allotaxonometer-ui 0.1.2 → 0.1.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/dist/index.js CHANGED
@@ -1,67 +1,8 @@
1
1
  import 'svelte/internal/disclose-version';
2
2
  import * as $ from 'svelte/internal/client';
3
- import { scaleLinear } from 'd3-scale';
4
- import { range, extent } from 'd3-array';
5
3
  import * as d3 from 'd3';
6
- import { extent as extent$1, InternSet, range as range$1, rollup, scaleLinear as scaleLinear$1, scaleBand, rgb, interpolateInferno, scaleOrdinal, max, scaleLog } from 'd3';
7
-
8
- var root_1$8 = $.from_svg(`<circle stroke="white" stroke-width="1"></circle>`);
9
- var root$9 = $.from_svg(`<svg width="400" height="200" xmlns="http://www.w3.org/2000/svg"><rect width="400" height="200" fill="#f8f9fa" stroke="#dee2e6"></rect><text x="200" y="25" text-anchor="middle" font-size="16" font-weight="bold"> </text><g class="chart"></g><line x1="20" y1="180" x2="380" y2="180" stroke="#666" stroke-width="1"></line><line x1="20" y1="20" x2="20" y2="180" stroke="#666" stroke-width="1"></line><text x="200" y="198" text-anchor="middle" font-size="12" fill="#666">X Axis</text><text x="12" y="100" text-anchor="middle" font-size="12" fill="#666" transform="rotate(-90, 12, 100)">Y Axis</text></svg>`);
10
-
11
- function Test($$anchor, $$props) {
12
- $.push($$props, true);
13
-
14
- let message = $.prop($$props, 'message', 3, "Hello World"),
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- data = $.prop($$props, 'data', 19, () => []);
16
-
17
- // If no data provided, generate some test data
18
- let testData = data().length > 0
19
- ? data()
20
- : range(10).map((i) => ({
21
- x: i,
22
- y: Math.sin(i / 2) * 20 + 50,
23
- value: Math.random()
24
- }));
25
- // Pure D3 calculations - no DOM manipulation
26
- let xScale = scaleLinear().domain(extent(testData, (d) => d.x)).range([20, 380]);
27
- let yScale = scaleLinear().domain(extent(testData, (d) => d.y)).range([180, 20]);
28
-
29
- // Calculate positions
30
- let points = testData.map((d) => ({
31
- cx: xScale(d.x),
32
- cy: yScale(d.y),
33
- r: 4 + d.value * 6,
34
- fill: `hsl(${d.value * 360}, 70%, 50%)`
35
- }));
36
-
37
- var svg = root$9();
38
- var text = $.sibling($.child(svg));
39
- var text_1 = $.child(text, true);
40
-
41
- $.reset(text);
42
-
43
- var g = $.sibling(text);
44
-
45
- $.each(g, 21, () => points, $.index, ($$anchor, point) => {
46
- var circle = root_1$8();
47
-
48
- $.template_effect(() => {
49
- $.set_attribute(circle, 'cx', $.get(point).cx);
50
- $.set_attribute(circle, 'cy', $.get(point).cy);
51
- $.set_attribute(circle, 'r', $.get(point).r);
52
- $.set_attribute(circle, 'fill', $.get(point).fill);
53
- });
54
-
55
- $.append($$anchor, circle);
56
- });
57
-
58
- $.reset(g);
59
- $.next(4);
60
- $.reset(svg);
61
- $.template_effect(() => $.set_text(text_1, message()));
62
- $.append($$anchor, svg);
63
- $.pop();
64
- }
4
+ import { map, extent, InternSet, range, rollup, scaleLinear, scaleBand, rgb, interpolateInferno, scaleOrdinal, max, scaleLog } from 'd3';
5
+ import { descending, sum, group, extent as extent$1 } from 'd3-array';
65
6
 
66
7
  var root_1$7 = $.from_svg(`<g class="xtick"><line x1="0" x2="0" y1="0" y2="6" stroke="hsla(212, 10%, 53%, 1)"></line></g><g class="tick-text"><text font-size="10" dx="13" dy="13"> </text></g>`, 1);
67
8
  var root$8 = $.from_svg(`<g class="axis x"><!><g class="xlab svelte-1y8xk6i"><text dy="45">Rank r</text><text dy="63">for</text><text dy="80"> </text><text dy="60" fill="hsla(212, 10%, 53%, 1)" opacity="0.7">more →</text><text dy="75" fill="hsla(212, 10%, 53%, 1)" opacity="0.7">frequent</text><text dy="60" fill="hsla(212, 10%, 53%, 1)" opacity="0.7">← less</text><text dy="75" fill="hsla(212, 10%, 53%, 1)" opacity="0.7">frequent</text></g></g>`);
@@ -269,14 +210,14 @@ function Contours($$anchor, $$props) {
269
210
  }
270
211
  }
271
212
 
272
- function make_grid(Ninset, tmpr1, tmpr2, alpha, rtd) {
213
+ function make_grid(Ninset, tmpr1, tmpr2, alpha, divnorm) {
273
214
  const deltamatrix = Array.from({ length: Ninset }, () => Array(Ninset).fill(0));
274
215
 
275
216
  for (let i = 0; i < Ninset; i++) {
276
217
  for (let j = 0; j < Ninset; j++) {
277
218
  const divElem = alpha_norm_type2(1 / tmpr1[i], 1 / tmpr2[j], alpha);
278
219
 
279
- deltamatrix[i][j] = divElem / rtd.normalization;
220
+ deltamatrix[i][j] = divElem / divnorm;
280
221
  }
281
222
 
282
223
  deltamatrix[i][i] = -1;
@@ -319,14 +260,14 @@ function Contours($$anchor, $$props) {
319
260
  return out;
320
261
  }
321
262
 
322
- function get_contours(alpha, maxlog10, rtd) {
263
+ function get_contours(alpha, maxlog10, divnorm) {
323
264
  const Ninset = 10 ** 3;
324
265
  const tmpr1 = d3.range(0, 1000).map((d) => Math.pow(10, d / 999 * 5));
325
266
  const tmpr2 = d3.range(0, 1000).map((d) => Math.pow(10, d / 999 * 5));
326
267
  const Ncontours = 10;
327
268
  const scale = d3.scaleLinear().domain([0, Ncontours + 1]).range([1, tmpr1.length]);
328
269
  const contour_indices = d3.range(Ncontours + 2).map((i) => Math.round(scale(i)));
329
- const grid = make_grid(Ninset, tmpr1, tmpr2, alpha, rtd);
270
+ const grid = make_grid(Ninset, tmpr1, tmpr2, alpha, divnorm);
330
271
  const indices = contour_indices.slice(1, -1);
331
272
  const lastRow = grid[grid.length - 1];
332
273
  const heights = indices.map((index) => lastRow[index]);
@@ -339,7 +280,7 @@ function Contours($$anchor, $$props) {
339
280
  }
340
281
 
341
282
  // Only calculate contours in browser
342
- let mycontours = $.derived(() => get_contours($$props.alpha, $$props.maxlog10, $$props.rtd));
283
+ let mycontours = $.derived(() => get_contours($$props.alpha, $$props.maxlog10, $$props.divnorm));
343
284
  const x = $.derived(() => d3.scaleLinear([0, $$props.maxlog10], [0, $$props.DiamondInnerHeight]));
344
285
  const y = $.derived(() => d3.scaleLinear([$$props.maxlog10, 0], [$$props.DiamondInnerHeight, 0]));
345
286
  const pathData = d3.line().x((d, i) => $.get(x)(d[0])).y((d, i) => $.get(y)(d[1]));
@@ -357,32 +298,39 @@ function Contours($$anchor, $$props) {
357
298
  $.pop();
358
299
  }
359
300
 
360
- var root_1$3 = $.from_svg(`<rect stroke="black" stroke-width="0.2"></rect>`);
301
+ var root_1$3 = $.from_svg(`<rect stroke="black"></rect>`);
361
302
  var root_2$3 = $.from_svg(`<g class="diamond-lab"><text dy="20" font-size="10"> </text></g>`);
362
303
  var root$4 = $.from_svg(`<g class="diamond-chart"><polygon fill="#89CFF0" fill-opacity="0.2" stroke="black" stroke-width="0.5"></polygon><polygon fill="grey" fill-opacity="0.2" stroke="black" stroke-width="0.5"></polygon><!><!><!><!><!><!></g>`);
363
304
 
364
305
  function Diamond($$anchor, $$props) {
365
306
  $.push($$props, true);
366
307
 
308
+ let DiamondHeight = $.prop($$props, 'DiamondHeight', 3, 600),
309
+ marginInner = $.prop($$props, 'marginInner', 3, 160),
310
+ marginDiamond = $.prop($$props, 'marginDiamond', 3, 40);
311
+
312
+ // Extract data from dat object
313
+ let diamond_dat = $.derived(() => $$props.dat.counts);
314
+ $.derived(() => $$props.dat.deltas);
315
+ // Calculate derived dimensions (matching D3 version)
316
+ let innerHeight = $.derived(() => DiamondHeight() - marginInner());
317
+ let diamondHeight = $.derived(() => $.get(innerHeight) - marginDiamond());
318
+
367
319
  function get_relevant_types(diamond_dat) {
368
- const ncells = 60;
369
- const bin_size = 1.5;
370
- const cummulative_bin = d3.range(0, ncells, bin_size);
320
+ // Use the logic from your D3 version instead
321
+ const ncells = d3.max(diamond_dat, (d) => d.x1);
322
+ const cumbin = d3.range(0, ncells, 1.5);
371
323
  const relevant_types = [];
372
324
 
373
325
  for (let sys of ["right", "left"]) {
374
- for (let i = 1; i < cummulative_bin.length; i++) {
375
- const filtered_dat = diamond_dat.filter((d) => d.value > 0 && d.which_sys == sys).filter((d) => d.coord_on_diag >= cummulative_bin[i - 1] && d.coord_on_diag < cummulative_bin[i]);
326
+ for (let i = 1; i < cumbin.length; i++) {
327
+ const filtered_dat = diamond_dat.filter((d) => d.value > 0 && d.which_sys == sys).filter((d) => d.coord_on_diag >= cumbin[i - 1] && d.coord_on_diag < cumbin[i]);
376
328
 
377
329
  if (filtered_dat.length > 0) {
378
330
  const cos_dists = filtered_dat.map((d) => d.cos_dist);
379
-
380
- const max_dist = cos_dists.reduce((a, b) => {
381
- return Math.max(a, b);
382
- });
383
-
331
+ const max_dist = cos_dists.reduce((a, b) => Math.max(a, b));
384
332
  const max_dist_idx = cos_dists.indexOf(max_dist);
385
- // Use a simple random selection instead of d3.shuffle during SSR
333
+ // SSR-safe random selection
386
334
  const types = filtered_dat[max_dist_idx]['types'].split(",");
387
335
  const name = types[Math.floor(Math.random() * types.length)];
388
336
 
@@ -395,44 +343,40 @@ function Diamond($$anchor, $$props) {
395
343
  }
396
344
 
397
345
  function rin(arr1, arr2) {
398
- return Array.from(arr1, (x) => {
399
- return arr2.indexOf(x) == -1 ? false : true;
400
- });
346
+ return Array.from(arr1, (x) => arr2.indexOf(x) !== -1);
401
347
  }
402
348
 
403
- // Wrangling data
404
- let relevant_types = $.derived(() => get_relevant_types($$props.diamond_dat));
405
- // Extracting constants - all these should be SSR-safe
406
- let max_rank_raw = $.derived(() => d3.range(d3.max($$props.diamond_count, (d) => d.x1)));
407
- let max_rank = $.derived(() => d3.max($$props.diamond_dat, (d) => d.rank_L[1]));
408
- let rounded_max_rank = $.derived(() => 10 ** Math.ceil(Math.max(Math.log10($.get(max_rank)))));
409
- let ncells = $.derived(() => d3.max($.get(max_rank_raw)));
349
+ // Wrangling data - Fixed variable references
350
+ let relevant_types = $.derived(() => get_relevant_types($.get(diamond_dat)));
351
+ let ncells = $.derived(() => d3.max($.get(diamond_dat), (d) => d.x1));
352
+ let max_rank = $.derived(() => d3.max($.get(diamond_dat), (d) => d.rank_L[1]));
353
+ let rounded_max_rank = $.derived(() => 10 ** Math.ceil(Math.log10($.get(max_rank))));
410
354
  let xyDomain = $.derived(() => [1, $.get(rounded_max_rank)]);
411
- // All the Scales! - These should be SSR-safe
412
- let linScale = $.derived(() => d3.scaleLinear().domain([0, $.get(ncells) - 1]).range([0, $$props.DiamondInnerHeight]));
413
- let wxy = $.derived(() => d3.scaleBand().domain($.get(max_rank_raw)).range([0, $$props.DiamondInnerHeight]));
414
- let logScale = $.derived(() => d3.scaleLog().domain($.get(xyDomain)).range([0, $$props.DiamondInnerHeight]).nice());
415
- let xy = $.derived(() => d3.scaleBand().domain($.get(max_rank_raw)).range([0, $$props.trueDiamondHeight]));
355
+ // Scales (matching D3 version dimensions)
356
+ let xy = $.derived(() => d3.scaleBand().domain($.get(diamond_dat).map((d) => d.y1)).range([0, $.get(diamondHeight)]));
357
+ let logScale = $.derived(() => d3.scaleLog().domain($.get(xyDomain)).range([0, $.get(innerHeight)]).nice());
358
+ let linScale = $.derived(() => d3.scaleLinear().domain([0, $.get(ncells) - 1]).range([0, $.get(innerHeight)]));
359
+ let wxy = $.derived(() => d3.scaleBand().domain(d3.range($.get(ncells))).range([0, $.get(innerHeight)]));
416
360
  let color_scale = d3.scaleSequentialLog().domain([$.get(rounded_max_rank), 1]).interpolator(d3.interpolateInferno);
417
361
 
418
- // Background colors
419
- let blue_triangle = [
362
+ // Background triangles (using innerHeight like D3 version)
363
+ let blue_triangle = $.derived(() => [
420
364
  [
421
- $$props.DiamondInnerHeight,
422
- $$props.DiamondInnerHeight
365
+ $.get(innerHeight),
366
+ $.get(innerHeight)
423
367
  ],
424
368
  [0, 0],
425
- [0, $$props.DiamondInnerHeight]
426
- ].join(" ");
369
+ [0, $.get(innerHeight)]
370
+ ].join(" "));
427
371
 
428
- let grey_triangle = [
372
+ let grey_triangle = $.derived(() => [
429
373
  [
430
- $$props.DiamondInnerHeight,
431
- $$props.DiamondInnerHeight
374
+ $.get(innerHeight),
375
+ $.get(innerHeight)
432
376
  ],
433
377
  [0, 0],
434
- [$$props.DiamondInnerHeight, 0]
435
- ].join(" ");
378
+ [$.get(innerHeight), 0]
379
+ ].join(" "));
436
380
 
437
381
  function filter_labs(d, relevant_types) {
438
382
  return rin(relevant_types, d.types.split(",")).some((x) => x === true);
@@ -445,7 +389,7 @@ function Diamond($$anchor, $$props) {
445
389
 
446
390
  AxisX(node, {
447
391
  get height() {
448
- return $$props.DiamondInnerHeight;
392
+ return $.get(innerHeight);
449
393
  },
450
394
  get scale() {
451
395
  return $.get(logScale);
@@ -459,7 +403,7 @@ function Diamond($$anchor, $$props) {
459
403
 
460
404
  AxisY(node_1, {
461
405
  get height() {
462
- return $$props.DiamondInnerHeight;
406
+ return $.get(innerHeight);
463
407
  },
464
408
  get scale() {
465
409
  return $.get(logScale);
@@ -473,7 +417,7 @@ function Diamond($$anchor, $$props) {
473
417
 
474
418
  Grid(node_2, {
475
419
  get height() {
476
- return $$props.DiamondInnerHeight;
420
+ return $.get(innerHeight);
477
421
  },
478
422
  get wxy() {
479
423
  return $.get(wxy);
@@ -488,7 +432,7 @@ function Diamond($$anchor, $$props) {
488
432
 
489
433
  var node_3 = $.sibling(node_2);
490
434
 
491
- $.each(node_3, 17, () => $$props.diamond_dat, $.index, ($$anchor, d) => {
435
+ $.each(node_3, 17, () => $.get(diamond_dat), $.index, ($$anchor, d) => {
492
436
  var rect = root_1$3();
493
437
 
494
438
  $.template_effect(
@@ -498,7 +442,9 @@ function Diamond($$anchor, $$props) {
498
442
  $.set_attribute(rect, 'width', $2);
499
443
  $.set_attribute(rect, 'height', $3);
500
444
  $.set_attribute(rect, 'fill', $4);
501
- $.set_attribute(rect, 'opacity', $.get(d).value === null ? 0 : 1.);
445
+ $.set_attribute(rect, 'opacity', $.get(d).value === 0 ? 0 : 1);
446
+ $.set_attribute(rect, 'stroke-width', $.get(d).value === 0 ? 0 : 0.1);
447
+ $.set_attribute(rect, 'stroke-opacity', $.get(d).value === 0 ? 0 : 0.9);
502
448
  },
503
449
  [
504
450
  () => $.get(xy)($.get(d).x1),
@@ -514,7 +460,7 @@ function Diamond($$anchor, $$props) {
514
460
 
515
461
  var node_4 = $.sibling(node_3);
516
462
 
517
- $.each(node_4, 17, () => $$props.diamond_dat.filter((d) => filter_labs(d, $.get(relevant_types))), $.index, ($$anchor, d) => {
463
+ $.each(node_4, 17, () => $.get(diamond_dat).filter((d) => filter_labs(d, $.get(relevant_types))), $.index, ($$anchor, d) => {
518
464
  var g_1 = root_2$3();
519
465
  var text = $.child(g_1);
520
466
  var text_1 = $.child(text, true);
@@ -558,264 +504,325 @@ function Diamond($$anchor, $$props) {
558
504
  get maxlog10() {
559
505
  return $$props.maxlog10;
560
506
  },
561
- get rtd() {
562
- return $$props.rtd;
507
+ get divnorm() {
508
+ return $$props.divnorm;
563
509
  },
564
510
  get DiamondInnerHeight() {
565
- return $$props.DiamondInnerHeight;
511
+ return $.get(innerHeight);
566
512
  }
567
513
  });
568
514
 
569
515
  $.reset(g);
570
516
 
571
517
  $.template_effect(() => {
572
- $.set_attribute(g, 'transform', `translate(360, 0) scale (-1,1) rotate(45) translate(${$$props.margin.inner / 2}, ${$$props.margin.inner / 2})`);
573
- $.set_attribute(polygon, 'points', blue_triangle);
574
- $.set_attribute(polygon_1, 'points', grey_triangle);
518
+ $.set_attribute(g, 'transform', `translate(360, 0) scale (-1,1) rotate(45) translate(${$.get(innerHeight) / 4}, ${$.get(innerHeight) / 4})`);
519
+ $.set_attribute(polygon, 'points', $.get(blue_triangle));
520
+ $.set_attribute(polygon_1, 'points', $.get(grey_triangle));
575
521
  });
576
522
 
577
523
  $.append($$anchor, g);
578
524
  $.pop();
579
525
  }
580
526
 
581
- var root_1$2 = $.from_svg(`<g class="tick"><line y1="0" stroke="hsla(212, 10%, 53%, 1)" stroke-opacity="0.2"> </line><text y="-12" font-size="0.8em"> </text></g>`);
582
- var root_2$2 = $.from_svg(`<rect></rect><text dy="14" font-size="0.7em"> </text>`, 1);
583
- var root$3 = $.from_svg(`<g class="barChart-container svelte-37sv8o"><g class="axis x"></g><!></g>`);
527
+ var root_1$2 = $.from_svg(`<g class="tick"><line y1="0" stroke="currentColor" stroke-opacity="0.1"></line><text y="-12" font-size="0.8em" text-anchor="middle"> </text></g>`);
528
+ var root_2$2 = $.from_svg(`<rect></rect>`);
529
+ var root_3$2 = $.from_svg(`<text dy="0.35em" font-size="0.7em"> </text>`);
530
+ var root$3 = $.from_svg(`<g class="wordshift-container svelte-48jn79"><g class="axis x"><!><text y="-22" fill="currentColor" text-anchor="center" font-size="0.9em"> </text></g><!><g class="y-axis"></g></g>`);
584
531
 
585
532
  function Wordshift($$anchor, $$props) {
586
533
  $.push($$props, true);
587
534
 
588
- let margin = { top: 80, left: 140, right: 50, bottom: 10 };
589
- let width = 640;
590
- let yPadding = 0.2;
591
- let Y = $.derived(() => d3.map($$props.barData, (d) => d.type));
592
- let max_shift = $.derived(() => d3.max($$props.barData, (d) => Math.abs(d.metric)) * 1.5);
593
- let xDomain = $.derived(() => [-$.get(max_shift), $.get(max_shift)]);
535
+ let x = $.prop($$props, 'x', 3, (d) => d.metric),
536
+ y = $.prop($$props, 'y', 3, (d) => d.type),
537
+ marginTop = $.prop($$props, 'marginTop', 3, 30),
538
+ marginRight = $.prop($$props, 'marginRight', 3, 40),
539
+ marginBottom = $.prop($$props, 'marginBottom', 3, 10),
540
+ marginLeft = $.prop($$props, 'marginLeft', 3, 40),
541
+ width = $.prop($$props, 'width', 3, 300);
542
+ $.prop($$props, 'height', 3, 680);
543
+ let xFormat = $.prop($$props, 'xFormat', 3, '%'),
544
+ xLabel = $.prop($$props, 'xLabel', 3, '← System 1 · Divergence contribution · System 2 →'),
545
+ yPadding = $.prop($$props, 'yPadding', 3, 0.2),
546
+ colors = $.prop($$props, 'colors', 19, () => ['lightgrey', 'lightblue']);
547
+
548
+ // Compute values (matching D3 version)
549
+ let X = $.derived(() => d3.map($$props.barData, x()));
550
+ let Y = $.derived(() => d3.map($$props.barData, y()));
551
+ // Compute domains
552
+ let computedXDomain = $.derived(() => $$props.xDomain || d3.extent($.get(X)));
594
553
  let yDomain = $.derived(() => new d3.InternSet($.get(Y)));
595
554
 
555
+ // Compute dimensions
596
556
  let xRange = $.derived(() => [
597
- $$props.DashboardWidth - width + margin.left,
598
- $$props.DashboardWidth - margin.right
557
+ marginLeft(),
558
+ width() - marginRight()
599
559
  ]);
600
560
 
561
+ let computedHeight = $.derived(() => Math.ceil(($.get(yDomain).size + yPadding()) * 25) + marginTop() + marginBottom());
562
+
601
563
  let yRange = $.derived(() => [
602
- margin.top,
603
- $$props.DashboardHeight - margin.bottom
564
+ marginTop(),
565
+ $.get(computedHeight) - marginBottom()
604
566
  ]);
605
567
 
606
- let xScale = $.derived(() => d3.scaleLinear().domain($.get(xDomain)).range($.get(xRange)));
607
- let yScale = $.derived(() => d3.scaleBand($.get(yDomain), $.get(yRange)).padding(yPadding));
608
- let xTicks = $.derived(() => $.get(xScale).ticks(width / 80));
609
- const colors = ["lightgrey", "lightblue"];
568
+ // Filter indices and create lookup
569
+ let I = $.derived(() => d3.range($.get(X).length).filter((i) => $.get(yDomain).has($.get(Y)[i])));
570
+ let YX = $.derived(() => d3.rollup($.get(I), ([i]) => $.get(X)[i], (i) => $.get(Y)[i]));
571
+ // Scales
572
+ let xScale = $.derived(() => d3.scaleLinear($.get(computedXDomain), $.get(xRange)));
573
+ let yScale = $.derived(() => d3.scaleBand().domain($.get(yDomain)).range($.get(yRange)).padding(yPadding()));
574
+ let format = $.derived(() => $.get(xScale).tickFormat(100, xFormat()));
575
+ let xTicks = $.derived(() => $.get(xScale).ticks(width() / 80));
576
+ // Position the chart (matching your current positioning)
577
+ let chartX = $.derived(() => $$props.DashboardWidth - width() + marginLeft());
578
+ let chartY = $.derived(marginTop);
610
579
  var g = root$3();
611
580
  var g_1 = $.child(g);
581
+ var node = $.child(g_1);
612
582
 
613
- $.each(g_1, 21, () => $.get(xTicks), $.index, ($$anchor, tick) => {
583
+ $.each(node, 17, () => $.get(xTicks), $.index, ($$anchor, tick) => {
614
584
  var g_2 = root_1$2();
615
585
  var line = $.child(g_2);
616
- var text = $.child(line, true);
617
-
618
- $.reset(line);
619
-
620
- var text_1 = $.sibling(line);
621
- var text_2 = $.child(text_1);
586
+ var text = $.sibling(line);
587
+ var text_1 = $.child(text, true);
622
588
 
623
- $.reset(text_1);
589
+ $.reset(text);
624
590
  $.reset(g_2);
625
591
 
626
592
  $.template_effect(
627
- ($0, $1, $2) => {
593
+ ($0, $1, $2, $3) => {
628
594
  $.set_attribute(line, 'x1', $0);
629
595
  $.set_attribute(line, 'x2', $1);
630
- $.set_attribute(line, 'y2', $$props.DashboardHeight - margin.top - margin.bottom);
631
- $.set_text(text, $.get(tick));
632
- $.set_attribute(text_1, 'x', $2);
633
- $.set_text(text_2, `${$.get(tick) * 100}%`);
596
+ $.set_attribute(line, 'y2', $.get(computedHeight) - marginTop() - marginBottom());
597
+ $.set_attribute(text, 'x', $2);
598
+ $.set_text(text_1, $3);
634
599
  },
635
600
  [
636
601
  () => $.get(xScale)($.get(tick)),
637
602
  () => $.get(xScale)($.get(tick)),
638
- () => $.get(xScale)($.get(tick))
603
+ () => $.get(xScale)($.get(tick)),
604
+ () => $.get(format)($.get(tick))
639
605
  ]
640
606
  );
641
607
 
642
608
  $.append($$anchor, g_2);
643
609
  });
644
610
 
645
- $.reset(g_1);
611
+ var text_2 = $.sibling(node);
612
+ var text_3 = $.child(text_2, true);
646
613
 
647
- var node = $.sibling(g_1);
614
+ $.reset(text_2);
615
+ $.reset(g_1);
648
616
 
649
- $.each(node, 17, () => $$props.barData, $.index, ($$anchor, d) => {
650
- var fragment = root_2$2();
651
- var rect = $.first_child(fragment);
652
- var text_3 = $.sibling(rect);
653
- var text_4 = $.child(text_3, true);
617
+ var node_1 = $.sibling(g_1);
654
618
 
655
- $.reset(text_3);
619
+ $.each(node_1, 17, () => $.get(I), $.index, ($$anchor, i) => {
620
+ var rect = root_2$2();
656
621
 
657
622
  $.template_effect(
658
- ($0, $1, $2, $3, $4, $5) => {
623
+ ($0, $1, $2, $3) => {
659
624
  $.set_attribute(rect, 'x', $0);
660
625
  $.set_attribute(rect, 'y', $1);
661
- $.set_attribute(rect, 'fill', colors[$.get(d).metric > 0 ? colors.length - 1 : 0]);
626
+ $.set_attribute(rect, 'fill', colors()[$.get(X)[$.get(i)] > 0 ? colors().length - 1 : 0]);
662
627
  $.set_attribute(rect, 'width', $2);
663
628
  $.set_attribute(rect, 'height', $3);
664
- $.set_attribute(text_3, 'x', $4);
665
- $.set_attribute(text_3, 'y', $5);
666
- $.set_text(text_4, $.get(d).type);
667
629
  },
668
630
  [
669
- () => Math.min($.get(xScale)(0), $.get(xScale)($.get(d).metric)),
670
- () => $.get(yScale)($.get(d).type),
671
- () => Math.abs($.get(xScale)($.get(d).metric) - $.get(xScale)(0)),
672
- () => $.get(yScale).bandwidth(),
673
- () => Math.min($.get(xScale)(0), $.get(xScale)($.get(d).metric)),
674
- () => $.get(yScale)($.get(d).type)
631
+ () => Math.min($.get(xScale)(0), $.get(xScale)($.get(X)[$.get(i)])),
632
+ () => $.get(yScale)($.get(Y)[$.get(i)]),
633
+ () => Math.abs($.get(xScale)($.get(X)[$.get(i)]) - $.get(xScale)(0)),
634
+ () => $.get(yScale).bandwidth()
675
635
  ]
676
636
  );
677
637
 
678
- $.append($$anchor, fragment);
638
+ $.append($$anchor, rect);
639
+ });
640
+
641
+ var g_3 = $.sibling(node_1);
642
+
643
+ $.each(g_3, 21, () => $.get(yScale).domain(), $.index, ($$anchor, label) => {
644
+ var text_4 = root_3$2();
645
+ var text_5 = $.child(text_4, true);
646
+
647
+ $.reset(text_4);
648
+
649
+ $.template_effect(
650
+ ($0, $1, $2) => {
651
+ $.set_attribute(text_4, 'x', $0);
652
+ $.set_attribute(text_4, 'y', $1);
653
+ $.set_attribute(text_4, 'text-anchor', $2);
654
+ $.set_text(text_5, $.get(label));
655
+ },
656
+ [
657
+ () => $.get(YX).get($.get(label)) > 0 ? 6 : -6,
658
+ () => $.get(yScale)($.get(label)) + $.get(yScale).bandwidth() / 2,
659
+ () => $.get(YX).get($.get(label)) > 0 ? "start" : "end"
660
+ ]
661
+ );
662
+
663
+ $.append($$anchor, text_4);
679
664
  });
680
665
 
666
+ $.reset(g_3);
681
667
  $.reset(g);
682
- $.template_effect(() => $.set_attribute(g_1, 'transform', `translate(0, ${margin.top})`));
668
+
669
+ $.template_effect(
670
+ ($0, $1) => {
671
+ $.set_attribute(g, 'transform', `translate(${$.get(chartX) ?? ''}, ${$.get(chartY) ?? ''})`);
672
+ $.set_attribute(g_1, 'transform', `translate(0, ${marginTop() ?? ''})`);
673
+ $.set_attribute(text_2, 'x', $0);
674
+ $.set_text(text_3, xLabel());
675
+ $.set_attribute(g_3, 'transform', `translate(${$1 ?? ''}, 0)`);
676
+ },
677
+ [
678
+ () => $.get(xScale)(0),
679
+ () => $.get(xScale)(0)
680
+ ]
681
+ );
682
+
683
683
  $.append($$anchor, g);
684
684
  $.pop();
685
685
  }
686
686
 
687
- var root_1$1 = $.from_svg(`<rect></rect><text opacity="0.5" dy="0.35em" font-size="10"> </text>`, 1);
688
- var root_2$1 = $.from_svg(`<g class="diverging-ticks"><text dy="-.9em" dx="-3em" font-size="10"> </text></g>`);
689
- var root$2 = $.from_svg(`<g class="balance-chart"><!><!></g>`);
687
+ var root_1$1 = $.from_svg(`<line y1="0" stroke="currentColor" stroke-opacity="0.1"></line>`);
688
+ var root_2$1 = $.from_svg(`<rect></rect><text opacity="0.5" dy="0.35em" font-size="10" font-family="sans-serif"> </text>`, 1);
689
+ var root_3$1 = $.from_svg(`<text x="0" dy="0.35em" font-size="10" font-family="sans-serif" text-anchor="middle"> </text>`);
690
+ var root$2 = $.from_svg(`<g class="balance-chart"><g class="grid"></g><!><g class="y-axis"></g></g>`);
690
691
 
691
692
  function DivergingBarChart($$anchor, $$props) {
692
693
  $.push($$props, true);
693
694
 
694
- const setdiff = (x, y) => {
695
- let a = new Set(x);
696
- let b = new Set(y);
697
-
698
- return new Set([...a].filter((x) => !b.has(x)));
699
- };
700
-
701
- const union = (x, y) => {
702
- let a = new Set(x);
703
- let b = new Set(y);
695
+ let x = $.prop($$props, 'x', 3, (d) => d.frequency),
696
+ y = $.prop($$props, 'y', 3, (d) => d.y_coord),
697
+ marginTop = $.prop($$props, 'marginTop', 3, 0),
698
+ marginRight = $.prop($$props, 'marginRight', 3, 40),
699
+ marginBottom = $.prop($$props, 'marginBottom', 3, 10),
700
+ marginLeft = $.prop($$props, 'marginLeft', 3, 40),
701
+ width = $.prop($$props, 'width', 3, 200),
702
+ yPadding = $.prop($$props, 'yPadding', 3, 0.5),
703
+ colors = $.prop($$props, 'colors', 19, () => ["lightgrey", "lightblue"]);
704
+
705
+ // Compute values (matching D3 version exactly)
706
+ let X = $.derived(() => map($$props.data, x()));
707
+ let Y = $.derived(() => map($$props.data, y()));
708
+ // Compute domains
709
+ let xDomain = $.derived(() => extent($.get(X)));
710
+ let yDomain = $.derived(() => new InternSet($.get(Y)));
704
711
 
705
- return new Set([...a, ...b]);
706
- };
712
+ // Compute dimensions
713
+ let xRange = $.derived(() => [
714
+ marginLeft(),
715
+ width() - marginRight()
716
+ ]);
707
717
 
708
- let types_1 = $.derived(() => $$props.test_elem_1.map((d) => d.types));
709
- let types_2 = $.derived(() => $$props.test_elem_2.map((d) => d.types));
710
- let union_types = $.derived(() => union($.get(types_1), $.get(types_2)));
711
- let tot_types = $.derived(() => $.get(types_1).length + $.get(types_2).length);
712
- let width = 200;
713
- let margin = { right: 40, top: 30, left: 40, bottom: 10 };
714
- let yPadding = 0.5;
715
- let colors = ["lightgrey", "lightblue"];
718
+ let height = $.derived(() => Math.ceil(($.get(yDomain).size + yPadding()) * 25) + marginTop() + marginBottom());
716
719
 
717
- let dat = $.proxy([
718
- {
719
- y_coord: "total count",
720
- frequency: +($.get(types_2).length / $.get(tot_types)).toFixed(3)
721
- },
722
- {
723
- y_coord: "total count",
724
- frequency: -($.get(types_1).length / $.get(tot_types)).toFixed(3)
725
- },
726
- {
727
- y_coord: "all names",
728
- frequency: +($.get(types_2).length / $.get(union_types).size).toFixed(3)
729
- },
730
- {
731
- y_coord: "all names",
732
- frequency: -($.get(types_1).length / $.get(union_types).size).toFixed(3)
733
- },
734
- {
735
- y_coord: "exclusive names",
736
- frequency: +(setdiff($.get(types_2), $.get(types_1)).size / $.get(types_2).length).toFixed(3)
737
- },
738
- {
739
- y_coord: "exclusive names",
740
- frequency: -(setdiff($.get(types_1), $.get(types_2)).size / $.get(types_1).length).toFixed(3)
741
- }
720
+ let yRange = $.derived(() => [
721
+ marginTop(),
722
+ $.get(height) - marginBottom()
742
723
  ]);
743
724
 
744
- let X = $.derived(() => dat.map((d) => d.frequency));
745
- let Y = $.derived(() => dat.map((d) => d.y_coord));
746
- let xRange = $.derived(() => [margin.left, width - margin.right]);
747
- let xDomain = $.derived(() => extent$1($.get(X)));
748
- let yDomain = $.derived(() => new InternSet($.get(Y)));
749
- let height = $.derived(() => Math.ceil(($.get(yDomain).size + yPadding) * 25) + margin.top + margin.bottom);
750
- let I = $.derived(() => range$1($.get(X).length).filter((i) => $.get(yDomain).has($.get(Y)[i])));
751
- $.derived(() => rollup($.get(I), ([i]) => $.get(X)[i], (i) => $.get(Y)[i]));
752
- let xScale = $.derived(() => scaleLinear$1($.get(xDomain), $.get(xRange)));
753
- let yScale = $.derived(() => scaleBand().domain($.get(yDomain)).range([margin.top, $.get(height) - margin.bottom]).padding(yPadding));
725
+ // Filter indices and create lookup
726
+ let I = $.derived(() => range($.get(X).length).filter((i) => $.get(yDomain).has($.get(Y)[i])));
727
+ let YX = $.derived(() => rollup($.get(I), ([i]) => $.get(X)[i], (i) => $.get(Y)[i]));
728
+ // Scales
729
+ let xScale = $.derived(() => scaleLinear($.get(xDomain), $.get(xRange)));
730
+ let yScale = $.derived(() => scaleBand().domain($.get(yDomain)).range($.get(yRange)).padding(yPadding()));
754
731
  let format = $.derived(() => $.get(xScale).tickFormat(100, "%"));
755
732
  var g = root$2();
756
- var node = $.child(g);
733
+ var g_1 = $.child(g);
734
+
735
+ $.each(g_1, 21, () => $.get(xScale).ticks(width() / 80), $.index, ($$anchor, tick) => {
736
+ var line = root_1$1();
737
+
738
+ $.template_effect(
739
+ ($0, $1) => {
740
+ $.set_attribute(line, 'x1', $0);
741
+ $.set_attribute(line, 'x2', $1);
742
+ $.set_attribute(line, 'y2', $.get(height) - marginTop() - marginBottom());
743
+ },
744
+ [
745
+ () => $.get(xScale)($.get(tick)),
746
+ () => $.get(xScale)($.get(tick))
747
+ ]
748
+ );
757
749
 
758
- $.each(node, 17, () => dat, $.index, ($$anchor, d, i) => {
759
- var fragment = root_1$1();
750
+ $.append($$anchor, line);
751
+ });
752
+
753
+ $.reset(g_1);
754
+
755
+ var node = $.sibling(g_1);
756
+
757
+ $.each(node, 17, () => $.get(I), $.index, ($$anchor, i) => {
758
+ var fragment = root_2$1();
760
759
  var rect = $.first_child(fragment);
761
- var text_1 = $.sibling(rect);
762
- var text_2 = $.child(text_1, true);
760
+ var text = $.sibling(rect);
761
+ var text_1 = $.child(text, true);
763
762
 
764
- $.reset(text_1);
763
+ $.reset(text);
765
764
 
766
765
  $.template_effect(
767
766
  ($0, $1, $2, $3, $4, $5, $6) => {
768
767
  $.set_attribute(rect, 'x', $0);
769
768
  $.set_attribute(rect, 'y', $1);
770
- $.set_attribute(rect, 'fill', colors[$.get(X)[i] > 0 ? colors.length - 1 : 0]);
769
+ $.set_attribute(rect, 'fill', colors()[$.get(X)[$.get(i)] > 0 ? colors().length - 1 : 0]);
771
770
  $.set_attribute(rect, 'width', $2);
772
771
  $.set_attribute(rect, 'height', $3);
773
- $.set_attribute(text_1, 'x', $4);
774
- $.set_attribute(text_1, 'y', $5);
775
- $.set_attribute(text_1, 'text-anchor', $.get(d).frequency < 0 ? "end" : "start");
776
- $.set_text(text_2, $6);
772
+ $.set_attribute(text, 'x', $4);
773
+ $.set_attribute(text, 'y', $5);
774
+ $.set_attribute(text, 'text-anchor', $.get(X)[$.get(i)] < 0 ? "end" : "start");
775
+ $.set_text(text_1, $6);
777
776
  },
778
777
  [
779
- () => Math.min($.get(xScale)(0), $.get(xScale)($.get(d).frequency)),
780
- () => $.get(yScale)($.get(d).y_coord),
781
- () => Math.abs($.get(xScale)($.get(d).frequency) - $.get(xScale)(0)),
778
+ () => Math.min($.get(xScale)(0), $.get(xScale)($.get(X)[$.get(i)])),
779
+ () => $.get(yScale)($.get(Y)[$.get(i)]),
780
+ () => Math.abs($.get(xScale)($.get(X)[$.get(i)]) - $.get(xScale)(0)),
782
781
  () => $.get(yScale).bandwidth(),
783
- () => $.get(xScale)($.get(X)[i]) + Math.sign($.get(X)[i] - 0) * 4,
784
- () => $.get(yScale)($.get(Y)[i]) + $.get(yScale).bandwidth() / 2,
785
- () => $.get(format)(Math.abs($.get(d).frequency))
782
+ () => $.get(xScale)($.get(X)[$.get(i)]) + Math.sign($.get(X)[$.get(i)] - 0) * 4,
783
+ () => $.get(yScale)($.get(Y)[$.get(i)]) + $.get(yScale).bandwidth() / 2,
784
+ () => $.get(format)(Math.abs($.get(X)[$.get(i)]))
786
785
  ]
787
786
  );
788
787
 
789
788
  $.append($$anchor, fragment);
790
789
  });
791
790
 
792
- var node_1 = $.sibling(node);
791
+ var g_2 = $.sibling(node);
793
792
 
794
- $.each(node_1, 17, () => $.get(yScale).domain(), $.index, ($$anchor, text) => {
795
- var g_1 = root_2$1();
796
- var text_3 = $.child(g_1);
797
- var text_4 = $.child(text_3, true);
793
+ $.each(g_2, 21, () => $.get(yScale).domain(), $.index, ($$anchor, label) => {
794
+ var text_2 = root_3$1();
795
+ var text_3 = $.child(text_2, true);
798
796
 
799
- $.reset(text_3);
800
- $.reset(g_1);
797
+ $.reset(text_2);
801
798
 
802
799
  $.template_effect(
803
800
  ($0, $1) => {
804
- $.set_attribute(text_3, 'x', $0);
805
- $.set_attribute(text_3, 'y', $1);
806
- $.set_text(text_4, $.get(text));
801
+ $.set_attribute(text_2, 'y', $0);
802
+ $.set_attribute(text_2, 'opacity', $1);
803
+ $.set_text(text_3, $.get(label));
807
804
  },
808
805
  [
809
- () => $.get(xScale)(0),
810
- () => $.get(yScale)($.get(text)) + $.get(yScale).bandwidth() / 2
806
+ () => $.get(yScale)($.get(label)) + $.get(yScale).bandwidth() / 2,
807
+ () => $.get(YX).get($.get(label)) ? "0.5" : "1"
811
808
  ]
812
809
  );
813
810
 
814
- $.append($$anchor, g_1);
811
+ $.append($$anchor, text_2);
815
812
  });
816
813
 
814
+ $.reset(g_2);
817
815
  $.reset(g);
818
- $.template_effect(() => $.set_attribute(g, 'transform', `translate(${$$props.DiamondWidth - 75}, ${$$props.DiamondHeight + 75})`));
816
+
817
+ $.template_effect(
818
+ ($0) => {
819
+ $.set_attribute(g, 'transform', `translate(${$$props.DiamondWidth - 75}, ${$$props.DiamondHeight + 75})`);
820
+ $.set_attribute(g_1, 'transform', `translate(0,${marginTop() ?? ''})`);
821
+ $.set_attribute(g_2, 'transform', `translate(${$0 ?? ''},-12)`);
822
+ },
823
+ [() => $.get(xScale)(0)]
824
+ );
825
+
819
826
  $.append($$anchor, g);
820
827
  $.pop();
821
828
  }
@@ -829,19 +836,16 @@ function Legend($$anchor, $$props) {
829
836
  $.push($$props, true);
830
837
 
831
838
  const N_CATEGO = 20;
832
- const myramp = range$1(N_CATEGO).map((i) => rgb(interpolateInferno(i / (N_CATEGO - 1))).hex());
833
- const color = scaleOrdinal(range$1(N_CATEGO), myramp);
839
+ const myramp = range(N_CATEGO).map((i) => rgb(interpolateInferno(i / (N_CATEGO - 1))).hex());
840
+ const color = scaleOrdinal(range(N_CATEGO), myramp);
834
841
  let height = 370;
835
842
  const margin = { right: 40, top: 65, left: 10 };
836
843
  let innerHeight = $.derived(() => height - margin.top - margin.right);
837
844
  let max_rank = $.derived(() => max($$props.diamond_dat, (d) => d.rank_L[1]));
838
845
  let y = $.derived(() => scaleBand().domain(color.domain().reverse()).rangeRound([0, $.get(innerHeight)]));
839
-
840
- let logY = $.derived(() => scaleLog().domain([
841
- 1,
842
- 10 ** Math.ceil(Math.max(Math.log10($.get(max_rank))) - 1)
843
- ]).rangeRound([0, $.get(innerHeight)]).nice());
844
-
846
+ // Use max_count_log if provided, otherwise calculate from data
847
+ let logDomain = $.derived(() => $$props.max_count_log || 10 ** Math.ceil(Math.log10($.get(max_rank)) - 1));
848
+ let logY = $.derived(() => scaleLog().domain([1, $.get(logDomain)]).rangeRound([0, $.get(innerHeight)]).nice());
845
849
  let logFormat10 = $.derived(() => $.get(logY).tickFormat());
846
850
  let yTicks = $.derived(() => $.get(logY).ticks());
847
851
  var fragment = root$1();
@@ -926,22 +930,25 @@ function Legend($$anchor, $$props) {
926
930
  var root = $.from_html(`<div><svg id="allotaxonometer-svg" class="svelte-n6o6ey"><!><!><!><!></svg></div>`);
927
931
 
928
932
  function Dashboard($$anchor, $$props) {
929
- let diamond_count = $.prop($$props, 'diamond_count', 19, () => []),
930
- diamond_dat = $.prop($$props, 'diamond_dat', 19, () => []),
933
+ $.push($$props, true);
934
+
935
+ let dat = $.prop($$props, 'dat', 3, null),
936
+ alpha = $.prop($$props, 'alpha', 3, 0.58),
937
+ divnorm = $.prop($$props, 'divnorm', 3, 1),
931
938
  barData = $.prop($$props, 'barData', 19, () => []),
932
- test_elem_1 = $.prop($$props, 'test_elem_1', 3, null),
933
- test_elem_2 = $.prop($$props, 'test_elem_2', 3, null),
939
+ balanceData = $.prop($$props, 'balanceData', 19, () => []),
940
+ xDomain = $.prop($$props, 'xDomain', 3, undefined),
941
+ title = $.prop($$props, 'title', 19, () => ['System 1', 'System 2']),
942
+ maxlog10 = $.prop($$props, 'maxlog10', 3, 0),
934
943
  height = $.prop($$props, 'height', 3, 815),
935
944
  width = $.prop($$props, 'width', 3, 1200),
945
+ DashboardHeight = $.prop($$props, 'DashboardHeight', 3, 815),
946
+ DashboardWidth = $.prop($$props, 'DashboardWidth', 3, 1200),
936
947
  DiamondHeight = $.prop($$props, 'DiamondHeight', 3, 600),
937
948
  DiamondWidth = $.prop($$props, 'DiamondWidth', 3, 600),
938
- DiamondInnerHeight = $.prop($$props, 'DiamondInnerHeight', 3, 440),
939
- margin = $.prop($$props, 'margin', 19, () => ({ inner: 160, diamond: 40 })),
940
- trueDiamondHeight = $.prop($$props, 'trueDiamondHeight', 3, 400),
941
- alpha = $.prop($$props, 'alpha', 3, 0.58),
942
- maxlog10 = $.prop($$props, 'maxlog10', 3, 0),
943
- rtd = $.prop($$props, 'rtd', 3, null),
944
- title = $.prop($$props, 'title', 19, () => ['System 1', 'System 2']),
949
+ marginInner = $.prop($$props, 'marginInner', 3, 160),
950
+ marginDiamond = $.prop($$props, 'marginDiamond', 3, 40),
951
+ max_count_log = $.prop($$props, 'max_count_log', 3, undefined),
945
952
  className = $.prop($$props, 'class', 3, ''),
946
953
  style = $.prop($$props, 'style', 3, ''),
947
954
  showDiamond = $.prop($$props, 'showDiamond', 3, true),
@@ -952,22 +959,23 @@ function Dashboard($$anchor, $$props) {
952
959
  '$$slots',
953
960
  '$$events',
954
961
  '$$legacy',
955
- 'diamond_count',
956
- 'diamond_dat',
962
+ 'dat',
963
+ 'alpha',
964
+ 'divnorm',
957
965
  'barData',
958
- 'test_elem_1',
959
- 'test_elem_2',
966
+ 'balanceData',
967
+ 'xDomain',
968
+ 'title',
969
+ 'maxlog10',
960
970
  'height',
961
971
  'width',
972
+ 'DashboardHeight',
973
+ 'DashboardWidth',
962
974
  'DiamondHeight',
963
975
  'DiamondWidth',
964
- 'DiamondInnerHeight',
965
- 'margin',
966
- 'trueDiamondHeight',
967
- 'alpha',
968
- 'maxlog10',
969
- 'rtd',
970
- 'title',
976
+ 'marginInner',
977
+ 'marginDiamond',
978
+ 'max_count_log',
971
979
  'class',
972
980
  'style',
973
981
  'showDiamond',
@@ -976,6 +984,13 @@ function Dashboard($$anchor, $$props) {
976
984
  'showLegend'
977
985
  ]);
978
986
 
987
+ let max_shift = $.derived(() => barData().length > 0 ? Math.max(...barData().map((d) => Math.abs(d.metric))) : 1);
988
+
989
+ let wordshiftXDomain = $.derived(() => xDomain() || [
990
+ -$.get(max_shift) * 1.5,
991
+ $.get(max_shift) * 1.5
992
+ ]);
993
+
979
994
  var div = root();
980
995
 
981
996
  $.attribute_effect(
@@ -995,38 +1010,35 @@ function Dashboard($$anchor, $$props) {
995
1010
  {
996
1011
  var consequent = ($$anchor) => {
997
1012
  Diamond($$anchor, {
998
- get diamond_count() {
999
- return diamond_count();
1000
- },
1001
- get diamond_dat() {
1002
- return diamond_dat();
1003
- },
1004
- get DiamondInnerHeight() {
1005
- return DiamondInnerHeight();
1006
- },
1007
- get margin() {
1008
- return margin();
1009
- },
1010
- get trueDiamondHeight() {
1011
- return trueDiamondHeight();
1013
+ get dat() {
1014
+ return dat();
1012
1015
  },
1013
1016
  get alpha() {
1014
1017
  return alpha();
1015
1018
  },
1019
+ get divnorm() {
1020
+ return divnorm();
1021
+ },
1022
+ get title() {
1023
+ return title();
1024
+ },
1016
1025
  get maxlog10() {
1017
1026
  return maxlog10();
1018
1027
  },
1019
- get rtd() {
1020
- return rtd();
1028
+ get DiamondHeight() {
1029
+ return DiamondHeight();
1030
+ },
1031
+ get marginInner() {
1032
+ return marginInner();
1021
1033
  },
1022
- get title() {
1023
- return title();
1034
+ get marginDiamond() {
1035
+ return marginDiamond();
1024
1036
  }
1025
1037
  });
1026
1038
  };
1027
1039
 
1028
1040
  $.if(node, ($$render) => {
1029
- if (showDiamond()) $$render(consequent);
1041
+ if (showDiamond() && dat()) $$render(consequent);
1030
1042
  });
1031
1043
  }
1032
1044
 
@@ -1039,16 +1051,21 @@ function Dashboard($$anchor, $$props) {
1039
1051
  return barData();
1040
1052
  },
1041
1053
  get DashboardHeight() {
1042
- return height();
1054
+ return DashboardHeight();
1043
1055
  },
1044
1056
  get DashboardWidth() {
1045
- return width();
1046
- }
1057
+ return DashboardWidth();
1058
+ },
1059
+ get xDomain() {
1060
+ return $.get(wordshiftXDomain);
1061
+ },
1062
+ width: 640,
1063
+ marginLeft: 140
1047
1064
  });
1048
1065
  };
1049
1066
 
1050
1067
  $.if(node_1, ($$render) => {
1051
- if (showWordshift()) $$render(consequent_1);
1068
+ if (showWordshift() && barData().length > 0) $$render(consequent_1);
1052
1069
  });
1053
1070
  }
1054
1071
 
@@ -1057,11 +1074,8 @@ function Dashboard($$anchor, $$props) {
1057
1074
  {
1058
1075
  var consequent_2 = ($$anchor) => {
1059
1076
  DivergingBarChart($$anchor, {
1060
- get test_elem_1() {
1061
- return test_elem_1();
1062
- },
1063
- get test_elem_2() {
1064
- return test_elem_2();
1077
+ get data() {
1078
+ return balanceData();
1065
1079
  },
1066
1080
  get DiamondHeight() {
1067
1081
  return DiamondHeight();
@@ -1073,7 +1087,7 @@ function Dashboard($$anchor, $$props) {
1073
1087
  };
1074
1088
 
1075
1089
  $.if(node_2, ($$render) => {
1076
- if (showDivergingBar()) $$render(consequent_2);
1090
+ if (showDivergingBar() && balanceData().length > 0) $$render(consequent_2);
1077
1091
  });
1078
1092
  }
1079
1093
 
@@ -1083,16 +1097,19 @@ function Dashboard($$anchor, $$props) {
1083
1097
  var consequent_3 = ($$anchor) => {
1084
1098
  Legend($$anchor, {
1085
1099
  get diamond_dat() {
1086
- return diamond_dat();
1100
+ return dat().counts;
1087
1101
  },
1088
1102
  get DiamondHeight() {
1089
1103
  return DiamondHeight();
1104
+ },
1105
+ get max_count_log() {
1106
+ return max_count_log();
1090
1107
  }
1091
1108
  });
1092
1109
  };
1093
1110
 
1094
1111
  $.if(node_3, ($$render) => {
1095
- if (showLegend()) $$render(consequent_3);
1112
+ if (showLegend() && dat()) $$render(consequent_3);
1096
1113
  });
1097
1114
  }
1098
1115
 
@@ -1105,6 +1122,667 @@ function Dashboard($$anchor, $$props) {
1105
1122
  });
1106
1123
 
1107
1124
  $.append($$anchor, div);
1125
+ $.pop();
1126
+ }
1127
+
1128
+ // Takes arrays, returns a Set object containing the union of both arrays
1129
+ function getUnions(x,y) {
1130
+ let a = new Set(x); // convert array x to a Set object
1131
+ let b = new Set(y); // convert array y to a Set object
1132
+ return new Set([...a, ...b]); // return a new Set object containing the union of a and b
1133
+ }
1134
+
1135
+ // Takes arrays, returns a Set object
1136
+ function setdiff(x,y) {
1137
+ let a = new Set(x); // convert array x to a Set object
1138
+ let b = new Set(y); // convert array y to a Set object
1139
+ // return a new Set object containing elements in a that are not present in b
1140
+ return new Set(
1141
+ [...a].filter(x => !b.has(x)));
1142
+ }
1143
+
1144
+ function which(x) {
1145
+ // Which indices are TRUE?
1146
+ // Description:
1147
+ // Give the ‘TRUE’ indices of a logical object, allowing for array indices.
1148
+ // Arguments:
1149
+ // x: a ‘logical’ vector or array.
1150
+ return x.reduce(
1151
+ (out, bool, index) => bool ? out.concat(index) : out,
1152
+ []
1153
+ )
1154
+ }
1155
+
1156
+
1157
+ function matlab_sort(A, rev) {
1158
+ // Inspired by matlab, this functions keep track of the original indices of an array after sorting.
1159
+ // Returns both the sorted vector `v` and the original indices.
1160
+ //
1161
+ // examples
1162
+ // A = [5, 4, 1, 2, 3]
1163
+ // ([1, 2, 3, 3, 4, 5], [3, 4, 5, 6, 2, 1])
1164
+
1165
+ let sorted = rev ? A.slice().sort((a, b) => b - a) : A.slice().sort((a, b) => a - b);
1166
+
1167
+ const A_cp = A.slice();
1168
+ const orig_idx = [];
1169
+ for (let i = 0; i < A.length; ++i) {
1170
+ orig_idx.push(A_cp.indexOf(sorted[i]));
1171
+ delete A_cp[A_cp.indexOf(sorted[i])];
1172
+ }
1173
+
1174
+ return {'value': sorted, 'orig_idx': orig_idx}
1175
+ }
1176
+
1177
+ function tiedrank(arr) {
1178
+ // tiedrank(X) computes the ranks of the values in the vector X. If any X values are tied, tiedrank computes their average rank. Same as in matlab.
1179
+ function getIndex(arr, val) {
1180
+ var indexes = [], i;
1181
+ for(i = 0; i < arr.length; i++)
1182
+ if (arr[i] === val)
1183
+ indexes.push(i+1);
1184
+ return indexes.reduce((a, b) => a + b) / indexes.length;
1185
+ }
1186
+
1187
+ const sorted = arr.slice().sort((a, b) => b - a);
1188
+ return arr.map(e => getIndex(sorted, e))
1189
+ }
1190
+
1191
+ function rank_maxlog10(mixedelements) {
1192
+ // Get maximum of log10 ranks from both systems, then round up
1193
+ let logged_max = [
1194
+ Math.max(...mixedelements[[0]].ranks), Math.max(...mixedelements[[1]].ranks)
1195
+ ].map(Math.log10);
1196
+ return Math.ceil(Math.max(...[logged_max[0], logged_max[1]]))
1197
+ }
1198
+
1199
+ function rin(arr1, arr2) {
1200
+ // Find element arr1 presents in arr2, i.e. arr1 %in% arr2
1201
+ //
1202
+ // examples
1203
+ // A = ["bob", "george", "jesus"]
1204
+ // B = ["bob", "jesus", "terrence"]
1205
+ // rin(A, B)
1206
+ // [true, false, true]
1207
+ return Array.from(arr1, (x) => {
1208
+ return arr2.indexOf(x) == -1 ? false : true
1209
+ })
1210
+ }
1211
+
1212
+ function zeros(length){
1213
+ // Create array of all zeros. Similar to matlab.
1214
+ function createArray(length) {
1215
+ var arr = new Array(length || 0),
1216
+ i = length;
1217
+ if (arguments.length > 1) {
1218
+ var args = Array.prototype.slice.call(arguments, 1);
1219
+ while(i--) arr[length-1 - i] = createArray.apply(this, args);
1220
+ }
1221
+ return arr;
1222
+ }
1223
+ let empty_mat = createArray(length,length);
1224
+ return Array.from(empty_mat, arr => arr.fill(0))
1225
+ }
1226
+
1227
+ // Builds a mixed element array containing the union of types in elem1 and elem2
1228
+ function buildMixedElems(elem1, elem2) {
1229
+ const mixedelem = [[], []];
1230
+ const x = elem1.map(d=>d.types); // extract types from elem1
1231
+ const y = elem2.map(d=>d.types); // extract types from elem
1232
+ const union = Array.from(getUnions(x,y)); // get the union of x and y
1233
+ mixedelem[0]['types'] = union; // store union in mixedelem array for elem1
1234
+ mixedelem[1]['types'] = union; // store union in mixedelem array for elem2
1235
+ return mixedelem // return mixedelem array
1236
+ }
1237
+
1238
+ // Combine elements and return a combined array containing counts, ranks, probs, and totalunique
1239
+ function combElems(elem1, elem2) {
1240
+ const mixedelem = buildMixedElems(elem1, elem2); // build mixed elements array
1241
+ const enum_list = [elem1, elem2]; // list containing elem1 and elem2
1242
+
1243
+ for (let j=0; j < enum_list.length; j++) {
1244
+ const enumlist_types = enum_list[j].map(d => d.types); // extract types from enum_list[j]
1245
+ const counts = new Array(mixedelem[j]['types'].length); // initialize counts array
1246
+ const probs = new Array(mixedelem[j]['types'].length); // initialize probs array
1247
+
1248
+
1249
+ // for each index in mixed elem[j], which is the union of both systems
1250
+ for (let i=0; i < mixedelem[j]['types'].length; i++) { // find the index of type mixedelem[j]['types'][i] in system 1 or 2
1251
+ // find the index of type mixedelem[j]['types'][i] in system 1 or 2
1252
+ let idx_type_enumlist_in_elem = enumlist_types.indexOf(mixedelem[j]['types'][i]);
1253
+ // if it exists, grabs counts and probs information else put a 0.
1254
+ counts[i] = idx_type_enumlist_in_elem === -1 ? 0 : enum_list[j][idx_type_enumlist_in_elem]["counts"];
1255
+ probs[i] = idx_type_enumlist_in_elem === -1 ? 0 : enum_list[j][idx_type_enumlist_in_elem]["probs"];
1256
+ }
1257
+
1258
+
1259
+ // store counts, ranks, probs, and totalunique in mixedelem array for elem1 or elem2
1260
+ mixedelem[j]['counts'] = counts;
1261
+ mixedelem[j]['ranks'] = tiedrank(mixedelem[j]['counts']);
1262
+ mixedelem[j]['probs'] = probs;
1263
+ mixedelem[j]['totalunique'] = getUnions().length;
1264
+
1265
+ }
1266
+
1267
+ return mixedelem // return mixedelem array
1268
+ }
1269
+
1270
+ // helpers to wrangle data for the balance plot
1271
+ function balanceDat(elem1, elem2) {
1272
+ const types_1 = elem1.map(d => d.types);
1273
+ const types_2 = elem2.map(d => d.types);
1274
+
1275
+ const union_types = getUnions(types_1, types_2);
1276
+ const tot_types = types_1.length+types_2.length;
1277
+
1278
+ return [
1279
+ { y_coord: "total count", frequency: +(types_2.length / tot_types).toFixed(3) },
1280
+ { y_coord: "total count", frequency: -(types_1.length / tot_types).toFixed(3) },
1281
+ { y_coord: "all names", frequency: +(types_2.length / union_types.size).toFixed(3) },
1282
+ { y_coord: "all names", frequency: -(types_1.length / union_types.size).toFixed(3) },
1283
+ { y_coord: "exclusive names", frequency: +(setdiff(types_2, types_1).size / types_2.length).toFixed(3) },
1284
+ { y_coord: "exclusive names", frequency: -(setdiff(types_1, types_2).size / types_1.length).toFixed(3) }
1285
+ ]
1286
+ }
1287
+
1288
+ // helper to wrangle the data for the wordshift plot
1289
+ function wordShift_dat(me, dat) {
1290
+ const out = [];
1291
+ for (let i=0; i < me[0]['types'].length; i++) {
1292
+ const rank_diff = me[0]['ranks'][i]-me[1]['ranks'][i];
1293
+ out.push({
1294
+ 'type': `${me[0]['types'][i]} (${me[0]['ranks'][i]} ⇋ ${me[1]['ranks'][i]})` ,
1295
+ 'rank_diff': rank_diff,
1296
+ 'metric': rank_diff < 0 ? -dat.deltas[i] : dat.deltas[i],
1297
+ });
1298
+ }
1299
+
1300
+ return out.slice().sort((a, b) => descending(Math.abs(a.metric), Math.abs(b.metric)))
1301
+ }
1302
+
1303
+ // This function calculates the divergence between two arrays of inverse ranks
1304
+ // based on the specified alpha value. If alpha is equal to infinity, it returns
1305
+ // an array with the maximum of each element in inv_r1 and inv_r2. If alpha is
1306
+ // equal to 0, it returns an array with the log of the ratio of the maximum and
1307
+ // minimum of 1/inv_r1 and 1/inv_r2 for each element. Otherwise, it returns an
1308
+ // array with the absolute value of (alpha + 1)/alpha * (inv_r1^alpha - inv_r2^alpha)^(1/(alpha + 1))
1309
+ // for each element.
1310
+
1311
+ function divElems(inv_r1, inv_r2, alpha) {
1312
+ if (alpha === Infinity) {
1313
+ return inv_r1.map((d,i) => inv_r1[i] == inv_r2[i] ? 0 : Math.max(inv_r1[i], inv_r2[i]))
1314
+ } else if (alpha == 0) {
1315
+ const x_max = inv_r1.map((d,i) => Math.max(1 / inv_r1[i], 1 / inv_r2[i]));
1316
+ const x_min = inv_r1.map((d,i) => Math.min(1 / inv_r1[i], 1 / inv_r2[i]));
1317
+ return inv_r1.map((d,i) => Math.log10(x_max[i] / x_min[i]))
1318
+ } else {
1319
+ return inv_r1.map((d,i) => (alpha+1) / alpha * Math.abs(inv_r1[i]**alpha - inv_r2[i]**alpha)**(1. / (alpha+1)))
1320
+ }
1321
+ }
1322
+
1323
+ // This function calculates the normalization factor for the divergence between
1324
+ // two arrays of inverse ranks. It first extracts the counts from the mixedelements
1325
+ // parameter and finds the indices where the counts are greater than 0. It then
1326
+ // calculates the disjoint set for each array based on the number of non-zero
1327
+ // counts. If alpha is equal to infinity, it returns the sum of the elements in
1328
+ // inv_r1 and inv_r2 for the indices with non-zero counts. If alpha is equal to
1329
+ // 0, it returns the sum of the absolute value of the log of the ratio of each
1330
+ // element in inv_r1 and the disjoint set for inv_r2, and the absolute value of
1331
+ // the log of the ratio of each element in inv_r2 and the disjoint set for inv_r1.
1332
+ // Otherwise, it returns the sum of (alpha + 1)/alpha * (inv_r1^alpha - disjoint set^alpha)^(1/(alpha + 1))
1333
+ // for each element in inv_r1, and the same for inv_r2.
1334
+
1335
+ function norm_divElems(mixedelements, inv_r1, inv_r2, alpha) {
1336
+ const c1 = mixedelements[0]['counts'];
1337
+ const c2 = mixedelements[1]['counts'];
1338
+
1339
+ const indices1 = which(c1.map(d => d > 0));
1340
+ const indices2 = which(c2.map(d => d > 0));
1341
+
1342
+ const N1 = indices1.length;
1343
+ const N2 = indices2.length;
1344
+
1345
+ // This function calculates the disjoint set for a given array of inverse ranks
1346
+ // based on the number of non-zero counts in the array and the number of non-zero
1347
+ // counts in the other array. It returns 1/(number of non-zero counts in other array +
1348
+ // number of non-zero counts in this array/2)
1349
+
1350
+ function calc_disjoint(N1, N2) {
1351
+ return( 1 / (N2 + N1/2) )
1352
+ }
1353
+
1354
+ const inv_r1_disjoint = calc_disjoint(N1, N2);
1355
+ const inv_r2_disjoint = calc_disjoint(N2, N1);
1356
+
1357
+ if (alpha === Infinity) {
1358
+
1359
+ return sum(indices1.map((i) => inv_r1[i])) + sum(indices2.map((i) => inv_r2[i]))
1360
+
1361
+ } else if (alpha === 0) {
1362
+ const term1 = sum(
1363
+ indices1.map((i) => Math.abs(Math.log(inv_r1[i] / inv_r2_disjoint)))
1364
+ );
1365
+ const term2 = sum(
1366
+ indices2.map((i) => Math.abs(Math.log(inv_r2[i] / inv_r1_disjoint)))
1367
+ );
1368
+ return term1 + term2
1369
+ } else {
1370
+ const term1 = (alpha+1)/alpha * sum(
1371
+ indices1.map((i) => inv_r1[i]).map( d => (Math.abs(d**alpha) - inv_r2_disjoint**alpha)**(1./(alpha+1) ))
1372
+ );
1373
+ const term2 = (alpha+1)/alpha * sum(
1374
+ indices2.map((i) => inv_r2[i]).map(d => Math.abs(inv_r1_disjoint**alpha - d**alpha)**(1. / (alpha+1)))
1375
+ );
1376
+ return term1 + term2
1377
+ }
1378
+ }
1379
+
1380
+ // This function calculates the rank turbulence divergence for two arrays of mixed
1381
+ // elements, using the specified alpha value. It first calculates the arrays of
1382
+ // inverse ranks for each mixed element array and then calculates the divergence
1383
+ // and normalization factors using the divElems and norm_divElems functions. It
1384
+ // returns the divergence divided by the normalization.
1385
+
1386
+ function rank_turbulence_divergence(mixedelements, alpha) {
1387
+
1388
+ const inv_r1 = mixedelements[0]['ranks'].map(d => Math.pow(d, -1));
1389
+ const inv_r2 = mixedelements[1]['ranks'].map(d => Math.pow(d, -1));
1390
+
1391
+ const divergence_elements = divElems(inv_r1, inv_r2, alpha);
1392
+ const normalization = norm_divElems(mixedelements, inv_r1, inv_r2, alpha);
1393
+
1394
+ return { // the divergence used to wordshift dat to sort name in wordshift plot
1395
+ // is equal to the formula in the upperleft of the diamond plot. However
1396
+ // the formula is a proportionality and miss the normalization constant
1397
+ // shown here.
1398
+ // Example: for alpha = infinity, for the rank 1 names on both systems, the formula as written is equal to max(1/1, 1/former_rank) = 1/1 =1
1399
+ // this value of 1 is then divided by the normalization constant.
1400
+ // this constant of proportionality is the reason for the difference between the 1/1 that the written formula gives you
1401
+ // and the decimal value that wordshift_dat states and which is actuallly used to sort the types.
1402
+ 'divergence_elements': divergence_elements.map(d => d / normalization),
1403
+ 'normalization': normalization
1404
+ }
1405
+ }
1406
+
1407
+ const VOID = -1;
1408
+ const PRIMITIVE = 0;
1409
+ const ARRAY = 1;
1410
+ const OBJECT = 2;
1411
+ const DATE = 3;
1412
+ const REGEXP = 4;
1413
+ const MAP = 5;
1414
+ const SET = 6;
1415
+ const ERROR = 7;
1416
+ const BIGINT = 8;
1417
+ // export const SYMBOL = 9;
1418
+
1419
+ const env = typeof self === 'object' ? self : globalThis;
1420
+
1421
+ const deserializer = ($, _) => {
1422
+ const as = (out, index) => {
1423
+ $.set(index, out);
1424
+ return out;
1425
+ };
1426
+
1427
+ const unpair = index => {
1428
+ if ($.has(index))
1429
+ return $.get(index);
1430
+
1431
+ const [type, value] = _[index];
1432
+ switch (type) {
1433
+ case PRIMITIVE:
1434
+ case VOID:
1435
+ return as(value, index);
1436
+ case ARRAY: {
1437
+ const arr = as([], index);
1438
+ for (const index of value)
1439
+ arr.push(unpair(index));
1440
+ return arr;
1441
+ }
1442
+ case OBJECT: {
1443
+ const object = as({}, index);
1444
+ for (const [key, index] of value)
1445
+ object[unpair(key)] = unpair(index);
1446
+ return object;
1447
+ }
1448
+ case DATE:
1449
+ return as(new Date(value), index);
1450
+ case REGEXP: {
1451
+ const {source, flags} = value;
1452
+ return as(new RegExp(source, flags), index);
1453
+ }
1454
+ case MAP: {
1455
+ const map = as(new Map, index);
1456
+ for (const [key, index] of value)
1457
+ map.set(unpair(key), unpair(index));
1458
+ return map;
1459
+ }
1460
+ case SET: {
1461
+ const set = as(new Set, index);
1462
+ for (const index of value)
1463
+ set.add(unpair(index));
1464
+ return set;
1465
+ }
1466
+ case ERROR: {
1467
+ const {name, message} = value;
1468
+ return as(new env[name](message), index);
1469
+ }
1470
+ case BIGINT:
1471
+ return as(BigInt(value), index);
1472
+ case 'BigInt':
1473
+ return as(Object(BigInt(value)), index);
1474
+ case 'ArrayBuffer':
1475
+ return as(new Uint8Array(value).buffer, value);
1476
+ case 'DataView': {
1477
+ const { buffer } = new Uint8Array(value);
1478
+ return as(new DataView(buffer), value);
1479
+ }
1480
+ }
1481
+ return as(new env[type](value), index);
1482
+ };
1483
+
1484
+ return unpair;
1485
+ };
1486
+
1487
+ /**
1488
+ * @typedef {Array<string,any>} Record a type representation
1489
+ */
1490
+
1491
+ /**
1492
+ * Returns a deserialized value from a serialized array of Records.
1493
+ * @param {Record[]} serialized a previously serialized value.
1494
+ * @returns {any}
1495
+ */
1496
+ const deserialize = serialized => deserializer(new Map, serialized)(0);
1497
+
1498
+ const EMPTY = '';
1499
+
1500
+ const {toString} = {};
1501
+ const {keys} = Object;
1502
+
1503
+ const typeOf = value => {
1504
+ const type = typeof value;
1505
+ if (type !== 'object' || !value)
1506
+ return [PRIMITIVE, type];
1507
+
1508
+ const asString = toString.call(value).slice(8, -1);
1509
+ switch (asString) {
1510
+ case 'Array':
1511
+ return [ARRAY, EMPTY];
1512
+ case 'Object':
1513
+ return [OBJECT, EMPTY];
1514
+ case 'Date':
1515
+ return [DATE, EMPTY];
1516
+ case 'RegExp':
1517
+ return [REGEXP, EMPTY];
1518
+ case 'Map':
1519
+ return [MAP, EMPTY];
1520
+ case 'Set':
1521
+ return [SET, EMPTY];
1522
+ case 'DataView':
1523
+ return [ARRAY, asString];
1524
+ }
1525
+
1526
+ if (asString.includes('Array'))
1527
+ return [ARRAY, asString];
1528
+
1529
+ if (asString.includes('Error'))
1530
+ return [ERROR, asString];
1531
+
1532
+ return [OBJECT, asString];
1533
+ };
1534
+
1535
+ const shouldSkip = ([TYPE, type]) => (
1536
+ TYPE === PRIMITIVE &&
1537
+ (type === 'function' || type === 'symbol')
1538
+ );
1539
+
1540
+ const serializer = (strict, json, $, _) => {
1541
+
1542
+ const as = (out, value) => {
1543
+ const index = _.push(out) - 1;
1544
+ $.set(value, index);
1545
+ return index;
1546
+ };
1547
+
1548
+ const pair = value => {
1549
+ if ($.has(value))
1550
+ return $.get(value);
1551
+
1552
+ let [TYPE, type] = typeOf(value);
1553
+ switch (TYPE) {
1554
+ case PRIMITIVE: {
1555
+ let entry = value;
1556
+ switch (type) {
1557
+ case 'bigint':
1558
+ TYPE = BIGINT;
1559
+ entry = value.toString();
1560
+ break;
1561
+ case 'function':
1562
+ case 'symbol':
1563
+ if (strict)
1564
+ throw new TypeError('unable to serialize ' + type);
1565
+ entry = null;
1566
+ break;
1567
+ case 'undefined':
1568
+ return as([VOID], value);
1569
+ }
1570
+ return as([TYPE, entry], value);
1571
+ }
1572
+ case ARRAY: {
1573
+ if (type) {
1574
+ let spread = value;
1575
+ if (type === 'DataView') {
1576
+ spread = new Uint8Array(value.buffer);
1577
+ }
1578
+ else if (type === 'ArrayBuffer') {
1579
+ spread = new Uint8Array(value);
1580
+ }
1581
+ return as([type, [...spread]], value);
1582
+ }
1583
+
1584
+ const arr = [];
1585
+ const index = as([TYPE, arr], value);
1586
+ for (const entry of value)
1587
+ arr.push(pair(entry));
1588
+ return index;
1589
+ }
1590
+ case OBJECT: {
1591
+ if (type) {
1592
+ switch (type) {
1593
+ case 'BigInt':
1594
+ return as([type, value.toString()], value);
1595
+ case 'Boolean':
1596
+ case 'Number':
1597
+ case 'String':
1598
+ return as([type, value.valueOf()], value);
1599
+ }
1600
+ }
1601
+
1602
+ if (json && ('toJSON' in value))
1603
+ return pair(value.toJSON());
1604
+
1605
+ const entries = [];
1606
+ const index = as([TYPE, entries], value);
1607
+ for (const key of keys(value)) {
1608
+ if (strict || !shouldSkip(typeOf(value[key])))
1609
+ entries.push([pair(key), pair(value[key])]);
1610
+ }
1611
+ return index;
1612
+ }
1613
+ case DATE:
1614
+ return as([TYPE, value.toISOString()], value);
1615
+ case REGEXP: {
1616
+ const {source, flags} = value;
1617
+ return as([TYPE, {source, flags}], value);
1618
+ }
1619
+ case MAP: {
1620
+ const entries = [];
1621
+ const index = as([TYPE, entries], value);
1622
+ for (const [key, entry] of value) {
1623
+ if (strict || !(shouldSkip(typeOf(key)) || shouldSkip(typeOf(entry))))
1624
+ entries.push([pair(key), pair(entry)]);
1625
+ }
1626
+ return index;
1627
+ }
1628
+ case SET: {
1629
+ const entries = [];
1630
+ const index = as([TYPE, entries], value);
1631
+ for (const entry of value) {
1632
+ if (strict || !shouldSkip(typeOf(entry)))
1633
+ entries.push(pair(entry));
1634
+ }
1635
+ return index;
1636
+ }
1637
+ }
1638
+
1639
+ const {message} = value;
1640
+ return as([TYPE, {name: type, message}], value);
1641
+ };
1642
+
1643
+ return pair;
1644
+ };
1645
+
1646
+ /**
1647
+ * @typedef {Array<string,any>} Record a type representation
1648
+ */
1649
+
1650
+ /**
1651
+ * Returns an array of serialized Records.
1652
+ * @param {any} value a serializable value.
1653
+ * @param {{json?: boolean, lossy?: boolean}?} options an object with a `lossy` or `json` property that,
1654
+ * if `true`, will not throw errors on incompatible types, and behave more
1655
+ * like JSON stringify would behave. Symbol and Function will be discarded.
1656
+ * @returns {Record[]}
1657
+ */
1658
+ const serialize = (value, {json, lossy} = {}) => {
1659
+ const _ = [];
1660
+ return serializer(!(json || lossy), !!json, new Map, _)(value), _;
1661
+ };
1662
+
1663
+ /**
1664
+ * @typedef {Array<string,any>} Record a type representation
1665
+ */
1666
+
1667
+ /**
1668
+ * Returns an array of serialized Records.
1669
+ * @param {any} any a serializable value.
1670
+ * @param {{transfer?: any[], json?: boolean, lossy?: boolean}?} options an object with
1671
+ * a transfer option (ignored when polyfilled) and/or non standard fields that
1672
+ * fallback to the polyfill if present.
1673
+ * @returns {Record[]}
1674
+ */
1675
+ const structuredClone$1 = typeof structuredClone === "function" ?
1676
+ /* c8 ignore start */
1677
+ (any, options) => (
1678
+ options && ('json' in options || 'lossy' in options) ?
1679
+ deserialize(serialize(any, options)) : structuredClone(any)
1680
+ ) :
1681
+ (any, options) => deserialize(serialize(any, options));
1682
+
1683
+ function rank2coord(rank) { return Math.floor(Math.log10(rank) / (1/15)) }
1684
+
1685
+ // Augment information already in `me` class with coordinates.
1686
+ function diamond_counts(mixedelements) {
1687
+
1688
+ let maxlog10 = rank_maxlog10(mixedelements); // max of values of me[system]['rank'] in logspace
1689
+
1690
+ if (maxlog10 < 1) {
1691
+ maxlog10 = 1;
1692
+ }
1693
+
1694
+ const CELL_LENGTH = 1/15;
1695
+ const Ncells = Math.floor(maxlog10/CELL_LENGTH) + 1;
1696
+
1697
+ // me = mixed elements which is of the form:
1698
+ // [array_from_system_L, array_from_system_R]
1699
+ // where each array is of the form [types:{types}, counts:{counts}, ranks:{ranks}, probs:{probs}, totalunique]
1700
+ // where types is in the order [rank1TypeFromL, rank1TypeFromR, ... rankMaxTypeFromL, rankMaxTypeFromR] and if there is a tie it goes ... ranknTypeFromL, ranknTypeFromR_1, ranknTypeFromR_2, ranknplus1TypeFromL ... Example 1880-2015 charlie and clarence tie from left
1701
+ // counts, ranks, and probs are correct corresponding to the types
1702
+ const x1s = mixedelements[0]['ranks'].map(r => rank2coord(r)); // Math.floor(Math.log10(rank) / (1/15))
1703
+ const y1s = mixedelements[1]['ranks'].map(r => rank2coord(r));
1704
+
1705
+ // all the combination of coords that exists. There are many duplicated coords.
1706
+ const existing_coords = Array.from(mixedelements[0]['ranks'], (d,i) => { return `(${x1s[i]}, ${y1s[i]})` }); // for i in range(len(me[0]['ranks'])), existing_coords.append('x1s[i], y1s[i]'). or alternatively existing_coords = [str(pair) for pair in zip(x1s, y1s)]
1707
+ // note we make this a tring so that indexOf works later. In python we would use a 2-tuple
1708
+
1709
+ // return existing_coords
1710
+
1711
+ const out = [];
1712
+ // iterate through each cell
1713
+ for (var i=0; i < Ncells; i++) { // Ncells is the length of the square matrix (note 1-d length not total number of cells)
1714
+ for (var j=0; j < Ncells; j++) {
1715
+
1716
+ // Does coords (i,j) are in existing_coords?
1717
+ if ( existing_coords.indexOf(`(${i}, ${j})`) === -1) {
1718
+ out.push({ types: "", x1: i, y1: j, rank1: "", rank2: "" }); // if it doesnt exist, thats a blank cell, make the data there blank
1719
+ } else { //if that coordinate is full of data
1720
+ const indices_coords_in_exist_coords = which(rin(existing_coords, `(${i}, ${j})`)); //rin(arr1, arr2) = [foo is in arr2 for foo in arr1]. rin([3, 4, 5], [3]) = [true, false, false], then the which is returning the indices of the elements which are true. So in the end this is getting all the indices where '${i}, ${j})' appears in existing_coords. When there are ties, the same coordinate appears multiple times in a row in exisiting_coords and so indices_coords_in_exist_coords will be an array with multiple indices
1721
+
1722
+ for (let z=0; z < indices_coords_in_exist_coords.length; z++ ) {
1723
+ out.push({
1724
+ types: mixedelements[0]['types'][indices_coords_in_exist_coords[z]],
1725
+ x1: i,
1726
+ y1: j,
1727
+ rank1: mixedelements[0]['ranks'][indices_coords_in_exist_coords[z]],
1728
+ rank2: mixedelements[1]['ranks'][indices_coords_in_exist_coords[z]]
1729
+ });
1730
+ }
1731
+ }
1732
+ }
1733
+ }
1734
+ // group data by unique coordinates
1735
+ const agg_dat = group(out, d => `${d.x1}, ${d.y1}`);
1736
+
1737
+ return Array.from(agg_dat , ([ key, value ]) => {
1738
+ const x1 = +key.split(", ")[1]; // 2
1739
+ const y1 = +key.split(", ")[0]; // 7
1740
+ return {
1741
+ x1: x1,
1742
+ y1: y1,
1743
+ coord_on_diag: (y1+x1)/2,
1744
+ cos_dist: (x1-y1)**2,
1745
+ rank: value.map(d => d.types)[0] === "" ? "" : value.map(d => `(${d.rank1}, ${d.rank2})`)[0],
1746
+ rank_L: value.map(d => d.types)[0] === "" ? "" : extent$1(value.map(d => d.rank1)),
1747
+ rank_R: value.map(d => d.types)[0] === "" ? "" : extent$1(value.map(d => d.rank2)),
1748
+ value: value.map(d => d.types)[0] === "" ? 0 : value.length,
1749
+ types: value.map(d => d.types).join(', '),
1750
+ which_sys: x1 - y1 <= 0 ? "right" : "left"
1751
+ }
1752
+ })
1753
+ }
1754
+
1755
+
1756
+ // we expect wordshift to be of the form { divergence_elements: [ length of type ], normalization: float }
1757
+ function diamond_count(mixedelements, wordshift) {
1758
+
1759
+ let deltas = wordshift["divergence_elements"];
1760
+ let sorted_div = matlab_sort(deltas, true);
1761
+ let indices_deltas = sorted_div.orig_idx;
1762
+
1763
+ deltas = indices_deltas.map(e => deltas[e]);
1764
+
1765
+
1766
+ mixedelements[0]['types'] = indices_deltas.map(i => mixedelements[0]['types'][i]);
1767
+ mixedelements[0]['counts'] = indices_deltas.map(i => mixedelements[0]['counts'][i]);
1768
+ mixedelements[0]['ranks'] = indices_deltas.map(i => mixedelements[0]['ranks'][i]);
1769
+ mixedelements[0]['probs'] = indices_deltas.map(i => mixedelements[0]['probs'][i]);
1770
+
1771
+ mixedelements[1]['types'] = indices_deltas.map(i => mixedelements[1]['types'][i]);
1772
+ mixedelements[1]['counts'] = indices_deltas.map(i => mixedelements[1]['counts'][i]);
1773
+ mixedelements[1]['ranks'] = indices_deltas.map(i => mixedelements[1]['ranks'][i]);
1774
+ mixedelements[1]['probs'] = indices_deltas.map(i => mixedelements[1]['probs'][i]);
1775
+
1776
+ const deltas_loss = structuredClone$1(deltas);
1777
+ const deltas_gain = structuredClone$1(deltas);
1778
+
1779
+ which(mixedelements[0]['ranks'].map((d,i) => mixedelements[0]['ranks'][i] > mixedelements[1]['ranks'][i])).map(e => deltas_loss[e] = -1);
1780
+ which(mixedelements[0]['ranks'].map((d,i) => mixedelements[1]['ranks'][i] < mixedelements[1]['ranks'][i])).map(e => deltas_gain[e] = -1);
1781
+
1782
+
1783
+ const counts = diamond_counts(mixedelements);
1784
+
1785
+ return({'counts': counts, 'deltas': deltas, 'max_delta_loss': Math.max(...deltas_loss)})
1108
1786
  }
1109
1787
 
1110
- export { Dashboard, Diamond, DivergingBarChart, Legend, Test, Wordshift };
1788
+ export { Dashboard, Diamond, DivergingBarChart, Legend, Wordshift, balanceDat, combElems, diamond_count, matlab_sort, rank_maxlog10, rank_turbulence_divergence, rin, tiedrank, which, wordShift_dat, zeros };