+    }
+    if (options.skippedFilePaths && options.skippedFilePaths.length > 0 && options.skippedMessage) {
+        sections.push('## Skipped\n\n' + options.skippedMessage);
+        sections.push('\nSkipped files:\n' + options.skippedFilePaths.map(f => `- ${f}`).join('\n'));
+    }
+    else if (options.skippedMessage) {
+        sections.push('## Skipped\n\n' + options.skippedMessage);
+    }
+    if (options.totalCostUsd !== undefined && options.totalCostUsd > 0) {
+        sections.push(`\n---\nTotal API cost for this run: $${options.totalCostUsd.toFixed(4)}`);
+    }
+    const merged = sections.join('\n\n---\n\n');
+    fs.ensureDirSync(path.dirname(outputPath) || '.');
+    fs.writeFileSync(outputPath, merged, 'utf-8');
+}
+/**
+ * Merge batch report files into a single output file.
+ * Format-specific: JSON (merge findings arrays + meta), Markdown (concat with batch headers + Skipped + cost).
+ */
+function mergeBatchReports(options) {
+    const { batchPaths, outputPath, format, totalCostUsd, batchCosts, skippedFilePaths, skippedMessage } = options;
+    const meta = {};
+    if (totalCostUsd !== undefined)
+        meta.total_cost_usd = totalCostUsd;
+    if (batchCosts && batchCosts.length > 0)
+        meta.batch_costs = batchCosts;
+    const normFormat = (format || 'markdown').toLowerCase();
+    if (normFormat === 'json') {
+        mergeJsonReports(batchPaths, outputPath, meta);
+        return;
+    }
+    if (normFormat === 'markdown') {
+        mergeMarkdownReports(batchPaths, outputPath, {
+            skippedFilePaths,
+            skippedMessage,
+            totalCostUsd
+        });
+        return;
+    }
+    // Other formats: concatenate raw content with batch headers
+    const sections = [];
+    for (let i = 0; i < batchPaths.length; i++) {
+        const p = batchPaths[i];
+        if (!fs.existsSync(p))
+            continue;
+        sections.push(`## Batch ${i + 1}\n\n` + fs.readFileSync(p, 'utf-8'));
+    }
+    if (sections.length > 0) {
+        fs.ensureDirSync(path.dirname(outputPath) || '.');
+        fs.writeFileSync(outputPath, sections.join('\n\n'), 'utf-8');
+    }
+}
+//# sourceMappingURL=diff_report_merge.js.map

package/dist/src/diff_report_merge.js.map

@@ -0,0 +1 @@
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package/dist/src/main.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"main.d.ts","sourceRoot":"","sources":["../../src/main.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,OAAO,EAAgB,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAyI1D,wBAAsB,IAAI,CAAC,QAAQ,EAAE,GAAG,EAAE,IAAI,EAAE,SAAS,GAAG,OAAO,CAAC,IAAI,CAAC,CA6HxE"}
+{"version":3,"file":"main.d.ts","sourceRoot":"","sources":["../../src/main.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAIH,OAAO,EAAgB,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAmK1D,wBAAsB,IAAI,CAAC,QAAQ,EAAE,GAAG,EAAE,IAAI,EAAE,SAAS,GAAG,OAAO,CAAC,IAAI,CAAC,CAsLxE"}

package/dist/src/main.js

@@ -40,9 +40,12 @@ var __importStar = (this && this.__importStar) || (function () {
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.main = main;
 const fs = __importStar(require("fs-extra"));
+const path = __importStar(require("path"));
 const agent_actions_1 = require("./agent_actions");
 const utils_1 = require("./utils");
 const diff_context_1 = require("./diff_context");
+const diff_chunking_1 = require("./diff_chunking");
+const diff_report_merge_1 = require("./diff_report_merge");
 /**
  * Validate and copy source directory, exiting on validation failure
  */
@@ -123,6 +126,28 @@ function loadDiffContext(diffContextPath, cwd) {
     }
     return data;
 }
+/** Defaults for PR chunking when not set (0 = no chunking). */
+const DEFAULT_MAX_TOKENS_PER_BATCH = 0;
+const DEFAULT_MAX_BATCHES = 3;
+/**
+ * Get chunking options from config and args (args override config).
+ */
+function getChunkingOptions(confDict, environment, args) {
+    const role = args.role === 'pr_reviewer' || args.role === 'code_reviewer' ? args.role : 'code_reviewer';
+    const roleOpts = confDict?.[environment]?.[role]?.options ?? confDict?.default?.[role]?.options;
+    const fromConfig = {
+        maxTokensPerBatch: roleOpts?.diff_review_max_tokens_per_batch ?? DEFAULT_MAX_TOKENS_PER_BATCH,
+        maxBatches: roleOpts?.diff_review_max_batches ?? DEFAULT_MAX_BATCHES,
+        maxFiles: roleOpts?.diff_review_max_files,
+        excludePaths: Array.isArray(roleOpts?.diff_review_exclude_paths) ? roleOpts.diff_review_exclude_paths : undefined
+    };
+    return {
+        maxTokensPerBatch: args.diff_max_tokens_per_batch !== undefined ? args.diff_max_tokens_per_batch : fromConfig.maxTokensPerBatch,
+        maxBatches: args.diff_max_batches !== undefined ? args.diff_max_batches : fromConfig.maxBatches,
+        maxFiles: args.diff_max_files !== undefined ? args.diff_max_files : fromConfig.maxFiles,
+        excludePaths: args.diff_exclude && args.diff_exclude.length > 0 ? args.diff_exclude : fromConfig.excludePaths
+    };
+}
 /**
  * Build user prompt for PR diff-focused code review
  */
@@ -197,16 +222,69 @@ async function main(confDict, args) {
         // Check if running in diff-context mode (PR-focused review)
         if (args.diff_context) {
             console.log('Running PR Diff Code Review Agent (focused context mode)');
-            // Load diff context
             const diffContext = loadDiffContext(args.diff_context, currentWorkingDir);
             console.log(`Reviewing PR #${diffContext.prNumber}: ${diffContext.totalFilesChanged} files (+${diffContext.totalLinesAdded}/-${diffContext.totalLinesRemoved})`);
-            // Copy source directory if provided (for full file access when needed)
             const tmpSrcDir = args.src_dir ? validateAndCopySrcDir(args.src_dir, currentWorkingDir) : null;
-            // Build focused prompt
-            const userPrompt = buildDiffReviewPrompt(diffContext, outputFile, args.output_format || 'json', args.context);
-            // Use diff-focused reviewer options
-            await agentActions.diffReviewerWithOptions(userPrompt, tmpSrcDir);
-            cleanupTmpDir(tmpSrcDir);
+            const chunkingOpts = getChunkingOptions(confDict, args.environment, args);
+            const { batches, skippedFiles, skippedDueToBatches } = (0, diff_chunking_1.splitIntoBatches)(diffContext, chunkingOpts);
+            const singleBatchNoSkipped = batches.length === 1 && skippedFiles.length === 0 && !skippedDueToBatches;
+            if (singleBatchNoSkipped) {
+                const userPrompt = buildDiffReviewPrompt(batches[0], outputFile, args.output_format || 'json', args.context);
+                await agentActions.diffReviewerWithOptions(userPrompt, tmpSrcDir);
+                cleanupTmpDir(tmpSrcDir);
+            }
+            else if (batches.length > 0) {
+                const extension = (0, utils_1.getExtensionForFormat)(args.output_format);
+                const tempDir = path.join(currentWorkingDir, `.pr_review_batches_${Date.now()}`);
+                fs.ensureDirSync(tempDir);
+                const batchPaths = [];
+                const batchCosts = [];
+                try {
+                    for (let i = 0; i < batches.length; i++) {
+                        const batchOutputPath = path.join(tempDir, `code_review_batch_${i + 1}.${extension}`);
+                        const userPrompt = buildDiffReviewPrompt(batches[i], batchOutputPath, args.output_format || 'json', args.context);
+                        await agentActions.diffReviewerWithOptions(userPrompt, tmpSrcDir, (result) => {
+                            if (result.total_cost_usd !== undefined && result.total_cost_usd > 0) {
+                                batchCosts.push(result.total_cost_usd);
+                            }
+                        });
+                        if (fs.existsSync(batchOutputPath)) {
+                            batchPaths.push(batchOutputPath);
+                        }
+                    }
+                    const totalCostUsd = batchCosts.length > 0 ? batchCosts.reduce((a, b) => a + b, 0) : undefined;
+                    const skippedPaths = skippedFiles.map(f => f.filePath);
+                    let skippedMessage;
+                    if (skippedDueToBatches) {
+                        skippedMessage = `PR exceeded batch limit (max ${chunkingOpts.maxBatches} batches). Only the first ${batchPaths.length} batch(es) were reviewed. Consider splitting the PR or using a full repository review.`;
+                    }
+                    else if (skippedPaths.length > 0) {
+                        skippedMessage = `${skippedPaths.length} file(s) excluded by config (max_files or exclude_paths).`;
+                    }
+                    (0, diff_report_merge_1.mergeBatchReports)({
+                        batchPaths,
+                        outputPath: outputFile,
+                        format: args.output_format || 'json',
+                        totalCostUsd,
+                        batchCosts: batchCosts.length > 0 ? batchCosts : undefined,
+                        skippedFilePaths: skippedPaths.length > 0 ? skippedPaths : undefined,
+                        skippedMessage
+                    });
+                    if (batchCosts.length > 0) {
+                        batchCosts.forEach((c, i) => console.log(`Batch ${i + 1}: $${c.toFixed(4)}`));
+                        const total = batchCosts.reduce((a, b) => a + b, 0);
+                        console.log(`Total API cost: $${total.toFixed(4)}`);
+                    }
+                }
+                finally {
+                    cleanupTmpDir(tempDir, args.verbose ?? false);
+                    cleanupTmpDir(tmpSrcDir);
+                }
+            }
+            else {
+                console.warn('No files to review after filtering.');
+                cleanupTmpDir(tmpSrcDir);
+            }
         }
         else {
             // Standard full-repository code review

package/dist/src/main.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "appsec-agent",
-  "version": "1.1.0",
+  "version": "1.2.1",
   "description": "TypeScript package for AppSec AI Agent management",
   "author": "Sam Li",
   "date": "Jan 21 2026",
@@ -32,11 +32,12 @@
     "typescript"
   ],
   "dependencies": {
-    "@anthropic-ai/claude-agent-sdk": "^0.1.76",
+    "@anthropic-ai/claude-agent-sdk": "^0.2.39",
     "openai": "^4.73.0",
     "yaml": "^2.4.0",
     "commander": "^11.1.0",
-    "fs-extra": "^11.2.0"
+    "fs-extra": "^11.2.0",
+    "zod": "^4.0.0"
   },
   "devDependencies": {
     "@types/jest": "^29.5.12",
@@ -48,7 +49,7 @@
     "ts-node": "^10.9.2"
   },
   "peerDependencies": {
-    "@anthropic-ai/claude-code": "2.0.65"
+    "@anthropic-ai/claude-code": "2.1.39"
   },
   "engines": {
     "node": ">=18.0.0"