agents-reverse-engineer 0.1.1

package/dist/state/types.d.ts

@@ -0,0 +1,54 @@
+/**
+ * State types for tracking file generation
+ */
+import type Database from 'better-sqlite3';
+/**
+ * Record of a file's generation state
+ */
+export interface FileRecord {
+    /** Relative path from project root */
+    path: string;
+    /** SHA-256 hash of file content */
+    content_hash: string;
+    /** ISO timestamp when .sum was generated (null if not yet generated) */
+    sum_generated_at: string | null;
+    /** Commit hash when file was last analyzed */
+    last_analyzed_commit: string | null;
+}
+/**
+ * Record of a generation/update run
+ */
+export interface RunRecord {
+    /** Auto-incremented ID */
+    id: number;
+    /** Git commit hash at run time */
+    commit_hash: string;
+    /** ISO timestamp when run completed */
+    completed_at: string;
+    /** Number of files analyzed in this run */
+    files_analyzed: number;
+    /** Number of files skipped (unchanged) */
+    files_skipped: number;
+}
+/**
+ * Interface for state database operations
+ */
+export interface StateDatabase {
+    /** Get file record by path */
+    getFile(path: string): FileRecord | undefined;
+    /** Insert or update file record */
+    upsertFile(record: FileRecord): void;
+    /** Delete file record */
+    deleteFile(path: string): void;
+    /** Get all file records */
+    getAllFiles(): FileRecord[];
+    /** Get the most recent run record */
+    getLastRun(): RunRecord | undefined;
+    /** Insert a new run record */
+    insertRun(run: Omit<RunRecord, 'id'>): number;
+    /** Close the database connection */
+    close(): void;
+    /** Get the underlying database for transactions */
+    getDb(): Database.Database;
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/state/types.d.ts.map

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package/dist/state/types.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=types.js.map

package/dist/state/types.js.map

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+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/state/types.ts"],"names":[],"mappings":""}

package/dist/types/index.d.ts

@@ -0,0 +1,39 @@
+/**
+ * Shared types used across modules
+ */
+/**
+ * Log level for controlling output verbosity
+ */
+export type LogLevel = 'verbose' | 'normal' | 'quiet';
+/**
+ * Information about an excluded file
+ */
+export interface ExcludedFile {
+    /** Absolute or relative path to the excluded file */
+    path: string;
+    /** Reason for exclusion (e.g., "gitignore pattern", "binary file", "vendor directory") */
+    reason: string;
+}
+/**
+ * Result of the file discovery process
+ */
+export interface DiscoveryResult {
+    /** List of file paths that should be analyzed */
+    files: string[];
+    /** List of files that were excluded with reasons */
+    excluded: ExcludedFile[];
+}
+/**
+ * Statistics about the discovery process
+ */
+export interface DiscoveryStats {
+    /** Total number of files found */
+    totalFiles: number;
+    /** Number of files included for analysis */
+    includedFiles: number;
+    /** Number of files excluded */
+    excludedFiles: number;
+    /** Breakdown of exclusion reasons */
+    exclusionReasons: Record<string, number>;
+}
+//# sourceMappingURL=index.d.ts.map

package/dist/types/index.d.ts.map

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package/dist/types/index.js

@@ -0,0 +1,5 @@
+/**
+ * Shared types used across modules
+ */
+export {};
+//# sourceMappingURL=index.js.map

package/dist/types/index.js.map

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package/dist/update/index.d.ts

@@ -0,0 +1,10 @@
+/**
+ * Update module
+ *
+ * Provides incremental documentation update functionality.
+ * Coordinates state management, change detection, and orphan cleanup.
+ */
+export { UpdateOrchestrator, createUpdateOrchestrator, type UpdatePlan, } from './orchestrator.js';
+export { cleanupOrphans, cleanupEmptyDirectoryDocs, getAffectedDirectories, } from './orphan-cleaner.js';
+export type { UpdateOptions, UpdateResult, UpdateProgress, CleanupResult, } from './types.js';
+//# sourceMappingURL=index.d.ts.map

package/dist/update/index.d.ts.map

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package/dist/update/index.js

@@ -0,0 +1,9 @@
+/**
+ * Update module
+ *
+ * Provides incremental documentation update functionality.
+ * Coordinates state management, change detection, and orphan cleanup.
+ */
+export { UpdateOrchestrator, createUpdateOrchestrator, } from './orchestrator.js';
+export { cleanupOrphans, cleanupEmptyDirectoryDocs, getAffectedDirectories, } from './orphan-cleaner.js';
+//# sourceMappingURL=index.js.map

package/dist/update/index.js.map

@@ -0,0 +1 @@
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package/dist/update/orchestrator.d.ts

@@ -0,0 +1,91 @@
+import type { Config } from '../config/schema.js';
+import type { StateDatabase, RunRecord } from '../state/index.js';
+import { type FileChange } from '../change-detection/index.js';
+import type { UpdateOptions, CleanupResult } from './types.js';
+/**
+ * Result of update preparation (before analysis).
+ */
+export interface UpdatePlan {
+    /** Files to analyze (added or modified) */
+    filesToAnalyze: FileChange[];
+    /** Files to skip (unchanged based on content hash) */
+    filesToSkip: string[];
+    /** Cleanup result (files to delete) */
+    cleanup: CleanupResult;
+    /** Directories that need AGENTS.md regeneration */
+    affectedDirs: string[];
+    /** Base commit (from last run or initial) */
+    baseCommit: string;
+    /** Current commit */
+    currentCommit: string;
+    /** Whether this is first run (no prior state) */
+    isFirstRun: boolean;
+}
+/**
+ * Orchestrates incremental documentation updates.
+ */
+export declare class UpdateOrchestrator {
+    private config;
+    private projectRoot;
+    private db;
+    constructor(config: Config, projectRoot: string);
+    /**
+     * Get path to state database.
+     */
+    private getDbPath;
+    /**
+     * Ensure state directory exists and open database.
+     */
+    openState(): Promise<StateDatabase>;
+    /**
+     * Close database connection.
+     */
+    close(): void;
+    /**
+     * Check prerequisites for update.
+     *
+     * @throws Error if not in a git repository
+     */
+    checkPrerequisites(): Promise<void>;
+    /**
+     * Prepare update plan without executing analysis.
+     *
+     * @param options - Update options
+     * @returns Update plan with files to analyze and cleanup actions
+     */
+    preparePlan(options?: UpdateOptions): Promise<UpdatePlan>;
+    /**
+     * Update state for a successfully analyzed file.
+     *
+     * @param relativePath - Relative path to the file
+     * @param contentHash - SHA-256 hash of file content
+     * @param currentCommit - Current git commit hash
+     */
+    recordFileAnalyzed(relativePath: string, contentHash: string, currentCommit: string): Promise<void>;
+    /**
+     * Remove file from state (for deleted files).
+     */
+    removeFileState(relativePath: string): Promise<void>;
+    /**
+     * Record a completed update run.
+     *
+     * @param commitHash - Git commit hash at completion
+     * @param filesAnalyzed - Number of files analyzed
+     * @param filesSkipped - Number of files skipped
+     * @returns Run ID
+     */
+    recordRun(commitHash: string, filesAnalyzed: number, filesSkipped: number): Promise<number>;
+    /**
+     * Get last run information.
+     */
+    getLastRun(): Promise<RunRecord | undefined>;
+    /**
+     * Check if this is the first run (no prior state).
+     */
+    isFirstRun(): Promise<boolean>;
+}
+/**
+ * Create an update orchestrator.
+ */
+export declare function createUpdateOrchestrator(config: Config, projectRoot: string): UpdateOrchestrator;
+//# sourceMappingURL=orchestrator.d.ts.map

package/dist/update/orchestrator.d.ts.map

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package/dist/update/orchestrator.js

@@ -0,0 +1,204 @@
+/**
+ * Update orchestrator
+ *
+ * Coordinates incremental documentation updates:
+ * 1. Check git repository status
+ * 2. Get last run from state database
+ * 3. Detect changed files since last run
+ * 4. Clean up orphaned .sum files
+ * 5. Prepare analysis tasks for changed files
+ * 6. Track affected directories for AGENTS.md regeneration
+ * 7. Persist new state after successful completion
+ */
+import * as path from 'node:path';
+import { mkdir } from 'node:fs/promises';
+import { openDatabase } from '../state/index.js';
+import { isGitRepo, getCurrentCommit, getChangedFiles, computeContentHash, } from '../change-detection/index.js';
+import { cleanupOrphans, getAffectedDirectories } from './orphan-cleaner.js';
+/** State directory name (relative to project root) */
+const STATE_DIR = '.agents-reverse-engineer';
+/** State database filename */
+const STATE_DB = 'state.db';
+/**
+ * Orchestrates incremental documentation updates.
+ */
+export class UpdateOrchestrator {
+    config;
+    projectRoot;
+    db = null;
+    constructor(config, projectRoot) {
+        this.config = config;
+        this.projectRoot = projectRoot;
+    }
+    /**
+     * Get path to state database.
+     */
+    getDbPath() {
+        return path.join(this.projectRoot, STATE_DIR, STATE_DB);
+    }
+    /**
+     * Ensure state directory exists and open database.
+     */
+    async openState() {
+        if (this.db)
+            return this.db;
+        // Ensure state directory exists
+        const stateDir = path.join(this.projectRoot, STATE_DIR);
+        await mkdir(stateDir, { recursive: true });
+        this.db = openDatabase(this.getDbPath());
+        return this.db;
+    }
+    /**
+     * Close database connection.
+     */
+    close() {
+        if (this.db) {
+            this.db.close();
+            this.db = null;
+        }
+    }
+    /**
+     * Check prerequisites for update.
+     *
+     * @throws Error if not in a git repository
+     */
+    async checkPrerequisites() {
+        const isRepo = await isGitRepo(this.projectRoot);
+        if (!isRepo) {
+            throw new Error(`Not a git repository: ${this.projectRoot}\n` +
+                'The update command requires a git repository for change detection.');
+        }
+    }
+    /**
+     * Prepare update plan without executing analysis.
+     *
+     * @param options - Update options
+     * @returns Update plan with files to analyze and cleanup actions
+     */
+    async preparePlan(options = {}) {
+        await this.checkPrerequisites();
+        const db = await this.openState();
+        // Get current commit
+        const currentCommit = await getCurrentCommit(this.projectRoot);
+        // Get last run to determine base commit
+        const lastRun = db.getLastRun();
+        const isFirstRun = !lastRun;
+        const baseCommit = lastRun?.commit_hash ?? currentCommit;
+        // If first run or same commit, no committed changes
+        let changes = [];
+        if (!isFirstRun && baseCommit !== currentCommit) {
+            const result = await getChangedFiles(this.projectRoot, baseCommit, { includeUncommitted: options.includeUncommitted });
+            changes = result.changes;
+        }
+        else if (options.includeUncommitted) {
+            // Even if no committed changes, check uncommitted
+            const result = await getChangedFiles(this.projectRoot, currentCommit, // Use current as base (no committed diff)
+            { includeUncommitted: true });
+            changes = result.changes;
+        }
+        // Separate files by status for different handling
+        const filesToAnalyze = changes.filter(c => c.status === 'added' || c.status === 'modified' || c.status === 'renamed');
+        const deletedOrRenamed = changes.filter(c => c.status === 'deleted' || c.status === 'renamed');
+        // Filter out files that haven't actually changed (content hash match)
+        const actuallyChanged = [];
+        const filesToSkip = [];
+        for (const change of filesToAnalyze) {
+            if (change.status === 'added') {
+                // New files are always analyzed
+                actuallyChanged.push(change);
+            }
+            else {
+                // For modified/renamed, check content hash
+                const filePath = path.join(this.projectRoot, change.path);
+                try {
+                    const currentHash = await computeContentHash(filePath);
+                    const stored = db.getFile(change.path);
+                    if (!stored || stored.content_hash !== currentHash) {
+                        actuallyChanged.push(change);
+                    }
+                    else {
+                        filesToSkip.push(change.path);
+                    }
+                }
+                catch {
+                    // File can't be read - skip it
+                    filesToSkip.push(change.path);
+                }
+            }
+        }
+        // Cleanup orphans (deleted and renamed old paths)
+        const cleanup = await cleanupOrphans(this.projectRoot, deletedOrRenamed, options.dryRun ?? false);
+        // Get directories affected by changes (for AGENTS.md regeneration)
+        const affectedDirs = Array.from(getAffectedDirectories(actuallyChanged));
+        return {
+            filesToAnalyze: actuallyChanged,
+            filesToSkip,
+            cleanup,
+            affectedDirs,
+            baseCommit,
+            currentCommit,
+            isFirstRun,
+        };
+    }
+    /**
+     * Update state for a successfully analyzed file.
+     *
+     * @param relativePath - Relative path to the file
+     * @param contentHash - SHA-256 hash of file content
+     * @param currentCommit - Current git commit hash
+     */
+    async recordFileAnalyzed(relativePath, contentHash, currentCommit) {
+        const db = await this.openState();
+        db.upsertFile({
+            path: relativePath,
+            content_hash: contentHash,
+            sum_generated_at: new Date().toISOString(),
+            last_analyzed_commit: currentCommit,
+        });
+    }
+    /**
+     * Remove file from state (for deleted files).
+     */
+    async removeFileState(relativePath) {
+        const db = await this.openState();
+        db.deleteFile(relativePath);
+    }
+    /**
+     * Record a completed update run.
+     *
+     * @param commitHash - Git commit hash at completion
+     * @param filesAnalyzed - Number of files analyzed
+     * @param filesSkipped - Number of files skipped
+     * @returns Run ID
+     */
+    async recordRun(commitHash, filesAnalyzed, filesSkipped) {
+        const db = await this.openState();
+        return db.insertRun({
+            commit_hash: commitHash,
+            completed_at: new Date().toISOString(),
+            files_analyzed: filesAnalyzed,
+            files_skipped: filesSkipped,
+        });
+    }
+    /**
+     * Get last run information.
+     */
+    async getLastRun() {
+        const db = await this.openState();
+        return db.getLastRun();
+    }
+    /**
+     * Check if this is the first run (no prior state).
+     */
+    async isFirstRun() {
+        const db = await this.openState();
+        return !db.getLastRun();
+    }
+}
+/**
+ * Create an update orchestrator.
+ */
+export function createUpdateOrchestrator(config, projectRoot) {
+    return new UpdateOrchestrator(config, projectRoot);
+}
+//# sourceMappingURL=orchestrator.js.map

package/dist/update/orchestrator.js.map

@@ -0,0 +1 @@
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package/dist/update/orphan-cleaner.d.ts

@@ -0,0 +1,30 @@
+import type { FileChange } from '../change-detection/types.js';
+import type { CleanupResult } from './types.js';
+/**
+ * Clean up orphaned .sum files and empty AGENTS.md files.
+ *
+ * @param projectRoot - Absolute path to project root
+ * @param changes - List of file changes (deleted and renamed files need cleanup)
+ * @param dryRun - If true, don't actually delete files
+ * @returns Cleanup result with lists of deleted files
+ */
+export declare function cleanupOrphans(projectRoot: string, changes: FileChange[], dryRun?: boolean): Promise<CleanupResult>;
+/**
+ * Check if a directory has any source files remaining.
+ * If not, delete its AGENTS.md.
+ *
+ * @param dirPath - Absolute path to directory
+ * @param dryRun - If true, don't actually delete
+ * @returns true if AGENTS.md was deleted
+ */
+export declare function cleanupEmptyDirectoryDocs(dirPath: string, dryRun?: boolean): Promise<boolean>;
+/**
+ * Get list of directories that should have their AGENTS.md regenerated.
+ *
+ * Includes parent directories of changed files up to project root.
+ *
+ * @param changes - List of file changes (non-deleted files)
+ * @returns Set of relative directory paths
+ */
+export declare function getAffectedDirectories(changes: FileChange[]): Set<string>;
+//# sourceMappingURL=orphan-cleaner.d.ts.map

package/dist/update/orphan-cleaner.d.ts.map

@@ -0,0 +1 @@
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package/dist/update/orphan-cleaner.js

@@ -0,0 +1,151 @@
+/**
+ * Orphan cleanup for stale .sum and AGENTS.md files
+ *
+ * Handles:
+ * - Deleting .sum files when source files are deleted
+ * - Deleting .sum files for renamed files (at old path)
+ * - Deleting AGENTS.md from directories with no remaining source files
+ */
+import { unlink, readdir, stat } from 'node:fs/promises';
+import * as path from 'node:path';
+/**
+ * Files to ignore when checking if a directory has source files.
+ * These are generated files, not source files.
+ */
+const GENERATED_FILES = new Set([
+    'AGENTS.md',
+    'CLAUDE.md',
+    'ARCHITECTURE.md',
+    'STACK.md',
+]);
+/**
+ * Clean up orphaned .sum files and empty AGENTS.md files.
+ *
+ * @param projectRoot - Absolute path to project root
+ * @param changes - List of file changes (deleted and renamed files need cleanup)
+ * @param dryRun - If true, don't actually delete files
+ * @returns Cleanup result with lists of deleted files
+ */
+export async function cleanupOrphans(projectRoot, changes, dryRun = false) {
+    const result = {
+        deletedSumFiles: [],
+        deletedAgentsMd: [],
+    };
+    // Collect paths that need .sum cleanup
+    const pathsToClean = [];
+    for (const change of changes) {
+        if (change.status === 'deleted') {
+            pathsToClean.push(change.path);
+        }
+        else if (change.status === 'renamed' && change.oldPath) {
+            // For renames, clean up the old path's .sum
+            pathsToClean.push(change.oldPath);
+        }
+    }
+    // Delete .sum files for deleted/renamed source files
+    for (const relativePath of pathsToClean) {
+        const sumPath = path.join(projectRoot, `${relativePath}.sum`);
+        const deleted = await deleteIfExists(sumPath, dryRun);
+        if (deleted) {
+            result.deletedSumFiles.push(relativePath + '.sum');
+        }
+    }
+    // Collect affected directories for AGENTS.md cleanup
+    const affectedDirs = new Set();
+    for (const relativePath of pathsToClean) {
+        const dir = path.dirname(relativePath);
+        if (dir && dir !== '.') {
+            affectedDirs.add(dir);
+        }
+    }
+    // Check each affected directory for empty AGENTS.md
+    for (const dir of affectedDirs) {
+        const dirPath = path.join(projectRoot, dir);
+        const cleaned = await cleanupEmptyDirectoryDocs(dirPath, dryRun);
+        if (cleaned) {
+            result.deletedAgentsMd.push(path.join(dir, 'AGENTS.md'));
+        }
+    }
+    return result;
+}
+/**
+ * Delete a file if it exists.
+ *
+ * @returns true if file was deleted (or would be in dry run)
+ */
+async function deleteIfExists(filePath, dryRun) {
+    try {
+        await stat(filePath);
+        if (!dryRun) {
+            await unlink(filePath);
+        }
+        return true;
+    }
+    catch {
+        // File doesn't exist
+        return false;
+    }
+}
+/**
+ * Check if a directory has any source files remaining.
+ * If not, delete its AGENTS.md.
+ *
+ * @param dirPath - Absolute path to directory
+ * @param dryRun - If true, don't actually delete
+ * @returns true if AGENTS.md was deleted
+ */
+export async function cleanupEmptyDirectoryDocs(dirPath, dryRun = false) {
+    try {
+        const entries = await readdir(dirPath);
+        // Check if directory has any source files
+        // Source files are: not .sum files, not generated docs, not hidden files
+        const hasSourceFiles = entries.some(entry => {
+            // Skip hidden files
+            if (entry.startsWith('.'))
+                return false;
+            // Skip .sum files
+            if (entry.endsWith('.sum'))
+                return false;
+            // Skip known generated files
+            if (GENERATED_FILES.has(entry))
+                return false;
+            // Everything else counts as a source file
+            return true;
+        });
+        if (!hasSourceFiles) {
+            const agentsPath = path.join(dirPath, 'AGENTS.md');
+            return await deleteIfExists(agentsPath, dryRun);
+        }
+        return false;
+    }
+    catch {
+        // Directory doesn't exist or can't be read
+        return false;
+    }
+}
+/**
+ * Get list of directories that should have their AGENTS.md regenerated.
+ *
+ * Includes parent directories of changed files up to project root.
+ *
+ * @param changes - List of file changes (non-deleted files)
+ * @returns Set of relative directory paths
+ */
+export function getAffectedDirectories(changes) {
+    const dirs = new Set();
+    for (const change of changes) {
+        // Skip deleted files - they don't affect directory docs
+        if (change.status === 'deleted')
+            continue;
+        // Add all parent directories up to root
+        let dir = path.dirname(change.path);
+        while (dir && dir !== '.') {
+            dirs.add(dir);
+            dir = path.dirname(dir);
+        }
+        // Include root directory
+        dirs.add('.');
+    }
+    return dirs;
+}
+//# sourceMappingURL=orphan-cleaner.js.map

package/dist/update/orphan-cleaner.js.map

@@ -0,0 +1 @@
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