agentopology 0.5.2 → 0.7.0

package/README.md

@@ -96,7 +96,7 @@ who works, when they work, and what they know when they work. One file, two ways
                         ┌────────────┐
       ┌──────────────┐  │  Parser &  │   scaffold ──▶ Platform configs
       │   .at file   │─▶│  Validator │──┤                ├── .claude/agents/
-      │  (you write) │  │  93 rules  │  │                ├── <topology>.workflow.js
+      │  (you write) │  │  99 rules  │  │                ├── <topology>.workflow.js
       └──────────────┘  └────────────┘  │                ├── .codex/  .cursor/rules/
                                         │                ├── .openclaw/  .github/agents/
                                         │                └── .kiro/  …
@@ -234,7 +234,7 @@ In Claude Code, type `/agentopology` — or just ask naturally:
 Say **"I want a code review team with an analyzer, security scanner, and reviewer"** — the skill:
 
 1. Generates the `.at` file with the right syntax
-2. Validates it against 93 rules
+2. Validates it against 99 rules
 3. Scaffolds it to Claude Code, OpenClaw, Cursor, or any target
 
 **Full agent team in under 2 minutes.** No docs to read. No syntax to memorize. You describe what you want, the skill handles the rest.
@@ -566,7 +566,7 @@ import { parse, validate, bindings } from "agentopology";
 // Parse
 const ast = parse(atSource);
 
-// Validate (93 built-in rules, V1-V93)
+// Validate (99 built-in rules, V1-V99)
 const issues = validate(ast);
 
 // Scaffold — generate platform files
@@ -624,7 +624,7 @@ You can `agentopology visualize` it into an interactive graph. You can hand it t
 | **Switch platforms** | Rewrite everything | Change `--target` |
 | **Add an agent** | Update 5-12 files across 3 tools | Add 4 lines to `.at` file |
 | **See the architecture** | Read YAML, JSON, TOML, Markdown across 6 dirs | One `.at` file. Or `visualize` it. |
-| **Validate** | Hope for the best | 93 built-in rules catch errors before deploy |
+| **Validate** | Hope for the best | 99 built-in rules catch errors before deploy |
 | **Onboard someone** | "Read these 15 files and figure it out" | "Read this `.at` file" |
 | **Version control** | Diff 47 generated files | Diff one `.at` file |
 | **Move to a new tool** | Start over | `--target new-tool` |
@@ -646,7 +646,7 @@ You can `agentopology visualize` it into an interactive graph. You can hand it t
 ## CLI Reference
 
 ```
-agentopology validate <file>              Validate an .at file (93 rules)
+agentopology validate <file>              Validate an .at file (99 rules)
 agentopology plan <file>                  Resolve for interpreted execution — no files written
 agentopology scaffold <file> --target <t> Generate platform configs
 agentopology sync <file> --target <t> --dir <d>  Sync platform files back to .at

package/dist/__tests__/e2e/compile.test.d.ts

@@ -0,0 +1,12 @@
+/**
+ * End to end: what scaffold writes, Claude Code reads as meant.
+ *
+ * Phase 3 of the compile audit. Each test is a construct that used to compile
+ * to config Claude Code skipped (an agent without a description, a url server
+ * without type), misread (`yes` as a boolean, a regex matcher breaking YAML)
+ * or never fired (a hook on AgentStop, a prompt hook sent as a command). The
+ * fixture (fixtures/compile.at) holds them all; the live suite starts real
+ * Claude Code on it too.
+ */
+export {};
+//# sourceMappingURL=compile.test.d.ts.map

package/dist/__tests__/e2e/compile.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"compile.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/e2e/compile.test.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG"}

package/dist/__tests__/e2e/compile.test.js

@@ -0,0 +1,219 @@
+/**
+ * End to end: what scaffold writes, Claude Code reads as meant.
+ *
+ * Phase 3 of the compile audit. Each test is a construct that used to compile
+ * to config Claude Code skipped (an agent without a description, a url server
+ * without type), misread (`yes` as a boolean, a regex matcher breaking YAML)
+ * or never fired (a hook on AgentStop, a prompt hook sent as a command). The
+ * fixture (fixtures/compile.at) holds them all; the live suite starts real
+ * Claude Code on it too.
+ */
+import { describe, it, expect } from "vitest";
+import * as fs from "node:fs";
+import { resolve, dirname } from "node:path";
+import { fileURLToPath } from "node:url";
+import { parse } from "../../parser/index.js";
+import { validate } from "../../parser/validator.js";
+import { scriptNameFromRun, runParts } from "../../parser/run.js";
+import { claudeCodeBinding } from "../../bindings/claude-code.js";
+import { STUB_MARKER } from "../../bindings/lib/stub.js";
+const here = dirname(fileURLToPath(import.meta.url));
+const ast = parse(fs.readFileSync(resolve(here, "fixtures/compile.at"), "utf-8"));
+const files = new Map(claudeCodeBinding.scaffold(ast).map((f) => [f.path, f]));
+const read = (p) => {
+    const f = files.get(p);
+    if (!f)
+        throw new Error(`not generated: ${p}`);
+    return f.content;
+};
+const settings = JSON.parse(read(".claude/settings.json"));
+const drafter = read(".claude/agents/drafter/AGENT.md");
+const auditor = read(".claude/agents/auditor/AGENT.md");
+describe("the fixture itself", () => {
+    it("validates with no errors", () => {
+        expect(validate(ast).filter((r) => r.level === "error")).toEqual([]);
+    });
+});
+describe("hooks fire on events Claude Code has, in the form it reads", () => {
+    it("[N5] a prompt hook is a prompt handler, in settings and in an agent's frontmatter", () => {
+        expect(settings.hooks.Stop[0].hooks[0]).toEqual({
+            type: "prompt",
+            prompt: "Check the session ended with a summary: reply ok true or false.",
+        });
+        expect(drafter).toContain('- type: "prompt"\n          prompt: "Did the draft cite a source? Answer ok: false if not."');
+        // and no shell stub is planned for a prompt
+        expect([...files.keys()].filter((p) => /judge|review/.test(p))).toEqual([]);
+    });
+    it("[N6] universal events map to Claude Code's (AgentStop is SubagentStop; Stop inside an agent)", () => {
+        expect(settings.hooks.AgentStop).toBeUndefined();
+        expect(settings.hooks.SubagentStop.map((e) => e.matcher)).toContain("drafter");
+        expect(drafter).not.toContain("AgentStop");
+        expect(drafter).toMatch(/^ {2}Stop:$/m);
+    });
+    it("[N9] a regex matcher stays a valid YAML string in an agent's frontmatter", () => {
+        // `\.` inside a YAML double-quoted string is an invalid escape: the whole
+        // frontmatter failed to parse and Claude Code dropped the agent.
+        expect(drafter).toContain(String.raw `- matcher: "Edit|Write\\.md$"`);
+    });
+});
+describe("agents register as written", () => {
+    it("[N10] a manual agent keeps its description (Claude Code skips an agent without one) and says it runs on request", () => {
+        expect(auditor).toMatch(/^description: Audits a draft on request\. Use only when the user asks for this agent by name/m);
+    });
+    it("[N8] permissions confirm and bypass compile to real permissionMode values", () => {
+        expect(drafter).not.toContain("permissionMode");
+        expect(auditor).toContain("permissionMode: bypassPermissions");
+    });
+    it("[N17] a scalar YAML would read as another type is quoted", () => {
+        expect(drafter).toContain('description: "yes"');
+        expect(drafter).toMatch(/^model: sonnet$/m);
+    });
+});
+describe("MCP and permissions", () => {
+    it("[N4] a url server gets type: http, so Claude Code does not skip it", () => {
+        const mcp = JSON.parse(read(".mcp.json"));
+        expect(mcp.mcpServers.search).toEqual({ url: "https://search.example.com/mcp", type: "http" });
+    });
+    it("[N7] MCP names convert whole-server, wildcard and dotted forms, in tools and in permissions", () => {
+        expect(drafter).toContain('tools: "Read, mcp__notes, mcp__search__*, mcp__search__find.all"');
+        expect(settings.permissions.allow).toEqual(["Read", "mcp__search"]);
+        expect(settings.permissions.deny).toEqual(["mcp__notes__delete"]);
+    });
+    it("[N14] settings ask rules are emitted", () => {
+        expect(settings.permissions.ask).toEqual(["Bash(git push:*)"]);
+    });
+});
+describe("a run: line is a command with arguments", () => {
+    it("[C3] the script is the word after the interpreter, never an argument", () => {
+        const run = "python3 docs/tools/check.py check-dir docs/show/SLUG --out OUT/frames-critic.json";
+        expect(runParts(run)).toEqual({
+            interpreter: "python3",
+            script: "docs/tools/check.py",
+            args: ["check-dir", "docs/show/SLUG", "--out", "OUT/frames-critic.json"],
+        });
+        expect(scriptNameFromRun(run)).toBe("check.py");
+        const planned = [...files.keys()];
+        expect(planned.filter((p) => /SLUG|frames-critic/.test(p))).toEqual([]);
+        // the gate runs the real script, from the project root, arguments kept
+        expect(read(".claude/skills/compile/scripts/gate-copy-check.sh")).toContain('python3 "$CLAUDE_PROJECT_DIR/docs/tools/check.py" check-dir docs/show/SLUG --out OUT/frames-critic.json');
+        // a stub fills the gap only until the user's script exists
+        expect(files.get("docs/tools/check.py")?.createOnly).toBe(true);
+    });
+    it("[N19] scaffold output is byte-stable: no date in any generated file", () => {
+        const today = new Date().toISOString().slice(0, 10);
+        expect([...files.values()].filter((f) => f.content.includes(today)).map((f) => f.path)).toEqual([]);
+    });
+});
+describe("gates and human steps are enforced before the agent they guard", () => {
+    const script = read(".claude/skills/compile/scripts/before-agent.sh");
+    it("[C4] a gate after an action runs before its next agent launches (PreToolUse on the Agent tool)", () => {
+        expect(settings.hooks.PreToolUse).toContainEqual({
+            matcher: "Agent|Task",
+            hooks: [{ type: "command", command: 'bash "$CLAUDE_PROJECT_DIR/.claude/skills/compile/scripts/before-agent.sh"' }],
+        });
+        expect(script).toMatch(/drafter\)\n[\s\S]*bash "\$DIR\/gate-brief-check\.sh" >&2 \|\| exit 2/);
+        // not also a SubagentStop hook on a node Claude Code never registers
+        const matchers = settings.hooks.SubagentStop.map((e) => e.matcher);
+        expect(matchers).not.toContain("intake");
+    });
+    it("[H1] a human node is an approval step: Claude Code asks before launching the next agent; no AGENT.md", () => {
+        expect([...files.keys()]).not.toContain(".claude/agents/approve/AGENT.md");
+        expect(script).toContain(`ask 'Approval step "approve": The editor approves the brief before drafting'`);
+        expect(script).toContain(`permissionDecision: "ask"`);
+        expect(read(".claude/skills/compile/SKILL.md")).toMatch(/## Approval steps[\s\S]*### Approve\nThe editor approves/);
+    });
+});
+describe("the topology's context does not compete with the project's own", () => {
+    it("[C2] context goes to .claude/rules/<topology>.md, never a CLAUDE.md", () => {
+        expect([...files.keys()].filter((p) => /(^|\/)CLAUDE\.md$/.test(p))).toEqual([]);
+        expect(read(".claude/rules/compile.md")).toMatch(/^# Compile\n/);
+    });
+});
+describe("a skill's instructions reach the model", () => {
+    it("[N12] prompt: path tells Claude to read and follow the file; a prompt block is the body", () => {
+        const brief = read(".claude/skills/brief/SKILL.md");
+        expect(brief).not.toContain("See:");
+        expect(brief).toContain("Read `prompts/brief.md` before anything else and follow it");
+        expect(read(".claude/skills/tone/SKILL.md")).toMatch(/## Instructions\n\n### Tone\nShort sentences\. No jargon\./);
+    });
+});
+describe("actions, tools and schedules run what they declare", () => {
+    it("[A3] an action's commands are emitted whatever its kind; one without commands is a marked stub that fails", () => {
+        expect(read(".claude/skills/compile/scripts/action-fetch.sh")).toContain("curl -fsS https://feeds.example.com/brief -o brief.json");
+        const digest = read(".claude/skills/compile/scripts/action-digest.sh");
+        expect(digest).toContain(STUB_MARKER);
+        expect(digest).toMatch(/exit 1\n$/);
+        // an inline action is done in conversation: not a stub
+        expect(read(".claude/skills/compile/scripts/action-intake.sh")).not.toContain(STUB_MARKER);
+    });
+    it("[A3b] a tool's stub goes where its script: points, never a copy beside it", () => {
+        expect(files.get("tools/render.py")?.createOnly).toBe(true);
+        expect(files.has(".claude/skills/compile/scripts/render.py")).toBe(false);
+        expect(read(".claude/skills/compile/scripts/count.sh")).toContain(STUB_MARKER);
+    });
+    it("[B4] schedules run headless from the project root, call the real action path, and every: becomes cron", () => {
+        const nightly = read("scripts/schedule-nightly.sh");
+        expect(nightly).toContain('cd "$(dirname "$0")/.."');
+        expect(nightly).toContain('claude -p "Run your scheduled task (nightly)." --agent drafter');
+        expect(read("scripts/schedule-weekly-digest.sh")).toContain("bash .claude/skills/compile/scripts/action-digest.sh");
+        const cron = read("crontab.fragment");
+        expect(cron).toContain("*/15 * * * * bash scripts/schedule-nightly.sh");
+        expect(cron).toContain("0 0 * * 0 bash scripts/schedule-weekly-digest.sh");
+        // 7 minutes has no cron form: left commented, and scaffold warns
+        expect(cron).toContain("# every: 7m bash scripts/schedule-odd.sh");
+    });
+});
+describe("nothing written in the .at is dropped without a message", () => {
+    it("[N21] a gate (or hook, tool, job) outside its container block is a V98 error, not silently ignored", () => {
+        const src = fs.readFileSync(resolve(here, "fixtures/compile.at"), "utf-8").replace("  flow {", '  gate stray {\n    after: drafter\n    run: "scripts/stray.sh"\n  }\n\n  job lost {\n    cron: "0 * * * *"\n    agent: drafter\n  }\n\n  flow {');
+        const v98 = validate(parse(src)).filter((r) => r.rule === "V98");
+        expect(v98.map((r) => r.message)).toEqual([
+            '"gate stray" is outside a "gates { }" block, so it is ignored — move it inside "gates { ... }"',
+            '"job lost" is outside a "schedule { }" block, so it is ignored — move it inside "schedule { ... }"',
+        ]);
+        expect(v98.every((r) => r.level === "error")).toBe(true);
+    });
+    it("[N21] no shipped example trips V98", () => {
+        const dir = resolve(here, "../../../examples");
+        const hits = fs.readdirSync(dir).filter((f) => f.endsWith(".at"))
+            .filter((f) => validate(parse(fs.readFileSync(resolve(dir, f), "utf-8"))).some((r) => r.rule === "V98"));
+        expect(hits).toEqual([]);
+    });
+});
+describe("references resolve", () => {
+    it("[N18] an undeclared skill, MCP server or skill agent is a V99 warning", () => {
+        const src = fs.readFileSync(resolve(here, "fixtures/compile.at"), "utf-8")
+            .replace('    permissions: bypass\n', '    permissions: bypass\n    skills: [tone, toen]\n    mcp-servers: [search, serch]\n')
+            .replace('    description: "Write a brief"\n', '    description: "Write a brief"\n    agent: draftr\n');
+        const v99 = validate(parse(src)).filter((r) => r.rule === "V99");
+        expect(v99.map((r) => r.message.split(",")[0])).toEqual([
+            'Agent "auditor" uses skill "toen"',
+            'Agent "auditor" uses MCP server "serch"',
+            'Skill "brief" runs in agent "draftr"',
+        ]);
+        expect(v99.every((r) => r.level === "warning")).toBe(true);
+        // declared names and built-in agents pass
+        expect(validate(ast).filter((r) => r.rule === "V99")).toEqual([]);
+    });
+});
+describe("model ids are checked for the target", () => {
+    it("[N16] a model Claude Code does not have is omitted with a warning; aliases and claude-* ids pass", () => {
+        const src = fs.readFileSync(resolve(here, "fixtures/compile.at"), "utf-8")
+            .replace("  agent auditor {\n    model: sonnet", "  agent auditor {\n    model: gpt-4o")
+            .replace("  agent drafter {\n    model: sonnet", "  agent drafter {\n    model: claude-opus-5-5");
+        const warnings = [];
+        const warn = console.warn;
+        console.warn = (...a) => void warnings.push(a.join(" "));
+        let out;
+        try {
+            out = new Map(claudeCodeBinding.scaffold(parse(src)).map((f) => [f.path, f.content]));
+        }
+        finally {
+            console.warn = warn;
+        }
+        expect(out.get(".claude/agents/auditor/AGENT.md")).not.toMatch(/^model:/m);
+        expect(warnings.some((w) => w.includes('model "gpt-4o" is not a Claude Code model'))).toBe(true);
+        expect(out.get(".claude/agents/drafter/AGENT.md")).toMatch(/^model: claude-opus-5-5$/m);
+    });
+});
+//# sourceMappingURL=compile.test.js.map

package/dist/__tests__/e2e/compile.test.js.map

@@ -0,0 +1 @@
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package/dist/__tests__/e2e/roundtrip.test.d.ts

@@ -0,0 +1,16 @@
+/**
+ * End to end: a system built by hand comes into .at without losing anything.
+ *
+ * The rule (Nadav, 2026-10-29): AgentTopology gives the structure; bringing a
+ * hand-built system into it must never delete its internals. Before this,
+ * import then scaffold on this repo's own .claude left 0 of 72 files
+ * identical, 37 missing and the rest cut down (a 404-line SKILL.md came back
+ * as 9 lines), and the imported .at had 22 validation errors.
+ *
+ * The fixture (fixtures/handbuilt) holds what was lost: a flat and a folder
+ * agent, frontmatter the language has no field for, a comma-string tools
+ * list, a skill with scripts and references, a command, real permissions and
+ * a hand-written hook.
+ */
+export {};
+//# sourceMappingURL=roundtrip.test.d.ts.map

package/dist/__tests__/e2e/roundtrip.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"roundtrip.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/e2e/roundtrip.test.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG"}

package/dist/__tests__/e2e/roundtrip.test.js

@@ -0,0 +1,178 @@
+/**
+ * End to end: a system built by hand comes into .at without losing anything.
+ *
+ * The rule (Nadav, 2026-10-29): AgentTopology gives the structure; bringing a
+ * hand-built system into it must never delete its internals. Before this,
+ * import then scaffold on this repo's own .claude left 0 of 72 files
+ * identical, 37 missing and the rest cut down (a 404-line SKILL.md came back
+ * as 9 lines), and the imported .at had 22 validation errors.
+ *
+ * The fixture (fixtures/handbuilt) holds what was lost: a flat and a folder
+ * agent, frontmatter the language has no field for, a comma-string tools
+ * list, a skill with scripts and references, a command, real permissions and
+ * a hand-written hook.
+ */
+import { describe, it, expect, beforeEach, afterEach } from "vitest";
+import { execFileSync } from "node:child_process";
+import { createHash } from "node:crypto";
+import * as fs from "node:fs";
+import * as os from "node:os";
+import { resolve, dirname, join, relative } from "node:path";
+import { fileURLToPath } from "node:url";
+import { parse } from "../../parser/index.js";
+import { validate } from "../../parser/validator.js";
+import { claudeCodeBinding } from "../../bindings/claude-code.js";
+import { deepMergeSettingsJson } from "../../scaffold/merge.js";
+const here = dirname(fileURLToPath(import.meta.url));
+const root = resolve(here, "../../..");
+const CLI = resolve(root, "dist/cli/index.js");
+const HANDBUILT = resolve(here, "fixtures/handbuilt");
+function cli(args) {
+    try {
+        const out = execFileSync(process.execPath, [CLI, ...args], { encoding: "utf8", stdio: ["ignore", "pipe", "pipe"] });
+        return { out, code: 0 };
+    }
+    catch (err) {
+        const e = err;
+        return { out: `${e.stdout ?? ""}${e.stderr ?? ""}`, code: e.status ?? 1 };
+    }
+}
+/** path -> sha1 of every file under dir. */
+function snapshot(dir) {
+    const out = new Map();
+    const walk = (d) => {
+        for (const e of fs.readdirSync(d, { withFileTypes: true })) {
+            const p = join(d, e.name);
+            if (e.isDirectory())
+                walk(p);
+            else
+                out.set(relative(dir, p), createHash("sha1").update(fs.readFileSync(p)).digest("hex"));
+        }
+    };
+    walk(dir);
+    return out;
+}
+let tmp;
+let project;
+let at;
+beforeEach(() => {
+    tmp = fs.mkdtempSync(join(os.tmpdir(), "at-roundtrip-"));
+    project = join(tmp, "project");
+    fs.cpSync(HANDBUILT, project, { recursive: true });
+    at = join(tmp, "handbuilt.at");
+    expect(cli(["import", "--target", "claude-code", "--dir", project, "--name", "handbuilt", "--output", tmp]).code).toBe(0);
+});
+afterEach(() => {
+    fs.rmSync(tmp, { recursive: true, force: true });
+});
+describe("import then scaffold loses nothing (e2e)", () => {
+    it("[R3] the imported .at validates with no errors", () => {
+        const errors = validate(parse(fs.readFileSync(at, "utf-8"))).filter((r) => r.level === "error");
+        expect(errors.map((e) => `[${e.rule}] ${e.message}`)).toEqual([]);
+    });
+    it("[R1] every hand-built file is still there after scaffolding the import back", () => {
+        const before = snapshot(project);
+        expect(cli(["scaffold", at, "--target", "claude-code", "--output", project]).code).toBe(0);
+        const after = snapshot(project);
+        const missing = [...before.keys()].filter((p) => !after.has(p));
+        expect(missing).toEqual([]);
+    });
+    it("[R2] every hand-built file is byte-identical, settings.json included", () => {
+        const before = snapshot(project);
+        cli(["scaffold", at, "--target", "claude-code", "--output", project]);
+        const after = snapshot(project);
+        const changed = [...before].filter(([p, h]) => after.get(p) !== h).map(([p]) => p);
+        expect(changed).toEqual([]);
+    });
+    it("[A4] even --force leaves every hand-written file byte-identical", () => {
+        // Two layers protect a hand-built file: scaffold keeps files it did not
+        // create (G1), and file: means the binding never generates them at all.
+        // --force removes the first layer, so this proves the second on its own.
+        const before = snapshot(project);
+        expect(cli(["scaffold", at, "--target", "claude-code", "--output", project, "--force"]).code).toBe(0);
+        const after = snapshot(project);
+        const changed = [...before].filter(([p, h]) => after.get(p) !== h).map(([p]) => p);
+        expect(changed).toEqual([]);
+    });
+    it("[G12] a second scaffold of the import changes nothing", () => {
+        cli(["scaffold", at, "--target", "claude-code", "--output", project]);
+        expect(cli(["scaffold", at, "--target", "claude-code", "--output", project]).out).toMatch(/ 0 created, 0 updated/);
+    });
+    it("[R4] import keeps what the language has no field for, and the real permissions", () => {
+        const ast = parse(fs.readFileSync(at, "utf-8"));
+        const reviewer = ast.nodes.find((n) => n.id === "reviewer");
+        expect(reviewer.file).toBe(".claude/agents/reviewer.md");
+        expect(reviewer.extensions?.["claude-code"]).toMatchObject({
+            effort: "high",
+            color: "purple",
+        });
+        expect(reviewer.tools).toEqual(["Read", "Grep", "Glob"]);
+        expect(ast.settings.allow).toContain("Read");
+        expect(ast.settings.ask).toEqual(["Bash(git push:*)"]);
+    });
+    it("[A4] skills, commands and agents found on disk are marked file: and never generated", () => {
+        const ast = parse(fs.readFileSync(at, "utf-8"));
+        expect(ast.skills.find((s) => s.id === "story")?.file).toBe(".claude/skills/story/SKILL.md");
+        expect(ast.triggers.find((t) => t.name === "ship")?.file).toBe(".claude/commands/ship.md");
+        const paths = claudeCodeBinding.scaffold(ast).map((f) => f.path);
+        expect(paths.filter((p) => p.startsWith(".claude/skills/story/"))).toEqual([]);
+        expect(paths).not.toContain(".claude/commands/ship.md");
+        expect(paths).not.toContain(".claude/agents/reviewer/AGENT.md");
+        expect(paths).not.toContain(".claude/agents/writer/AGENT.md");
+    });
+    it("[G13] an agent's extensions never leak into project-wide settings", () => {
+        cli(["scaffold", at, "--target", "claude-code", "--output", project]);
+        const settings = JSON.parse(fs.readFileSync(join(project, ".claude/settings.json"), "utf-8"));
+        expect(settings.effort).toBeUndefined();
+        expect(settings.color).toBeUndefined();
+    });
+    it("[G14] an imported hook and its compiled form are one hook, not two", () => {
+        const existing = JSON.stringify({
+            hooks: { PreToolUse: [{ matcher: "Bash", hooks: [{ type: "command", command: "bash .claude/hooks/guard.sh" }] }] },
+        });
+        const generated = JSON.stringify({
+            hooks: { PreToolUse: [{ matcher: "Bash", hooks: [{ type: "command", command: 'bash "$CLAUDE_PROJECT_DIR/.claude/hooks/guard.sh"' }] }] },
+        });
+        const merged = JSON.parse(deepMergeSettingsJson(existing, generated));
+        expect(merged.hooks.PreToolUse).toHaveLength(1);
+    });
+});
+describe("an on-demand agent needs no flow path", () => {
+    it("[G17] V11 skips a reader or writer with invocation: manual", () => {
+        const src = fs.readFileSync(at, "utf-8")
+            .replace("agent reviewer {", 'agent reviewer {\n    reads: ["drafts/"]')
+            .replace("agent writer {", 'agent writer {\n    writes: ["drafts/"]');
+        expect(validate(parse(src)).filter((r) => r.rule === "V11")).toEqual([]);
+    });
+});
+describe("file: is checked, and scaffold's two overrides are separate", () => {
+    it("[G15] V97 refuses a file: outside the project", () => {
+        const src = fs.readFileSync(at, "utf-8").replace("file: .claude/agents/reviewer.md", 'file: "../elsewhere/reviewer.md"');
+        const errors = validate(parse(src)).filter((r) => r.rule === "V97");
+        expect(errors).toHaveLength(1);
+    });
+    it("[F3] --allow-invalid compiles despite errors; --force alone does not", () => {
+        fs.writeFileSync(at, fs.readFileSync(at, "utf-8").replace("file: .claude/agents/reviewer.md", 'file: "../x.md"'));
+        const forced = cli(["scaffold", at, "--target", "claude-code", "--output", project, "--force"]);
+        expect(forced.code).toBe(1);
+        expect(forced.out).toContain("Nothing was written");
+        const allowed = cli(["scaffold", at, "--target", "claude-code", "--output", project, "--allow-invalid"]);
+        expect(allowed.code).toBe(0);
+        // --allow-invalid does not overwrite what scaffold did not create.
+        expect(fs.readFileSync(join(project, ".claude/hooks/guard.sh"), "utf-8")).toContain("Blocks a push");
+    });
+    it("[C5] a hook's own script is never overwritten, even with --force, and not reported as a conflict", () => {
+        const { out } = cli(["scaffold", at, "--target", "claude-code", "--output", project, "--force"]);
+        expect(fs.readFileSync(join(project, ".claude/hooks/guard.sh"), "utf-8")).toContain("Blocks a push");
+        expect(out).not.toContain("guard.sh (exists");
+        const manifest = JSON.parse(fs.readFileSync(join(project, ".claude/.scaffold-manifest.json"), "utf-8"));
+        expect(manifest.files[".claude/hooks/guard.sh"]).toBeUndefined();
+    });
+    it("[G16] scaffold names a hand-written file the project lacks", () => {
+        fs.rmSync(join(project, ".claude/commands/ship.md"));
+        const { out } = cli(["scaffold", at, "--target", "claude-code", "--output", project, "--dry-run"]);
+        expect(out).toContain(".claude/commands/ship.md");
+        expect(out).toMatch(/hand-written file\(s\) named by file: are not in/);
+    });
+});
+//# sourceMappingURL=roundtrip.test.js.map

package/dist/__tests__/e2e/roundtrip.test.js.map

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package/dist/__tests__/e2e/scaffold-owns.test.d.ts

@@ -0,0 +1,10 @@
+/**
+ * End to end: scaffold only changes what it owns.
+ *
+ * Each test runs the built CLI as a user would, against a temporary project
+ * that holds the hazards a real harness hit on 2026-10-28. Test names carry
+ * the guarantee id from spec/testing.md; spec-testing-sync.test.ts fails if a
+ * guarantee there has no test here or elsewhere.
+ */
+export {};
+//# sourceMappingURL=scaffold-owns.test.d.ts.map

package/dist/__tests__/e2e/scaffold-owns.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"scaffold-owns.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/e2e/scaffold-owns.test.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG"}