agentopology 0.9.1 → 0.10.0

package/dist/__tests__/e2e/guard-check.test.js

@@ -0,0 +1,316 @@
+/**
+ * `agentopology guard <file> --check` (GC): which gates, approval steps and
+ * permission rules a project actually enforces today. It reads; it never
+ * writes. Built on compile.at: brief-check (a gate before an agent, run by
+ * before-agent.sh), copy-check (a gate after an agent, a SubagentStop hook),
+ * approve (a human step before drafter), and settings ask and deny rules.
+ */
+import { describe, it, expect, beforeEach, afterEach } from "vitest";
+import { spawnSync } from "node:child_process";
+import * as fs from "node:fs";
+import * as os from "node:os";
+import { resolve, dirname, join } from "node:path";
+import { fileURLToPath } from "node:url";
+import { parse } from "../../parser/index.js";
+import { claudeCodeBinding } from "../../bindings/claude-code.js";
+import { checkGuards } from "../../guard/check.js";
+import { validate } from "../../parser/validator.js";
+const here = dirname(fileURLToPath(import.meta.url));
+const FIXTURE = resolve(here, "fixtures/compile.at");
+const CLI = resolve(here, "../../../dist/cli/index.js");
+const ast = parse(fs.readFileSync(FIXTURE, "utf-8"));
+const SCRIPTS = ".claude/skills/compile/scripts";
+let root;
+const at = (p) => join(root, p);
+const settings = () => JSON.parse(fs.readFileSync(at(".claude/settings.json"), "utf8"));
+const writeSettings = (s) => fs.writeFileSync(at(".claude/settings.json"), JSON.stringify(s, null, 2));
+const item = (id) => checkGuards(ast, root).items.find((i) => i.id === id);
+beforeEach(() => {
+    root = fs.mkdtempSync(join(os.tmpdir(), "at-guard-check-"));
+    for (const f of claudeCodeBinding.scaffold(ast)) {
+        fs.mkdirSync(dirname(at(f.path)), { recursive: true });
+        fs.writeFileSync(at(f.path), f.content);
+    }
+    // copy-check runs the user's own python script; give it one.
+    fs.mkdirSync(at("docs/tools"), { recursive: true });
+    fs.writeFileSync(at("docs/tools/check.py"), "print('ok')\n");
+});
+afterEach(() => fs.rmSync(root, { recursive: true, force: true }));
+describe("guard --check on a freshly scaffolded project", () => {
+    it("[N31] [GC1] a gate after an agent refuses by its SubagentStop hook", () => {
+        const g = item("copy-check");
+        expect(g).toMatchObject({ kind: "gate", strength: "refuse", by: "hook" });
+        expect(g.where).toContain("SubagentStop");
+        expect(g.where).toContain("drafter");
+    });
+    it("[N31] [GC1] a gate before an agent refuses by the before-agent guard; its unwritten script is reported as blocking every run", () => {
+        const g = item("brief-check");
+        expect(g).toMatchObject({ kind: "gate", strength: "refuse", by: "hook" });
+        expect(g.where).toContain("PreToolUse");
+        expect(g.notes.join(" ")).toMatch(/stub.*blocks every run/);
+    });
+    it("[N31] [GC1] a human step before an agent refuses by asking in the session, and says -p denies it", () => {
+        const h = item("approve");
+        expect(h).toMatchObject({ kind: "human", strength: "refuse", by: "hook" });
+        expect(h.notes.join(" ")).toMatch(/-p/);
+    });
+    it("[N31] [GC1] deny and ask rules refuse by settings", () => {
+        expect(item("deny mcp__notes__delete")).toMatchObject({ kind: "permission", strength: "refuse", by: "settings" });
+        expect(item("ask Bash(git push:*)")).toMatchObject({ kind: "permission", strength: "refuse", by: "settings" });
+    });
+    it("[N31] [GC1] the summary counts steps that refuse: k of m (v10's enforcement number)", () => {
+        const r = checkGuards(ast, root);
+        expect(r.enforcement).toEqual({ refuse: 3, of: 3 });
+        expect(r.missing).toBe(0);
+    });
+});
+describe("guard --check reports what has gone missing", () => {
+    it("[N31] [GC2] the SubagentStop entry removed from settings.json: the gate enforces nothing", () => {
+        const s = settings();
+        s.hooks.SubagentStop = s.hooks.SubagentStop.filter((e) => e.matcher !== "drafter");
+        writeSettings(s);
+        const g = item("copy-check");
+        expect(g.strength).toBe("none");
+        expect(g.notes.join(" ")).toContain("settings.json");
+        expect(checkGuards(ast, root).enforcement).toEqual({ refuse: 2, of: 3 });
+    });
+    it("[N31] [GC2] a hook entry whose command is relative fails open off the project root", () => {
+        const s = settings();
+        for (const e of s.hooks.SubagentStop)
+            for (const h of e.hooks)
+                if (h.command)
+                    h.command = h.command.replace(/"\$CLAUDE_PROJECT_DIR\/(.*)"/, "$1");
+        writeSettings(s);
+        const g = item("copy-check");
+        expect(g.strength).toBe("none");
+        expect(g.notes.join(" ")).toMatch(/relative/);
+    });
+    it("[N31] [GC2] the before-agent guard without onFailure: block is reported as failing open if the hook can't start", () => {
+        const s = settings();
+        for (const e of s.hooks.PreToolUse)
+            for (const h of e.hooks)
+                delete h.onFailure;
+        writeSettings(s);
+        expect(item("brief-check").strength).toBe("refuse");
+        expect(item("brief-check").notes.join(" ")).toMatch(/onFailure/);
+    });
+    it("[N31] [GC2] the gate wrapper script deleted: none", () => {
+        fs.rmSync(at(`${SCRIPTS}/gate-copy-check.sh`));
+        expect(item("copy-check").strength).toBe("none");
+    });
+    it("[N31] [GC2] before-agent.sh edited so it no longer runs the gate: none", () => {
+        const p = at(`${SCRIPTS}/before-agent.sh`);
+        fs.writeFileSync(p, fs.readFileSync(p, "utf8").replace(/.*gate-brief-check\.sh.*\n/, ""));
+        expect(item("brief-check").strength).toBe("none");
+    });
+    it("[N31] [GC2] the user's check script missing: the gate still refuses, and every run is blocked", () => {
+        fs.rmSync(at("docs/tools/check.py"));
+        const g = item("copy-check");
+        expect(g.strength).toBe("refuse");
+        expect(g.notes.join(" ")).toMatch(/missing.*blocks every run/);
+    });
+    it("[N31] [GC2] a deny rule removed from settings.json: none", () => {
+        const s = settings();
+        s.permissions.deny = [];
+        writeSettings(s);
+        expect(item("deny mcp__notes__delete").strength).toBe("none");
+    });
+    it("[N31] [GC2] a hand-built hook it cannot tie to a step is listed, not silently counted", () => {
+        expect(checkGuards(ast, root).unattributed).toEqual([]);
+        const s = settings();
+        s.hooks.PreToolUse.push({ matcher: "Bash", hooks: [{ type: "command", command: 'python3 "$CLAUDE_PROJECT_DIR/harness/lock/hook.py"' }] });
+        writeSettings(s);
+        const r = checkGuards(ast, root);
+        expect(r.unattributed).toEqual(['PreToolUse Bash: python3 "$CLAUDE_PROJECT_DIR/harness/lock/hook.py"']);
+        expect(r.enforcement).toEqual({ refuse: 3, of: 3 });
+    });
+    it("[N31] [GC2] no .claude/settings.json at all: every hook and rule is none", () => {
+        fs.rmSync(at(".claude/settings.json"));
+        const r = checkGuards(ast, root);
+        expect(r.enforcement.refuse).toBe(0);
+        expect(r.items.filter((i) => i.strength === "none").length).toBe(r.items.length);
+    });
+});
+describe("guard --check from the CLI", () => {
+    const cli = (...args) => spawnSync(process.execPath, [CLI, ...args], { cwd: root, encoding: "utf8" });
+    it("[N31] [GC3] prints one line per item and the enforcement count, writes nothing, exits 0 when nothing is missing", () => {
+        const before = spawnSync("find", [root, "-type", "f"], { encoding: "utf8" }).stdout;
+        const r = cli("guard", FIXTURE, "--check", "--dir", root);
+        expect(r.status).toBe(0);
+        expect(r.stdout).toMatch(/gate copy-check\s+refuse\s+by: hook/);
+        expect(r.stdout).toMatch(/enforcement: 3 of 3 steps refuse/);
+        expect(r.stdout).toMatch(/Claude Code \d+\.\d+\.\d+/);
+        expect(spawnSync("find", [root, "-type", "f"], { encoding: "utf8" }).stdout).toBe(before);
+    });
+    it("[N31] [GC3] exits 1 when something the binding generates is missing on disk", () => {
+        fs.rmSync(at(`${SCRIPTS}/gate-copy-check.sh`));
+        const r = cli("guard", FIXTURE, "--check", "--dir", root);
+        expect(r.status).toBe(1);
+        expect(r.stdout).toMatch(/gate copy-check\s+none/);
+    });
+    it("[N31] [GC3] guard without --check says only the read-only mode exists yet", () => {
+        const r = cli("guard", FIXTURE, "--dir", root);
+        expect(r.status).toBe(1);
+        expect(r.stderr).toMatch(/--check/);
+    });
+});
+/**
+ * Citations (N33). A hand-built guard can be credited when the file cites it:
+ * a gate with `by: code` and `at: "path:line"` is checked on disk (the file,
+ * the line, and the `match:` text within 5 lines), and a gate whose edge says
+ * `[guard: lock-bash]` is credited with that hook when the hook is in
+ * settings.json and declares its strength. A broken citation is `none` and
+ * exits 1; a strength the file writes down as `none` is reported, not failed.
+ */
+// release and voice carry no commands: the binding compiles no hook for a gate
+// before them, so only the cited guard can credit it. (With commands, such a
+// gate is guarded by before-action.sh: see action-guard.test.ts.)
+const CITED = `topology cited : [pipeline] {
+  meta {
+    version: "1.0.0"
+    description: "Citation probe"
+  }
+
+  orchestrator {
+    model: sonnet
+    handles: [release, voice]
+  }
+
+  agent writer {
+    model: sonnet
+    description: "Writes the post"
+    prompt {
+      Write the post.
+    }
+  }
+
+  human owner-yes {
+    description: "The owner approves the post"
+  }
+
+  action release {
+    kind: external
+    description: "Posts it"
+  }
+
+  action voice {
+    kind: external
+    description: "Records the voice-over"
+  }
+
+  hooks {
+    hook lock-bash {
+      on: PreToolUse
+      matcher: "Bash"
+      run: "python3 harness/lock/hook.py"
+      strength: refuse
+      bypass: "AT_UNLOCK"
+    }
+    hook note-bash {
+      on: PostToolUse
+      matcher: "Bash"
+      run: "python3 harness/lock/note.py"
+    }
+  }
+
+  gates {
+    gate lock-release {
+      after: owner-yes
+      before: release
+      run: "scripts/lock.sh"
+      on-fail: halt
+    }
+    gate lock-voice {
+      after: owner-yes
+      before: voice
+      run: "scripts/lock-voice.sh"
+      on-fail: halt
+    }
+    gate doctrine {
+      after: owner-yes
+      before: voice
+      strength: refuse
+      by: code
+      at: "tools/px.py:5"
+      match: "PX_ALLOW_NO_DOCTRINE"
+      bypass: "PX_ALLOW_NO_DOCTRINE"
+    }
+  }
+
+  flow {
+    writer -> owner-yes
+    owner-yes -> release [guard: lock-bash]
+    owner-yes -> voice [guard: note-bash]
+    writer -> voice [strength: none]
+  }
+}
+`;
+describe("guard --check credits what the file cites", () => {
+    const cast = parse(CITED);
+    let proj;
+    const put = (p, text) => { fs.mkdirSync(dirname(join(proj, p)), { recursive: true }); fs.writeFileSync(join(proj, p), text); };
+    const lines = (n, at, text) => Array.from({ length: n }, (_, i) => (i + 1 === at ? text : `line ${i + 1}`)).join("\n") + "\n";
+    const handBuilt = (hooks) => put(".claude/settings.json", JSON.stringify({ hooks }, null, 2));
+    const LOCK = { PreToolUse: [{ matcher: "Bash", hooks: [{ type: "command", command: '/usr/bin/python3 "$CLAUDE_PROJECT_DIR/harness/lock/hook.py"' }] }] };
+    const find = (id) => checkGuards(cast, proj).items.find((i) => i.id === id);
+    beforeEach(() => {
+        proj = fs.mkdtempSync(join(os.tmpdir(), "at-guard-cite-"));
+        put("tools/px.py", lines(20, 7, 'if os.environ.get("PX_ALLOW_NO_DOCTRINE"): return'));
+        handBuilt(LOCK);
+    });
+    afterEach(() => fs.rmSync(proj, { recursive: true, force: true }));
+    it("[N33] the file parses and validates clean", () => {
+        expect(validate(cast).filter((r) => r.level === "error")).toEqual([]);
+    });
+    it("[N33] a by: code citation whose match text is within 5 lines: refuse by code, cited not proven, bypass named", () => {
+        const g = find("doctrine");
+        expect(g).toMatchObject({ kind: "gate", strength: "refuse", by: "code" });
+        expect(g.where).toContain("tools/px.py:5");
+        expect(g.notes.join(" ")).toMatch(/cited, not proven/);
+        expect(g.notes.join(" ")).toMatch(/bypass.*PX_ALLOW_NO_DOCTRINE/);
+    });
+    it("[N33] the match text moved away from the cited line: none, and exit-worthy", () => {
+        put("tools/px.py", lines(20, 15, 'if os.environ.get("PX_ALLOW_NO_DOCTRINE"): return'));
+        const g = find("doctrine");
+        expect(g.strength).toBe("none");
+        expect(g.notes.join(" ")).toMatch(/PX_ALLOW_NO_DOCTRINE.*not within 5 lines of line 5/);
+        expect(checkGuards(cast, proj).missing).toBeGreaterThan(0);
+    });
+    it("[N33] the cited file missing, or the line past its end: none", () => {
+        fs.rmSync(join(proj, "tools/px.py"));
+        expect(find("doctrine").notes.join(" ")).toMatch(/tools\/px\.py is missing/);
+        put("tools/px.py", lines(3, 2, "PX_ALLOW_NO_DOCTRINE"));
+        expect(find("doctrine").strength).toBe("none");
+        expect(find("doctrine").notes.join(" ")).toMatch(/has 3 lines/);
+    });
+    it("[N33] a gate with no hook of its own is credited by the guard its edge cites, when that hook is in settings.json", () => {
+        const g = find("lock-release");
+        expect(g).toMatchObject({ strength: "refuse", by: "hook" });
+        expect(g.where).toContain("lock-bash");
+        expect(g.notes.join(" ")).toMatch(/bypass.*AT_UNLOCK/);
+        expect(checkGuards(cast, proj).unattributed).toEqual([]);
+    });
+    it("[N33] the cited hook missing from settings.json: the gate stays hope, and says why", () => {
+        handBuilt({});
+        const g = find("lock-release");
+        expect(g.strength).toBe("hope");
+        expect(g.notes.join(" ")).toMatch(/lock-bash.*not in .claude\/settings.json/);
+    });
+    it("[N33] a cited hook that declares no strength is not credited", () => {
+        handBuilt({ ...LOCK, PostToolUse: [{ matcher: "Bash", hooks: [{ type: "command", command: 'python3 "$CLAUDE_PROJECT_DIR/harness/lock/note.py"' }] }] });
+        const g = find("lock-voice");
+        expect(g.strength).toBe("hope");
+        expect(g.notes.join(" ")).toMatch(/note-bash declares no strength/);
+    });
+    it("[N33] an edge whose strength is written down as none is reported as declared, and is not a failure", () => {
+        const e = find("writer -> voice");
+        expect(e).toMatchObject({ kind: "edge", strength: "none", by: "prose" });
+        expect(e.notes.join(" ")).toMatch(/declared/);
+        put("tools/px.py", lines(20, 7, 'if os.environ.get("PX_ALLOW_NO_DOCTRINE"): return'));
+        expect(checkGuards(cast, proj).missing).toBe(0);
+    });
+    it("[N33] the count reads the credit: 2 of 4 steps refuse (doctrine by code, lock-release by its cited hook)", () => {
+        expect(checkGuards(cast, proj).enforcement).toEqual({ refuse: 2, of: 4 });
+    });
+});
+//# sourceMappingURL=guard-check.test.js.map

package/dist/__tests__/e2e/guard-check.test.js.map

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package/dist/__tests__/e2e/guard-target.test.d.ts

@@ -0,0 +1,11 @@
+/**
+ * [N41] `guard <file> --target claude-code` writes only the guard part of what
+ * scaffold would write, into a project that was built by hand: the hook
+ * scripts settings.json runs, the gate wrappers and check scripts they call,
+ * and the `hooks` and `permissions` keys of settings.json, merged. It never
+ * writes an agent, skill, command, rule, .mcp.json or CLAUDE.md, never
+ * overwrites a script the user edited or a check that is no longer a stub,
+ * and a rerun changes nothing.
+ */
+export {};
+//# sourceMappingURL=guard-target.test.d.ts.map

package/dist/__tests__/e2e/guard-target.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"guard-target.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/e2e/guard-target.test.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG"}

package/dist/__tests__/e2e/guard-target.test.js

@@ -0,0 +1,198 @@
+/**
+ * [N41] `guard <file> --target claude-code` writes only the guard part of what
+ * scaffold would write, into a project that was built by hand: the hook
+ * scripts settings.json runs, the gate wrappers and check scripts they call,
+ * and the `hooks` and `permissions` keys of settings.json, merged. It never
+ * writes an agent, skill, command, rule, .mcp.json or CLAUDE.md, never
+ * overwrites a script the user edited or a check that is no longer a stub,
+ * and a rerun changes nothing.
+ */
+import { describe, it, expect, beforeEach } from "vitest";
+import { spawnSync } from "node:child_process";
+import * as fs from "node:fs";
+import * as os from "node:os";
+import { createHash } from "node:crypto";
+import { resolve, dirname, join, relative } from "node:path";
+import { fileURLToPath } from "node:url";
+import { parse } from "../../parser/index.js";
+import { claudeCodeBinding } from "../../bindings/claude-code.js";
+import { guardFiles, planGuardTarget } from "../../guard/target.js";
+import { checkGuards } from "../../guard/check.js";
+const here = dirname(fileURLToPath(import.meta.url));
+const FIXTURE = resolve(here, "fixtures/compile.at");
+const CLI = resolve(here, "../../../dist/cli/index.js");
+const ast = parse(fs.readFileSync(FIXTURE, "utf-8"));
+const SCRIPTS = ".claude/skills/compile/scripts";
+const AGENT = ".claude/agents/drafter/AGENT.md";
+const AGENT_BYTES = "---\nname: drafter\ndescription: by hand\n---\nWrite the copy. Hand-written, do not touch.\n";
+const USER_CHECK = "#!/usr/bin/env python3\nprint('my own check')\n";
+const USER_BRIEF = "#!/usr/bin/env bash\n# mine, implemented\nexit 0\n";
+let root;
+const at = (p) => join(root, p);
+const settings = () => JSON.parse(fs.readFileSync(at(".claude/settings.json"), "utf8"));
+const cli = (...a) => spawnSync("node", [CLI, "guard", FIXTURE, "--target", "claude-code", "--dir", root, ...a], { encoding: "utf8" });
+function snapshot() {
+    const out = {};
+    const walk = (d) => {
+        for (const e of fs.readdirSync(d, { withFileTypes: true })) {
+            const p = join(d, e.name);
+            if (e.isDirectory()) {
+                out[relative(root, p) + "/"] = "";
+                walk(p);
+            }
+            else
+                out[relative(root, p)] = createHash("sha256").update(fs.readFileSync(p)).digest("hex");
+        }
+    };
+    walk(root);
+    return out;
+}
+beforeEach(() => {
+    root = fs.mkdtempSync(join(os.tmpdir(), "at-guard-target-"));
+    fs.mkdirSync(at(".claude/agents/drafter"), { recursive: true });
+    fs.writeFileSync(at(AGENT), AGENT_BYTES);
+    fs.writeFileSync(at(".claude/settings.json"), JSON.stringify({
+        hooks: { PreToolUse: [{ matcher: "Bash", hooks: [{ type: "command", command: "bash \"$CLAUDE_PROJECT_DIR/.claude/hooks/mine.sh\"" }] }] },
+        permissions: { allow: ["Bash(ls:*)"] },
+        model: "sonnet",
+    }, null, 2));
+    fs.mkdirSync(at("docs/tools"), { recursive: true });
+    fs.writeFileSync(at("docs/tools/check.py"), USER_CHECK);
+    fs.mkdirSync(at(SCRIPTS), { recursive: true });
+    fs.writeFileSync(at(`${SCRIPTS}/brief-check.sh`), USER_BRIEF);
+});
+describe("[N41] guard --target", () => {
+    it("[N41] keeps the hook scripts, the gates they call and the checks the gates run, and nothing else", () => {
+        const paths = guardFiles(claudeCodeBinding.scaffold(ast)).map((f) => f.path).sort();
+        expect(paths).toContain(`${SCRIPTS}/before-agent.sh`);
+        expect(paths).toContain(`${SCRIPTS}/gate-brief-check.sh`);
+        expect(paths).toContain(`${SCRIPTS}/gate-copy-check.sh`);
+        expect(paths).toContain(`${SCRIPTS}/brief-check.sh`);
+        expect(paths).toContain("docs/tools/check.py");
+        expect(paths).toContain(".claude/settings.json");
+        for (const p of paths)
+            expect(p).not.toMatch(/AGENT\.md|SKILL\.md|\.mcp\.json|CLAUDE\.md|rules\/|commands\/|crontab|schedule-|action-/);
+    });
+    it("[N41] the function plans the same as the command and writes nothing", () => {
+        const before = snapshot();
+        const plan = planGuardTarget(ast, root, "compile.at");
+        expect(snapshot()).toEqual(before);
+        expect(plan.actions.some((a) => a.path === `${SCRIPTS}/before-agent.sh` && a.type === "create")).toBe(true);
+    });
+    it("[N41] writes our guard, leaves the agent and the user's hook and permission", () => {
+        const r = cli();
+        expect(r.status).toBe(0);
+        expect(fs.readFileSync(at(AGENT), "utf8")).toBe(AGENT_BYTES);
+        const s = settings();
+        expect(JSON.stringify(s.hooks.PreToolUse)).toContain(".claude/hooks/mine.sh");
+        expect(s.permissions.allow).toContain("Bash(ls:*)");
+        expect(s.permissions.deny).toContain("mcp__notes__delete");
+        expect(JSON.stringify(s.hooks.PreToolUse)).toContain("before-agent.sh");
+        expect(JSON.stringify(s.hooks.SubagentStop)).toContain("gate-copy-check.sh");
+        expect(s.model).toBe("sonnet");
+        expect(fs.existsSync(at(`${SCRIPTS}/before-agent.sh`))).toBe(true);
+        expect(fs.existsSync(at(`${SCRIPTS}/gate-brief-check.sh`))).toBe(true);
+        for (const p of [".mcp.json", "CLAUDE.md", ".claude/skills/compile/SKILL.md", ".claude/rules/compile.md", ".claude/agents/auditor/AGENT.md", "crontab.fragment"]) {
+            expect(fs.existsSync(at(p)), p).toBe(false);
+        }
+        expect(s.hooks.Stop).toBeUndefined(); // a prompt hook is not a guard script
+    });
+    it("[N41] a second run changes nothing and adds no duplicates", () => {
+        cli();
+        const first = snapshot();
+        const hooks = JSON.stringify(settings().hooks);
+        const r = cli();
+        expect(r.status).toBe(0);
+        expect(snapshot()).toEqual(first);
+        expect(JSON.stringify(settings().hooks)).toBe(hooks);
+        const perms = settings().permissions.allow;
+        expect(new Set(perms).size).toBe(perms.length);
+    });
+    it("[N41] --dry-run prints the plan and writes nothing", () => {
+        const before = snapshot();
+        const r = cli("--dry-run");
+        expect(r.status).toBe(0);
+        expect(r.stdout).toContain("before-agent.sh");
+        expect(snapshot()).toEqual(before);
+    });
+    it("[N41] a hand-written check, and a check no longer a stub, are untouched and reported", () => {
+        const r = cli();
+        expect(fs.readFileSync(at("docs/tools/check.py"), "utf8")).toBe(USER_CHECK);
+        expect(fs.readFileSync(at(`${SCRIPTS}/brief-check.sh`), "utf8")).toBe(USER_BRIEF);
+        expect(r.stdout).toContain("docs/tools/check.py");
+        expect(r.stdout).toMatch(/brief-check\.sh.*(skipped|kept)/);
+    });
+    it("[N41] a script the user edited after a guard run is kept on the next one", () => {
+        cli();
+        const p = at(`${SCRIPTS}/gate-brief-check.sh`);
+        fs.appendFileSync(p, "# my edit\n");
+        const edited = fs.readFileSync(p, "utf8");
+        const r = cli();
+        expect(fs.readFileSync(p, "utf8")).toBe(edited);
+        expect(r.stdout).toMatch(/gate-brief-check\.sh.*(edited|kept)/);
+    });
+    it("[N41] then runs guard --check: the gates refuse and the exit is 0", () => {
+        const r = cli();
+        expect(r.status).toBe(0);
+        expect(r.stdout).toMatch(/brief-check[^\n]*refuse/);
+        expect(r.stdout).toMatch(/copy-check[^\n]*refuse/);
+        const report = checkGuards(ast, root);
+        expect(report.items.filter((i) => i.kind === "gate").every((i) => i.strength === "refuse")).toBe(true);
+        expect(report.missing).toBe(0);
+    });
+    it("[N41] on a bare directory it exits 1 until the stubs are written, like --check", () => {
+        const bare = fs.mkdtempSync(join(os.tmpdir(), "at-guard-target-bare-"));
+        const r = spawnSync("node", [CLI, "guard", FIXTURE, "--target", "claude-code", "--dir", bare], { encoding: "utf8" });
+        expect(fs.existsSync(join(bare, SCRIPTS, "before-agent.sh"))).toBe(true);
+        expect(r.stdout).toContain("enforcement:");
+    });
+    it("[N41] picks up the before-action.sh of a gate before a script step and guard --check reports it as refuse", () => {
+        const src = `topology ship : [pipeline] {
+  meta {
+    version: "1.0.0"
+    description: "Render then publish"
+  }
+  orchestrator {
+    model: sonnet
+    handles: [render, publish]
+  }
+  action render {
+    kind: external
+    commands: ["./tool render"]
+  }
+  action publish {
+    kind: external
+    commands: ["./tool publish"]
+    unit-from: "./tool publish (\\S+)"
+  }
+  records {
+    record trace { path: "logs/{unit}/trace.jsonl" }
+  }
+  gates {
+    gate publish-ready {
+      after: render
+      before: publish
+      ledger: trace
+      on-fail: halt
+    }
+  }
+  flow { render -> publish }
+}
+`;
+        const dir = fs.mkdtempSync(join(os.tmpdir(), "at-guard-target-action-"));
+        const file = join(dir, "ship.at");
+        fs.writeFileSync(file, src);
+        const r = spawnSync("node", [CLI, "guard", file, "--target", "claude-code", "--dir", dir], { encoding: "utf8" });
+        const script = join(dir, ".claude/skills/ship/scripts/before-action.sh");
+        expect(fs.existsSync(script), r.stdout + r.stderr).toBe(true);
+        const cfg = fs.readFileSync(join(dir, ".claude/settings.json"), "utf8");
+        expect(cfg).toContain("before-action.sh");
+        expect(r.status, r.stdout + r.stderr).toBe(0);
+        expect(r.stdout).toMatch(/publish-ready[^\n]*refuse/);
+        const report = checkGuards(parse(src), dir);
+        const gate = report.items.find((i) => i.kind === "gate");
+        expect(gate?.strength).toBe("refuse");
+        expect(gate?.by).toBe("hook");
+    });
+});
+//# sourceMappingURL=guard-target.test.js.map

package/dist/__tests__/e2e/guard-target.test.js.map

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package/dist/__tests__/e2e/inventory.test.d.ts

@@ -0,0 +1,18 @@
+/**
+ * `agentopology inventory <dir>` and `validate <file> --inventory` (N34):
+ * which live things in a project the .at accounts for, and which things the
+ * .at points at that are not there.
+ *
+ * inventory lists what is live under a project (the .claude tree, each
+ * settings.json hook handler, .mcp.json servers, package.json scripts), with a
+ * sha256 fingerprint per file. It reads and prints; it never writes.
+ *
+ * Coverage matches each live thing to the .at in two ways: the file or hook is
+ * what scaffold would write from this .at, or the .at points at it by hand
+ * (file:, a hook's run, a gate's run, a tool's script, at:, an mcp server).
+ * A live thing nothing accounts for is unmapped (a warning). A path the .at
+ * points at that is not on disk is missing (an error, exit 1). Things tagged
+ * "e" (the platform, the machine) are counted apart and never required.
+ */
+export {};
+//# sourceMappingURL=inventory.test.d.ts.map

package/dist/__tests__/e2e/inventory.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"inventory.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/e2e/inventory.test.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG"}