ai-factory 2.5.0 → 2.7.0

package/README.md

@@ -84,21 +84,22 @@ npx ai-factory init
 ### Upgrading from v1 to v2
 
 ```bash
-# 1) Update the CLI package
-npm install -g ai-factory@latest
-
-# 2) Migrate existing skills to v2 naming
 ai-factory upgrade
 ```
 
 `ai-factory upgrade` removes old bare-named skills (`commit`, `feature`, etc.) and installs new `aif-*` prefixed versions. Custom skills are preserved.
 
+> **Note:** `ai-factory update` automatically checks npm for a newer CLI version and offers to install it before updating skills, then reports `changed/unchanged/skipped/removed` for installed base skills. Use `ai-factory update --force` for a clean reinstall of currently installed base skills.
+
 ### Example Workflow
 
 ```bash
 # Explore options and requirements before planning (optional)
 /aif-explore Add user authentication with OAuth
 
+# Need a strictly verified answer before changing anything?
+/aif-grounded Does this repo already support OAuth providers?
+
 # Plan a feature — creates branch, analyzes codebase, builds step-by-step plan
 /aif-plan Add user authentication with OAuth
 
@@ -141,9 +142,9 @@ AI Factory can generate and maintain your project docs with a single command:
 | Guide | Description |
 |-------|-------------|
 | [Getting Started](docs/getting-started.md) | What is AI Factory, supported agents, CLI commands |
-| [Development Workflow](docs/workflow.md) | Workflow diagram, when to use what, spec-driven approach |
+| [Development Workflow](docs/workflow.md) | Workflow diagram, when to use `explore` vs `grounded`, spec-driven approach |
 | [Reflex Loop](docs/loop.md) | Iterative generate → evaluate → critique → refine workflow |
-| [Core Skills](docs/skills.md) | All slash commands — explore, plan, fix, implement, evolve, docs, and more |
+| [Core Skills](docs/skills.md) | All slash commands — explore, grounded, plan, fix, implement, evolve, docs, and more |
 | [Skill Evolution](docs/evolve.md) | How /aif-fix patches feed into /aif-evolve to generate smarter skill rules |
 | [Plan Files](docs/plan-files.md) | Plan files, self-improvement patches, skill acquisition |
 | [Security](docs/security.md) | Two-level security scanning for external skills |

package/dist/cli/commands/init.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/init.ts"],"names":[],"mappings":"AAiBA,wBAAsB,WAAW,IAAI,OAAO,CAAC,IAAI,CAAC,CAkJjD"}

package/dist/cli/commands/init.js

@@ -1,13 +1,14 @@
 import chalk from 'chalk';
 import path from 'path';
 import { runWizard } from '../wizard/prompts.js';
-import { installSkills } from '../../core/installer.js';
+import { buildManagedSkillsState, installSkills } from '../../core/installer.js';
 import { saveConfig, configExists, loadConfig, getCurrentVersion } from '../../core/config.js';
 import { configureMcp, getMcpInstructions } from '../../core/mcp.js';
 import { getAgentConfig } from '../../core/agents.js';
 import { cleanupAgentSetup, getAgentOnboarding } from '../../core/transformer.js';
 import { removeDirectory } from '../../utils/fs.js';
 import { applyExtensionInjections } from '../../core/injections.js';
+import { collectReplacedSkills } from '../../core/extension-ops.js';
 async function removeAgentSetup(projectDir, agent) {
     await removeDirectory(path.join(projectDir, agent.skillsDir));
     await cleanupAgentSetup(agent.id, projectDir, agent.skillsDir);
@@ -68,11 +69,6 @@ export async function initCommand() {
             });
         }
         const existingExtensions = existingConfig?.extensions ?? [];
-        await saveConfig(projectDir, {
-            version: getCurrentVersion(),
-            agents: installedAgents,
-            extensions: existingExtensions,
-        });
         // Re-apply extension injections after skill installation
         if (existingExtensions.length > 0) {
             let totalInjections = 0;
@@ -83,6 +79,16 @@ export async function initCommand() {
                 console.log(chalk.green(`✓ Re-applied ${totalInjections} extension injection(s)`));
             }
         }
+        const replacedSkills = collectReplacedSkills(existingExtensions);
+        for (const agent of installedAgents) {
+            const managedBaseSkills = agent.installedSkills.filter(skill => !replacedSkills.has(skill));
+            agent.managedSkills = await buildManagedSkillsState(projectDir, agent, managedBaseSkills);
+        }
+        await saveConfig(projectDir, {
+            version: getCurrentVersion(),
+            agents: installedAgents,
+            extensions: existingExtensions,
+        });
         console.log(chalk.green('✓ Configuration saved to .ai-factory.json'));
         console.log(chalk.bold.green('\n✅ Setup complete!\n'));
         for (const agent of installedAgents) {

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package/dist/cli/commands/update.d.ts

@@ -1,2 +1,6 @@
-export declare function updateCommand(): Promise<void>;
+interface UpdateCommandOptions {
+    force?: boolean;
+}
+export declare function updateCommand(options?: UpdateCommandOptions): Promise<void>;
+export {};
 //# sourceMappingURL=update.d.ts.map

package/dist/cli/commands/update.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"update.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/update.ts"],"names":[],"mappings":"AAYA,wBAAsB,aAAa,IAAI,OAAO,CAAC,IAAI,CAAC,CA0JnD"}
+{"version":3,"file":"update.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/update.ts"],"names":[],"mappings":"AAgBA,UAAU,oBAAoB;IAC5B,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AA2ID,wBAAsB,aAAa,CAAC,OAAO,GAAE,oBAAyB,GAAG,OAAO,CAAC,IAAI,CAAC,CA6MrF"}

package/dist/cli/commands/update.js

@@ -1,12 +1,154 @@
 import chalk from 'chalk';
 import path from 'path';
+import { realpathSync } from 'fs';
+import { execSync } from 'child_process';
+import inquirer from 'inquirer';
 import { getCurrentVersion, loadConfig, saveConfig } from '../../core/config.js';
-import { getAvailableSkills, partitionSkills, updateSkills } from '../../core/installer.js';
+import { buildManagedSkillsState, getAvailableSkills, partitionSkills, updateSkills } from '../../core/installer.js';
 import { applyExtensionInjections } from '../../core/injections.js';
 import { getExtensionsDir, loadExtensionManifest } from '../../core/extensions.js';
 import { installExtensionSkillsForAllAgents, installSkillsForAllAgents, collectReplacedSkills, } from '../../core/extension-ops.js';
-export async function updateCommand() {
+import { fileExists } from '../../utils/fs.js';
+function formatReason(reason) {
+    switch (reason) {
+        case 'source-hash-changed':
+            return 'source changed';
+        case 'installed-hash-drift':
+            return 'local drift';
+        case 'missing-managed-state':
+            return 'state missing';
+        case 'missing-installed-artifact':
+            return 'artifact missing';
+        case 'package-removed':
+            return 'removed from package';
+        case 'new-skill-not-installed':
+            return 'new in package';
+        case 'replaced-by-extension':
+            return 'replaced by extension';
+        case 'force-clean-reinstall':
+            return 'force reinstall';
+        case 'install-failed':
+            return 'install failed';
+        case 'source-missing':
+            return 'source unavailable';
+        default:
+            return reason;
+    }
+}
+function groupEntriesByStatus(entries) {
+    return {
+        changed: entries.filter(entry => entry.status === 'changed').sort((a, b) => a.skill.localeCompare(b.skill)),
+        unchanged: entries.filter(entry => entry.status === 'unchanged').sort((a, b) => a.skill.localeCompare(b.skill)),
+        skipped: entries.filter(entry => entry.status === 'skipped').sort((a, b) => a.skill.localeCompare(b.skill)),
+        removed: entries.filter(entry => entry.status === 'removed').sort((a, b) => a.skill.localeCompare(b.skill)),
+    };
+}
+function parseVersion(v) {
+    const [core, ...rest] = v.split('-');
+    return {
+        parts: core.split('.').map(Number),
+        prerelease: rest.length > 0 ? rest.join('-') : null,
+    };
+}
+function isNewerVersion(latest, current) {
+    const l = parseVersion(latest);
+    const c = parseVersion(current);
+    for (let i = 0; i < 3; i++) {
+        if ((l.parts[i] ?? 0) > (c.parts[i] ?? 0))
+            return true;
+        if ((l.parts[i] ?? 0) < (c.parts[i] ?? 0))
+            return false;
+    }
+    // Equal major.minor.patch: prerelease is older than stable (semver §11)
+    if (c.prerelease && !l.prerelease)
+        return true;
+    if (!c.prerelease && l.prerelease)
+        return false;
+    return false;
+}
+async function getLatestVersion() {
+    try {
+        const response = await fetch('https://registry.npmjs.org/ai-factory/latest', {
+            signal: AbortSignal.timeout(5000),
+        });
+        if (!response.ok)
+            return null;
+        const data = await response.json();
+        if (!/^\d+\.\d+\.\d+(-[\w.]+)?$/.test(data.version))
+            return null;
+        return data.version;
+    }
+    catch {
+        return null;
+    }
+}
+function getInstallCommand(version) {
+    try {
+        const whichCmd = process.platform === 'win32' ? 'where' : 'which';
+        const binPath = execSync(`${whichCmd} ai-factory`, {
+            encoding: 'utf-8',
+            timeout: 5000,
+            stdio: ['pipe', 'pipe', 'pipe'],
+        }).split('\n')[0].trim();
+        const realPath = realpathSync(binPath).replaceAll('\\', '/');
+        if (realPath.includes('.bun/'))
+            return `bun add -g ai-factory@${version}`;
+        if (realPath.includes('/mise/'))
+            return `mise use -g npm:ai-factory@${version}`;
+        if (realPath.includes('/volta/'))
+            return `volta install ai-factory@${version}`;
+        if (realPath.includes('/pnpm/'))
+            return `pnpm add -g ai-factory@${version}`;
+        if (realPath.includes('/yarn/'))
+            return `yarn global add ai-factory@${version}`;
+    }
+    catch {
+        // Binary not found or symlink resolution failed, default to npm
+    }
+    return `npm install -g ai-factory@${version}`;
+}
+async function selfUpdate(currentVersion) {
+    const latestVersion = await getLatestVersion();
+    if (!latestVersion) {
+        console.log(chalk.dim('Could not check for new versions\n'));
+        return false;
+    }
+    if (!isNewerVersion(latestVersion, currentVersion)) {
+        console.log(chalk.dim('ai-factory is up to date\n'));
+        return false;
+    }
+    console.log(chalk.cyan(`📦 New version available: ${currentVersion} → ${latestVersion}`));
+    if (!process.stdin.isTTY) {
+        console.log(chalk.dim('Non-interactive mode — skipping self-update\n'));
+        return false;
+    }
+    const { shouldUpdate } = await inquirer.prompt([{
+            type: 'confirm',
+            name: 'shouldUpdate',
+            message: `Update ai-factory to ${latestVersion}?`,
+            default: true,
+        }]);
+    if (!shouldUpdate) {
+        console.log(chalk.dim('Skipping package update\n'));
+        return false;
+    }
+    try {
+        const installCmd = getInstallCommand(latestVersion);
+        console.log(chalk.dim(`\n$ ${installCmd}`));
+        execSync(installCmd, { stdio: 'inherit' });
+        console.log(chalk.green(`\n✓ Updated to ${latestVersion}`));
+        console.log(chalk.cyan('Please re-run `ai-factory update` to update skills with the new version.\n'));
+        process.exitCode = 75; // EX_TEMPFAIL — signals caller to re-run
+        return true;
+    }
+    catch (error) {
+        console.log(chalk.yellow(`⚠ Self-update failed: ${error.message}`));
+        return false;
+    }
+}
+export async function updateCommand(options = {}) {
     const projectDir = process.cwd();
+    const force = Boolean(options.force);
     console.log(chalk.bold.blue('\n🏭 AI Factory - Update Skills\n'));
     const config = await loadConfig(projectDir);
     if (!config) {
@@ -17,33 +159,28 @@ export async function updateCommand() {
     const currentVersion = getCurrentVersion();
     console.log(chalk.dim(`Config version: ${config.version}`));
     console.log(chalk.dim(`Package version: ${currentVersion}\n`));
+    const selfUpdated = await selfUpdate(currentVersion);
+    if (selfUpdated)
+        return;
+    if (force) {
+        console.log(chalk.yellow('⚠ Force mode enabled: clean reinstall of installed base skills\n'));
+    }
     console.log(chalk.dim('Updating skills...\n'));
     try {
         const availableSkills = await getAvailableSkills();
-        const previousBaseSkillsByAgent = new Map();
-        for (const agent of config.agents) {
-            const { base: previousBaseSkills } = partitionSkills(agent.installedSkills);
-            previousBaseSkillsByAgent.set(agent.id, previousBaseSkills);
-            const newSkills = availableSkills.filter(s => !previousBaseSkills.includes(s));
-            const removedSkills = previousBaseSkills.filter(s => !availableSkills.includes(s));
-            if (newSkills.length > 0) {
-                console.log(chalk.cyan(`📦 [${agent.id}] New skills available: ${newSkills.join(', ')}`));
-            }
-            if (removedSkills.length > 0) {
-                console.log(chalk.yellow(`🗑️  [${agent.id}] Removed skills: ${removedSkills.join(', ')}`));
-            }
-        }
-        if (config.agents.length > 0) {
-            console.log('');
-        }
-        // Collect all replaced skills from extensions
+        const entriesByAgent = new Map();
         const extensions = config.extensions ?? [];
         const allReplacedSkills = collectReplacedSkills(extensions);
         if (allReplacedSkills.size > 0) {
             console.log(chalk.dim(`Skipping replaced skills: ${[...allReplacedSkills].join(', ')}`));
         }
         for (const agent of config.agents) {
-            agent.installedSkills = await updateSkills(agent, projectDir, [...allReplacedSkills]);
+            const result = await updateSkills(agent, projectDir, {
+                excludeSkills: [...allReplacedSkills],
+                force,
+            });
+            agent.installedSkills = result.installedSkills;
+            entriesByAgent.set(agent.id, result.entries);
         }
         // Re-install replacement skills from extensions
         // Fix 3: If manifest fails to load, fall back to installing the base skill
@@ -112,19 +249,68 @@ export async function updateCommand() {
                 console.log(chalk.green(`✓ Re-applied ${totalInjections} extension injection(s)`));
             }
         }
+        // Rebuild managed state after final update + replacement + injection pipeline.
+        const finalReplacedSkills = collectReplacedSkills(extensions);
+        for (const agent of config.agents) {
+            const { base: baseSkills } = partitionSkills(agent.installedSkills);
+            const managedBaseSkills = baseSkills.filter(skill => availableSkills.includes(skill) && !finalReplacedSkills.has(skill));
+            agent.managedSkills = await buildManagedSkillsState(projectDir, agent, managedBaseSkills);
+        }
         config.version = currentVersion;
         await saveConfig(projectDir, config);
         console.log(chalk.green('✓ Skills updated successfully'));
         console.log(chalk.green('✓ Configuration updated'));
         for (const agent of config.agents) {
-            const previousBaseSkills = previousBaseSkillsByAgent.get(agent.id) ?? [];
-            const newSkills = availableSkills.filter(s => !previousBaseSkills.includes(s));
-            const { base: baseSkills, custom: customSkills } = partitionSkills(agent.installedSkills);
-            console.log(chalk.bold(`\n[${agent.id}] Base skills:`));
-            for (const skill of baseSkills) {
-                const isNew = newSkills.includes(skill);
-                console.log(chalk.dim(`  - ${skill}`) + (isNew ? chalk.green(' (new)') : ''));
+            const entries = entriesByAgent.get(agent.id) ?? [];
+            const grouped = groupEntriesByStatus(entries);
+            const changedWithContextWarnings = [];
+            for (const entry of grouped.changed) {
+                const skillContextPath = path.join(projectDir, '.ai-factory', 'skill-context', entry.skill, 'SKILL.md');
+                if (await fileExists(skillContextPath)) {
+                    changedWithContextWarnings.push(entry.skill);
+                }
+            }
+            console.log(chalk.bold(`\n[${agent.id}] Status:`));
+            console.log(chalk.dim(`  changed: ${grouped.changed.length}`));
+            console.log(chalk.dim(`  unchanged: ${grouped.unchanged.length}`));
+            console.log(chalk.dim(`  skipped: ${grouped.skipped.length}`));
+            console.log(chalk.dim(`  removed: ${grouped.removed.length}`));
+            if (grouped.changed.length > 0) {
+                console.log(chalk.bold('  Changed:'));
+                for (const entry of grouped.changed) {
+                    console.log(chalk.dim(`    - ${entry.skill} (${formatReason(entry.reason)})`));
+                }
+            }
+            if (grouped.skipped.length > 0) {
+                console.log(chalk.bold('  Skipped:'));
+                for (const entry of grouped.skipped) {
+                    console.log(chalk.dim(`    - ${entry.skill} (${formatReason(entry.reason)})`));
+                }
+            }
+            if (grouped.removed.length > 0) {
+                console.log(chalk.bold('  Removed:'));
+                for (const entry of grouped.removed) {
+                    console.log(chalk.dim(`    - ${entry.skill} (${formatReason(entry.reason)})`));
+                }
+            }
+            const recoveryEntries = grouped.changed.filter(entry => [
+                'missing-managed-state',
+                'missing-installed-artifact',
+                'source-missing',
+            ].includes(entry.reason));
+            if (recoveryEntries.length > 0) {
+                console.log(chalk.yellow('  WARN: managed state recovered for:'));
+                for (const entry of recoveryEntries) {
+                    console.log(chalk.yellow(`    - ${entry.skill} (${formatReason(entry.reason)})`));
+                }
+            }
+            if (changedWithContextWarnings.length > 0) {
+                console.log(chalk.yellow('  WARN: skill-context override may need review for changed skills:'));
+                for (const skill of changedWithContextWarnings) {
+                    console.log(chalk.yellow(`    - ${skill} (.ai-factory/skill-context/${skill}/SKILL.md)`));
+                }
             }
+            const { custom: customSkills } = partitionSkills(agent.installedSkills);
             if (customSkills.length > 0) {
                 console.log(chalk.bold(`[${agent.id}] Custom skills (preserved):`));
                 for (const skill of customSkills) {

package/dist/cli/commands/update.js.map

@@ -1 +1 @@
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package/dist/cli/commands/upgrade.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"upgrade.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/upgrade.ts"],"names":[],"mappings":"AAuGA,wBAAsB,cAAc,IAAI,OAAO,CAAC,IAAI,CAAC,CAoHpD"}
+{"version":3,"file":"upgrade.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/upgrade.ts"],"names":[],"mappings":"AAuGA,wBAAsB,cAAc,IAAI,OAAO,CAAC,IAAI,CAAC,CAwIpD"}

package/dist/cli/commands/upgrade.js

@@ -98,9 +98,13 @@ export async function upgradeCommand() {
         process.exit(1);
     }
     // Step 1: Migrate legacy plan directories to .ai-factory/plans/
+    // Also ensure newer v2 working directories exist.
+    const aiFactoryDir = path.join(projectDir, '.ai-factory');
     const featuresDir = path.join(projectDir, '.ai-factory', 'features');
     const changesDir = path.join(projectDir, '.ai-factory', 'changes');
     const plansDir = path.join(projectDir, '.ai-factory', 'plans');
+    const evolutionsDir = path.join(aiFactoryDir, 'evolutions');
+    const skillContextDir = path.join(aiFactoryDir, 'skill-context');
     if (await fileExists(changesDir) && !(await fileExists(plansDir))) {
         await fs.move(changesDir, plansDir);
         console.log(chalk.green('✓ Renamed .ai-factory/changes/ → .ai-factory/plans/\n'));
@@ -109,6 +113,21 @@ export async function upgradeCommand() {
         await fs.move(featuresDir, plansDir);
         console.log(chalk.green('✓ Renamed .ai-factory/features/ → .ai-factory/plans/\n'));
     }
+    // Newer v2 structure used by /aif-evolve for incremental patch processing.
+    await fs.ensureDir(evolutionsDir);
+    await fs.ensureDir(skillContextDir);
+    const legacyCursorPath = path.join(aiFactoryDir, 'patch-cursor.json');
+    const cursorPath = path.join(evolutionsDir, 'patch-cursor.json');
+    if (await fileExists(legacyCursorPath)) {
+        if (!(await fileExists(cursorPath))) {
+            await fs.move(legacyCursorPath, cursorPath);
+            console.log(chalk.green('✓ Moved .ai-factory/patch-cursor.json → .ai-factory/evolutions/patch-cursor.json\n'));
+        }
+        else {
+            await removeFile(legacyCursorPath);
+            console.log(chalk.yellow('  WARN: Both cursor files existed; removed .ai-factory/patch-cursor.json and kept .ai-factory/evolutions/patch-cursor.json as source of truth\n'));
+        }
+    }
     const availableSkills = await getAvailableSkills();
     for (const agent of config.agents) {
         const agentConfig = getAgentConfig(agent.id);

package/dist/cli/commands/upgrade.js.map

@@ -1 +1 @@
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package/dist/cli/index.js

@@ -17,6 +17,7 @@ program
 program
     .command('update')
     .description('Update installed skills to latest version')
+    .option('--force', 'Force clean reinstall of currently installed base skills')
     .action(updateCommand);
 program
     .command('upgrade')

package/dist/cli/index.js.map

@@ -1 +1 @@
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package/dist/cli/wizard/prompts.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"prompts.d.ts","sourceRoot":"","sources":["../../../src/cli/wizard/prompts.ts"],"names":[],"mappings":"AAMA,MAAM,WAAW,oBAAoB;IACnC,EAAE,EAAE,MAAM,CAAC;IACX,SAAS,EAAE,OAAO,CAAC;IACnB,aAAa,EAAE,OAAO,CAAC;IACvB,WAAW,EAAE,OAAO,CAAC;IACrB,iBAAiB,EAAE,OAAO,CAAC;IAC3B,aAAa,EAAE,OAAO,CAAC;CACxB;AAED,MAAM,WAAW,aAAa;IAC5B,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,MAAM,EAAE,oBAAoB,EAAE,CAAC;CAChC;AAED,wBAAsB,SAAS,CAAC,eAAe,GAAE,MAAM,EAAO,GAAG,OAAO,CAAC,aAAa,CAAC,CAuGtF"}

package/dist/cli/wizard/prompts.js

@@ -1,6 +1,8 @@
 import inquirer from 'inquirer';
+import chalk from 'chalk';
 import { getAvailableSkills } from '../../core/installer.js';
 import { getAgentConfig, getAgentChoices } from '../../core/agents.js';
+import { formatSkillChoiceName } from './skill-hints.js';
 export async function runWizard(defaultAgentIds = []) {
     const availableSkills = await getAvailableSkills();
     const selectedByDefault = new Set(defaultAgentIds);
@@ -26,7 +28,8 @@ export async function runWizard(defaultAgentIds = []) {
             name: 'selectedSkills',
             message: 'Base skills to install:',
             choices: availableSkills.map(skill => ({
-                name: skill,
+                name: formatSkillChoiceName(skill, hint => chalk.gray(hint)),
+                short: skill,
                 value: skill,
                 checked: true, // All skills selected by default
             })),

package/dist/cli/wizard/prompts.js.map

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package/dist/cli/wizard/skill-hints.d.ts

@@ -0,0 +1,3 @@
+export declare function getSkillHint(skillId: string): string;
+export declare function formatSkillChoiceName(skillId: string, renderHint: (hint: string) => string, maxHintLength?: number): string;
+//# sourceMappingURL=skill-hints.d.ts.map

package/dist/cli/wizard/skill-hints.d.ts.map

@@ -0,0 +1 @@
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