agentsys 5.0.3 → 5.2.0

package/adapters/codex/skills/perf/SKILL.md

@@ -1,469 +0,0 @@
-<!-- AUTO-GENERATED by scripts/gen-adapters.js - DO NOT EDIT -->
----
-name: perf
-description: "Use when user asks to \"run perf\", \"performance investigation\", \"benchmark regression\", \"profiling workflow\", \"baseline performance\". Runs structured perf investigations with baselines, profiling, hypotheses, and decisions."
----
-
-# /perf - Performance Investigation Workflow
-
-Run a rigorous, evidence-driven performance investigation with strict rules, baselines, and reproducible benchmarks.
-
-## Canonical Requirements
-
-All behavior must follow:
-- `docs/perf-requirements.md` (source of truth)
-- `docs/perf-research-methodology.md`
-
-## Arguments
-
-- `--resume`: Continue the latest investigation from `{state-dir}/perf/investigation.json`
-- `--phase <phase>`: Force starting phase (use only when resuming)
-- `--id <id>`: Set investigation id (new only)
-- `--scenario <text>`: Short scenario description
-- `--command <cmd>`: Benchmark command (prints PERF_METRICS markers)
-- `--version <ver>`: Baseline version label
-- `--duration <seconds>`: Benchmark duration override (default 60s; use smaller values for micro-benchmarks)
-- `--runs <n>`: Number of runs for start-to-end benchmarks (use with median aggregation)
-- `--aggregate <median|mean|min|max>`: Aggregation method for multi-run benchmarks (default median)
-- `--quote <text>`: User quote to record in logs
-- `--hypotheses-file <path>`: JSON file with hypothesis list (for hypotheses phase)
-- `--param-env <name>`: Env var for breaking-point value (default PERF_PARAM_VALUE)
-- `--param-min <n>`: Breaking-point min value (default 1)
-- `--param-max <n>`: Breaking-point max value (default 500)
-- `--cpu <limit>`: Constraint CPU limit (default 1)
-- `--memory <limit>`: Constraint memory limit (default 1GB)
-- `--change <summary>`: Optimization change summary
-- `--verdict <continue|stop>`: Decision verdict
-- `--rationale <text>`: Decision rationale
-
-## Phase 1: Initialize Investigation State
-
-```javascript
-const { getPluginRoot } = require('@agentsys/lib/cross-platform');
-const pluginRoot = getPluginRoot('perf');
-if (!pluginRoot) { console.error('Error: Could not locate perf plugin root'); process.exit(1); }
-const investigationState = require(`${pluginRoot}/lib/perf/investigation-state.js`);
-const baselineStore = require(`${pluginRoot}/lib/perf/baseline-store.js`);
-const benchmarkRunner = require(`${pluginRoot}/lib/perf/benchmark-runner.js`);
-const breakingPointRunner = require(`${pluginRoot}/lib/perf/breaking-point-runner.js`);
-const constraintRunner = require(`${pluginRoot}/lib/perf/constraint-runner.js`);
-const profilingRunner = require(`${pluginRoot}/lib/perf/profiling-runner.js`);
-const optimizationRunner = require(`${pluginRoot}/lib/perf/optimization-runner.js`);
-const consolidation = require(`${pluginRoot}/lib/perf/consolidation.js`);
-const checkpoint = require(`${pluginRoot}/lib/perf/checkpoint.js`);
-const argumentParser = require(`${pluginRoot}/lib/perf/argument-parser.js`);
-const codePaths = require(`${pluginRoot}/lib/perf/code-paths.js`);
-const repoMap = require(`${pluginRoot}/lib/repo-map`);
-const fs = require('fs');
-
-const args = argumentParser.parseArguments('$ARGUMENTS');
-const options = {
-  resume: false,
-  phase: null,
-  id: null,
-  scenario: '',
-  command: '',
-  version: '',
-  duration: null,
-  runs: null,
-  aggregate: '',
-  quote: '',
-  hypothesesFile: '',
-  paramEnv: 'PERF_PARAM_VALUE',
-  paramMin: 1,
-  paramMax: 500,
-  cpu: '1',
-  memory: '1GB',
-  change: '',
-  verdict: '',
-  rationale: ''
-};
-
-for (let i = 0; i < args.length; i++) {
-  const arg = args[i];
-  if (arg === '--resume') options.resume = true;
-  else if (arg === '--phase' && args[i + 1]) options.phase = args[++i];
-  else if (arg === '--id' && args[i + 1]) options.id = args[++i];
-  else if (arg === '--scenario' && args[i + 1]) options.scenario = args[++i];
-  else if (arg === '--command' && args[i + 1]) options.command = args[++i];
-  else if (arg === '--version' && args[i + 1]) options.version = args[++i];
-  else if (arg === '--duration' && args[i + 1]) options.duration = Number(args[++i]);
-  else if (arg === '--runs' && args[i + 1]) options.runs = Number(args[++i]);
-  else if (arg === '--aggregate' && args[i + 1]) options.aggregate = args[++i];
-  else if (arg === '--quote' && args[i + 1]) options.quote = args[++i];
-  else if (arg === '--hypotheses-file' && args[i + 1]) options.hypothesesFile = args[++i];
-  else if (arg === '--param-env' && args[i + 1]) options.paramEnv = args[++i];
-  else if (arg === '--param-min' && args[i + 1]) options.paramMin = Number(args[++i]);
-  else if (arg === '--param-max' && args[i + 1]) options.paramMax = Number(args[++i]);
-  else if (arg === '--cpu' && args[i + 1]) options.cpu = args[++i];
-  else if (arg === '--memory' && args[i + 1]) options.memory = args[++i];
-  else if (arg === '--change' && args[i + 1]) options.change = args[++i];
-  else if (arg === '--verdict' && args[i + 1]) options.verdict = args[++i];
-  else if (arg === '--rationale' && args[i + 1]) options.rationale = args[++i];
-}
-
-const cwd = process.cwd();
-const allowedPhases = investigationState.PHASES;
-if (options.phase && !allowedPhases.includes(options.phase)) {
-  console.error(`Invalid phase: ${options.phase}. Allowed: ${allowedPhases.join(', ')}`);
-  process.exit(1);
-}
-
-let state = investigationState.readInvestigation(cwd);
-if (options.resume) {
-  if (!state) {
-    console.error('No active investigation found. Run /perf without --resume first.');
-    process.exit(1);
-  }
-} else {
-  state = investigationState.initializeInvestigation({
-    id: options.id,
-    phase: options.phase,
-    scenario: options.scenario
-  }, cwd);
-}
-
-if (options.phase && options.resume) {
-  state = investigationState.updateInvestigation({ phase: options.phase }, cwd);
-}
-
-const userQuote = options.quote || options.scenario || 'n/a';
-if (options.command || options.version || options.scenario) {
-  state = investigationState.updateInvestigation({
-    scenario: {
-      description: options.scenario || state.scenario?.description || '',
-      metrics: state.scenario?.metrics || [],
-      successCriteria: state.scenario?.successCriteria || '',
-      scenarios: state.scenario?.scenarios || []
-    },
-    benchmark: {
-      command: options.command || state.benchmark?.command || '',
-      version: options.version || state.benchmark?.version || '',
-      duration: Number.isFinite(options.duration) ? options.duration : state.benchmark?.duration,
-      runs: Number.isFinite(options.runs) ? options.runs : state.benchmark?.runs,
-      aggregate: options.aggregate || state.benchmark?.aggregate
-    }
-  }, cwd);
-}
-
-console.log(`
-## /perf Investigation
-
-**ID**: ${state.id}
-**Phase**: ${state.phase}
-**Scenario**: ${state.scenario?.description || 'n/a'}
-
-Running phase handler...
-`);
-
-const phase = state.phase;
-const command = state.benchmark?.command || options.command;
-const version = state.benchmark?.version || options.version;
-
-function requireFields(fields) {
-  const missing = fields.filter(Boolean);
-  if (missing.length > 0) {
-    console.error(`Missing required input(s): ${missing.join(', ')}`);
-    process.exit(1);
-  }
-}
-
-const phaseRequirements = {
-  setup: () => requireFields([
-    state.scenario?.description ? '' : '--scenario',
-    command ? '' : '--command',
-    version ? '' : '--version'
-  ]),
-  baseline: () => requireFields([command ? '' : '--command', version ? '' : '--version']),
-  'breaking-point': () => requireFields([command ? '' : '--command']),
-  constraints: () => requireFields([command ? '' : '--command']),
-  hypotheses: () => requireFields([state.scenario?.description ? '' : '--scenario']),
-  'code-paths': () => requireFields([state.scenario?.description ? '' : '--scenario']),
-  profiling: () => requireFields([]),
-  optimization: () => requireFields([options.change ? '' : '--change']),
-  decision: () => requireFields([options.verdict ? '' : '--verdict', options.rationale ? '' : '--rationale']),
-  consolidation: () => requireFields([version ? '' : '--version'])
-};
-
-async function runPhase() {
-  if (phaseRequirements[phase]) {
-    phaseRequirements[phase]();
-  }
-  switch (phase) {
-    case 'setup': {
-      state = investigationState.updateInvestigation({ phase: 'baseline' }, cwd);
-      investigationState.appendSetupLog({
-        id: state.id,
-        userQuote,
-        scenario: state.scenario?.description || '',
-        command,
-        version,
-        duration: Number.isFinite(options.duration) ? options.duration : state.benchmark?.duration,
-        runs: Number.isFinite(options.runs) ? options.runs : state.benchmark?.runs,
-        aggregate: options.aggregate || state.benchmark?.aggregate
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'setup',
-        id: state.id,
-        baselineVersion: version,
-        deltaSummary: 'n/a'
-      });
-      return;
-    }
-    case 'baseline': {
-      const runs = Number.isFinite(options.runs) ? options.runs : state.benchmark?.runs;
-      const aggregate = options.aggregate || state.benchmark?.aggregate;
-      const result = benchmarkRunner.runBenchmarkSeries(command, {
-        duration: Number.isFinite(options.duration) ? options.duration : undefined,
-        runs,
-        aggregate
-      });
-      baselineStore.writeBaseline(version, { command, metrics: result.metrics }, cwd);
-      const baselinePath = baselineStore.getBaselinePath(version, cwd);
-      investigationState.appendBaselineLog({
-        id: state.id,
-        userQuote,
-        command,
-        metrics: result.metrics,
-        baselinePath,
-        duration: Number.isFinite(options.duration) ? options.duration : state.benchmark?.duration,
-        runs,
-        aggregate: aggregate || (runs ? 'median' : undefined),
-        scenarios: state.scenario?.scenarios
-      }, cwd);
-      state = investigationState.updateInvestigation({ phase: 'breaking-point' }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'baseline',
-        id: state.id,
-        baselineVersion: version,
-        deltaSummary: 'n/a'
-      });
-      return;
-    }
-    case 'breaking-point': {
-      const result = await breakingPointRunner.runBreakingPointSearch({
-        command,
-        paramEnv: options.paramEnv,
-        min: options.paramMin,
-        max: options.paramMax
-      });
-      investigationState.updateInvestigation({
-        breakingPoint: result.breakingPoint,
-        breakingPointHistory: result.history,
-        phase: 'constraints'
-      }, cwd);
-      investigationState.appendBreakingPointLog({
-        id: state.id,
-        userQuote,
-        paramEnv: options.paramEnv,
-        min: options.paramMin,
-        max: options.paramMax,
-        breakingPoint: result.breakingPoint,
-        history: result.history
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'breaking-point',
-        id: state.id,
-        baselineVersion: version || 'n/a',
-        deltaSummary: `breakingPoint=${result.breakingPoint ?? 'n/a'}`
-      });
-      return;
-    }
-    case 'constraints': {
-      const runs = Number.isFinite(options.runs) ? options.runs : state.benchmark?.runs;
-      const aggregate = options.aggregate || state.benchmark?.aggregate;
-      const results = constraintRunner.runConstraintTest({
-        command,
-        constraints: { cpu: options.cpu, memory: options.memory },
-        duration: Number.isFinite(options.duration) ? options.duration : undefined,
-        runs,
-        aggregate
-      });
-      const nextResults = Array.isArray(state.constraintResults) ? state.constraintResults : [];
-      nextResults.push(results);
-      investigationState.updateInvestigation({ constraintResults: nextResults, phase: 'hypotheses' }, cwd);
-      investigationState.appendConstraintLog({
-        id: state.id,
-        userQuote,
-        constraints: results.constraints,
-        delta: results.delta
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'constraints',
-        id: state.id,
-        baselineVersion: version || 'n/a',
-        deltaSummary: 'constraints'
-      });
-      return;
-    }
-    case 'hypotheses': {
-      const gitHistory = checkpoint.getRecentCommits(5);
-      let hypotheses = Array.isArray(state.hypotheses) ? state.hypotheses : [];
-      if (hypotheses.length === 0) {
-        if (!options.hypothesesFile) {
-          console.error('Missing hypotheses. Run perf-theory-gatherer or provide --hypotheses-file.');
-          process.exit(1);
-        }
-        try {
-          const raw = fs.readFileSync(options.hypothesesFile, 'utf8');
-          const parsed = JSON.parse(raw);
-          hypotheses = Array.isArray(parsed.hypotheses) ? parsed.hypotheses : parsed;
-        } catch (error) {
-          console.error(`Failed to load hypotheses file: ${error.message}`);
-          process.exit(1);
-        }
-      }
-      investigationState.updateInvestigation({ hypotheses, phase: 'code-paths' }, cwd);
-      investigationState.appendHypothesesLog({
-        id: state.id,
-        userQuote,
-        hypotheses,
-        gitHistory,
-        hypothesesFile: options.hypothesesFile || null
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'hypotheses',
-        id: state.id,
-        baselineVersion: version || 'n/a',
-        deltaSummary: 'n/a'
-      });
-      return;
-    }
-    case 'code-paths': {
-      const mapStatus = repoMap.status(cwd);
-      if (!mapStatus.exists) {
-        console.log('Repo map not found. Run /repo-map init for better code-path coverage.');
-      }
-      const repoMapStatus = mapStatus.exists
-        ? `available (files=${mapStatus.status?.files ?? 'n/a'}, symbols=${mapStatus.status?.symbols ?? 'n/a'})`
-        : 'missing';
-      const map = repoMap.load(cwd);
-      const result = codePaths.collectCodePaths(map, state.scenario?.description || '');
-      investigationState.updateInvestigation({ codePaths: result.paths, phase: 'profiling' }, cwd);
-      investigationState.appendCodePathsLog({
-        id: state.id,
-        userQuote,
-        keywords: result.keywords,
-        paths: result.paths,
-        repoMapStatus
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'code-paths',
-        id: state.id,
-        baselineVersion: version || 'n/a',
-        deltaSummary: `paths=${result.paths.length}`
-      });
-      return;
-    }
-    case 'profiling': {
-      const result = profilingRunner.runProfiling({ repoPath: cwd, command });
-      if (!result.ok) {
-        console.error(`Profiling failed: ${result.error}`);
-        process.exit(1);
-      }
-      const nextResults = Array.isArray(state.profilingResults) ? state.profilingResults : [];
-      nextResults.push(result.result);
-      investigationState.updateInvestigation({ profilingResults: nextResults, phase: 'optimization' }, cwd);
-      investigationState.appendProfilingLog({
-        id: state.id,
-        userQuote,
-        tool: result.result.tool,
-        command: result.result.command,
-        artifacts: result.result.artifacts,
-        hotspots: result.result.hotspots
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'profiling',
-        id: state.id,
-        baselineVersion: version || 'n/a',
-        deltaSummary: 'n/a'
-      });
-      return;
-    }
-    case 'optimization': {
-      const gitHistory = checkpoint.getRecentCommits(5);
-      const runs = Number.isFinite(options.runs) ? options.runs : state.benchmark?.runs;
-      const aggregate = options.aggregate || state.benchmark?.aggregate;
-      const result = optimizationRunner.runOptimizationExperiment({
-        command,
-        changeSummary: options.change,
-        duration: Number.isFinite(options.duration) ? options.duration : undefined,
-        runs,
-        aggregate
-      });
-      const nextResults = Array.isArray(state.results) ? state.results : [];
-      nextResults.push(result);
-      investigationState.updateInvestigation({ results: nextResults, phase: 'decision' }, cwd);
-      investigationState.appendOptimizationLog({
-        id: state.id,
-        userQuote,
-        change: options.change,
-        delta: result.delta,
-        verdict: result.verdict,
-        gitHistory,
-        runs,
-        aggregate: aggregate || (runs ? 'median' : undefined)
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'optimization',
-        id: state.id,
-        baselineVersion: version || 'n/a',
-        deltaSummary: 'n/a'
-      });
-      return;
-    }
-    case 'decision': {
-      const decision = { verdict: options.verdict, rationale: options.rationale };
-      investigationState.updateInvestigation({ decision, phase: 'consolidation' }, cwd);
-      investigationState.appendDecisionLog({
-        id: state.id,
-        userQuote,
-        verdict: options.verdict,
-        rationale: options.rationale,
-        resultsCount: Array.isArray(state.results) ? state.results.length : 0
-      }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'decision',
-        id: state.id,
-        baselineVersion: version || 'n/a',
-        deltaSummary: 'n/a'
-      });
-      return;
-    }
-    case 'consolidation': {
-      const baseline = baselineStore.readBaseline(version, cwd);
-      if (!baseline) {
-        console.error(`Baseline not found for version ${version}`);
-        process.exit(1);
-      }
-      const result = consolidation.consolidateBaseline({ version, baseline }, cwd);
-      investigationState.appendConsolidationLog({
-        id: state.id,
-        userQuote,
-        version,
-        path: result.path
-      }, cwd);
-      investigationState.updateInvestigation({ phase: 'complete' }, cwd);
-      checkpoint.commitCheckpoint({
-        phase: 'consolidation',
-        id: state.id,
-        baselineVersion: version,
-        deltaSummary: 'n/a'
-      });
-      return;
-    }
-    default:
-      return;
-  }
-}
-
-await runPhase();
-```
-
-## Output
-
-- Updated `{state-dir}/perf/investigation.json`
-- Investigation log at `{state-dir}/perf/investigations/<id>.md`
-- Baseline files at `{state-dir}/perf/baselines/<version>.json`
-
-Begin the performance investigation now.

package/adapters/codex/skills/repo-map/SKILL.md

@@ -1,132 +0,0 @@
-<!-- AUTO-GENERATED by scripts/gen-adapters.js - DO NOT EDIT -->
----
-name: repo-map
-description: "Use when user asks to \"create repo map\", \"generate repo map\", \"update repo map\", \"repo map status\", \"map symbols\". Builds and updates AST-based repo map using ast-grep."
----
-
-# /repo-map - AST Repo Map
-
-Generate a cached repository map of symbols and imports using ast-grep. This enables faster drift detection and more accurate code context.
-
-## Arguments
-
-Parse from `$ARGUMENTS`:
-
-- **Action**: `init` | `update` | `status` | `rebuild` (default: `status`)
-- `--force`: Force rebuild (for `init`)
-- `--full`: Force full rebuild (for `update`)
-
-Examples:
-
-- `/repo-map init`
-- `/repo-map update --full`
-- `/repo-map status`
-
-## Execution
-
-### 1) Load Repo Map Module
-
-```javascript
-const { getPluginRoot } = require('@agentsys/lib/cross-platform');
-const pluginRoot = getPluginRoot('repo-map');
-if (!pluginRoot) { console.error('Error: Could not locate repo-map plugin root'); process.exit(1); }
-const repoMap = require(`${pluginRoot}/lib/repo-map`);
-```
-
-### 2) Parse Arguments
-
-```javascript
-const args = '$ARGUMENTS'.split(' ').filter(Boolean);
-const action = (args[0] || 'status').toLowerCase();
-
-const options = {
-  force: args.includes('--force'),
-  full: args.includes('--full')
-};
-```
-
-### 3) Ensure ast-grep is Available
-
-```javascript
-const installed = await repoMap.checkAstGrepInstalled();
-if (!installed.found || !repoMap.installer.meetsMinimumVersion(installed.version)) {
-  const suggestion = repoMap.getInstallInstructions();
-  const choice = await request_user_input({
-    questions: [{
-      header: 'Install ast-grep?',
-      question: 'ast-grep is required for repo-map. Install now?',
-      options: [
-        { label: 'Install via npm', description: 'Runs: npm install -g @ast-grep/cli' },
-        { label: 'Skip for now', description: 'Show install instructions and exit' }
-      ]
-    }]
-  });
-
-  if (choice?.[0] === 'Install via npm') {
-    await Bash('npm install -g @ast-grep/cli');
-  } else {
-    console.log(suggestion);
-    return;
-  }
-}
-```
-
-### 4) Run Action
-
-```javascript
-let result;
-
-if (action === 'init' || action === 'rebuild') {
-  result = await repoMap.init(process.cwd(), {
-    force: action === 'rebuild' || options.force
-  });
-} else if (action === 'update') {
-  result = await repoMap.update(process.cwd(), { full: options.full });
-} else if (action === 'status') {
-  result = repoMap.status(process.cwd());
-} else {
-  console.log('Unknown action. Use: init | update | status | rebuild');
-  return;
-}
-
-if (result?.success === false) {
-  console.log(result.error || 'Repo-map failed');
-  if (result.installSuggestion) console.log(result.installSuggestion);
-  return;
-}
-
-if (action === 'status' && !result.exists) {
-  console.log('No repo-map found. Run /repo-map init to generate one.');
-  return;
-}
-```
-
-### 5) Validate Results (init/update only)
-
-After `init` or `update`, run validation using the lightweight agent:
-
-```javascript
-if (action === 'init' || action === 'rebuild' || action === 'update') {
-  const summary = result?.map?.stats || result?.summary || result?.changes || {};
-  const validation = await Task({
-    subagent_type: 'repo-map:map-validator',
-    prompt: `Validate repo-map results. Summary: ${JSON.stringify(summary)}`
-  });
-  console.log(validation);
-}
-```
-
-## Output Format
-
-```markdown
-## Repo Map Result
-
-**Action**: init|update|status
-**Files**: <count>
-**Symbols**: <count>
-**Languages**: <list>
-**Commit**: <hash>
-
-### Notes
-- <warnings or validation results>
-```