agentic-qe 3.9.29 → 3.9.31

package/dist/cli/chunks/{orchestrator-ZPVU3M4M.js → orchestrator-YVTSM6QW.js}

@@ -1,28 +1,28 @@
-import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.29");process.exit(0)}
-import{a as Ie}from"./chunk-G7LVJXZR.js";import{c as De}from"./chunk-WQX2Q42U.js";import{a as ne,b as ue,c as be,d as Ce,e as Pe,f as Se,g as Ee,h as Re,i as xe,j as _e,k as $e}from"./chunk-WYSM5565.js";import"./chunk-ZXWHKLZN.js";import{a as Ae}from"./chunk-HEUAPPKE.js";import"./chunk-RBHWBTKA.js";import"./chunk-VKJLHKLY.js";import"./chunk-667A24A4.js";import"./chunk-YDBBXRH7.js";import"./chunk-6ZJROHI3.js";import"./chunk-LPSIKIE2.js";import{b as x,d as te}from"./chunk-CZEQFAKE.js";import{a as S,b as we,c as ee}from"./chunk-LIEKDXTS.js";import"./chunk-DCZV4QTP.js";import{a as _,b as de}from"./chunk-ZZAZQKOA.js";import"./chunk-GHBQVPJT.js";import"./chunk-KQYKPEY6.js";import"./chunk-PYAITX6B.js";import"./chunk-N5SS5YIS.js";import"./chunk-3E4VPGNW.js";import"./chunk-REFFJUYT.js";import"./chunk-BZ4OMPVJ.js";import"./chunk-IX5LUHCN.js";import{a as ce}from"./chunk-YCK464TF.js";ee();ee();var y=class{requiresPhases;requiresEnhancements;async shouldRun(e){return!0}async execute(e){let t=Date.now();try{return{success:!0,data:await this.run(e),durationMs:Date.now()-t,message:`${this.description} completed`}}catch(s){return{success:!1,error:we(s),durationMs:Date.now()-t,message:`${this.description} failed: ${S(s)}`}}}checkDependencies(e){if(!this.requiresPhases?.length)return!0;for(let t of this.requiresPhases)if(!e.results.get(t)?.success)return e.services.warn(`Phase ${this.name} requires ${t} which has not completed`),!1;return!0}checkEnhancements(e){if(!this.requiresEnhancements?.length)return!0;for(let t of this.requiresEnhancements)if(!(t==="claudeFlow"?e.enhancements.claudeFlow:t==="ruvector"?e.enhancements.ruvector:!1))return e.services.warn(`Phase ${this.name} requires ${t} which is not available`),!1;return!0}};te();de();import{existsSync as q}from"fs";import{join as T}from"path";var N=class extends y{name="detection";description="Detect existing installations";order=10;critical=!0;async run(e){let{projectRoot:t}=e,s=await this.detectV2Installation(t),n=q(T(t,".agentic-qe","config.yaml")),o=s.version?.startsWith("3."),r=s.detected,i=n||o||!1,c=!r&&!i;return e.v2Detection=s,{v2Detected:r,v3Detected:i,freshInstall:c,v2Detection:s}}async detectV2Installation(e){let t=T(e,".agentic-qe","memory.db"),s=T(e,".agentic-qe","config"),n=T(e,".claude","agents"),o=T(e,".agentic-qe","config","learning.json"),r=q(t),i=q(s),c=q(n),d=q(o),u=q(T(e,".agentic-qe","config.yaml")),m,p=!1;return r&&(m=this.readVersionFromDb(t),m?p=m.startsWith("3."):m="2.x.x"),{detected:!p&&r&&(!m?.startsWith("3.")||d&&!u),memoryDbPath:r?t:void 0,configPath:i?s:void 0,agentsPath:c?n:void 0,hasMemoryDb:r,hasConfig:i,hasAgents:c,version:m}}readVersionFromDb(e){try{let t=_(e,{readonly:!0,fileMustExist:!0});try{if(!t.prepare(`
+import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.31");process.exit(0)}
+import{a as Ie}from"./chunk-XE4YKDIM.js";import{c as De}from"./chunk-FOAWHNOP.js";import{a as ne,b as ue,c as we,d as Ce,e as Pe,f as Se,g as Ee,h as Re,i as xe,j as _e,k as $e}from"./chunk-YQJBE6NX.js";import"./chunk-W7XVEWKQ.js";import{a as Ae}from"./chunk-DUF733Z7.js";import"./chunk-TVHWI77X.js";import"./chunk-EAIPJSKH.js";import"./chunk-7MXQV7RB.js";import"./chunk-X2FLWV5C.js";import{b as x,d as te}from"./chunk-WB6TI6Q3.js";import"./chunk-5Z6PYYWK.js";import"./chunk-NZQYNUGM.js";import{a as S,b as ke,c as ee}from"./chunk-K6MFAVXK.js";import"./chunk-RBDAHW2M.js";import{a as _,b as de}from"./chunk-CFLA2GBS.js";import"./chunk-EJXRBAQF.js";import"./chunk-N6SIKSCO.js";import"./chunk-5WWQLPB4.js";import"./chunk-7OVVBBOZ.js";import"./chunk-G2U7Q6V6.js";import"./chunk-CUSLB7MB.js";import"./chunk-DMF4Z2M6.js";import"./chunk-AKFRM4IO.js";import{a as ce}from"./chunk-BMS7WFDB.js";ee();ee();var y=class{requiresPhases;requiresEnhancements;async shouldRun(e){return!0}async execute(e){let t=Date.now();try{return{success:!0,data:await this.run(e),durationMs:Date.now()-t,message:`${this.description} completed`}}catch(s){return{success:!1,error:ke(s),durationMs:Date.now()-t,message:`${this.description} failed: ${S(s)}`}}}checkDependencies(e){if(!this.requiresPhases?.length)return!0;for(let t of this.requiresPhases)if(!e.results.get(t)?.success)return e.services.warn(`Phase ${this.name} requires ${t} which has not completed`),!1;return!0}checkEnhancements(e){if(!this.requiresEnhancements?.length)return!0;for(let t of this.requiresEnhancements)if(!(t==="claudeFlow"?e.enhancements.claudeFlow:t==="ruvector"?e.enhancements.ruvector:!1))return e.services.warn(`Phase ${this.name} requires ${t} which is not available`),!1;return!0}};te();de();import{existsSync as j}from"fs";import{join as T}from"path";var N=class extends y{name="detection";description="Detect existing installations";order=10;critical=!0;async run(e){let{projectRoot:t}=e,s=await this.detectV2Installation(t),n=j(T(t,".agentic-qe","config.yaml")),o=s.version?.startsWith("3."),r=s.detected,i=n||o||!1,c=!r&&!i;return e.v2Detection=s,{v2Detected:r,v3Detected:i,freshInstall:c,v2Detection:s}}async detectV2Installation(e){let t=T(e,".agentic-qe","memory.db"),s=T(e,".agentic-qe","config"),n=T(e,".claude","agents"),o=T(e,".agentic-qe","config","learning.json"),r=j(t),i=j(s),c=j(n),d=j(o),u=j(T(e,".agentic-qe","config.yaml")),m,p=!1;return r&&(m=this.readVersionFromDb(t),m?p=m.startsWith("3."):m="2.x.x"),{detected:!p&&r&&(!m?.startsWith("3.")||d&&!u),memoryDbPath:r?t:void 0,configPath:i?s:void 0,agentsPath:c?n:void 0,hasMemoryDb:r,hasConfig:i,hasAgents:c,version:m}}readVersionFromDb(e){try{let t=_(e,{readonly:!0,fileMustExist:!0});try{if(!t.prepare(`
           SELECT name FROM sqlite_master
           WHERE type='table' AND name='kv_store'
         `).get()){t.close();return}let n=t.prepare(`
           SELECT value FROM kv_store
           WHERE key = 'aqe_version' AND namespace = '_system'
-        `).get();return t.close(),n?x(n.value):void 0}catch{t.close();return}}catch{return}}};var Q=class extends y{name="analysis";description="Analyze project structure";order=20;critical=!0;requiresPhases=["detection"];async run(e){let s=await be(e.projectRoot).analyze();return e.analysis=s,e.services.log(`  Project: ${s.projectName}`),e.services.log(`  Languages: ${s.languages.map(n=>n.name).join(", ")}`),e.services.log(`  Frameworks: ${s.frameworks.map(n=>n.name).join(", ")}`),s}};var L=class extends y{name="configuration";description="Generate configuration";order=30;critical=!0;requiresPhases=["analysis"];async run(e){if(!e.analysis)throw new Error("Analysis phase must complete before configuration");let s=Ce({minimal:e.options.minimal}).recommend(e.analysis);return s=this.applyOptions(s,e),e.config=s,e.services.log(`  Version: ${s.version}`),e.services.log(`  Learning: ${s.learning.enabled?"enabled":"disabled"}`),e.services.log(`  Workers: ${s.workers.enabled.length}`),s}applyOptions(e,t){let{options:s}=t;return s.minimal&&(e.skills.install=!1,e.learning.pretrainedPatterns=!1,e.workers.enabled=[],e.workers.daemonAutoStart=!1),s.skipPatterns&&(e.learning.pretrainedPatterns=!1),s.wizardAnswers&&(e=this.applyWizardAnswers(e,s.wizardAnswers)),e}applyWizardAnswers(e,t){switch(t["project-type"]&&t["project-type"]!=="auto"&&(e.project.type=t["project-type"]),t["learning-mode"]){case"full":e.learning.enabled=!0,e.learning.embeddingModel="transformer";break;case"basic":e.learning.enabled=!0,e.learning.embeddingModel="hash";break;case"disabled":e.learning.enabled=!1;break}return t["load-patterns"]===!1&&(e.learning.pretrainedPatterns=!1),t.hooks===!1&&(e.hooks.claudeCode=!1),t.workers===!1&&(e.workers.daemonAutoStart=!1),t.skills===!1&&(e.skills.install=!1),e}};import{existsSync as V,mkdirSync as pe}from"fs";import{join as B}from"path";var H=class extends y{name="database";description="Initialize persistence database";order=40;critical=!0;requiresPhases=["configuration"];async run(e){let{projectRoot:t}=e,s=B(t,"vectors.db");V(s)&&e.services.log(`  \u26A0 Stale vectors.db detected at ${s}
+        `).get();return t.close(),n?x(n.value):void 0}catch{t.close();return}}catch{return}}};var Q=class extends y{name="analysis";description="Analyze project structure";order=20;critical=!0;requiresPhases=["detection"];async run(e){let s=await we(e.projectRoot).analyze();return e.analysis=s,e.services.log(`  Project: ${s.projectName}`),e.services.log(`  Languages: ${s.languages.map(n=>n.name).join(", ")}`),e.services.log(`  Frameworks: ${s.frameworks.map(n=>n.name).join(", ")}`),s}};var L=class extends y{name="configuration";description="Generate configuration";order=30;critical=!0;requiresPhases=["analysis"];async run(e){if(!e.analysis)throw new Error("Analysis phase must complete before configuration");let s=Ce({minimal:e.options.minimal}).recommend(e.analysis);return s=this.applyOptions(s,e),e.config=s,e.services.log(`  Version: ${s.version}`),e.services.log(`  Learning: ${s.learning.enabled?"enabled":"disabled"}`),e.services.log(`  Workers: ${s.workers.enabled.length}`),s}applyOptions(e,t){let{options:s}=t;return s.minimal&&(e.skills.install=!1,e.learning.pretrainedPatterns=!1,e.workers.enabled=[],e.workers.daemonAutoStart=!1),s.skipPatterns&&(e.learning.pretrainedPatterns=!1),s.wizardAnswers&&(e=this.applyWizardAnswers(e,s.wizardAnswers)),e}applyWizardAnswers(e,t){switch(t["project-type"]&&t["project-type"]!=="auto"&&(e.project.type=t["project-type"]),t["learning-mode"]){case"full":e.learning.enabled=!0,e.learning.embeddingModel="transformer";break;case"basic":e.learning.enabled=!0,e.learning.embeddingModel="hash";break;case"disabled":e.learning.enabled=!1;break}return t["load-patterns"]===!1&&(e.learning.pretrainedPatterns=!1),t.hooks===!1&&(e.hooks.claudeCode=!1),t.workers===!1&&(e.workers.daemonAutoStart=!1),t.skills===!1&&(e.skills.install=!1),e}};import{existsSync as B,mkdirSync as pe}from"fs";import{join as V}from"path";var H=class extends y{name="database";description="Initialize persistence database";order=40;critical=!0;requiresPhases=["configuration"];async run(e){let{projectRoot:t}=e,s=V(t,"vectors.db");B(s)&&e.services.log(`  \u26A0 Stale vectors.db detected at ${s}
     This file is left over from @ruvector/router (pre-v3.9.6).
     It is no longer read or written by AQE. Safe to delete:
-      rm "${s}"`);let n=B(t,".agentic-qe");V(n)||pe(n,{recursive:!0});let o=B(n,"workers");V(o)||pe(o,{recursive:!0});let r=B(n,"data");V(r)||pe(r,{recursive:!0});let i=B(n,"memory.db"),c=!V(i);try{let{initializeUnifiedMemory:d,resetUnifiedMemory:u}=await import("./unified-memory-VSSMXGHP.js"),m=await d({dbPath:i,walMode:!0,busyTimeout:5e3}),h=m.getStats().tables.map(A=>A.name);await m.kvSet("_init_marker",{initialized:new Date().toISOString(),projectRoot:t,version:ne()},"_system");let w=m.getDatabase().prepare("SELECT version FROM schema_version WHERE id = 1").get()?.version??0;return u(),e.services.log(`  Database: ${i}`),e.services.log(`  Schema version: v${w}`),e.services.log(`  Tables: ${h.length} (v3 full schema)`),{dbPath:i,created:c,tablesCreated:h,schemaVersion:w}}catch(d){throw new Error(`SQLite persistence initialization FAILED: ${d}
+      rm "${s}"`);let n=V(t,".agentic-qe");B(n)||pe(n,{recursive:!0});let o=V(n,"workers");B(o)||pe(o,{recursive:!0});let r=V(n,"data");B(r)||pe(r,{recursive:!0});let i=V(n,"memory.db"),c=!B(i);try{let{initializeUnifiedMemory:d,resetUnifiedMemory:u}=await import("./unified-memory-YDKXKW3D.js"),m=await d({dbPath:i,walMode:!0,busyTimeout:5e3}),h=m.getStats().tables.map(A=>A.name);await m.kvSet("_init_marker",{initialized:new Date().toISOString(),projectRoot:t,version:ne()},"_system");let k=m.getDatabase().prepare("SELECT version FROM schema_version WHERE id = 1").get()?.version??0;return u(),e.services.log(`  Database: ${i}`),e.services.log(`  Schema version: v${k}`),e.services.log(`  Tables: ${h.length} (v3 full schema)`),{dbPath:i,created:c,tablesCreated:h,schemaVersion:k}}catch(d){throw new Error(`SQLite persistence initialization FAILED: ${d}
 Database path: ${i}
-Ensure the directory is writable and has sufficient disk space.`)}}};import{existsSync as se,mkdirSync as me,writeFileSync as je}from"fs";import{join as $}from"path";var W=class extends y{name="learning";description="Initialize learning system";order=50;critical=!1;requiresPhases=["database","configuration"];async shouldRun(e){return e.config?.learning?.enabled??!0}async run(e){let t=e.config,{projectRoot:s,options:n}=e;if(!t.learning.enabled)return{enabled:!1,dataDir:"",hnswDir:"",patternsLoaded:0};let o=$(s,".agentic-qe","data");se(o)||me(o,{recursive:!0});let r=$(o,"hnsw");se(r)||me(r,{recursive:!0});let i=$(o,"learning-config.json"),c={embeddingModel:t.learning.embeddingModel,hnswConfig:t.learning.hnswConfig,qualityThreshold:t.learning.qualityThreshold,promotionThreshold:t.learning.promotionThreshold,databasePath:$(o,"memory.db"),hnswIndexPath:$(r,"index.bin"),initialized:new Date().toISOString()};je(i,JSON.stringify(c,null,2),"utf-8");let d=0;return t.learning.pretrainedPatterns&&!n.skipPatterns&&(d=await this.loadPretrainedPatterns(o,e)),e.services.log(`  Data dir: ${o}`),e.services.log(`  HNSW dir: ${r}`),e.services.log(`  Patterns loaded: ${d}`),{enabled:!0,dataDir:o,hnswDir:r,patternsLoaded:d}}async loadPretrainedPatterns(e,t){try{let s=$(e,"patterns");se(s)||me(s,{recursive:!0});let n=$(s,"index.json");return se(n)||je(n,JSON.stringify({version:ne(),domains:[],loadedAt:new Date().toISOString()},null,2),"utf-8"),0}catch(s){return t.services.warn(`Could not load pre-trained patterns: ${s}`),0}}};te();de();import{existsSync as Je,statSync as Xe}from"fs";import{join as re}from"path";var qe=3e4,Te=18e4,Me=["**/node_modules/**","**/dist/**","**/build/**","**/out/**","**/coverage/**","**/.agentic-qe/**","**/.git/**","**/.next/**","**/.nuxt/**","**/.output/**","**/__pycache__/**","**/.pytest_cache/**","**/target/**","**/vendor/**","**/.venv/**","**/venv/**","**/.tox/**","**/*.min.js","**/*.min.css","**/*.bundle.js","**/*.map","**/package-lock.json","**/yarn.lock","**/pnpm-lock.yaml","**/Pipfile.lock","**/poetry.lock","**/.env","**/.env.*"],G=class extends y{name="code-intelligence";description="Code intelligence pre-scan";order=60;critical=!1;requiresPhases=["database"];async shouldRun(e){let t=process.env.AQE_SKIP_CODE_INDEX;return t==="1"||t==="true"?(e.services.log("  Code intelligence skipped (AQE_SKIP_CODE_INDEX=1)"),e.services.log("  Run `aqe code index` later to build the KG on demand."),!1):e.options.skipCodeIndex?(e.services.log("  Code intelligence skipped (--skip-code-index)"),e.services.log("  Run `aqe code index` later to build the KG on demand."),!1):!0}async run(e){let{projectRoot:t}=e,s=re(t,".agentic-qe","memory.db");if(!Je(s))return e.services.log("  Building knowledge graph..."),await this.runCodeIntelligenceScan(t,e,!1);let n=_(s);try{if(!this.checkCodeIntelligenceIndex(n))return n.close(),e.services.log("  Building knowledge graph..."),await this.runCodeIntelligenceScan(t,e,!1);let r=this.getLastIndexedAt(n);if(!r){let d=this.getKGEntryCount(n);return n.close(),e.services.log(`  Using existing index (${d} entries)`),{status:"existing",entries:d}}let i=this.getKGEntryCount(n);n.close();let c=await this.findChangedFiles(t,r);return c.length===0?(e.services.log(`  Index up to date (${i} entries)`),{status:"existing",entries:i}):(e.services.log(`  Delta scan: ${c.length} files changed since last index...`),await this.runCodeIntelligenceScan(t,e,!0,c))}catch(o){try{n.close()}catch{}throw o}}checkCodeIntelligenceIndex(e){try{return e.prepare(`
+Ensure the directory is writable and has sufficient disk space.`)}}};import{existsSync as se,mkdirSync as me,writeFileSync as qe}from"fs";import{join as $}from"path";var W=class extends y{name="learning";description="Initialize learning system";order=50;critical=!1;requiresPhases=["database","configuration"];async shouldRun(e){return e.config?.learning?.enabled??!0}async run(e){let t=e.config,{projectRoot:s,options:n}=e;if(!t.learning.enabled)return{enabled:!1,dataDir:"",hnswDir:"",patternsLoaded:0};let o=$(s,".agentic-qe","data");se(o)||me(o,{recursive:!0});let r=$(o,"hnsw");se(r)||me(r,{recursive:!0});let i=$(o,"learning-config.json"),c={embeddingModel:t.learning.embeddingModel,hnswConfig:t.learning.hnswConfig,qualityThreshold:t.learning.qualityThreshold,promotionThreshold:t.learning.promotionThreshold,databasePath:$(o,"memory.db"),hnswIndexPath:$(r,"index.bin"),initialized:new Date().toISOString()};qe(i,JSON.stringify(c,null,2),"utf-8");let d=0;return t.learning.pretrainedPatterns&&!n.skipPatterns&&(d=await this.loadPretrainedPatterns(o,e)),e.services.log(`  Data dir: ${o}`),e.services.log(`  HNSW dir: ${r}`),e.services.log(`  Patterns loaded: ${d}`),{enabled:!0,dataDir:o,hnswDir:r,patternsLoaded:d}}async loadPretrainedPatterns(e,t){try{let s=$(e,"patterns");se(s)||me(s,{recursive:!0});let n=$(s,"index.json");return se(n)||qe(n,JSON.stringify({version:ne(),domains:[],loadedAt:new Date().toISOString()},null,2),"utf-8"),0}catch(s){return t.services.warn(`Could not load pre-trained patterns: ${s}`),0}}};te();de();import{existsSync as Je,statSync as Xe}from"fs";import{join as re}from"path";var je=3e4,Te=18e4,Me=["**/node_modules/**","**/dist/**","**/build/**","**/out/**","**/coverage/**","**/.agentic-qe/**","**/.git/**","**/.next/**","**/.nuxt/**","**/.output/**","**/__pycache__/**","**/.pytest_cache/**","**/target/**","**/vendor/**","**/.venv/**","**/venv/**","**/.tox/**","**/*.min.js","**/*.min.css","**/*.bundle.js","**/*.map","**/package-lock.json","**/yarn.lock","**/pnpm-lock.yaml","**/Pipfile.lock","**/poetry.lock","**/.env","**/.env.*"],U=class extends y{name="code-intelligence";description="Code intelligence pre-scan";order=60;critical=!1;requiresPhases=["database"];async shouldRun(e){let t=process.env.AQE_SKIP_CODE_INDEX;return t==="1"||t==="true"?(e.services.log("  Code intelligence skipped (AQE_SKIP_CODE_INDEX=1)"),e.services.log("  Run `aqe code index` later to build the KG on demand."),!1):e.options.skipCodeIndex?(e.services.log("  Code intelligence skipped (--skip-code-index)"),e.services.log("  Run `aqe code index` later to build the KG on demand."),!1):!0}async run(e){let{projectRoot:t}=e,s=re(t,".agentic-qe","memory.db");if(!Je(s))return e.services.log("  Building knowledge graph..."),await this.runCodeIntelligenceScan(t,e,!1);let n=_(s);try{if(!this.checkCodeIntelligenceIndex(n))return n.close(),e.services.log("  Building knowledge graph..."),await this.runCodeIntelligenceScan(t,e,!1);let r=this.getLastIndexedAt(n);if(!r){let d=this.getKGEntryCount(n);return n.close(),e.services.log(`  Using existing index (${d} entries)`),{status:"existing",entries:d}}let i=this.getKGEntryCount(n);n.close();let c=await this.findChangedFiles(t,r);return c.length===0?(e.services.log(`  Index up to date (${i} entries)`),{status:"existing",entries:i}):(e.services.log(`  Delta scan: ${c.length} files changed since last index...`),await this.runCodeIntelligenceScan(t,e,!0,c))}catch(o){try{n.close()}catch{}throw o}}checkCodeIntelligenceIndex(e){try{return e.prepare(`
         SELECT COUNT(*) as count FROM kv_store
         WHERE namespace = 'code-intelligence:kg'
       `).get().count>0}catch{return!1}}getKGEntryCount(e){try{return e.prepare(`
         SELECT COUNT(*) as count FROM kv_store
         WHERE namespace LIKE 'code-intelligence:kg%'
-      `).get().count}catch{return 0}}async runCodeIntelligenceScan(e,t,s,n){let{KnowledgeGraphService:o}=await import("./knowledge-graph-RLCAQW6I.js"),r=re(e,".agentic-qe","memory.db"),i={type:"sqlite",sqlite:{path:r,walMode:!0}},{backend:c}=await Ie(i,!0),d=new o(c,{namespace:"code-intelligence:kg",enableVectorEmbeddings:!0});try{let u;n?u=n:u=(await(await import("fast-glob")).default(["**/*.ts","**/*.tsx","**/*.js","**/*.jsx","**/*.py"],{cwd:e,ignore:Me})).map(f=>re(e,f)),t.services.log(`  Scanning ${u.length} source files...`);let m=await this.runBoundedScan(d,u,s,t);if(m.status==="timeout")return t.services.warn(`  \u26A0 Code intelligence pre-scan exceeded ${Te/1e3}s phase cap. Indexed ${m.entries} entries before timeout. Last file: ${m.timeoutFile??"(unknown)"}. Init is continuing \u2014 re-run 'aqe code index' later, or report this file to https://github.com/proffesor-for-testing/agentic-qe/issues.`),m;if(m.status==="indexed"){let p=s?"Delta indexed":"Indexed";t.services.log(`  ${p} ${m.entries} entries to ${r}`),await this.buildHypergraph(r,u,t)}return m}finally{try{d.destroy()}catch{}try{await c.dispose()}catch{}}}async runBoundedScan(e,t,s,n){let o=0,r=0,i=0,c="",d=Date.now(),u=!1;s||await e.clear();let m=n.projectRoot,p=f=>f.startsWith(m)?f.slice(m.length+1):f;for(let f of t){if(Date.now()-d>Te){u=!0;break}c=f,n.services.log(`  [${i+1}/${t.length}] ${p(f)}`);try{let v=await this.withTimeout(e.index({paths:[f],incremental:!0,includeTests:!0}),qe,f);v.success&&(o+=v.value.nodesCreated,r+=v.value.edgesCreated)}catch(v){let w=v instanceof Error?v.message:String(v);w.startsWith("AQE_PER_FILE_TIMEOUT")?n.services.warn(`  \u26A0 Skipped ${p(f)} \u2014 indexing exceeded ${qe/1e3}s`):n.services.warn(`  \u26A0 Failed to index ${p(f)}: ${w}`)}i++}let h=o+r;return u?{status:"timeout",entries:h,timeoutFile:c}:{status:"indexed",entries:h}}withTimeout(e,t,s){return new Promise((n,o)=>{let r=setTimeout(()=>{o(new Error(`AQE_PER_FILE_TIMEOUT: ${s}`))},t);typeof r.unref=="function"&&r.unref(),e.then(i=>{clearTimeout(r),n(i)},i=>{clearTimeout(r),o(i)})})}async buildHypergraph(e,t,s){try{let{extractCodeIndex:n}=await import("./code-index-extractor-NP7JW32L.js"),{createHypergraphEngine:o}=await import("./hypergraph-engine-IRTPRX6K.js"),r=_(e),i=await o({db:r,maxTraversalDepth:10,maxQueryResults:1e3,enableVectorSearch:!1}),c=await n(t),d=await i.buildFromIndexResult(c);r.close(),d.nodesCreated+d.edgesCreated>0&&s.services.log(`  Hypergraph: ${d.nodesCreated} nodes, ${d.edgesCreated} edges`)}catch(n){s.services.warn?.(`  Hypergraph build skipped: ${n}`)}}getLastIndexedAt(e){try{let t=e.prepare(`
+      `).get().count}catch{return 0}}async runCodeIntelligenceScan(e,t,s,n){let{KnowledgeGraphService:o}=await import("./knowledge-graph-V3DX6ZCX.js"),r=re(e,".agentic-qe","memory.db"),i={type:"sqlite",sqlite:{path:r,walMode:!0}},{backend:c}=await Ie(i,!0),d=new o(c,{namespace:"code-intelligence:kg",enableVectorEmbeddings:!0});try{let u;n?u=n:u=(await(await import("fast-glob")).default(["**/*.ts","**/*.tsx","**/*.js","**/*.jsx","**/*.py"],{cwd:e,ignore:Me})).map(f=>re(e,f)),t.services.log(`  Scanning ${u.length} source files...`);let m=await this.runBoundedScan(d,u,s,t);if(m.status==="timeout")return t.services.warn(`  \u26A0 Code intelligence pre-scan exceeded ${Te/1e3}s phase cap. Indexed ${m.entries} entries before timeout. Last file: ${m.timeoutFile??"(unknown)"}. Init is continuing \u2014 re-run 'aqe code index' later, or report this file to https://github.com/proffesor-for-testing/agentic-qe/issues.`),m;if(m.status==="indexed"){let p=s?"Delta indexed":"Indexed";t.services.log(`  ${p} ${m.entries} entries to ${r}`),await this.buildHypergraph(r,u,t)}return m}finally{try{d.destroy()}catch{}try{await c.dispose()}catch{}}}async runBoundedScan(e,t,s,n){let o=0,r=0,i=0,c="",d=Date.now(),u=!1;s||await e.clear();let m=n.projectRoot,p=f=>f.startsWith(m)?f.slice(m.length+1):f;for(let f of t){if(Date.now()-d>Te){u=!0;break}c=f,n.services.log(`  [${i+1}/${t.length}] ${p(f)}`);try{let v=await this.withTimeout(e.index({paths:[f],incremental:!0,includeTests:!0}),je,f);v.success&&(o+=v.value.nodesCreated,r+=v.value.edgesCreated)}catch(v){let k=v instanceof Error?v.message:String(v);k.startsWith("AQE_PER_FILE_TIMEOUT")?n.services.warn(`  \u26A0 Skipped ${p(f)} \u2014 indexing exceeded ${je/1e3}s`):n.services.warn(`  \u26A0 Failed to index ${p(f)}: ${k}`)}i++}let h=o+r;return u?{status:"timeout",entries:h,timeoutFile:c}:{status:"indexed",entries:h}}withTimeout(e,t,s){return new Promise((n,o)=>{let r=setTimeout(()=>{o(new Error(`AQE_PER_FILE_TIMEOUT: ${s}`))},t);typeof r.unref=="function"&&r.unref(),e.then(i=>{clearTimeout(r),n(i)},i=>{clearTimeout(r),o(i)})})}async buildHypergraph(e,t,s){try{let{extractCodeIndex:n}=await import("./code-index-extractor-4ABP5WCP.js"),{createHypergraphEngine:o}=await import("./hypergraph-engine-JOQ6TERZ.js"),r=_(e),i=await o({db:r,maxTraversalDepth:10,maxQueryResults:1e3,enableVectorSearch:!1}),c=await n(t),d=await i.buildFromIndexResult(c);r.close(),d.nodesCreated+d.edgesCreated>0&&s.services.log(`  Hypergraph: ${d.nodesCreated} nodes, ${d.edgesCreated} edges`)}catch(n){s.services.warn?.(`  Hypergraph build skipped: ${n}`)}}getLastIndexedAt(e){try{let t=e.prepare(`
         SELECT value FROM kv_store
         WHERE namespace = 'code-intelligence:kg'
           AND key = 'metadata:index'
-      `).get();if(!t)return null;let s=x(t.value);if(!s.indexedAt)return null;let n=new Date(s.indexedAt);return isNaN(n.getTime())?null:n}catch{return null}}async findChangedFiles(e,t){let n=await(await import("fast-glob")).default(["**/*.ts","**/*.tsx","**/*.js","**/*.jsx","**/*.py"],{cwd:e,ignore:Me}),o=t.getTime(),r=[];for(let i of n){let c=re(e,i);try{Xe(c).mtimeMs>o&&r.push(c)}catch{}}return r}};te();import{existsSync as P,mkdirSync as oe,readFileSync as Oe,writeFileSync as M}from"fs";import{join as b}from"path";var U=class extends y{name="hooks";description="Configure Claude Code hooks";order=70;critical=!1;requiresPhases=["configuration"];async shouldRun(e){return e.config?.hooks?.claudeCode??!0}async run(e){let t=e.config,{projectRoot:s}=e;if(!t.hooks.claudeCode)return{configured:!1,settingsPath:"",hookTypes:[],existingAqeDetected:!1};let n=b(s,".claude");P(n)||oe(n,{recursive:!0});let o=b(n,"hooks");P(o)||oe(o,{recursive:!0});let r=b(n,"settings.json"),i={};if(P(r))try{let v=Oe(r,"utf-8");i=x(v)}catch{i={}}let c=this.generateHooksConfig(t,s),d=Object.keys(c),u=i.hooks||{},m=this.hasExistingAqeHooks(u);m&&e.services.log("  Detected existing AQE hooks \u2014 replacing with updated config"),i.hooks=Se(u,c);let p=i.env||{};i.env={...p,...Ee(t)};let h=Re(t,s);for(let[v,w]of Object.entries(h))if(v==="_aqePermissions"){let A=i.permissions||{},le=A.allow||[],I=w,g=[...new Set([...le,...I])];i.permissions={...A,allow:g}}else i[v]=w;let f=i.enabledMcpjsonServers||[];f=f.filter(v=>v!=="aqe"),f.includes("agentic-qe")||f.push("agentic-qe"),i.enabledMcpjsonServers=f,M(r,JSON.stringify(i,null,2),"utf-8"),this.writeHooksReadme(o,d),this.installHookAssets(o,e);try{let v=Oe(r,"utf-8"),A=x(v).hooks;(!A||!this.hasExistingAqeHooks(A))&&e.services.log("  WARNING: settings.json written but AQE hooks not detected \u2014 check settings-merge logic")}catch{e.services.log("  WARNING: Could not verify settings.json after write")}return e.services.log(`  Settings: ${r}`),e.services.log(`  Hooks dir: ${o}`),e.services.log(`  Hook types: ${d.join(", ")}`),{configured:!0,settingsPath:r,hookTypes:d,existingAqeDetected:m}}writeHooksReadme(e,t){let s=b(e,"README.txt");if(P(s))return;let n=["AQE Hooks Directory","====================","","Claude Code hooks are configured in .claude/settings.json (not as files here).","This directory contains supporting infrastructure for the learning system.","","Configured hook types: "+t.join(", "),"","Files:","  settings.json  \u2014 Hook definitions (in parent .claude/ directory)","  helpers/brain-checkpoint.cjs \u2014 Auto-exports brain to aqe.rvf on session end","  cross-phase-memory.yaml \u2014 QCSD feedback loop configuration","","Manual testing:","  npx agentic-qe hooks session-start --session-id test --json",'  npx agentic-qe hooks route --task "generate tests" --json',"  npx agentic-qe hooks post-edit --file src/example.ts --success --json",""].join(`
-`);M(s,n,"utf-8")}installHookAssets(e,t){let{projectRoot:s}=t;this.installBrainCheckpoint(s,t),this.installStatusline(s,t);let n=b(e,"cross-phase-memory.yaml");if(!P(n)){let r=[b(s,"v3","assets","hooks","cross-phase-memory.yaml"),b(s,"assets","hooks","cross-phase-memory.yaml"),b(s,"node_modules","agentic-qe","v3","assets","hooks","cross-phase-memory.yaml")],i=!1;for(let c of r)if(P(c)){let{copyFileSync:d}=ce("fs");d(c,n),t.services.log("  Installed cross-phase memory config"),i=!0;break}i||M(n,["# Cross-Phase Memory Hooks Configuration","# Generated by aqe init",'version: "1.0"',"enabled: true",""].join(`
-`),"utf-8")}let o=b(e,"v3-domain-workers.json");P(o)||M(o,JSON.stringify({version:"3.0",workers:[{name:"pattern-consolidator",interval:"5m",enabled:!0},{name:"routing-accuracy-monitor",interval:"10m",enabled:!0},{name:"coverage-gap-scanner",interval:"15m",enabled:!0},{name:"flaky-test-detector",interval:"30m",enabled:!0}]},null,2),"utf-8")}hasExistingAqeHooks(e){for(let t of Object.values(e))if(Array.isArray(t)){for(let s of t)if(Pe(s))return!0}return!1}installBrainCheckpoint(e,t){let s=b(e,".claude","helpers");P(s)||oe(s,{recursive:!0});let n=b(s,"brain-checkpoint.cjs"),o=[b(e,".claude","helpers","brain-checkpoint.cjs"),b(e,"node_modules","agentic-qe",".claude","helpers","brain-checkpoint.cjs")];for(let r of o)if(P(r)&&r!==n){let{copyFileSync:i}=ce("fs");i(r,n),t.services.log("  Installed brain-checkpoint.cjs (copied)");return}P(n)||(M(n,this.generateBrainCheckpointScript(),"utf-8"),t.services.log("  Installed brain-checkpoint.cjs (generated)"))}installStatusline(e,t){let s=b(e,".claude","helpers");P(s)||oe(s,{recursive:!0});let n=b(s,"statusline-v3.cjs"),o=[b(e,"node_modules","agentic-qe","assets","helpers","statusline-v3.cjs"),b(e,"assets","helpers","statusline-v3.cjs")];for(let r of o)if(P(r)&&r!==n){let{copyFileSync:i}=ce("fs");i(r,n),t.services.log("  Installed statusline-v3.cjs (copied)");return}P(n)||(M(n,this.generateMinimalStatuslineScript(),"utf-8"),t.services.log("  Installed statusline-v3.cjs (generated)"))}generateMinimalStatuslineScript(){return`#!/usr/bin/env node
+      `).get();if(!t)return null;let s=x(t.value);if(!s.indexedAt)return null;let n=new Date(s.indexedAt);return isNaN(n.getTime())?null:n}catch{return null}}async findChangedFiles(e,t){let n=await(await import("fast-glob")).default(["**/*.ts","**/*.tsx","**/*.js","**/*.jsx","**/*.py"],{cwd:e,ignore:Me}),o=t.getTime(),r=[];for(let i of n){let c=re(e,i);try{Xe(c).mtimeMs>o&&r.push(c)}catch{}}return r}};te();import{existsSync as P,mkdirSync as oe,readFileSync as Oe,writeFileSync as M}from"fs";import{join as w,dirname as Ze}from"path";import{fileURLToPath as et}from"url";var tt=et(import.meta.url),kn=Ze(tt),G=class extends y{name="hooks";description="Configure Claude Code hooks";order=70;critical=!1;requiresPhases=["configuration"];async shouldRun(e){return e.config?.hooks?.claudeCode??!0}async run(e){let t=e.config,{projectRoot:s}=e;if(!t.hooks.claudeCode)return{configured:!1,settingsPath:"",hookTypes:[],existingAqeDetected:!1};let n=w(s,".claude");P(n)||oe(n,{recursive:!0});let o=w(n,"hooks");P(o)||oe(o,{recursive:!0});let r=w(n,"settings.json"),i={};if(P(r))try{let v=Oe(r,"utf-8");i=x(v)}catch{i={}}let c=this.generateHooksConfig(t,s),d=Object.keys(c),u=i.hooks||{},m=this.hasExistingAqeHooks(u);m&&e.services.log("  Detected existing AQE hooks \u2014 replacing with updated config"),i.hooks=Se(u,c);let p=i.env||{};i.env={...p,...Ee(t)};let h=Re(t,s);for(let[v,k]of Object.entries(h))if(v==="_aqePermissions"){let A=i.permissions||{},le=A.allow||[],I=k,g=[...new Set([...le,...I])];i.permissions={...A,allow:g}}else i[v]=k;let f=i.enabledMcpjsonServers||[];f=f.filter(v=>v!=="aqe"),f.includes("agentic-qe")||f.push("agentic-qe"),i.enabledMcpjsonServers=f,M(r,JSON.stringify(i,null,2),"utf-8"),this.writeHooksReadme(o,d),this.installHookAssets(o,e);try{let v=Oe(r,"utf-8"),A=x(v).hooks;(!A||!this.hasExistingAqeHooks(A))&&e.services.log("  WARNING: settings.json written but AQE hooks not detected \u2014 check settings-merge logic")}catch{e.services.log("  WARNING: Could not verify settings.json after write")}return e.services.log(`  Settings: ${r}`),e.services.log(`  Hooks dir: ${o}`),e.services.log(`  Hook types: ${d.join(", ")}`),{configured:!0,settingsPath:r,hookTypes:d,existingAqeDetected:m}}writeHooksReadme(e,t){let s=w(e,"README.txt");if(P(s))return;let n=["AQE Hooks Directory","====================","","Claude Code hooks are configured in .claude/settings.json (not as files here).","This directory contains supporting infrastructure for the learning system.","","Configured hook types: "+t.join(", "),"","Files:","  settings.json  \u2014 Hook definitions (in parent .claude/ directory)","  helpers/brain-checkpoint.cjs \u2014 Auto-exports brain to aqe.rvf on session end","  cross-phase-memory.yaml \u2014 QCSD feedback loop configuration","","Manual testing:","  npx agentic-qe hooks session-start --session-id test --json",'  npx agentic-qe hooks route --task "generate tests" --json',"  npx agentic-qe hooks post-edit --file src/example.ts --success --json",""].join(`
+`);M(s,n,"utf-8")}installHookAssets(e,t){let{projectRoot:s}=t;this.installBrainCheckpoint(s,t),this.installStatusline(s,t);let n=w(e,"cross-phase-memory.yaml");if(!P(n)){let r=[w(s,"v3","assets","hooks","cross-phase-memory.yaml"),w(s,"assets","hooks","cross-phase-memory.yaml"),w(s,"node_modules","agentic-qe","v3","assets","hooks","cross-phase-memory.yaml")],i=!1;for(let c of r)if(P(c)){let{copyFileSync:d}=ce("fs");d(c,n),t.services.log("  Installed cross-phase memory config"),i=!0;break}i||M(n,["# Cross-Phase Memory Hooks Configuration","# Generated by aqe init",'version: "1.0"',"enabled: true",""].join(`
+`),"utf-8")}let o=w(e,"v3-domain-workers.json");P(o)||M(o,JSON.stringify({version:"3.0",workers:[{name:"pattern-consolidator",interval:"5m",enabled:!0},{name:"routing-accuracy-monitor",interval:"10m",enabled:!0},{name:"coverage-gap-scanner",interval:"15m",enabled:!0},{name:"flaky-test-detector",interval:"30m",enabled:!0}]},null,2),"utf-8")}hasExistingAqeHooks(e){for(let t of Object.values(e))if(Array.isArray(t)){for(let s of t)if(Pe(s))return!0}return!1}installBrainCheckpoint(e,t){let s=w(e,".claude","helpers");P(s)||oe(s,{recursive:!0});let n=w(s,"brain-checkpoint.cjs"),o=[w(e,".claude","helpers","brain-checkpoint.cjs"),w(e,"node_modules","agentic-qe",".claude","helpers","brain-checkpoint.cjs")];for(let r of o)if(P(r)&&r!==n){let{copyFileSync:i}=ce("fs");i(r,n),t.services.log("  Installed brain-checkpoint.cjs (copied)");return}P(n)||(M(n,this.generateBrainCheckpointScript(),"utf-8"),t.services.log("  Installed brain-checkpoint.cjs (generated)"))}installStatusline(e,t){let s=w(e,".claude","helpers");P(s)||oe(s,{recursive:!0});let n=w(s,"statusline-v3.cjs"),o=[w(e,"node_modules","agentic-qe","assets","helpers","statusline-v3.cjs"),w(e,"assets","helpers","statusline-v3.cjs")];for(let r of o)if(P(r)&&r!==n){let{copyFileSync:i}=ce("fs");i(r,n),t.services.log("  Installed statusline-v3.cjs (copied)");return}P(n)||(M(n,this.generateMinimalStatuslineScript(),"utf-8"),t.services.log("  Installed statusline-v3.cjs (generated)"))}generateMinimalStatuslineScript(){return`#!/usr/bin/env node
 /**
  * Agentic QE v3 Statusline (minimal fallback, generated by aqe init)
  * For the full statusline, reinstall: npx agentic-qe init --auto
@@ -107,10 +107,10 @@ function verifyBrain() {
 const cmd = process.argv[2] || 'verify';
 const result = cmd === 'export' ? exportBrain() : verifyBrain();
 if (process.argv.includes('--json')) process.stdout.write(JSON.stringify(result));
-`}generateHooksConfig(e,t){return{PreToolUse:[{matcher:"^(Write|Edit|MultiEdit)$",hooks:[{type:"command",command:'npx agentic-qe hooks guard --file "$TOOL_INPUT_file_path" --json',timeout:3e3,continueOnError:!0}]},{matcher:"^(Write|Edit|MultiEdit)$",hooks:[{type:"command",command:'npx agentic-qe hooks pre-edit --file "$TOOL_INPUT_file_path" --json',timeout:5e3,continueOnError:!0}]},{matcher:"^Bash$",hooks:[{type:"command",command:'npx agentic-qe hooks pre-command --command "$TOOL_INPUT_command" --json',timeout:3e3,continueOnError:!0}]},{matcher:"^(Task|Agent)$",hooks:[{type:"command",command:'npx agentic-qe hooks pre-task --description "$TOOL_INPUT_prompt" --json',timeout:5e3,continueOnError:!0}]}],PostToolUse:[{matcher:"^(Write|Edit|MultiEdit)$",hooks:[{type:"command",command:'npx agentic-qe hooks post-edit --file "$TOOL_INPUT_file_path" --success --json',timeout:5e3,continueOnError:!0}]},{matcher:"^Bash$",hooks:[{type:"command",command:'npx agentic-qe hooks post-command --command "$TOOL_INPUT_command" --success --json',timeout:5e3,continueOnError:!0}]},{matcher:"^(Task|Agent)$",hooks:[{type:"command",command:'npx agentic-qe hooks post-task --task-id "$TOOL_RESULT_agent_id" --success --json',timeout:5e3,continueOnError:!0}]}],UserPromptSubmit:[{hooks:[{type:"command",command:"npx agentic-qe hooks route --json",timeout:5e3,continueOnError:!0}]}],SessionStart:[{hooks:[{type:"command",command:'npx agentic-qe hooks session-start --session-id "$SESSION_ID" --json',timeout:1e4,continueOnError:!0}]},{hooks:[{type:"command",command:`sh -c 'exec node "\${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/brain-checkpoint.cjs" verify --json'`,timeout:5e3,continueOnError:!0}]}],Stop:[{hooks:[{type:"command",command:"npx agentic-qe hooks session-end --save-state --json",timeout:5e3,continueOnError:!0}]},{hooks:[{type:"command",command:"npx agentic-qe hooks post-route --success true --json",timeout:5e3,continueOnError:!0}]},{hooks:[{type:"command",command:`sh -c 'exec node "\${CLAUDE_PROJECT_DIR:-.}/.claude/helpers/brain-checkpoint.cjs" export --json'`,timeout:6e4,continueOnError:!0}]}]}}};te();import{existsSync as Ze,readFileSync as et,writeFileSync as tt}from"fs";import{join as nt}from"path";var z=class extends y{name="mcp";description="Configure MCP server";order=80;critical=!1;requiresPhases=["configuration","database"];async run(e){let{projectRoot:t}=e;if(e.options.noMcp)return e.services.log("  MCP: skipped (--no-mcp)"),e.services.log("  CLI commands available: aqe memory, aqe test, aqe coverage, etc."),{configured:!1,mcpPath:"",serverName:""};let s={command:"aqe-mcp",args:[],env:{AQE_LEARNING_ENABLED:"true",AQE_WORKERS_ENABLED:"true",NODE_ENV:"production"}},n=nt(t,".mcp.json"),o={};if(Ze(n))try{let i=et(n,"utf-8");o=x(i)}catch{o={}}o.mcpServers||(o.mcpServers={});let r=o.mcpServers;return r["agentic-qe"]=s,tt(n,JSON.stringify(o,null,2),"utf-8"),e.services.log(`  MCP config: ${n}`),e.services.log("  Server: agentic-qe"),e.services.log("  Learning: enabled"),e.services.log("  Workers: enabled"),{configured:!0,mcpPath:n,serverName:"agentic-qe"}}};import{existsSync as E,readFileSync as ot,readdirSync as it}from"fs";import{join as R}from"path";ee();import{spawnSync as st}from"node:child_process";import*as ie from"node:os";import*as Qe from"node:fs";var fe="vibium@^26.3.18",Le={platform:()=>ie.platform(),arch:()=>ie.arch(),existsSync:l=>Qe.existsSync(l)},Fe=["/usr/bin/chromium","/usr/bin/chromium-browser","/usr/bin/google-chrome","/usr/bin/google-chrome-stable","/snap/bin/chromium"];function rt(l=Le){if(l.platform()!=="linux"||l.arch()!=="arm64")return;let e=Fe.find(t=>l.existsSync(t));return e?{code:"linux-arm64-system-chromium-found",browserPath:e,message:`Linux aarch64 detected. Vibium v26.3.x does not auto-download Chrome for Testing on ARM64. Found system browser at ${e}. Export VIBIUM_BROWSER_PATH=${e} before running vibium.`}:{code:"linux-arm64-no-system-chromium",message:`Linux aarch64 detected. Vibium v26.3.x does not auto-download Chrome for Testing on ARM64, and no system chromium was found on PATH (checked: ${Fe.join(", ")}). 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The rest of the AQE install will continue.`)}if(n.withN8n){let k=await $e({projectRoot:s,installAgents:!0,installSkills:!0,overwrite:r,n8nApiConfig:n.n8nApiConfig}).install();d=k.agentsInstalled.length,u=k.skillsInstalled.length,k.errors.length>0&&e.services.warn(`N8n warnings: ${k.errors.join(", ")}`)}let A=n.autoMode&&E(R(s,"opencode.json"));if(n.withOpenCode||A){let{createOpenCodeInstaller:g}=await import("./opencode-installer-2NICPXQZ.js"),a=await g({projectRoot:s,installAgents:!0,installSkills:!0,installTools:!0,overwrite:r}).install();m=a.agentsInstalled.length,p=a.skillsInstalled.length,a.errors.length>0&&e.services.warn(`OpenCode warnings: ${a.errors.join(", ")}`)}e.services.log(`  Skills: ${i}`),e.services.log(`  Agents: ${c}`),n.withN8n&&(e.services.log(`  N8n agents: ${d}`),e.services.log(`  N8n skills: ${u}`)),(n.withOpenCode||A)&&(e.services.log(`  OpenCode agents: ${m}`),e.services.log(`  OpenCode skills: ${p}`));let le=n.autoMode&&E(R(s,".kiro"));if(n.withKiro||le){let{createKiroInstaller:g}=await import("./kiro-installer-ZVOLX6AX.js"),a=await g({projectRoot:s,installAgents:!0,installSkills:!0,installHooks:!0,installSteering:!0,overwrite:r}).install();h=a.agentsInstalled.length,f=a.skillsInstalled.length,v=a.hooksInstalled.length,a.errors.length>0&&e.services.warn(`Kiro warnings: ${a.errors.join(", ")}`),e.services.log(`  Kiro agents: ${h}`),e.services.log(`  Kiro skills: ${f}`),e.services.log(`  Kiro hooks: ${v}`),e.services.log(`  Kiro steering: ${a.steeringInstalled.length}`),a.mcpConfigured&&e.services.log("  Kiro MCP: .kiro/settings/mcp.json")}let I=[];if(n.withCopilot||n.autoMode&&E(R(s,".vscode"))){let{createCopilotInstaller:g}=await import("./copilot-installer-YXANWEVX.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("copilot"),a.errors.length>0&&e.services.warn(`Copilot warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Copilot MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Copilot rules: ${a.rulesPath}`)}if(n.withCursor||n.autoMode&&E(R(s,".cursor"))){let{createCursorInstaller:g}=await import("./cursor-installer-QIZPJ5YQ.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("cursor"),a.errors.length>0&&e.services.warn(`Cursor warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Cursor MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Cursor rules: ${a.rulesPath}`)}if(n.withCline){let{createClineInstaller:g}=await import("./cline-installer-U6KRJJHQ.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("cline"),a.errors.length>0&&e.services.warn(`Cline warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Cline MCP: ${a.configPath}`),a.modeInstalled&&e.services.log(`  Cline mode: ${a.modePath}`)}if(n.withKiloCode||n.autoMode&&E(R(s,".kilocode"))){let{createKiloCodeInstaller:g}=await import("./kilocode-installer-Q5A6WBX2.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("kilocode"),a.errors.length>0&&e.services.warn(`Kilo Code warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Kilo Code MCP: ${a.configPath}`),a.modeInstalled&&e.services.log(`  Kilo Code mode: ${a.modePath}`)}if(n.withRooCode||n.autoMode&&E(R(s,".roo"))){let{createRooCodeInstaller:g}=await import("./roocode-installer-Y5YVCVVS.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("roocode"),a.errors.length>0&&e.services.warn(`Roo Code warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Roo Code MCP: ${a.configPath}`),a.modeInstalled&&e.services.log(`  Roo Code mode: ${a.modePath}`)}if(n.withCodex||n.autoMode&&E(R(s,".codex"))){let{createCodexInstaller:g}=await import("./codex-installer-52W4TK27.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("codex"),a.errors.length>0&&e.services.warn(`Codex warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Codex MCP: ${a.configPath}`),a.agentsMdInstalled&&e.services.log(`  Codex AGENTS.md: ${a.agentsMdPath}`)}if(n.withWindsurf||n.autoMode&&E(R(s,".windsurf"))){let{createWindsurfInstaller:g}=await import("./windsurf-installer-A7FNN7RB.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("windsurf"),a.errors.length>0&&e.services.warn(`Windsurf warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Windsurf MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Windsurf rules: ${a.rulesPath}`)}if(n.withContinueDev||n.autoMode&&E(R(s,".continue"))){let{createContinueDevInstaller:g}=await import("./continuedev-installer-BNUOLW2M.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("continuedev"),a.errors.length>0&&e.services.warn(`Continue.dev warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Continue.dev MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Continue.dev rules: ${a.rulesPath}`)}return I.length>0&&e.services.log(`  Platforms configured: ${I.join(", ")}`),{skillsInstalled:i,agentsInstalled:c,n8nAgents:d,n8nSkills:u,openCodeAgents:m,openCodeSkills:p,kiroAgents:h,kiroSkills:f,kiroHooks:v,platformsConfigured:I,browserEngine:w}}detectVersionUpgrade(e){let t=e.config.version,s=R(e.projectRoot,".agentic-qe","config.yaml");if(E(s))try{let i=ot(s,"utf-8").match(/version:\s*"?([^"\n]+)"?/)?.[1];if(i===t)return!1;if(i!==void 0)return!0}catch{}let n=R(e.projectRoot,".claude","agents","v3");try{return E(n)&&it(n).some(o=>o.endsWith(".md")&&o.startsWith("qe-"))}catch{return!1}}};import{existsSync as at,mkdirSync as lt,writeFileSync as ae}from"fs";import{join as O}from"path";var Y=class extends y{name="workers";description="Configure background workers";order=100;critical=!1;requiresPhases=["configuration"];async shouldRun(e){let t=e.config;return t?.workers?.daemonAutoStart&&(t?.workers?.enabled?.length??0)>0}async run(e){let t=e.config,{projectRoot:s}=e;if(!t.workers.daemonAutoStart||t.workers.enabled.length===0)return{workersDir:"",workersConfigured:0,registryPath:"",daemonStarted:!1,daemonPid:null};let n=O(s,".agentic-qe","workers");at(n)||lt(n,{recursive:!0});let o={"learning-consolidation":18e5,"pattern-consolidator":18e5,"test-health":3e5,"coverage-tracker":6e5,"coverage-gap-scanner":6e5,"flaky-detector":9e5,"flaky-test-detector":9e5,"security-scan":18e5,"quality-gate":3e5,"compliance-checker":18e5,"defect-predictor":9e5,"regression-monitor":6e5,"routing-accuracy-monitor":9e5,"performance-baseline":36e5,"cloud-sync":3e5},r={};for(let h of t.workers.enabled)r[h]={name:h,enabled:!0,interval:t.workers.intervals[h]||o[h]||6e4,lastRun:null,status:"pending"};let i=O(n,"registry.json"),c={version:t.version,maxConcurrent:t.workers.maxConcurrent,workers:r,createdAt:new Date().toISOString(),daemonPid:null};ae(i,JSON.stringify(c,null,2),"utf-8");for(let h of t.workers.enabled){let f=O(n,`${h}.json`),v={name:h,enabled:!0,interval:t.workers.intervals[h]||o[h]||6e4,projectRoot:s,dataDir:O(s,".agentic-qe","data"),createdAt:new Date().toISOString()};ae(f,JSON.stringify(v,null,2),"utf-8")}let d=O(n,"start-daemon.cjs");ae(d,`#!/usr/bin/env node
+  Then re-run \`aqe init\` to verify. The rest of the AQE install will continue.`)}if(n.withN8n){let b=await $e({projectRoot:s,installAgents:!0,installSkills:!0,overwrite:r,n8nApiConfig:n.n8nApiConfig}).install();d=b.agentsInstalled.length,u=b.skillsInstalled.length,b.errors.length>0&&e.services.warn(`N8n warnings: ${b.errors.join(", ")}`)}let A=n.autoMode&&E(R(s,"opencode.json"));if(n.withOpenCode||A){let{createOpenCodeInstaller:g}=await import("./opencode-installer-6TTN26RG.js"),a=await g({projectRoot:s,installAgents:!0,installSkills:!0,installTools:!0,overwrite:r}).install();m=a.agentsInstalled.length,p=a.skillsInstalled.length,a.errors.length>0&&e.services.warn(`OpenCode warnings: ${a.errors.join(", ")}`)}e.services.log(`  Skills: ${i}`),e.services.log(`  Agents: ${c}`),n.withN8n&&(e.services.log(`  N8n agents: ${d}`),e.services.log(`  N8n skills: ${u}`)),(n.withOpenCode||A)&&(e.services.log(`  OpenCode agents: ${m}`),e.services.log(`  OpenCode skills: ${p}`));let le=n.autoMode&&E(R(s,".kiro"));if(n.withKiro||le){let{createKiroInstaller:g}=await import("./kiro-installer-EAB26M55.js"),a=await g({projectRoot:s,installAgents:!0,installSkills:!0,installHooks:!0,installSteering:!0,overwrite:r}).install();h=a.agentsInstalled.length,f=a.skillsInstalled.length,v=a.hooksInstalled.length,a.errors.length>0&&e.services.warn(`Kiro warnings: ${a.errors.join(", ")}`),e.services.log(`  Kiro agents: ${h}`),e.services.log(`  Kiro skills: ${f}`),e.services.log(`  Kiro hooks: ${v}`),e.services.log(`  Kiro steering: ${a.steeringInstalled.length}`),a.mcpConfigured&&e.services.log("  Kiro MCP: .kiro/settings/mcp.json")}let I=[];if(n.withCopilot||n.autoMode&&E(R(s,".vscode"))){let{createCopilotInstaller:g}=await import("./copilot-installer-D6BAQVIO.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("copilot"),a.errors.length>0&&e.services.warn(`Copilot warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Copilot MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Copilot rules: ${a.rulesPath}`)}if(n.withCursor||n.autoMode&&E(R(s,".cursor"))){let{createCursorInstaller:g}=await import("./cursor-installer-WAWSS2K2.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("cursor"),a.errors.length>0&&e.services.warn(`Cursor warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Cursor MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Cursor rules: ${a.rulesPath}`)}if(n.withCline){let{createClineInstaller:g}=await import("./cline-installer-2NXQGW73.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("cline"),a.errors.length>0&&e.services.warn(`Cline warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Cline MCP: ${a.configPath}`),a.modeInstalled&&e.services.log(`  Cline mode: ${a.modePath}`)}if(n.withKiloCode||n.autoMode&&E(R(s,".kilocode"))){let{createKiloCodeInstaller:g}=await import("./kilocode-installer-YC5RJIY4.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("kilocode"),a.errors.length>0&&e.services.warn(`Kilo Code warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Kilo Code MCP: ${a.configPath}`),a.modeInstalled&&e.services.log(`  Kilo Code mode: ${a.modePath}`)}if(n.withRooCode||n.autoMode&&E(R(s,".roo"))){let{createRooCodeInstaller:g}=await import("./roocode-installer-2LMVZOUZ.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("roocode"),a.errors.length>0&&e.services.warn(`Roo Code warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Roo Code MCP: ${a.configPath}`),a.modeInstalled&&e.services.log(`  Roo Code mode: ${a.modePath}`)}if(n.withCodex||n.autoMode&&E(R(s,".codex"))){let{createCodexInstaller:g}=await import("./codex-installer-V7PII6GL.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("codex"),a.errors.length>0&&e.services.warn(`Codex warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Codex MCP: ${a.configPath}`),a.agentsMdInstalled&&e.services.log(`  Codex AGENTS.md: ${a.agentsMdPath}`)}if(n.withWindsurf||n.autoMode&&E(R(s,".windsurf"))){let{createWindsurfInstaller:g}=await import("./windsurf-installer-7AFXJTPU.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("windsurf"),a.errors.length>0&&e.services.warn(`Windsurf warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Windsurf MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Windsurf rules: ${a.rulesPath}`)}if(n.withContinueDev||n.autoMode&&E(R(s,".continue"))){let{createContinueDevInstaller:g}=await import("./continuedev-installer-GOT4TKNT.js"),a=await g({projectRoot:s,overwrite:r}).install();a.mcpConfigured&&I.push("continuedev"),a.errors.length>0&&e.services.warn(`Continue.dev warnings: ${a.errors.join(", ")}`),a.mcpConfigured&&e.services.log(`  Continue.dev MCP: ${a.configPath}`),a.rulesInstalled&&e.services.log(`  Continue.dev rules: ${a.rulesPath}`)}return I.length>0&&e.services.log(`  Platforms configured: ${I.join(", ")}`),{skillsInstalled:i,agentsInstalled:c,n8nAgents:d,n8nSkills:u,openCodeAgents:m,openCodeSkills:p,kiroAgents:h,kiroSkills:f,kiroHooks:v,platformsConfigured:I,browserEngine:k}}detectVersionUpgrade(e){let t=e.config.version,s=R(e.projectRoot,".agentic-qe","config.yaml");if(E(s))try{let i=lt(s,"utf-8").match(/version:\s*"?([^"\n]+)"?/)?.[1];if(i===t)return!1;if(i!==void 0)return!0}catch{}let n=R(e.projectRoot,".claude","agents","v3");try{return E(n)&&ct(n).some(o=>o.endsWith(".md")&&o.startsWith("qe-"))}catch{return!1}}};import{existsSync as dt,mkdirSync as ut,writeFileSync as ae}from"fs";import{join as O,dirname as pt}from"path";import{fileURLToPath as mt}from"url";var gt=mt(import.meta.url),Wn=pt(gt),Y=class extends y{name="workers";description="Configure background workers";order=100;critical=!1;requiresPhases=["configuration"];async shouldRun(e){let t=e.config;return t?.workers?.daemonAutoStart&&(t?.workers?.enabled?.length??0)>0}async run(e){let t=e.config,{projectRoot:s}=e;if(!t.workers.daemonAutoStart||t.workers.enabled.length===0)return{workersDir:"",workersConfigured:0,registryPath:"",daemonStarted:!1,daemonPid:null};let n=O(s,".agentic-qe","workers");dt(n)||ut(n,{recursive:!0});let o={"learning-consolidation":18e5,"pattern-consolidator":18e5,"test-health":3e5,"coverage-tracker":6e5,"coverage-gap-scanner":6e5,"flaky-detector":9e5,"flaky-test-detector":9e5,"security-scan":18e5,"quality-gate":3e5,"compliance-checker":18e5,"defect-predictor":9e5,"regression-monitor":6e5,"routing-accuracy-monitor":9e5,"performance-baseline":36e5,"cloud-sync":3e5},r={};for(let h of t.workers.enabled)r[h]={name:h,enabled:!0,interval:t.workers.intervals[h]||o[h]||6e4,lastRun:null,status:"pending"};let i=O(n,"registry.json"),c={version:t.version,maxConcurrent:t.workers.maxConcurrent,workers:r,createdAt:new Date().toISOString(),daemonPid:null};ae(i,JSON.stringify(c,null,2),"utf-8");for(let h of t.workers.enabled){let f=O(n,`${h}.json`),v={name:h,enabled:!0,interval:t.workers.intervals[h]||o[h]||6e4,projectRoot:s,dataDir:O(s,".agentic-qe","data"),createdAt:new Date().toISOString()};ae(f,JSON.stringify(v,null,2),"utf-8")}let d=O(n,"start-daemon.cjs");ae(d,`#!/usr/bin/env node
 // AQE v3 Worker Daemon Startup Script (cross-platform)
 // Generated by aqe init
 // Starts the MCP server with background workers enabled
@@ -133,12 +133,30 @@ if (existsSync(pidFile)) {
 const ts = new Date().toISOString();
 appendFileSync(logFile, '[' + ts + '] Starting AQE v3 Worker Daemon...\\n');
 
-// Find the best way to run aqe-mcp
+// Find the best way to run aqe-mcp.
+//
+// #488 B.1: candidate ordering matters for the pidfile contract. When we
+// spawn the real MCP binary directly, child.pid is the long-lived process
+// \u2014 \`process.kill(pid, 0)\` against the pidfile correctly reports liveness.
+// When we fall back to \`npx --yes agentic-qe mcp\`, child.pid is the npx
+// wrapper PID, which exits as soon as it has forked the real bundle. The
+// pidfile then points at a dead process and idempotency checks misbehave.
+//
+// We try in order: local .bin \u2192 local node_modules bundle \u2192 global install
+// via require.resolve \u2192 npx wrapper (last resort, with the caveat above).
 const candidates = [
   join(projectRoot, 'node_modules', '.bin', 'aqe-mcp'),
   join(projectRoot, 'node_modules', 'agentic-qe', 'dist', 'mcp', 'bundle.js'),
 ];
 
+// Probe globally-installed agentic-qe (npm install -g) via require.resolve.
+// This is the case the npx fallback used to silently cover with a bad PID.
+try {
+  candidates.push(require.resolve('agentic-qe/dist/mcp/bundle.js'));
+} catch {
+  // Not globally installed \u2014 fall through to npx fallback below.
+}
+
 let mcpCmd, mcpArgs;
 const binCandidate = candidates.find(c => existsSync(c));
 
@@ -151,6 +169,7 @@ if (binCandidate && binCandidate.endsWith('bundle.js')) {
 } else {
   mcpCmd = process.platform === 'win32' ? 'npx.cmd' : 'npx';
   mcpArgs = ['--yes', 'agentic-qe', 'mcp'];
+  appendFileSync(logFile, '[' + ts + '] WARNING: using npx fallback \u2014 daemon.pid will point at the npx wrapper, not the MCP server. \`aqe daemon status\` may misreport liveness after the wrapper exits.\\n');
 }
 
 appendFileSync(logFile, '[' + ts + '] Using: ' + mcpCmd + ' ' + mcpArgs.join(' ') + '\\n');
@@ -189,7 +208,7 @@ try {
   console.log('Daemon not running (stale PID file)');
   try { unlinkSync(pidFile); } catch {}
 }
-`),e.services.log(`  Workers dir: ${n}`),e.services.log(`  Workers: ${t.workers.enabled.join(", ")}`),e.services.log(`  Registry: ${i}`),{workersDir:n,workersConfigured:t.workers.enabled.length,registryPath:i,daemonStarted:!1,daemonPid:null}}};import{existsSync as ct,readFileSync as dt,writeFileSync as ye}from"fs";import{join as Be}from"path";var J=class extends y{name="claude-md";description="Generate CLAUDE.md";order=110;critical=!1;requiresPhases=["configuration"];async run(e){let t=e.config,{projectRoot:s}=e,n=Be(s,"CLAUDE.md"),o=this.generateContent(t),r=!1;if(ct(n)){let i=dt(n,"utf-8");if(i.includes("## Agentic QE v3"))return e.services.log("  CLAUDE.md already has AQE section"),{generated:!1,path:n,backupCreated:!1};let c=Be(s,"CLAUDE.md.backup");ye(c,i,"utf-8"),r=!0,ye(n,i+`
+`),e.services.log(`  Workers dir: ${n}`),e.services.log(`  Workers: ${t.workers.enabled.join(", ")}`),e.services.log(`  Registry: ${i}`),{workersDir:n,workersConfigured:t.workers.enabled.length,registryPath:i,daemonStarted:!1,daemonPid:null}}};import{existsSync as ft,readFileSync as ht,writeFileSync as ye}from"fs";import{join as Ve}from"path";var J=class extends y{name="claude-md";description="Generate CLAUDE.md";order=110;critical=!1;requiresPhases=["configuration"];async run(e){let t=e.config,{projectRoot:s}=e,n=Ve(s,"CLAUDE.md"),o=this.generateContent(t),r=!1;if(ft(n)){let i=ht(n,"utf-8");if(i.includes("## Agentic QE v3"))return e.services.log("  CLAUDE.md already has AQE section"),{generated:!1,path:n,backupCreated:!1};let c=Ve(s,"CLAUDE.md.backup");ye(c,i,"utf-8"),r=!0,ye(n,i+`
 
 `+o,"utf-8")}else ye(n,o,"utf-8");return e.services.log(`  Path: ${n}`),r&&e.services.log("  Backup created"),{generated:!0,path:n,backupCreated:r}}generateContent(e){let t=e.domains.enabled.slice(0,6).join(", "),s=Math.max(0,e.domains.enabled.length-6);return`## Agentic QE v3
 
@@ -353,7 +372,7 @@ Task({ prompt: "Security audit", subagent_type: "qe-security-scanner", run_in_ba
 
 ---
 *Generated by AQE v3 init - ${new Date().toISOString()}*
-`}};import{existsSync as D,readFileSync as ut}from"fs";import{join as F,dirname as pt}from"path";import{mkdirSync as He,writeFileSync as mt}from"fs";de();var X=class extends y{name="verification";description="Verify installation";order=120;critical=!0;requiresPhases=["database","configuration"];async run(e){let t=e.config,{projectRoot:s}=e,n=[],o=F(s,".agentic-qe","memory.db");n.push({name:"Database exists",passed:D(o)}),n.push({name:".agentic-qe directory",passed:D(F(s,".agentic-qe"))});let r=F(s,".agentic-qe","config.yaml");await this.saveConfig(t,s),n.push({name:"Config saved",passed:D(r)});let i=await this.writeVersionToDb(t.version,s);n.push({name:"Version marker",passed:i});let c=["Database exists",".agentic-qe directory","Config saved"],d=n.filter(u=>c.includes(u.name)).every(u=>u.passed);e.services.log("  Verification checks:");for(let u of n){let m=c.includes(u.name),p=u.passed?"\u2713":m?"\u2717":"\u26A0",h=!m&&!u.passed?" (optional)":"";e.services.log(`    ${p} ${u.name}${h}`)}return{verified:d,versionWritten:i,configSaved:D(r),checks:n}}async writeVersionToDb(e,t){let s=F(t,".agentic-qe","memory.db");try{let n=pt(s);D(n)||He(n,{recursive:!0});let o=_(s);try{o.exec(`
+`}};import{existsSync as D,readFileSync as yt}from"fs";import{join as F,dirname as vt}from"path";import{mkdirSync as He,writeFileSync as bt}from"fs";de();var X=class extends y{name="verification";description="Verify installation";order=120;critical=!0;requiresPhases=["database","configuration"];async run(e){let t=e.config,{projectRoot:s}=e,n=[],o=F(s,".agentic-qe","memory.db");n.push({name:"Database exists",passed:D(o)}),n.push({name:".agentic-qe directory",passed:D(F(s,".agentic-qe"))});let r=F(s,".agentic-qe","config.yaml");await this.saveConfig(t,s),n.push({name:"Config saved",passed:D(r)});let i=await this.writeVersionToDb(t.version,s);n.push({name:"Version marker",passed:i});let c=["Database exists",".agentic-qe directory","Config saved"],d=n.filter(u=>c.includes(u.name)).every(u=>u.passed);e.services.log("  Verification checks:");for(let u of n){let m=c.includes(u.name),p=u.passed?"\u2713":m?"\u2717":"\u26A0",h=!m&&!u.passed?" (optional)":"";e.services.log(`    ${p} ${u.name}${h}`)}return{verified:d,versionWritten:i,configSaved:D(r),checks:n}}async writeVersionToDb(e,t){let s=F(t,".agentic-qe","memory.db");try{let n=vt(s);D(n)||He(n,{recursive:!0});let o=_(s);try{o.exec(`
           CREATE TABLE IF NOT EXISTS kv_store (
             key TEXT NOT NULL,
             namespace TEXT NOT NULL,
@@ -368,9 +387,9 @@ Task({ prompt: "Security audit", subagent_type: "qe-security-scanner", run_in_ba
         `).run("aqe_version",JSON.stringify(e),r),o.prepare(`
           INSERT OR REPLACE INTO kv_store (key, namespace, value, created_at)
           VALUES (?, '_system', ?, ?)
-        `).run("init_timestamp",JSON.stringify(new Date().toISOString()),r),o.close(),!0}catch{return o.close(),!1}}catch{return!1}}async saveConfig(e,t){let s=F(t,".agentic-qe");D(s)||He(s,{recursive:!0});let n=F(s,"config.yaml");if(D(n)){let r=this.loadExistingConfig(n);r&&(e=this.mergeConfigs(e,r))}let o=this.configToYAML(e);mt(n,o,"utf-8")}loadExistingConfig(e){try{let t=ut(e,"utf-8");return this.parseYAML(t)}catch{return null}}parseYAML(e){try{let t={},s=e.split(`
+        `).run("init_timestamp",JSON.stringify(new Date().toISOString()),r),o.close(),!0}catch{return o.close(),!1}}catch{return!1}}async saveConfig(e,t){let s=F(t,".agentic-qe");D(s)||He(s,{recursive:!0});let n=F(s,"config.yaml");if(D(n)){let r=this.loadExistingConfig(n);r&&(e=this.mergeConfigs(e,r))}let o=this.configToYAML(e);bt(n,o,"utf-8")}loadExistingConfig(e){try{let t=yt(e,"utf-8");return this.parseYAML(t)}catch{return null}}parseYAML(e){try{let t={},s=e.split(`
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${String(l.summary.agentsInstalled).padEnd(47)} \u2502`),e.push(`\u2502  Workers: ${String(l.summary.workersStarted).padEnd(46)} \u2502`),e.push(`\u2502  Hooks: ${l.summary.hooksConfigured?"Yes":"No".padEnd(48)} \u2502`),e.push(`\u2502  MCP: ${l.summary.mcpConfigured?"Yes":"No".padEnd(50)} \u2502`),e.push(`\u2502  CLAUDE.md: ${l.summary.claudeMdGenerated?"Yes":"No".padEnd(44)} \u2502`),e.push("\u251C\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2524");let t=l.success?"\u2713 AQE v3 initialized successfully":"\u2717 Initialization failed";return e.push(`\u2502  ${t.padEnd(57)} \u2502`),e.push("\u2514\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2518"),e.push(""),e.join(`
-`)}export{ke as ModularInitOrchestrator,$t as createModularInitOrchestrator,Fs as formatInitResultModular,Os as quickInitModular};
+\u274C Critical phase failed: ${n.name}`),n.rollback)try{await n.rollback(this.context)}catch(i){console.error(`Rollback failed: ${i}`)}return this.createFailureResult(t,e)}if(r.skipRemaining)break}return this.createSuccessResult(t,e)}catch(s){return t.push({step:"Initialization Failed",status:"error",message:S(s),durationMs:0}),this.createFailureResult(t,e)}}createSuccessResult(e,t){let s=this.context.config,n=this.context.results.get("learning"),o=this.context.results.get("code-intelligence"),r=this.context.results.get("assets"),i=this.context.results.get("hooks"),c=this.context.results.get("mcp"),d=this.context.results.get("claude-md"),u=this.context.results.get("workers");return{success:!0,config:s||ue("unknown",this.context.projectRoot),steps:e,summary:{projectAnalyzed:this.context.results.has("analysis"),configGenerated:this.context.results.has("configuration"),codeIntelligenceIndexed:o?.data?.entries??0,patternsLoaded:n?.data?.patternsLoaded??0,skillsInstalled:r?.data?.skillsInstalled??0,agentsInstalled:r?.data?.agentsInstalled??0,hooksConfigured:i?.data?.configured??!1,mcpConfigured:c?.data?.configured??!1,claudeMdGenerated:d?.data?.generated??!1,workersStarted:u?.data?.workersConfigured??0},totalDurationMs:Date.now()-t,timestamp:new Date}}createFailureResult(e,t){return{success:!1,config:ue("unknown",this.context.projectRoot),steps:e,summary:{projectAnalyzed:!1,configGenerated:!1,codeIntelligenceIndexed:0,patternsLoaded:0,skillsInstalled:0,agentsInstalled:0,hooksConfigured:!1,mcpConfigured:!1,claudeMdGenerated:!1,workersStarted:0},totalDurationMs:Date.now()-t,timestamp:new Date}}getPhase(e){return this.phases.find(t=>t.name===e)}getPhases(){return[...this.phases]}getContext(){return this.context}};function Ot(l){return new be(l)}async function Gs(l){return await Ot({projectRoot:l,autoMode:!0}).initialize()}function zs(l){let e=[];e.push(""),e.push("\u250C\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2510"),e.push("\u2502                    AQE v3 Initialization                     \u2502"),e.push("\u251C\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2524");for(let s of l.steps){let n=s.status==="success"?"\u2713":s.status==="error"?"\u2717":"\u25CB",o=s.step.substring(0,48).padEnd(48);e.push(`\u2502  ${n} ${o} ${String(s.durationMs).padStart(4)}ms \u2502`)}e.push("\u251C\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2524"),e.push(`\u2502  Project: ${l.config.project.name.substring(0,45).padEnd(45)} \u2502`),e.push(`\u2502  Type: ${l.config.project.type.padEnd(48)} \u2502`),e.push(`\u2502  Code Intel: ${String(l.summary.codeIntelligenceIndexed).padEnd(43)} \u2502`),e.push(`\u2502  Patterns: ${String(l.summary.patternsLoaded).padEnd(45)} \u2502`),e.push(`\u2502  Skills: ${String(l.summary.skillsInstalled).padEnd(47)} \u2502`),e.push(`\u2502  Agents: ${String(l.summary.agentsInstalled).padEnd(47)} \u2502`),e.push(`\u2502  Workers: ${String(l.summary.workersStarted).padEnd(46)} \u2502`),e.push(`\u2502  Hooks: ${l.summary.hooksConfigured?"Yes":"No".padEnd(48)} \u2502`),e.push(`\u2502  MCP: ${l.summary.mcpConfigured?"Yes":"No".padEnd(50)} \u2502`),e.push(`\u2502  CLAUDE.md: ${l.summary.claudeMdGenerated?"Yes":"No".padEnd(44)} \u2502`),e.push("\u251C\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2524");let t=l.success?"\u2713 AQE v3 initialized successfully":"\u2717 Initialization failed";return e.push(`\u2502  ${t.padEnd(57)} \u2502`),e.push("\u2514\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2518"),e.push(""),e.join(`
+`)}export{be as ModularInitOrchestrator,Ot as createModularInitOrchestrator,zs as formatInitResultModular,Gs as quickInitModular};

package/dist/cli/chunks/{pipeline-B55E7S5P.js → pipeline-EWLJCY5G.js}

@@ -1,5 +1,5 @@
-import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.29");process.exit(0)}
-import{a as y,b as w,c as u}from"./chunk-BUMNLVMC.js";import"./chunk-YCK464TF.js";import{Command as O}from"commander";import{resolve as A}from"path";import s from"chalk";import*as M from"node:fs/promises";import{parse as W}from"yaml";var E=["eq","neq","gt","gte","lt","lte","contains","exists"],D=["sequential","parallel"],N=/\$\{([^}]+)\}/g,k=class{parse(r,t){try{let n=this.interpolateVariables(r,t??{}),a=W(n);return this.validateAndConvert(a)}catch(n){return u(n instanceof Error?new Error(`YAML parse error: ${n.message}`):new Error(`YAML parse error: ${String(n)}`))}}async loadFromFile(r,t){try{let n=await M.readFile(r,"utf-8");return this.parse(n,t)}catch(n){return u(n instanceof Error?new Error(`Failed to read pipeline file '${r}': ${n.message}`):new Error(`Failed to read pipeline file '${r}': ${String(n)}`))}}interpolateVariables(r,t){return r.replace(N,(n,a)=>{let o=this.resolveVarPath(t,a);return o===void 0?n:String(o)})}validateSchema(r){return this.validateAndConvert(r)}validateAndConvert(r){if(!r||typeof r!="object"||Array.isArray(r))return u(new Error("YAML must parse to an object"));let t=r;if(!t.id||typeof t.id!="string")return u(new Error("Missing or invalid required field 'id' (string)"));if(!t.name||typeof t.name!="string")return u(new Error("Missing or invalid required field 'name' (string)"));if(!t.steps||!Array.isArray(t.steps)||t.steps.length===0)return u(new Error("'steps' must be a non-empty array"));let n=typeof t.description=="string"?t.description:"",a=typeof t.version=="string"?t.version:"1.0.0",o;if(t.defaultMode!==void 0){if(!D.includes(t.defaultMode))return u(new Error(`Invalid defaultMode '${String(t.defaultMode)}'. Must be one of: ${D.join(", ")}`));o=t.defaultMode}let e;if(t.timeout!==void 0){if(typeof t.timeout!="number"||t.timeout<=0)return u(new Error("'timeout' must be a positive number"));e=t.timeout}let i=Array.isArray(t.tags)?t.tags.filter(g=>typeof g=="string"):void 0,l=this.validateSteps(t.steps);if(!l.success)return l;let d;if(t.triggers!==void 0){if(!Array.isArray(t.triggers))return u(new Error("'triggers' must be an array"));let g=this.validateTriggers(t.triggers);if(!g.success)return g;d=g.value}let p=this.detectCircularDependencies(l.value);if(p)return u(new Error(`Circular dependency detected: ${p}`));let c={id:t.id,name:t.name,description:n,version:a,steps:l.value,...o!==void 0&&{defaultMode:o},...e!==void 0&&{timeout:e},...i!==void 0&&{tags:i},...d!==void 0&&{triggers:d}};return w(c)}validateSteps(r){let t=[],n=new Set;for(let a=0;a<r.length;a++){let o=r[a];if(!o||typeof o!="object"||Array.isArray(o))return u(new Error(`Step at index ${a} must be an object`));let e=o;if(!e.id||typeof e.id!="string")return u(new Error(`Step at index ${a}: missing or invalid 'id' (string)`));if(n.has(e.id))return u(new Error(`Duplicate step ID: ${e.id}`));if(n.add(e.id),!e.name||typeof e.name!="string")return u(new Error(`Step '${e.id}': missing or invalid 'name' (string)`));if(!e.domain||typeof e.domain!="string")return u(new Error(`Step '${e.id}': missing or invalid 'domain' (string)`));if(!y.includes(e.domain))return u(new Error(`Step '${e.id}': invalid domain '${e.domain}'. Must be one of: ${y.join(", ")}`));if(!e.action||typeof e.action!="string")return u(new Error(`Step '${e.id}': missing or invalid 'action' (string)`));let i=this.validateStringRecord(e.inputMapping,`Step '${e.id}'.inputMapping`);if(i!==void 0&&i instanceof Error)return u(i);let l=this.validateStringRecord(e.outputMapping,`Step '${e.id}'.outputMapping`);if(l!==void 0&&l instanceof Error)return u(l);let d;if(e.dependsOn!==void 0){if(!Array.isArray(e.dependsOn)||!e.dependsOn.every(f=>typeof f=="string"))return u(new Error(`Step '${e.id}': 'dependsOn' must be an array of strings`));for(let f of e.dependsOn)if(!r.some(j=>j.id===f))return u(new Error(`Step '${e.id}' depends on unknown step: ${f}`));d=e.dependsOn}let p;if(e.condition!==void 0){let f=this.validateCondition(e.condition,`Step '${e.id}'.condition`);if(!f.success)return f;p=f.value}let c;if(e.skipCondition!==void 0){let f=this.validateCondition(e.skipCondition,`Step '${e.id}'.skipCondition`);if(!f.success)return f;c=f.value}let g;if(e.timeout!==void 0){if(typeof e.timeout!="number"||e.timeout<=0)return u(new Error(`Step '${e.id}': 'timeout' must be a positive number`));g=e.timeout}let $;if(e.retry!==void 0){let f=this.validateRetry(e.retry,e.id);if(!f.success)return f;$=f.value}let b;if(e.rollback!==void 0){let f=this.validateRollback(e.rollback,e.id);if(!f.success)return f;b=f.value}let R=typeof e.continueOnFailure=="boolean"?e.continueOnFailure:void 0,S;if(e.approval!==void 0){let f=this.validateApproval(e.approval,e.id);if(!f.success)return f;S=f.value}let C={id:e.id,name:e.name,domain:e.domain,action:e.action,...i!==void 0&&{inputMapping:i},...l!==void 0&&{outputMapping:l},...d!==void 0&&{dependsOn:d},...p!==void 0&&{condition:p},...c!==void 0&&{skipCondition:c},...g!==void 0&&{timeout:g},...$!==void 0&&{retry:$},...b!==void 0&&{rollback:b},...R!==void 0&&{continueOnFailure:R},...S!==void 0&&{approval:S}};t.push(C)}return w(t)}validateCondition(r,t){if(!r||typeof r!="object"||Array.isArray(r))return u(new Error(`${t}: must be an object with path, operator, value`));let n=r;return!n.path||typeof n.path!="string"?u(new Error(`${t}: missing or invalid 'path' (string)`)):!n.operator||typeof n.operator!="string"?u(new Error(`${t}: missing or invalid 'operator' (string)`)):E.includes(n.operator)?n.value===void 0?u(new Error(`${t}: missing 'value'`)):w({path:n.path,operator:n.operator,value:n.value}):u(new Error(`${t}: invalid operator '${n.operator}'. 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Run "aqe fleet init" first.')),await r(1);return}let l=A(o),d=e.vars?h(e.vars):void 0;console.log(s.blue(`
+import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.31");process.exit(0)}
+import{a as y,b as w,c as u}from"./chunk-IRRGUXAU.js";import"./chunk-BMS7WFDB.js";import{Command as O}from"commander";import{resolve as A}from"path";import s from"chalk";import*as M from"node:fs/promises";import{parse as W}from"yaml";var E=["eq","neq","gt","gte","lt","lte","contains","exists"],D=["sequential","parallel"],N=/\$\{([^}]+)\}/g,k=class{parse(r,t){try{let n=this.interpolateVariables(r,t??{}),a=W(n);return this.validateAndConvert(a)}catch(n){return u(n instanceof Error?new Error(`YAML parse error: ${n.message}`):new Error(`YAML parse error: ${String(n)}`))}}async loadFromFile(r,t){try{let n=await M.readFile(r,"utf-8");return this.parse(n,t)}catch(n){return u(n instanceof Error?new Error(`Failed to read pipeline file '${r}': ${n.message}`):new Error(`Failed to read pipeline file '${r}': ${String(n)}`))}}interpolateVariables(r,t){return r.replace(N,(n,a)=>{let o=this.resolveVarPath(t,a);return o===void 0?n:String(o)})}validateSchema(r){return this.validateAndConvert(r)}validateAndConvert(r){if(!r||typeof r!="object"||Array.isArray(r))return u(new Error("YAML must parse to an object"));let t=r;if(!t.id||typeof t.id!="string")return u(new Error("Missing or invalid required field 'id' (string)"));if(!t.name||typeof t.name!="string")return u(new Error("Missing or invalid required field 'name' (string)"));if(!t.steps||!Array.isArray(t.steps)||t.steps.length===0)return u(new Error("'steps' must be a non-empty array"));let n=typeof t.description=="string"?t.description:"",a=typeof t.version=="string"?t.version:"1.0.0",o;if(t.defaultMode!==void 0){if(!D.includes(t.defaultMode))return u(new Error(`Invalid defaultMode '${String(t.defaultMode)}'. 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package/dist/cli/chunks/{platform-6FY6335Y.js → platform-2ULHQQME.js}

@@ -1,2 +1,2 @@
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valid`)):(console.log(o.yellow(`  ${n.name} configuration has issues`)),console.log(o.gray(`  Run "aqe platform setup ${e}" to fix`))),console.log("")}),s}function R(s){return s.charAt(0).toUpperCase()+s.slice(1)}var V=j;export{j as createPlatformCommand,V as default};
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installer factory for ${e}`)),process.exit(1));let g=await a({projectRoot:n,overwrite:t.overwrite}).install();if(g.success)console.log(o.green(`  ${r.name} configured successfully`)),g.mcpConfigured&&console.log(o.gray(`    MCP config: ${r.configPath}`)),g.rulesInstalled&&console.log(o.gray(`    Rules: ${r.rulesPath}`));else if(console.log(o.red(`  ${r.name} setup failed`)),g.errors)for(let i of g.errors)console.log(o.red(`    ${i}`))}catch(l){console.log(o.red(`  Failed to set up ${r.name}: ${y(l)}`))}console.log("")}),s.command("verify <name>").description("Verify a platform configuration is correct").action(async e=>{let t=process.cwd();h(e)||(console.log(""),console.log(o.red(`  Unknown platform: ${e}`)),console.log(o.gray(`  Valid platforms: ${p.join(", ")}`)),console.log(""),process.exit(1));let n=u[e];console.log(""),console.log(o.bold.blue(`  Verifying ${n.name}`)),console.log(o.gray("  \u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500\u2500")),console.log("");let r=!0,l=m.join(t,n.configPath);if(d(l)?console.log(o.green(`  [pass] Config file exists: ${n.configPath}`)):(console.log(o.red(`  [fail] Config file missing: ${n.configPath}`)),r=!1),d(l)){let c=E(l,n.configFormat);c.valid?console.log(o.green(`  [pass] Config file is valid ${n.configFormat.toUpperCase()}`)):(console.log(o.red(`  [fail] Config file is invalid: ${c.error}`)),r=!1),I(l,n)?console.log(o.green("  [pass] Config contains agentic-qe entry")):(console.log(o.red("  [fail] Config does not contain agentic-qe entry")),r=!1)}let f=m.join(t,n.rulesPath);d(f)?console.log(o.green(`  [pass] Rules file exists: ${n.rulesPath}`)):(console.log(o.red(`  [fail] Rules file missing: ${n.rulesPath}`)),r=!1),console.log(""),r?console.log(o.green(`  ${n.name} configuration is valid`)):(console.log(o.yellow(`  ${n.name} configuration has issues`)),console.log(o.gray(`  Run "aqe platform setup ${e}" to fix`))),console.log("")}),s}function R(s){return s.charAt(0).toUpperCase()+s.slice(1)}var V=j;export{j as createPlatformCommand,V as default};

package/dist/cli/chunks/{plugin-F23VOSIL.js → plugin-PYN2KOXA.js}

@@ -1,5 +1,5 @@
-import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.29");process.exit(0)}
-import{a as p,b as d,c as h}from"./chunk-UKYPDNQR.js";import"./chunk-YCK464TF.js";import{Command as _}from"commander";import*as g from"path";import{execFileSync as v}from"child_process";var $=/^[a-zA-Z0-9._-]+\/[a-zA-Z0-9._-]+$/,w=/^[a-zA-Z0-9._\-/]+$/;function E(i,n){if(!$.test(i))throw new Error(`Invalid GitHub repo "${i}": must be owner/repo with alphanumeric, dots, hyphens, underscores only`);if(n&&!w.test(n))throw new Error(`Invalid tag "${n}": must be alphanumeric with dots, hyphens, underscores, slashes only`)}var u=class{type="github";cacheDir;constructor(n){this.cacheDir=n??g.join(process.cwd(),".agentic-qe","plugins-cache")}async resolve(n){let e=await this.getPluginPath(n),t=g.join(e,"qe-plugin.json"),o=await import("fs");if(!o.existsSync(t))throw new Error(`No qe-plugin.json found in ${n}`);let r=o.readFileSync(t,"utf-8");return p(r)}async getPluginPath(n){let{repo:e,tag:t}=this.parseLocation(n);E(e,t);let o=g.join(this.cacheDir,e.replace("/","__"),t||"latest"),r=await import("fs");if(r.existsSync(o))return o;r.mkdirSync(o,{recursive:!0});try{let a=`https://github.com/${e}.git`,c=["clone","--depth","1"];t&&c.push("--branch",t),c.push(a,o),v("git",c,{stdio:"pipe",timeout:6e4})}catch(a){throw r.rmSync(o,{recursive:!0,force:!0}),new Error(`Failed to clone ${e}: ${a instanceof Error?a.message:String(a)}`)}return o}parseLocation(n){let[e,t]=n.split("@");if(!e||!e.includes("/"))throw new Error(`Invalid GitHub location "${n}". Expected "owner/repo" or "owner/repo@tag"`);return{repo:e,tag:t}}};import*as l from"path";import*as s from"fs";import{execFileSync as y}from"child_process";var P=/^(@[a-zA-Z0-9._-]+\/)?[a-zA-Z0-9._-]+$/,S=/^[a-zA-Z0-9._\-+]+$/;function x(i,n){if(!P.test(i))throw new Error(`Invalid npm package name "${i}": contains unsafe characters`);if(n&&!S.test(n))throw new Error(`Invalid version "${n}": contains unsafe characters`)}var m=class{type="npm";cacheDir;constructor(n){this.cacheDir=n??l.join(process.cwd(),".agentic-qe","plugins-cache","npm")}async resolve(n){let e=await this.getPluginPath(n),t=l.join(e,"qe-plugin.json");if(!s.existsSync(t))throw new Error(`No qe-plugin.json found in npm package ${n}`);let o=s.readFileSync(t,"utf-8");return p(o)}async getPluginPath(n){let{name:e,version:t}=this.parseLocation(n);x(e,t);let o=e.replace(/\//g,"__"),r=l.join(this.cacheDir,`${o}@${t||"latest"}`);if(s.existsSync(r)&&s.readdirSync(r).length>0)return r;s.mkdirSync(r,{recursive:!0});try{let a=t?`${e}@${t}`:e,c=y("npm",["pack",a,"--pack-destination",r],{stdio:"pipe",timeout:6e4}).toString().trim(),f=l.join(r,c);y("tar",["-xzf",f,"-C",r,"--strip-components=1"],{stdio:"pipe"}),s.existsSync(f)&&s.unlinkSync(f)}catch(a){throw s.rmSync(r,{recursive:!0,force:!0}),new Error(`Failed to fetch npm package ${n}: ${a instanceof Error?a.message:String(a)}`)}return r}parseLocation(n){let e=n.lastIndexOf("@");return e>0?{name:n.slice(0,e),version:n.slice(e+1)||void 0}:{name:n}}};function N(){let i=I(),n=new _("plugin").description("Manage external QE domain plugins").addHelpText("after",`
+import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.31");process.exit(0)}
+import{a as p,b as d,c as h}from"./chunk-462MZLJB.js";import"./chunk-BMS7WFDB.js";import{Command as _}from"commander";import*as g from"path";import{execFileSync as v}from"child_process";var $=/^[a-zA-Z0-9._-]+\/[a-zA-Z0-9._-]+$/,w=/^[a-zA-Z0-9._\-/]+$/;function E(i,n){if(!$.test(i))throw new Error(`Invalid GitHub repo "${i}": must be owner/repo with alphanumeric, dots, hyphens, underscores only`);if(n&&!w.test(n))throw new Error(`Invalid tag "${n}": must be alphanumeric with dots, hyphens, underscores, slashes only`)}var u=class{type="github";cacheDir;constructor(n){this.cacheDir=n??g.join(process.cwd(),".agentic-qe","plugins-cache")}async resolve(n){let e=await this.getPluginPath(n),t=g.join(e,"qe-plugin.json"),o=await import("fs");if(!o.existsSync(t))throw new Error(`No qe-plugin.json found in ${n}`);let r=o.readFileSync(t,"utf-8");return p(r)}async getPluginPath(n){let{repo:e,tag:t}=this.parseLocation(n);E(e,t);let o=g.join(this.cacheDir,e.replace("/","__"),t||"latest"),r=await import("fs");if(r.existsSync(o))return o;r.mkdirSync(o,{recursive:!0});try{let a=`https://github.com/${e}.git`,c=["clone","--depth","1"];t&&c.push("--branch",t),c.push(a,o),v("git",c,{stdio:"pipe",timeout:6e4})}catch(a){throw r.rmSync(o,{recursive:!0,force:!0}),new Error(`Failed to clone ${e}: ${a instanceof Error?a.message:String(a)}`)}return o}parseLocation(n){let[e,t]=n.split("@");if(!e||!e.includes("/"))throw new Error(`Invalid GitHub location "${n}". Expected "owner/repo" or "owner/repo@tag"`);return{repo:e,tag:t}}};import*as l from"path";import*as s from"fs";import{execFileSync as y}from"child_process";var P=/^(@[a-zA-Z0-9._-]+\/)?[a-zA-Z0-9._-]+$/,S=/^[a-zA-Z0-9._\-+]+$/;function x(i,n){if(!P.test(i))throw new Error(`Invalid npm package name "${i}": contains unsafe characters`);if(n&&!S.test(n))throw new Error(`Invalid version "${n}": contains unsafe characters`)}var m=class{type="npm";cacheDir;constructor(n){this.cacheDir=n??l.join(process.cwd(),".agentic-qe","plugins-cache","npm")}async resolve(n){let e=await this.getPluginPath(n),t=l.join(e,"qe-plugin.json");if(!s.existsSync(t))throw new Error(`No qe-plugin.json found in npm package ${n}`);let o=s.readFileSync(t,"utf-8");return p(o)}async getPluginPath(n){let{name:e,version:t}=this.parseLocation(n);x(e,t);let o=e.replace(/\//g,"__"),r=l.join(this.cacheDir,`${o}@${t||"latest"}`);if(s.existsSync(r)&&s.readdirSync(r).length>0)return r;s.mkdirSync(r,{recursive:!0});try{let a=t?`${e}@${t}`:e,c=y("npm",["pack",a,"--pack-destination",r],{stdio:"pipe",timeout:6e4}).toString().trim(),f=l.join(r,c);y("tar",["-xzf",f,"-C",r,"--strip-components=1"],{stdio:"pipe"}),s.existsSync(f)&&s.unlinkSync(f)}catch(a){throw s.rmSync(r,{recursive:!0,force:!0}),new Error(`Failed to fetch npm package ${n}: ${a instanceof Error?a.message:String(a)}`)}return r}parseLocation(n){let e=n.lastIndexOf("@");return e>0?{name:n.slice(0,e),version:n.slice(e+1)||void 0}:{name:n}}};function N(){let i=I(),n=new _("plugin").description("Manage external QE domain plugins").addHelpText("after",`
 Examples:
   aqe plugin install ./my-plugin          Install from local directory
   aqe plugin install owner/repo --source github   Install from GitHub

package/dist/cli/chunks/{prime-radiant-advanced-wasm-LL7WPCNW.js → prime-radiant-advanced-wasm-IULCTOGZ.js}

@@ -1,2 +1,2 @@
-import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.29");process.exit(0)}
-import"./chunk-YCK464TF.js";import{createRequire as t}from"module";var n=t(import.meta.url),e=n("prime-radiant-advanced-wasm"),r=e,{RuvectorLayer:i,TensorCompress:a,differentiableSearch:c,hierarchicalForward:p,getCompressionLevel:s,init:d,FlashAttention:l,DotProductAttention:m,MultiHeadAttention:u,HyperbolicAttention:A,LinearAttention:f,MoEAttention:h,SonaEngine:_,pipeline:v}=e||{};export{m as DotProductAttention,l as FlashAttention,A as HyperbolicAttention,f as LinearAttention,h as MoEAttention,u as MultiHeadAttention,i as RuvectorLayer,_ as SonaEngine,a as TensorCompress,r as default,c as differentiableSearch,s as getCompressionLevel,p as hierarchicalForward,d as init,v as pipeline};
+import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.31");process.exit(0)}
+import"./chunk-BMS7WFDB.js";import{createRequire as t}from"module";var n=t(import.meta.url),e=n("prime-radiant-advanced-wasm"),r=e,{RuvectorLayer:i,TensorCompress:a,differentiableSearch:c,hierarchicalForward:p,getCompressionLevel:s,init:d,FlashAttention:l,DotProductAttention:m,MultiHeadAttention:u,HyperbolicAttention:A,LinearAttention:f,MoEAttention:h,SonaEngine:_,pipeline:v}=e||{};export{m as DotProductAttention,l as FlashAttention,A as HyperbolicAttention,f as LinearAttention,h as MoEAttention,u as MultiHeadAttention,i as RuvectorLayer,_ as SonaEngine,a as TensorCompress,r as default,c as differentiableSearch,s as getCompressionLevel,p as hierarchicalForward,d as init,v as pipeline};

package/dist/cli/chunks/protocol-executor-D56OYMCJ.js

@@ -0,0 +1,2 @@
+import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.31");process.exit(0)}
+import{a,b}from"./chunk-35SFAIXE.js";import"./chunk-7V7TP242.js";import"./chunk-52D3CYE5.js";import"./chunk-IRRGUXAU.js";import"./chunk-K6MFAVXK.js";import"./chunk-GQFAVT2I.js";import"./chunk-BMS7WFDB.js";export{a as DefaultProtocolExecutor,b as createProtocolExecutor};

package/dist/cli/chunks/{protocol-handler-JWPPGEUR.js → protocol-handler-FZYI2SBP.js}

@@ -1,5 +1,5 @@
-import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.29");process.exit(0)}
-import"./chunk-HHDPHHTX.js";import{c as i}from"./chunk-CZEQFAKE.js";import"./chunk-YCK464TF.js";import n from"chalk";var a=class{name="protocol";description="Execute coordination protocols";cleanupAndExit;ensureInitialized;constructor(o,e){this.cleanupAndExit=o,this.ensureInitialized=e}register(o,e){o.command("protocol").description(this.description).command("run <protocolId>").description("Execute a protocol").option("--params <json>","Protocol parameters as JSON","{}").action(async(r,t)=>{await this.executeRun(r,t,e)})}async executeRun(o,e,c){if(await this.ensureInitialized())try{let r=i(e.params,"params");console.log(n.blue(`
+import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.31");process.exit(0)}
+import"./chunk-VUL5HIKR.js";import{c as i}from"./chunk-WB6TI6Q3.js";import"./chunk-BMS7WFDB.js";import n from"chalk";var a=class{name="protocol";description="Execute coordination protocols";cleanupAndExit;ensureInitialized;constructor(o,e){this.cleanupAndExit=o,this.ensureInitialized=e}register(o,e){o.command("protocol").description(this.description).command("run <protocolId>").description("Execute a protocol").option("--params <json>","Protocol parameters as JSON","{}").action(async(r,t)=>{await this.executeRun(r,t,e)})}async executeRun(o,e,c){if(await this.ensureInitialized())try{let r=i(e.params,"params");console.log(n.blue(`
   Executing protocol: ${o}
 `));let t=await c.queen.executeProtocol(o,r);t.success?(console.log(n.green("  Protocol execution started")),console.log(n.cyan(`   Execution ID: ${t.value}`))):console.log(n.red(`  Failed to execute protocol: ${t.error.message}`)),console.log("")}catch(r){console.error(n.red(`
   Failed to execute protocol:`),r),await this.cleanupAndExit(1)}}getHelp(){return`

package/dist/cli/chunks/{prove-S4PD63BK.js → prove-DN7S74SP.js}

@@ -1,3 +1,3 @@
-import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.29");process.exit(0)}
-import"./chunk-YCK464TF.js";import{Command as l}from"commander";import*as c from"crypto";import*as n from"fs";import*as r from"path";function m(t){let e=JSON.stringify(t,null,0);return c.createHash("sha256").update(e).digest("hex")}async function d(t){let e={testCount:0,passRate:0,coveragePercent:0,vulnerabilities:0,qualityScore:0,patternsUsed:0};try{let a=r.join(t,"junit.xml");if(n.existsSync(a)){let o=n.readFileSync(a,"utf-8"),s=o.match(/tests="(\d+)"/),i=o.match(/failures="(\d+)"/);if(s){e.testCount=parseInt(s[1],10);let u=i?parseInt(i[1],10):0;e.passRate=e.testCount>0?(e.testCount-u)/e.testCount*100:0}}}catch{}try{let a=r.join(t,"coverage","coverage-summary.json");if(n.existsSync(a)){let o=JSON.parse(n.readFileSync(a,"utf-8"));e.coveragePercent=o?.total?.lines?.pct??0}}catch{}try{let a=r.join(t,".agentic-qe","memory.db");n.existsSync(a)&&(e.patternsUsed=1)}catch{}return e.qualityScore=Math.round(e.passRate*.4+e.coveragePercent*.3+(e.vulnerabilities===0?100:Math.max(0,100-e.vulnerabilities*10))*.3),e}function y(t,e){let a={version:"1.0.0",timestamp:new Date().toISOString(),projectRoot:t,attestation:{testsExecuted:e.testCount>0,coverageChecked:e.coveragePercent>0,securityScanned:e.vulnerabilities===0,qualityGatePassed:e.qualityScore>=70},metrics:e,generatedBy:"agentic-qe prove"},o=m(a);return{...a,hash:o}}function f(t){return["# Proof of Quality","",`**Generated:** ${t.timestamp}`,`**Project:** ${t.projectRoot}`,`**Hash:** \`${t.hash}\``,"","## Attestation","","| Check | Status |","|-------|--------|",`| Tests Executed | ${t.attestation.testsExecuted?"PASS":"FAIL"} |`,`| Coverage Checked | ${t.attestation.coverageChecked?"PASS":"FAIL"} |`,`| Security Scanned | ${t.attestation.securityScanned?"PASS":"FAIL"} |`,`| Quality Gate | ${t.attestation.qualityGatePassed?"PASSED":"FAILED"} |`,"","## Metrics","","| Metric | Value |","|--------|-------|",`| Tests | ${t.metrics.testCount} |`,`| Pass Rate | ${t.metrics.passRate.toFixed(1)}% |`,`| Coverage | ${t.metrics.coveragePercent.toFixed(1)}% |`,`| Vulnerabilities | ${t.metrics.vulnerabilities} |`,`| Quality Score | ${t.metrics.qualityScore}/100 |`,"","---",`*${t.generatedBy}*`].join(`
+import{createRequire as __cr}from"module";const require=__cr(import.meta.url);if(process.argv.includes('--version')||process.argv.includes('-v')){console.log("3.9.31");process.exit(0)}
+import"./chunk-BMS7WFDB.js";import{Command as l}from"commander";import*as c from"crypto";import*as n from"fs";import*as r from"path";function m(t){let e=JSON.stringify(t,null,0);return c.createHash("sha256").update(e).digest("hex")}async function d(t){let e={testCount:0,passRate:0,coveragePercent:0,vulnerabilities:0,qualityScore:0,patternsUsed:0};try{let a=r.join(t,"junit.xml");if(n.existsSync(a)){let o=n.readFileSync(a,"utf-8"),s=o.match(/tests="(\d+)"/),i=o.match(/failures="(\d+)"/);if(s){e.testCount=parseInt(s[1],10);let u=i?parseInt(i[1],10):0;e.passRate=e.testCount>0?(e.testCount-u)/e.testCount*100:0}}}catch{}try{let a=r.join(t,"coverage","coverage-summary.json");if(n.existsSync(a)){let o=JSON.parse(n.readFileSync(a,"utf-8"));e.coveragePercent=o?.total?.lines?.pct??0}}catch{}try{let a=r.join(t,".agentic-qe","memory.db");n.existsSync(a)&&(e.patternsUsed=1)}catch{}return e.qualityScore=Math.round(e.passRate*.4+e.coveragePercent*.3+(e.vulnerabilities===0?100:Math.max(0,100-e.vulnerabilities*10))*.3),e}function y(t,e){let a={version:"1.0.0",timestamp:new Date().toISOString(),projectRoot:t,attestation:{testsExecuted:e.testCount>0,coverageChecked:e.coveragePercent>0,securityScanned:e.vulnerabilities===0,qualityGatePassed:e.qualityScore>=70},metrics:e,generatedBy:"agentic-qe prove"},o=m(a);return{...a,hash:o}}function f(t){return["# Proof of Quality","",`**Generated:** ${t.timestamp}`,`**Project:** ${t.projectRoot}`,`**Hash:** \`${t.hash}\``,"","## Attestation","","| Check | Status |","|-------|--------|",`| Tests Executed | ${t.attestation.testsExecuted?"PASS":"FAIL"} |`,`| Coverage Checked | ${t.attestation.coverageChecked?"PASS":"FAIL"} |`,`| Security Scanned | ${t.attestation.securityScanned?"PASS":"FAIL"} |`,`| Quality Gate | ${t.attestation.qualityGatePassed?"PASSED":"FAILED"} |`,"","## Metrics","","| Metric | Value |","|--------|-------|",`| Tests | ${t.metrics.testCount} |`,`| Pass Rate | ${t.metrics.passRate.toFixed(1)}% |`,`| Coverage | ${t.metrics.coveragePercent.toFixed(1)}% |`,`| Vulnerabilities | ${t.metrics.vulnerabilities} |`,`| Quality Score | ${t.metrics.qualityScore}/100 |`,"","---",`*${t.generatedBy}*`].join(`
 `)}async function p(t){let e=t.projectRoot??process.cwd(),a=await d(e),o=y(e,a),s=t.format==="markdown"?f(o):JSON.stringify(o,null,2);return t.output?(n.writeFileSync(t.output,s),console.log(`Quality attestation written to ${t.output}`)):console.log(s),o}function g(t,e,a){return new l("prove").description("Generate a verifiable Proof-of-Quality attestation").option("-F, --format <format>","Output format (json|markdown)","json").option("-o, --output <path>","Write attestation to file").action(async o=>{try{await p({format:o.format,output:o.output}),await e(0)}catch(s){console.error("Failed to generate proof-of-quality:",s),await e(1)}})}export{y as buildAttestation,d as collectMetrics,g as createProveCommand,f as formatMarkdown,p as handleProve,m as hashAttestation};