npm - agentic-qe - Versions diffs - 3.6.10 → 3.6.11 - Mend

agentic-qe 3.6.10 → 3.6.11

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (71) hide show

package/v3/dist/domains/code-intelligence/services/metric-collector/loc-counter.js CHANGED Viewed

@@ -12,7 +12,7 @@
  * @see docs/plans/AQE_V3_IMPROVEMENTS_PLAN.md - Phase 5, RM-002
  */
 import { execSync, spawnSync } from 'child_process';
-import { existsSync, readdirSync, readFileSync } from 'fs';
+import { existsSync, readdirSync, readFileSync, statSync } from 'fs';
 import { join, extname } from 'path';
 import { DEFAULT_METRIC_CONFIG, } from './interfaces.js';
 import { safeJsonParse } from '@shared/safe-json.js';
@@ -220,29 +220,53 @@ function getLanguageForExtension(ext) {
     return null;
 }
 /**
- * Manual line counting fallback
+ * Node.js-native line counting — reads files and counts non-blank, non-comment lines.
+ * This is accurate (not an estimate) and requires no external tools.
+ *
+ * Fix #281: Renamed from 'fallback' to 'node-native' to distinguish from
+ * any heuristic/estimation approach. Uses readFileSync on every source file
+ * with proper comment stripping per language.
  */
 function manualLOCCount(projectPath, config) {
     const byLanguage = {};
     let total = 0;
-    function walkDirectory(dirPath) {
-        if (!existsSync(dirPath)) {
+    const excludeSet = new Set(config.excludeDirs);
+    // Max file size to read (2MB) — skip minified bundles, generated files
+    const MAX_FILE_SIZE = 2 * 1024 * 1024;
+    function walkDirectory(dirPath, depth) {
+        if (!existsSync(dirPath) || depth > 20) {
+            return;
+        }
+        let entries;
+        try {
+            entries = readdirSync(dirPath, { withFileTypes: true });
+        }
+        catch {
+            // Permission denied or other FS error — skip
             return;
         }
-        const entries = readdirSync(dirPath, { withFileTypes: true });
         for (const entry of entries) {
             const fullPath = join(dirPath, entry.name);
             if (entry.isDirectory()) {
-                // Skip excluded directories
-                if (config.excludeDirs.includes(entry.name)) {
+                // Skip excluded directories (exact match or glob-like suffix match)
+                if (excludeSet.has(entry.name) || entry.name.startsWith('.')) {
                     continue;
                 }
-                walkDirectory(fullPath);
+                walkDirectory(fullPath, depth + 1);
             }
             else if (entry.isFile()) {
                 const ext = extname(entry.name);
                 const language = getLanguageForExtension(ext);
                 if (language) {
+                    // Skip files that are too large (likely generated/minified)
+                    try {
+                        const stat = statSync(fullPath);
+                        if (stat.size > MAX_FILE_SIZE)
+                            continue;
+                    }
+                    catch {
+                        continue;
+                    }
                     const lines = countFileLines(fullPath);
                     byLanguage[language] = (byLanguage[language] || 0) + lines;
                     total += lines;
@@ -250,11 +274,11 @@ function manualLOCCount(projectPath, config) {
             }
         }
     }
-    walkDirectory(projectPath);
+    walkDirectory(projectPath, 0);
     return {
         total,
         byLanguage,
-        source: 'fallback',
+        source: 'node-native',
         excludedDirs: config.excludeDirs,
     };
 }

package/v3/dist/domains/code-intelligence/services/metric-collector/loc-counter.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/v3/dist/domains/coverage-analysis/services/hnsw-index.d.ts CHANGED Viewed

@@ -246,7 +246,16 @@ export declare class HNSWIndex implements IHNSWIndex {
      * Clear all entries in the index.
      */
     clear(): Promise<void>;
+    /**
+     * Validate and auto-resize vectors to match HNSW configured dimensions.
+     * Fix #279: Prevents Rust WASM panic when RealEmbeddings (768-dim) are
+     * passed to a 128-dim HNSW index.
+     */
     private validateVector;
+    /**
+     * Resize vector to target dimensions using averaging (shrink) or zero-padding (grow).
+     */
+    private resizeVector;
     private buildKey;
     /**
      * Convert a plain vector to IEmbedding format for @ruvector/gnn.

package/v3/dist/domains/coverage-analysis/services/hnsw-index.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/v3/dist/domains/coverage-analysis/services/hnsw-index.js CHANGED Viewed

@@ -153,7 +153,7 @@ export class HNSWIndex {
         if (!this.initialized) {
             await this.initialize();
         }
-        this.validateVector(vector);
+        vector = this.validateVector(vector);
         // Check for duplicate
         if (this.keyToLabel.has(key)) {
             // Update existing - remove old and re-add
@@ -193,7 +193,7 @@ export class HNSWIndex {
         if (!this.initialized) {
             await this.initialize();
         }
-        this.validateVector(query);
+        query = this.validateVector(query);
         const startTime = performance.now();
         // Use @ruvector/gnn differentiable search
         const results = this.stats.vectorCount > 0
@@ -328,15 +328,50 @@ export class HNSWIndex {
     // ============================================================================
     // Private Helper Methods
     // ============================================================================
+    /**
+     * Validate and auto-resize vectors to match HNSW configured dimensions.
+     * Fix #279: Prevents Rust WASM panic when RealEmbeddings (768-dim) are
+     * passed to a 128-dim HNSW index.
+     */
     validateVector(vector) {
+        // Auto-resize if dimensions don't match
         if (vector.length !== this.config.dimensions) {
-            throw new Error(`Vector dimension mismatch: expected ${this.config.dimensions}, got ${vector.length}`);
+            return this.resizeVector(vector, this.config.dimensions);
         }
         for (let i = 0; i < vector.length; i++) {
             if (!Number.isFinite(vector[i])) {
                 throw new Error(`Invalid vector value at index ${i}: ${vector[i]}`);
             }
         }
+        return vector;
+    }
+    /**
+     * Resize vector to target dimensions using averaging (shrink) or zero-padding (grow).
+     */
+    resizeVector(vector, targetDim) {
+        if (vector.length === targetDim)
+            return vector;
+        if (vector.length > targetDim) {
+            // Shrink: average adjacent values to preserve information
+            const result = new Array(targetDim).fill(0);
+            const ratio = vector.length / targetDim;
+            for (let i = 0; i < targetDim; i++) {
+                const start = Math.floor(i * ratio);
+                const end = Math.floor((i + 1) * ratio);
+                let sum = 0;
+                for (let j = start; j < end; j++) {
+                    sum += vector[j];
+                }
+                result[i] = sum / (end - start);
+            }
+            return result;
+        }
+        // Grow: zero-pad
+        const result = new Array(targetDim).fill(0);
+        for (let i = 0; i < vector.length; i++) {
+            result[i] = vector[i];
+        }
+        return result;
     }
     buildKey(key) {
         return `${this.config.namespace}:${key}`;

package/v3/dist/domains/coverage-analysis/services/hnsw-index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/v3/dist/init/init-wizard-hooks.d.ts CHANGED Viewed

@@ -3,12 +3,19 @@
  *
  * Contains hook configuration, MCP server setup, and CLAUDE.md generation
  * logic used during AQE initialization. Extracted from init-wizard.ts.
+ *
+ * Uses shared settings-merge utilities to:
+ * - Detect and replace existing AQE hooks (no duplicates)
+ * - Preserve non-AQE hooks from the user's config
+ * - Add full env vars and v3 settings sections
  */
 import type { AQEInitConfig } from './types.js';
 /**
  * Configure Claude Code hooks.
  * Creates or updates .claude/settings.json with AQE hooks.
- * Uses Claude Code's actual environment variables ($TOOL_INPUT_*, $TOOL_SUCCESS, etc.)
+ *
+ * Smart merge: detects existing AQE/agentic-qe hooks and replaces them
+ * instead of appending duplicates. Non-AQE hooks are preserved.
  */
 export declare function configureHooks(projectRoot: string, config: AQEInitConfig): Promise<boolean>;
 /**

package/v3/dist/init/init-wizard-hooks.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"init-wizard-hooks.d.ts","sourceRoot":"","sources":["../../src/init/init-wizard-hooks.ts"],"names":[],"mappings":"AAAA~~;;;;;GAKG~~;~~AAMH~~,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AAMhD~~;;;;GAIG~~;AACH,wBAAsB,cAAc,CAAC,WAAW,EAAE,MAAM,EAAE,MAAM,EAAE,aAAa,GAAG,OAAO,CAAC,OAAO,CAAC,~~CAmLjG~~;AAsED;;;;GAIG;AACH,wBAAsB,YAAY,CAAC,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAoCxE;AAMD;;;;GAIG;AACH,wBAAsB,gBAAgB,CAAC,WAAW,EAAE,MAAM,EAAE,MAAM,EAAE,aAAa,GAAG,OAAO,CAAC,OAAO,CAAC,CAmBnG"}
1	+ {"version":3,"file":"init-wizard-hooks.d.ts","sourceRoot":"","sources":["../../src/init/init-wizard-hooks.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAWH,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AAMhD;;;;;;GAMG;AACH,wBAAsB,cAAc,CAAC,WAAW,EAAE,MAAM,EAAE,MAAM,EAAE,aAAa,GAAG,OAAO,CAAC,OAAO,CAAC,CAgLjG;AAsED;;;;GAIG;AACH,wBAAsB,YAAY,CAAC,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAoCxE;AAMD;;;;GAIG;AACH,wBAAsB,gBAAgB,CAAC,WAAW,EAAE,MAAM,EAAE,MAAM,EAAE,aAAa,GAAG,OAAO,CAAC,OAAO,CAAC,CAmBnG"}

package/v3/dist/init/init-wizard-hooks.js CHANGED Viewed

@@ -3,17 +3,25 @@
  *
  * Contains hook configuration, MCP server setup, and CLAUDE.md generation
  * logic used during AQE initialization. Extracted from init-wizard.ts.
+ *
+ * Uses shared settings-merge utilities to:
+ * - Detect and replace existing AQE hooks (no duplicates)
+ * - Preserve non-AQE hooks from the user's config
+ * - Add full env vars and v3 settings sections
  */
 import { existsSync, mkdirSync, writeFileSync, readFileSync, copyFileSync } from 'fs';
 import { join, dirname } from 'path';
 import { safeJsonParse } from '../shared/safe-json.js';
+import { mergeHooksSmart, generateAqeEnvVars, generateV3SettingsSections, } from './settings-merge.js';
 // ============================================================================
 // Hook Configuration
 // ============================================================================
 /**
  * Configure Claude Code hooks.
  * Creates or updates .claude/settings.json with AQE hooks.
- * Uses Claude Code's actual environment variables ($TOOL_INPUT_*, $TOOL_SUCCESS, etc.)
+ *
+ * Smart merge: detects existing AQE/agentic-qe hooks and replaces them
+ * instead of appending duplicates. Non-AQE hooks are preserved.
  */
 export async function configureHooks(projectRoot, config) {
     if (!config.hooks.claudeCode) {
@@ -36,15 +44,26 @@ export async function configureHooks(projectRoot, config) {
             settings = {};
         }
     }
-    // Configure hooks with Claude Code's actual environment variables
-    const hooks = {
+    // Generate new AQE hooks config
+    const aqeHooks = {
         PreToolUse: [
             {
                 matcher: '^(Write|Edit|MultiEdit)$',
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks pre-edit --file "$TOOL_INPUT_file_path"',
+                        command: 'npx agentic-qe hooks guard --file "$TOOL_INPUT_file_path" --json',
+                        timeout: 3000,
+                        continueOnError: true,
+                    },
+                ],
+            },
+            {
+                matcher: '^(Write|Edit|MultiEdit)$',
+                hooks: [
+                    {
+                        type: 'command',
+                        command: 'npx agentic-qe hooks pre-edit --file "$TOOL_INPUT_file_path" --json',
                         timeout: 5000,
                         continueOnError: true,
                     },
@@ -55,8 +74,8 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks pre-command --command "$TOOL_INPUT_command"',
-                        timeout: 5000,
+                        command: 'npx agentic-qe hooks pre-command --command "$TOOL_INPUT_command" --json',
+                        timeout: 3000,
                         continueOnError: true,
                     },
                 ],
@@ -66,7 +85,7 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks pre-task --description "$TOOL_INPUT_prompt"',
+                        command: 'npx agentic-qe hooks pre-task --description "$TOOL_INPUT_prompt" --json',
                         timeout: 5000,
                         continueOnError: true,
                     },
@@ -79,7 +98,7 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks post-edit --file "$TOOL_INPUT_file_path" --success "$TOOL_SUCCESS"',
+                        command: 'npx agentic-qe hooks post-edit --file "$TOOL_INPUT_file_path" --success --json',
                         timeout: 5000,
                         continueOnError: true,
                     },
@@ -90,7 +109,7 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks post-command --command "$TOOL_INPUT_command" --success "$TOOL_SUCCESS"',
+                        command: 'npx agentic-qe hooks post-command --command "$TOOL_INPUT_command" --success --json',
                         timeout: 5000,
                         continueOnError: true,
                     },
@@ -101,7 +120,7 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks post-task --task-id "$TOOL_RESULT_agent_id" --success "$TOOL_SUCCESS"',
+                        command: 'npx agentic-qe hooks post-task --task-id "$TOOL_RESULT_agent_id" --success --json',
                         timeout: 5000,
                         continueOnError: true,
                     },
@@ -113,7 +132,7 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks route --task "$PROMPT"',
+                        command: 'npx agentic-qe hooks route --task "$PROMPT" --json',
                         timeout: 5000,
                         continueOnError: true,
                     },
@@ -125,7 +144,7 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks session-start --session-id "$SESSION_ID"',
+                        command: 'npx agentic-qe hooks session-start --session-id "$SESSION_ID" --json',
                         timeout: 10000,
                         continueOnError: true,
                     },
@@ -137,7 +156,7 @@ export async function configureHooks(projectRoot, config) {
                 hooks: [
                     {
                         type: 'command',
-                        command: 'aqe hooks session-end --save-state',
+                        command: 'npx agentic-qe hooks session-end --save-state --json',
                         timeout: 5000,
                         continueOnError: true,
                     },
@@ -145,38 +164,27 @@ export async function configureHooks(projectRoot, config) {
             },
         ],
     };
-    // Merge with existing settings (preserve existing hooks, add AQE hooks)
+    // Smart merge: replace old AQE hooks, keep user hooks, add new AQE hooks
     const existingHooks = settings.hooks || {};
-    const mergedHooks = {};
-    for (const [hookType, hookArray] of Object.entries(hooks)) {
-        const existing = existingHooks[hookType] || [];
-        mergedHooks[hookType] = [...existing, ...hookArray];
-    }
-    for (const [hookType, hookArray] of Object.entries(existingHooks)) {
-        if (!mergedHooks[hookType]) {
-            mergedHooks[hookType] = hookArray;
-        }
-    }
-    settings.hooks = mergedHooks;
-    // Add AQE environment variables
+    settings.hooks = mergeHooksSmart(existingHooks, aqeHooks);
+    // Set full AQE environment variables
     const existingEnv = settings.env || {};
     settings.env = {
         ...existingEnv,
-        AQE_MEMORY_PATH: '.agentic-qe/memory.db',
-        AQE_V3_MODE: 'true',
-        AQE_LEARNING_ENABLED: config.learning.enabled ? 'true' : 'false',
+        ...generateAqeEnvVars(config),
     };
-    // Add AQE metadata
-    settings.aqe = {
-        version: config.version,
-        initialized: new Date().toISOString(),
-        hooksConfigured: true,
-    };
-    // Add MCP server enablement
-    const existingMcp = settings.enabledMcpjsonServers || [];
-    if (!existingMcp.includes('aqe')) {
-        settings.enabledMcpjsonServers = [...existingMcp, 'aqe'];
+    // Apply v3 settings sections
+    const v3Sections = generateV3SettingsSections(config);
+    for (const [key, value] of Object.entries(v3Sections)) {
+        settings[key] = value;
+    }
+    // Enable MCP servers (deduplicate, replace old 'aqe' with 'agentic-qe')
+    let existingMcp = settings.enabledMcpjsonServers || [];
+    existingMcp = existingMcp.filter(s => s !== 'aqe');
+    if (!existingMcp.includes('agentic-qe')) {
+        existingMcp.push('agentic-qe');
     }
+    settings.enabledMcpjsonServers = existingMcp;
     writeFileSync(settingsPath, JSON.stringify(settings, null, 2), 'utf-8');
     // Install cross-phase memory hooks configuration
     await installCrossPhaseMemoryHooks(projectRoot);

package/v3/dist/init/init-wizard-hooks.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/v3/dist/init/phases/07-hooks.d.ts CHANGED Viewed

@@ -1,12 +1,18 @@
 /**
  * Phase 07: Hooks
- * Configures Claude Code hooks for learning integration
+ * Configures Claude Code hooks for learning integration.
+ *
+ * Smart merge strategy:
+ * - Detects existing AQE/agentic-qe hooks and REPLACES them (no duplicates)
+ * - Preserves any non-AQE hooks from the user's existing config
+ * - Adds full env vars and v3 settings sections
  */
 import { BasePhase, type InitContext } from './phase-interface.js';
 export interface HooksResult {
     configured: boolean;
     settingsPath: string;
     hookTypes: string[];
+    existingAqeDetected: boolean;
 }
 /**
  * Hooks phase - configures Claude Code hooks
@@ -19,6 +25,10 @@ export declare class HooksPhase extends BasePhase<HooksResult> {
     readonly requiresPhases: readonly ["configuration"];
     shouldRun(context: InitContext): Promise<boolean>;
     protected run(context: InitContext): Promise<HooksResult>;
+    /**
+     * Check if existing hooks contain any AQE/agentic-qe entries
+     */
+    private hasExistingAqeHooks;
     /**
      * Generate hooks configuration
      *

package/v3/dist/init/phases/07-hooks.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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