ai-spector 0.1.8 → 0.2.1

package/README.md

@@ -4,6 +4,8 @@ Turn project notes and specs into structured documentation (SRS, basic design, d
 
 You work with **slash commands**. The AI runs the `ai-spector` CLI behind the scenes. You only use the terminal once: **`npx ai-spector init`**.
 
+Release history: [CHANGELOG.md](CHANGELOG.md).
+
 ---
 
 ## How you work (Cursor-first)
@@ -19,19 +21,19 @@ Put your source files in `docs/data-source/`, open the folder in Cursor, turn on
 
 **Graphify requires:** [uv](https://docs.astral.sh/uv/) installed; package `graphifyy` is pulled via `uv tool run` on first MCP start.
 
-### Then use slash commands
+### Slash commands
 
 | You run | What happens |
 |---------|----------------|
-| **`/analyze`** | Builds the graph skeleton, extracts knowledge (Graphify), merges use cases & features into the graph, validates |
-| **`/visualize-graph`** | Opens a browser report to inspect the graph and `knowledge.json` |
+| **`/analyze`** | Graph skeleton, Graphify extract → `knowledge.json`, merge domain nodes, validate |
 | **`/validate-graph`** | Checks the graph before generation |
-| **`/generate-srs`** | All SRS, listed files, or a short request (agent confirms scope) — graph-first, by DAG waves |
-| **`/generate-basic-design`** | All, listed files, or request (confirm) — graph + SRS context, by waves |
+| **`/generate-srs`** | SRS by DAG waves — graph-first context, `rendersTo` + `dependsOn` on output |
+| **`/generate-basic-design`** | Basic design from graph + SRS (same targeting/waves pattern) |
 | **`/generate-detail-design`** | Detail design from the graph |
-| **`/impact`** [what changed] | Shows what to regenerate after you change something (agent resolves graph seed) |
-| **`/index`** (or `ai-spector index`) | Rebuild graph, merge knowledge, parse UC/F from SRS bodies, Graphify on changed paths, doc indexes — run after `/generate-srs` |
-| **`/summary`** (optional) | Build `.ai-spector/index/*.md` doc summaries — not the same as full `/index` |
+| **`/index`** | Full refresh: registry/bootstrap, knowledge merge, **UC/F from markdown**, Graphify on changed paths, validate, doc indexes — run after **`/generate-srs`** |
+| **`/summary`** | Optional searchable summaries under `.ai-spector/index/` only (not a full graph refresh) |
+| **`/impact`** [what changed] | Regen scope from **your description**, git diff, selection, or path — agent resolves seeds (no node id required) |
+| **`/visualize-graph`** | Browser report: graph, knowledge, detail docs, sections, **`rendersTo`** to file paths |
 
 **Typical path:**
 
@@ -41,9 +43,10 @@ npx ai-spector init
 → /analyze
 → /validate-graph
 → /generate-srs
+→ /index
 ```
 
-Command details live in `.cursor/commands/` after `init` (start with `_workflow.md`).
+Command details live in `.cursor/commands/` after `init` — start with `_workflow.md`. Deeper guides: `index.md`, `summary.md`, `impact.md`, `analyze.md`.
 
 If a CLI step fails during a slash command, the agent should **stop**, show you the error, and help you fix it — not bypass the tool with manual edits. See `_cli-failures.md` in your project after `init`.
 
@@ -67,9 +70,12 @@ All structure and traceability live in one file:
 
 - Chapters and headings → **sections** in the graph  
 - Use cases, features, actors → **domain nodes** with links (`listedIn`, `satisfies`, …)  
-- Files under `docs/srs/` → **output** of the graph, not the source of truth  
+- Generated markdown under `docs/srs/`, `docs/basic-design/`, etc. → linked by **`rendersTo`** (target is the **repo-relative file path**, not a node id)  
+- Per-UC / per-feature **detail files** → extra `document` nodes, **section** nodes from headings, **`definedIn`** from domain nodes to those sections  
+
+**`/index`** (or `ai-spector index`) parses UC/F/actor ids from SRS and basic-design bodies and wires detail semantics without a full **`/analyze`**. **`/analyze`** is still required for rich Graphify MCP extract into `knowledge.json`.
 
-**Graphify** (optional MCP) only helps read `docs/data-source/` during **`/analyze`**. The graph remains canonical.
+**Graphify** (optional MCP) helps read `docs/data-source/` during **`/analyze`**. The graph remains canonical.
 
 ---
 
@@ -77,7 +83,7 @@ All structure and traceability live in one file:
 
 - Node.js 20+
 - [Cursor](https://cursor.com)
-- Graphify MCP for **`/analyze`**
+- Graphify MCP for **`/analyze`** (optional for **`/index`** with `--skip-graphify`)
 
 ---
 
@@ -92,7 +98,7 @@ npm install && npm run build
 npm run init:example
 ```
 
-Open **`example/`** as the Cursor workspace, add files under `example/docs/data-source/`, then run **`/analyze`** → **`/generate-srs`**.
+Open **`example/`** as the Cursor workspace, add files under `example/docs/data-source/`, then run **`/analyze`** → **`/generate-srs`** → **`/index`**.
 
 See [example/README.md](example/README.md).
 
@@ -102,19 +108,33 @@ See [example/README.md](example/README.md).
 
 ```text
 your-project/
-  .cursor/commands/          # /analyze, /generate-srs, …
+  .cursor/commands/          # /analyze, /index, /impact, …
   .cursor/skills/ai-spector/
   .ai-spector/
     graph/traceability.graph.json
     .docflow/analysis/knowledge.json
+    index/                     # optional summaries (/summary)
     views/graph-knowledge.html   # after /visualize-graph
   docs/
     data-source/                 # your inputs
-    srs/                         # generated
+    srs/                         # generated (+ per-UC/F detail files)
+    basic-design/
 ```
 
 ---
 
+## Troubleshooting
+
+| Symptom | What to try |
+|---------|-------------|
+| CLI error during a slash command | Read agent **Blocked** message; fix cause; re-run the **same** command — see `_cli-failures.md` |
+| Validate fails on `rendersTo` | Ensure each generated doc has `rendersTo` from its template `doc.*` node to the real file path; run **`/index`** after **`/generate-srs`** |
+| Stale UC/F or detail sections | **`/index`** (body extract + section `definedIn`); full knowledge refresh needs **`/analyze`** |
+| Unsure what to regenerate | **`/impact`** (empty = git diff), or describe the change in plain language |
+| Graphify unavailable | `ai-spector index --skip-graphify` |
+
+---
+
 ## For developers & contributors
 
 The CLI is the engine; Cursor commands wrap it.
@@ -123,13 +143,14 @@ The CLI is the engine; Cursor commands wrap it.
 |-----|--------|
 | [workflow-overview.md](docs/design/workflow-overview.md) | Graph-centric design |
 | [traceability-graph-redesign.md](docs/design/traceability-graph-redesign.md) | Schema and roadmap |
-| [testing.md](docs/testing.md) | Vitest layout, commands, mocking |
+| [testing.md](docs/testing.md) | Vitest, `tests/` layout, `npm test`, mocking |
 
-**Build from source:**
+**Tests:** [Vitest](https://vitest.dev/) — mirror `src/` under `tests/` (e.g. `tests/graph/InMemoryGraph.test.ts`). Do not colocate tests in `src/`.
 
 ```bash
 npm install && npm run build
-npm test
+npm test              # vitest run
+npm run test:watch    # during development
 npm run init:example
 ```
 
@@ -138,14 +159,14 @@ npm run init:example
 | Command | Purpose |
 |---------|---------|
 | `ai-spector init` | Scaffold project |
-| `ai-spector analyze` | Section tree in graph |
-| `ai-spector graphify update` | Graphify code graph → `.ai-spector/.../graphify-out/` (sets `GRAPHIFY_OUT`) |
+| `ai-spector analyze` | Section tree in graph (`--merge` if knowledge present) |
+| `ai-spector index` | Graph bootstrap, knowledge merge, doc semantics, Graphify, validate, doc indexes |
+| `ai-spector graphify update` | Graphify code graph → `.ai-spector/.../graphify-out/` |
 | `ai-spector graph merge --from-knowledge` | Domain nodes from staging |
-| `ai-spector graph validate` | Rules check |
-| `ai-spector graph visualize [--open]` | HTML report |
+| `ai-spector graph validate` | Schema + rules (`rendersTo` may target file paths) |
+| `ai-spector graph visualize [--open]` | HTML report (detail docs, sections, `rendersTo` edges) |
 | `ai-spector graph query <id> --json` | Context for generation |
-| `ai-spector graph impact <id> --json` | Regen scope (or `--file` / `--heading` / `--git` for current diff) |
-| `ai-spector index` | Refresh graph + knowledge merge + SRS body extract + Graphify + `.ai-spector/index/` (see flags below) |
+| `ai-spector graph impact` | Regen scope — `<id>` optional with `--file`, `--heading`, or `--git` |
 
 **`ai-spector index` flags:** `--graph-only`, `--docs-only`, `--skip-graphify`, `--skip-docs`, `--skip-merge`, `--skip-doc-semantics`, `--force-graphify`, `--skip-validate`
 

package/dist/commands/graphify-update.d.ts

@@ -8,6 +8,8 @@ export interface GraphifyUpdateOptions {
 export interface GraphifyUpdateResult {
     sourcesRun: string[];
     sourcesSkipped: string[];
+    /** Sources skipped because the directory has no files (Graphify would exit 1). */
+    sourcesEmptySkipped: string[];
     sourceHashes: Record<string, string>;
 }
 export declare function runGraphifyUpdate(opts?: GraphifyUpdateOptions): Promise<GraphifyUpdateResult>;

package/dist/commands/graphify-update.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"graphify-update.d.ts","sourceRoot":"","sources":["../../src/commands/graphify-update.ts"],"names":[],"mappings":"AAmBA,MAAM,WAAW,qBAAqB;IACpC,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,iBAAiB,CAAC,EAAE,OAAO,CAAC;IAC5B,wFAAwF;IACxF,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAED,MAAM,WAAW,oBAAoB;IACnC,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,YAAY,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;CACtC;AAgDD,wBAAsB,iBAAiB,CACrC,IAAI,GAAE,qBAA0B,GAC/B,OAAO,CAAC,oBAAoB,CAAC,CA2G/B"}
+{"version":3,"file":"graphify-update.d.ts","sourceRoot":"","sources":["../../src/commands/graphify-update.ts"],"names":[],"mappings":"AAqBA,MAAM,WAAW,qBAAqB;IACpC,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,iBAAiB,CAAC,EAAE,OAAO,CAAC;IAC5B,wFAAwF;IACxF,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAED,MAAM,WAAW,oBAAoB;IACnC,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,kFAAkF;IAClF,mBAAmB,EAAE,MAAM,EAAE,CAAC;IAC9B,YAAY,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;CACtC;AAgDD,wBAAsB,iBAAiB,CACrC,IAAI,GAAE,qBAA0B,GAC/B,OAAO,CAAC,oBAAoB,CAAC,CA4H/B"}

package/dist/commands/graphify-update.js

@@ -2,7 +2,7 @@ import { spawn } from "node:child_process";
 import { rm } from "node:fs/promises";
 import { join, resolve } from "node:path";
 import { loadDocflowConfig } from "../config/load.js";
-import { filterSourcesByHashChange, resolveGraphifySources, } from "../graphify/sources.js";
+import { filterSourcesByHashChange, isGraphifySourceEmpty, resolveGraphifyOutputPath, resolveGraphifySources, } from "../graphify/sources.js";
 import { pathExists, readJson, writeJson } from "../util/fs.js";
 function runCommand(command, args, cwd, env) {
     return new Promise((resolvePromise, reject) => {
@@ -45,7 +45,7 @@ export async function runGraphifyUpdate(opts = {}) {
     const configPath = join(projectRoot, ".ai-spector/.docflow/config/analyze.graphify.json");
     const config = await readJson(configPath);
     const g = config.graphify ?? {};
-    const outputPath = resolve(projectRoot, g.outputPath ?? ".ai-spector/.docflow/graph/graphify-out");
+    const outputPath = resolveGraphifyOutputPath(projectRoot, g.outputPath);
     const statePath = join(projectRoot, ".ai-spector/.docflow/state.json");
     const state = await readJson(statePath).catch(() => ({
         version: 1,
@@ -59,6 +59,7 @@ export async function runGraphifyUpdate(opts = {}) {
     }
     const { toRun, hashes } = await filterSourcesByHashChange(projectRoot, specs, storedHashes, opts.force === true);
     const sourcesRun = [];
+    const sourcesEmptySkipped = [];
     const sourcesSkipped = specs
         .filter((s) => !toRun.some((r) => r.key === s.key))
         .map((s) => s.path);
@@ -67,14 +68,15 @@ export async function runGraphifyUpdate(opts = {}) {
         for (const s of specs) {
             console.log(`  ○ ${s.path} (hash ${hashes[s.key] ?? "—"})`);
         }
-        return { sourcesRun, sourcesSkipped, sourceHashes: hashes };
+        return { sourcesRun, sourcesSkipped, sourcesEmptySkipped, sourceHashes: hashes };
     }
     const env = {
         ...process.env,
         GRAPHIFY_OUT: outputPath,
     };
     console.log(`Graphify update (${toRun.length} source(s), ${sourcesSkipped.length} unchanged)`);
-    console.log(`  GRAPHIFY_OUT → ${g.outputPath ?? outputPath}`);
+    console.log(`  cwd → ${projectRoot}`);
+    console.log(`  GRAPHIFY_OUT → ${outputPath}`);
     console.log("  (do not pass --graph to graphify update — use GRAPHIFY_OUT instead)");
     console.log("");
     for (const spec of toRun) {
@@ -83,6 +85,11 @@ export async function runGraphifyUpdate(opts = {}) {
             console.log(`  ⊘ skip ${spec.path} (not found)`);
             continue;
         }
+        if (await isGraphifySourceEmpty(projectRoot, spec.path)) {
+            console.log(`  ⊘ skip ${spec.path} (empty)`);
+            sourcesEmptySkipped.push(spec.path);
+            continue;
+        }
         console.log(`  ▶ ${spec.path} (hash ${hashes[spec.key] ?? "—"})`);
         const result = await runGraphifyCli(["update", spec.path], projectRoot, env);
         if (result.stdout.trim()) {
@@ -103,11 +110,20 @@ export async function runGraphifyUpdate(opts = {}) {
         throw new Error(`Expected graph.json at ${g.graphJsonPath ?? graphJson} after update — check Graphify install (graphify or uv + graphifyy)`);
     }
     const primaryRel = g.defaultDataSource ?? "docs/data-source";
-    const staleOut = join(resolve(projectRoot, primaryRel), "graphify-out");
-    if (opts.removeStaleOutput !== false && (await pathExists(staleOut))) {
-        await rm(staleOut, { recursive: true, force: true });
-        console.log("");
-        console.log(`Removed stale ${primaryRel}/graphify-out/ (wrong default location)`);
+    const primaryAbs = resolve(projectRoot, primaryRel);
+    const staleDirs = [
+        join(primaryAbs, "graphify-out"),
+        join(primaryAbs, ".ai-spector", ".docflow", "graph", "graphify-out"),
+    ];
+    for (const staleOut of staleDirs) {
+        if (opts.removeStaleOutput !== false && (await pathExists(staleOut))) {
+            await rm(staleOut, { recursive: true, force: true });
+            const rel = staleOut.startsWith(projectRoot)
+                ? staleOut.slice(projectRoot.length + 1)
+                : staleOut;
+            console.log("");
+            console.log(`Removed stale ${rel}/ (GRAPHIFY_OUT was relative to source path)`);
+        }
     }
     graphifyState.lastRunAt = new Date().toISOString();
     graphifyState.sourceHashes = hashes;
@@ -116,9 +132,12 @@ export async function runGraphifyUpdate(opts = {}) {
     await writeJson(statePath, state);
     console.log("");
     console.log(`OK — ${g.graphJsonPath ?? ".ai-spector/.docflow/graph/graphify-out/graph.json"}`);
+    if (sourcesEmptySkipped.length > 0) {
+        console.log(`Skipped (empty): ${sourcesEmptySkipped.join(", ")}`);
+    }
     if (sourcesSkipped.length > 0) {
         console.log(`Skipped (unchanged): ${sourcesSkipped.join(", ")}`);
     }
-    return { sourcesRun, sourcesSkipped, sourceHashes: hashes };
+    return { sourcesRun, sourcesSkipped, sourcesEmptySkipped, sourceHashes: hashes };
 }
 //# sourceMappingURL=graphify-update.js.map

package/dist/commands/graphify-update.js.map

@@ -1 +1 @@
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package/dist/commands/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/commands/index.ts"],"names":[],"mappings":"AAgCA,MAAM,MAAM,eAAe,GAAG,IAAI,GAAG,SAAS,GAAG,QAAQ,CAAC;AAE1D,MAAM,WAAW,eAAe;IAC9B,EAAE,EAAE,MAAM,CAAC;IACX,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,eAAe,CAAC;IACxB,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,gBAAgB,CAAC,EAAE,OAAO,CAAC;IAC3B,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB,sEAAsE;IACtE,aAAa,CAAC,EAAE,OAAO,CAAC;CACzB;AAED,MAAM,WAAW,WAAW;IAC1B,KAAK,EAAE,eAAe,EAAE,CAAC;IACzB,MAAM,EAAE,OAAO,CAAC;CACjB;AAED,wBAAsB,QAAQ,CAC5B,IAAI,GAAE,YAAiB,GACtB,OAAO,CAAC,WAAW,CAAC,CAkVtB"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/commands/index.ts"],"names":[],"mappings":"AAgCA,MAAM,MAAM,eAAe,GAAG,IAAI,GAAG,SAAS,GAAG,QAAQ,CAAC;AAE1D,MAAM,WAAW,eAAe;IAC9B,EAAE,EAAE,MAAM,CAAC;IACX,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,eAAe,CAAC;IACxB,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,gBAAgB,CAAC,EAAE,OAAO,CAAC;IAC3B,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB,sEAAsE;IACtE,aAAa,CAAC,EAAE,OAAO,CAAC;CACzB;AAED,MAAM,WAAW,WAAW;IAC1B,KAAK,EAAE,eAAe,EAAE,CAAC;IACzB,MAAM,EAAE,OAAO,CAAC;CACjB;AAED,wBAAsB,QAAQ,CAC5B,IAAI,GAAE,YAAiB,GACtB,OAAO,CAAC,WAAW,CAAC,CAsVtB"}

package/dist/commands/index.js

@@ -183,6 +183,9 @@ export async function runIndex(opts = {}) {
                 const runDetail = gf.sourcesRun.length > 0
                     ? `updated: ${gf.sourcesRun.join(", ")}`
                     : "no source changes";
+                const emptyDetail = gf.sourcesEmptySkipped.length > 0
+                    ? `; empty (skipped): ${gf.sourcesEmptySkipped.join(", ")}`
+                    : "";
                 const skipDetail = gf.sourcesSkipped.length > 0
                     ? `; unchanged: ${gf.sourcesSkipped.join(", ")}`
                     : "";
@@ -190,7 +193,7 @@ export async function runIndex(opts = {}) {
                     id: "graphify-storage",
                     label: "Graphify index & graph.json",
                     status: "ok",
-                    detail: `${runDetail}${skipDetail}`,
+                    detail: `${runDetail}${emptyDetail}${skipDetail}`,
                 });
             }
             catch (err) {

package/dist/commands/index.js.map

@@ -1 +1 @@
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package/dist/graph/InMemoryGraph.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"InMemoryGraph.d.ts","sourceRoot":"","sources":["../../src/graph/InMemoryGraph.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,SAAS,EAAE,iBAAiB,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAE5F,qBAAa,aAAa;IACxB,QAAQ,CAAC,SAAS,yBAAgC;IAClD,QAAQ,CAAC,QAAQ,2BAAkC;IACnD,QAAQ,CAAC,OAAO,2BAAkC;IAElD,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,iBAAiB,GAAG,aAAa;IAiBnD,MAAM,IAAI,iBAAiB;IAQ3B,uEAAuE;IACvE,mBAAmB,IAAI,iBAAiB;IAmBxC,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,IAAI;IAS9B,6EAA6E;IAC7E,UAAU,CAAC,IAAI,EAAE,SAAS,GAAG,SAAS,GAAG,SAAS;IAelD,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,MAAM;IAIhC,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,OAAO;IAYjC,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,IAAI;IAU9B,eAAe,CAAC,IAAI,EAAE,SAAS,GAAG,OAAO;IAezC,SAAS,CACP,EAAE,EAAE,MAAM,EACV,SAAS,EAAE,KAAK,GAAG,IAAI,GAAG,MAAM,EAChC,SAAS,CAAC,EAAE,GAAG,CAAC,MAAM,CAAC,EACvB,KAAK,SAAI,GACR,GAAG,CAAC,MAAM,CAAC;IAsCd,iBAAiB,IAAI,eAAe,EAAE;CA+DvC"}
+{"version":3,"file":"InMemoryGraph.d.ts","sourceRoot":"","sources":["../../src/graph/InMemoryGraph.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,SAAS,EAAE,iBAAiB,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAE5F,qBAAa,aAAa;IACxB,QAAQ,CAAC,SAAS,yBAAgC;IAClD,QAAQ,CAAC,QAAQ,2BAAkC;IACnD,QAAQ,CAAC,OAAO,2BAAkC;IAElD,MAAM,CAAC,IAAI,CAAC,IAAI,EAAE,iBAAiB,GAAG,aAAa;IAiBnD,MAAM,IAAI,iBAAiB;IAQ3B,uEAAuE;IACvE,mBAAmB,IAAI,iBAAiB;IAmBxC,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,IAAI;IAS9B,6EAA6E;IAC7E,UAAU,CAAC,IAAI,EAAE,SAAS,GAAG,SAAS,GAAG,SAAS;IAelD,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,MAAM;IAIhC,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,OAAO;IAYjC,OAAO,CAAC,IAAI,EAAE,SAAS,GAAG,IAAI;IAU9B,eAAe,CAAC,IAAI,EAAE,SAAS,GAAG,OAAO;IAezC,SAAS,CACP,EAAE,EAAE,MAAM,EACV,SAAS,EAAE,KAAK,GAAG,IAAI,GAAG,MAAM,EAChC,SAAS,CAAC,EAAE,GAAG,CAAC,MAAM,CAAC,EACvB,KAAK,SAAI,GACR,GAAG,CAAC,MAAM,CAAC;IAsCd,iBAAiB,IAAI,eAAe,EAAE;CAsEvC"}

package/dist/graph/InMemoryGraph.js

@@ -176,6 +176,12 @@ export class InMemoryGraph {
         }
         for (const node of this.nodesById.values()) {
             if (node.type === "document") {
+                const isPerDomainInstance = typeof node.output === "string" &&
+                    !node.outputPattern &&
+                    (node.perDomain === "useCase" || node.perDomain === "feature");
+                if (isPerDomainInstance) {
+                    continue;
+                }
                 const hasSection = [...this.outEdges.get(node.id) ?? []].some((e) => e.type === "contains" &&
                     this.nodesById.get(e.to)?.type === "section");
                 if (!hasSection) {

package/dist/graph/InMemoryGraph.js.map

@@ -1 +1 @@
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+{"version":3,"file":"InMemoryGraph.js","sourceRoot":"","sources":["../../src/graph/InMemoryGraph.ts"],"names":[],"mappings":"AAEA,MAAM,OAAO,aAAa;IACf,SAAS,GAAG,IAAI,GAAG,EAAqB,CAAC;IACzC,QAAQ,GAAG,IAAI,GAAG,EAAuB,CAAC;IAC1C,OAAO,GAAG,IAAI,GAAG,EAAuB,CAAC;IAElD,MAAM,CAAC,IAAI,CAAC,IAAuB;QACjC,MAAM,CAAC,GAAG,IAAI,aAAa,EAAE,CAAC;QAC9B,KAAK,MAAM,IAAI,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;YAC9B,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QAClB,CAAC;QACD,KAAK,MAAM,IAAI,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;YAC9B,IAAI,CAAC,CAAC,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;gBAChC,MAAM,IAAI,KAAK,CAAC,iCAAiC,IAAI,CAAC,IAAI,OAAO,IAAI,CAAC,EAAE,EAAE,CAAC,CAAC;YAC9E,CAAC;YACD,IAAI,IAAI,CAAC,IAAI,KAAK,WAAW,IAAI,CAAC,CAAC,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;gBAC3D,MAAM,IAAI,KAAK,CAAC,iCAAiC,IAAI,CAAC,IAAI,OAAO,IAAI,CAAC,EAAE,EAAE,CAAC,CAAC;YAC9E,CAAC;YACD,CAAC,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QAClB,CAAC;QACD,OAAO,CAAC,CAAC;IACX,CAAC;IAED,MAAM;QACJ,OAAO;YACL,OAAO,EAAE,CAAC;YACV,KAAK,EAAE,CAAC,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,CAAC;YACnC,KAAK,EAAE,CAAC,GAAG,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,EAAE,GAAG,IAAI,CAAC,OAAO,CAAC,MAAM,EAAE,CAAC,CAAC,IAAI,EAAE;SACpE,CAAC;IACJ,CAAC;IAED,uEAAuE;IACvE,mBAAmB;QACjB,MAAM,OAAO,GAAG,IAAI,GAAG,EAAU,CAAC;QAClC,MAAM,KAAK,GAAgB,EAAE,CAAC;QAC9B,KAAK,MAAM,IAAI,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,EAAE,CAAC;YAC1C,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE,CAAC;gBACrB,MAAM,GAAG,GAAG,GAAG,CAAC,CAAC,IAAI,IAAI,CAAC,CAAC,IAAI,IAAI,CAAC,CAAC,EAAE,IAAI,CAAC,CAAC,IAAI,IAAI,EAAE,EAAE,CAAC;gBAC1D,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC;oBACtB,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;oBACjB,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;gBAChB,CAAC;YACH,CAAC;QACH,CAAC;QACD,OAAO;YACL,OAAO,EAAE,CAAC;YACV,KAAK,EAAE,CAAC,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,CAAC;YACnC,KAAK;SACN,CAAC;IACJ,CAAC;IAED,OAAO,CAAC,IAAe;QACrB,IAAI,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;YAChC,MAAM,IAAI,KAAK,CAAC,sBAAsB,IAAI,CAAC,EAAE,EAAE,CAAC,CAAC;QACnD,CAAC;QACD,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE,IAAI,CAAC,CAAC;QAClC,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC;QAC/B,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC;IAChC,CAAC;IAED,6EAA6E;IAC7E,UAAU,CAAC,IAAe;QACxB,MAAM,QAAQ,GAAG,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAC7C,IAAI,QAAQ,EAAE,CAAC;YACb,IAAI,QAAQ,CAAC,IAAI,KAAK,IAAI,CAAC,IAAI,EAAE,CAAC;gBAChC,MAAM,IAAI,KAAK,CACb,+BAA+B,IAAI,CAAC,EAAE,KAAK,QAAQ,CAAC,IAAI,MAAM,IAAI,CAAC,IAAI,EAAE,CAC1E,CAAC;YACJ,CAAC;YACD,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,GAAG,QAAQ,EAAE,GAAG,IAAI,EAAE,CAAC,CAAC;YACtD,OAAO,SAAS,CAAC;QACnB,CAAC;QACD,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QACnB,OAAO,SAAS,CAAC;IACnB,CAAC;IAED,OAAO,CAAC,IAAe;QACrB,OAAO,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE,IAAI,IAAI,CAAC,IAAI,IAAI,EAAE,EAAE,CAAC;IACnE,CAAC;IAED,OAAO,CAAC,IAAe;QACrB,MAAM,GAAG,GAAG,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QAC/B,KAAK,MAAM,IAAI,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,EAAE,CAAC;YAC1C,KAAK,MAAM,CAAC,IAAI,IAAI,EAAE,CAAC;gBACrB,IAAI,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE,CAAC;oBAC5B,OAAO,IAAI,CAAC;gBACd,CAAC;YACH,CAAC;QACH,CAAC;QACD,OAAO,KAAK,CAAC;IACf,CAAC;IAED,OAAO,CAAC,IAAe;QACrB,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,CAAE,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QACzC,MAAM,OAAO,GAAG,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAC1C,IAAI,OAAO,EAAE,CAAC;YACZ,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QACrB,CAAC;aAAM,IAAI,IAAI,CAAC,IAAI,KAAK,WAAW,EAAE,CAAC;YACrC,MAAM,IAAI,KAAK,CAAC,wCAAwC,IAAI,CAAC,IAAI,OAAO,IAAI,CAAC,EAAE,EAAE,CAAC,CAAC;QACrF,CAAC;IACH,CAAC;IAED,eAAe,CAAC,IAAe;QAC7B,IAAI,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC;YACvB,OAAO,KAAK,CAAC;QACf,CAAC;QACD,IAAI,CAAC,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;YACnC,MAAM,IAAI,KAAK,CAAC,wCAAwC,IAAI,CAAC,IAAI,EAAE,CAAC,CAAC;QACvE,CAAC;QACD,yDAAyD;QACzD,IAAI,IAAI,CAAC,IAAI,KAAK,WAAW,IAAI,CAAC,IAAI,CAAC,SAAS,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC;YAC9D,MAAM,IAAI,KAAK,CAAC,wCAAwC,IAAI,CAAC,IAAI,OAAO,IAAI,CAAC,EAAE,EAAE,CAAC,CAAC;QACrF,CAAC;QACD,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QACnB,OAAO,IAAI,CAAC;IACd,CAAC;IAED,SAAS,CACP,EAAU,EACV,SAAgC,EAChC,SAAuB,EACvB,KAAK,GAAG,CAAC;QAET,MAAM,IAAI,GAAG,IAAI,GAAG,EAAU,CAAC;QAC/B,MAAM,KAAK,GAAgC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;QAC1D,OAAO,KAAK,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YACxB,MAAM,EAAE,EAAE,EAAE,OAAO,EAAE,CAAC,EAAE,GAAG,KAAK,CAAC,KAAK,EAAG,CAAC;YAC1C,IAAI,CAAC,GAAG,KAAK,EAAE,CAAC;gBACd,SAAS;YACX,CAAC;YACD,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC;gBACV,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;YACpB,CAAC;YACD,IAAI,CAAC,KAAK,KAAK,EAAE,CAAC;gBAChB,SAAS;YACX,CAAC;YACD,MAAM,MAAM,GAAG,CAAC,IAAY,EAAE,EAAE;gBAC9B,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,IAAI,KAAK,EAAE,EAAE,CAAC;oBACnC,KAAK,CAAC,IAAI,CAAC,EAAE,EAAE,EAAE,IAAI,EAAE,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;gBACrC,CAAC;YACH,CAAC,CAAC;YACF,IAAI,SAAS,KAAK,KAAK,IAAI,SAAS,KAAK,MAAM,EAAE,CAAC;gBAChD,KAAK,MAAM,CAAC,IAAI,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,CAAC,IAAI,EAAE,EAAE,CAAC;oBACjD,IAAI,CAAC,SAAS,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package/dist/graph/detail-sections.d.ts

@@ -0,0 +1,14 @@
+import type { GraphNode } from "../types.js";
+import type { ExtractPatch } from "./knowledge.js";
+export interface ParsedDetailSection {
+    id: string;
+    heading: string;
+    level: number;
+    order: number;
+}
+/** Per-domain detail markdown instance (not a template document from bootstrap). */
+export declare function isPerDomainInstanceDocument(node: GraphNode): boolean;
+/** Parse `###` headings and optional `<!-- section:sec.... -->` anchors from detail markdown. */
+export declare function parseDetailSections(content: string, documentId: string): ParsedDetailSection[];
+export declare function detailSectionsToPatch(documentId: string, sections: ParsedDetailSection[]): ExtractPatch;
+//# sourceMappingURL=detail-sections.d.ts.map

package/dist/graph/detail-sections.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"detail-sections.d.ts","sourceRoot":"","sources":["../../src/graph/detail-sections.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAa,SAAS,EAAE,MAAM,aAAa,CAAC;AAExD,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AAKnD,MAAM,WAAW,mBAAmB;IAClC,EAAE,EAAE,MAAM,CAAC;IACX,OAAO,EAAE,MAAM,CAAC;IAChB,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;CACf;AAED,oFAAoF;AACpF,wBAAgB,2BAA2B,CAAC,IAAI,EAAE,SAAS,GAAG,OAAO,CAOpE;AAkBD,iGAAiG;AACjG,wBAAgB,mBAAmB,CACjC,OAAO,EAAE,MAAM,EACf,UAAU,EAAE,MAAM,GACjB,mBAAmB,EAAE,CA8BvB;AAED,wBAAgB,qBAAqB,CACnC,UAAU,EAAE,MAAM,EAClB,QAAQ,EAAE,mBAAmB,EAAE,GAC9B,YAAY,CA0Bd"}

package/dist/graph/detail-sections.js

@@ -0,0 +1,77 @@
+import { sectionIdFromHeading } from "../registry/slug.js";
+const HEADING_RE = /^(#{2,4})\s+(.+)$/;
+const SECTION_ANCHOR_RE = /<!--\s*section:\s*([^\s>]+)\s*-->/;
+/** Per-domain detail markdown instance (not a template document from bootstrap). */
+export function isPerDomainInstanceDocument(node) {
+    return (node.type === "document" &&
+        typeof node.output === "string" &&
+        !node.outputPattern &&
+        (node.perDomain === "useCase" || node.perDomain === "feature"));
+}
+function resolveParentSectionId(sections, index) {
+    const current = sections[index];
+    if (current.level <= 2) {
+        return null;
+    }
+    for (let i = index - 1; i >= 0; i--) {
+        if (sections[i].level === current.level - 1) {
+            return sections[i].id;
+        }
+    }
+    return null;
+}
+/** Parse `###` headings and optional `<!-- section:sec.... -->` anchors from detail markdown. */
+export function parseDetailSections(content, documentId) {
+    const lines = content.split(/\r?\n/);
+    const sections = [];
+    let order = 0;
+    let pendingAnchor;
+    for (const line of lines) {
+        const trimmed = line.trim();
+        const anchorMatch = SECTION_ANCHOR_RE.exec(trimmed);
+        if (anchorMatch) {
+            pendingAnchor = anchorMatch[1].trim();
+            continue;
+        }
+        if (line.startsWith(">")) {
+            continue;
+        }
+        const m = HEADING_RE.exec(trimmed);
+        if (!m) {
+            continue;
+        }
+        const level = m[1].length;
+        const heading = m[2].trim();
+        order += 1;
+        const id = pendingAnchor ?? sectionIdFromHeading(documentId, heading, level, order);
+        pendingAnchor = undefined;
+        sections.push({ id, heading, level, order });
+    }
+    return sections;
+}
+export function detailSectionsToPatch(documentId, sections) {
+    const nodes = sections.map((sec) => ({
+        id: sec.id,
+        type: "section",
+        documentId,
+        heading: sec.heading,
+        level: sec.level,
+        order: sec.order,
+    }));
+    const edges = [];
+    for (let i = 0; i < sections.length; i++) {
+        const sec = sections[i];
+        const parentSectionId = resolveParentSectionId(sections, i);
+        const parentId = parentSectionId ?? documentId;
+        edges.push({ type: "partOf", from: sec.id, to: parentId });
+        edges.push({ type: "contains", from: parentId, to: sec.id });
+        if (i > 0) {
+            const prev = sections[i - 1];
+            if (prev.level === sec.level) {
+                edges.push({ type: "follows", from: prev.id, to: sec.id });
+            }
+        }
+    }
+    return { version: 1, nodes, edges };
+}
+//# sourceMappingURL=detail-sections.js.map

package/dist/graph/detail-sections.js.map

@@ -0,0 +1 @@
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package/dist/graph/doc-extract.d.ts

@@ -7,10 +7,21 @@ export interface DocExtractResult {
     useCases: number;
     features: number;
     actors: number;
+    detailDocuments: number;
+    detailSections: number;
     filesScanned: number;
 }
+/** Registry template ids for per-domain SRS detail (see documents.json). */
+export declare const PER_DOMAIN_TEMPLATE_DOC: {
+    readonly useCase: "doc.srs.uc-detail";
+    readonly feature: "doc.srs.feature-detail";
+};
 /** Normalize UC-1 → UC-01, F-2 → F-02; leaves placeholders (UC-XX) unchanged */
 export declare function normalizeDomainId(raw: string): string;
+export type DetailFileKind = "useCaseDetail" | "featureDetail";
+/** Classify markdown under docs/srs as list chapter vs per-domain detail file. */
+export declare function classifySrsDetailFile(relativePath: string): DetailFileKind | null;
+export declare function documentIdForDomainDetail(kind: DetailFileKind, domainId: string): string;
 interface ParsedDomain {
     useCases: Map<string, {
         title?: string;
@@ -28,6 +39,8 @@ interface ParsedDomain {
 }
 export declare function extractDomainFromMarkdown(content: string, relativePath: string): ParsedDomain;
 export declare function parsedDomainToPatch(parsed: ParsedDomain, relativePath: string): ExtractPatch;
+/** Document nodes + definedIn/rendersTo for per-UC / per-feature markdown on disk. */
+export declare function detailFileToPatch(relativePath: string, content: string): ExtractPatch;
 export declare function mergeParsedDomains(domains: ParsedDomain[]): ParsedDomain;
 export declare function buildDocExtractPatch(entries: DocExtractEntry[]): {
     patch: ExtractPatch;

package/dist/graph/doc-extract.d.ts.map

@@ -1 +1 @@
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