agentic-qe 3.3.4 → 3.3.5

package/v3/dist/mcp/bundle.js

@@ -218,6 +218,27 @@ ${HYPERGRAPH_INDEXES_SCHEMA}
 import Database from "better-sqlite3";
 import * as fs from "fs";
 import * as path from "path";
+function findProjectRoot(startDir = process.cwd()) {
+  let dir = startDir;
+  const root = path.parse(dir).root;
+  while (dir !== root) {
+    if (fs.existsSync(path.join(dir, "package.json")) || fs.existsSync(path.join(dir, ".git"))) {
+      return dir;
+    }
+    dir = path.dirname(dir);
+  }
+  return process.cwd();
+}
+function getDefaultDbPath() {
+  const projectRoot = findProjectRoot();
+  return path.join(projectRoot, ".agentic-qe", "memory.db");
+}
+function getResolvedDefaultConfig() {
+  return {
+    ...DEFAULT_UNIFIED_MEMORY_CONFIG,
+    dbPath: getDefaultDbPath()
+  };
+}
 function getUnifiedMemory(config) {
   return UnifiedMemoryManager.getInstance(config);
 }
@@ -256,7 +277,7 @@ var init_unified_memory = __esm({
     init_constants();
     DEFAULT_UNIFIED_MEMORY_CONFIG = {
       dbPath: ".agentic-qe/memory.db",
-      // <-- THE SINGLE SOURCE OF TRUTH
+      // Resolved to project root at runtime
       walMode: true,
       mmapSize: MEMORY_CONSTANTS.MMAP_SIZE_BYTES,
       cacheSize: MEMORY_CONSTANTS.CACHE_SIZE_KB,
@@ -791,7 +812,8 @@ var init_unified_memory = __esm({
       preparedStatements = /* @__PURE__ */ new Map();
       vectorIndex = new InMemoryHNSWIndex();
       constructor(config) {
-        this.config = { ...DEFAULT_UNIFIED_MEMORY_CONFIG, ...config };
+        const resolvedDefaults = getResolvedDefaultConfig();
+        this.config = { ...resolvedDefaults, ...config };
       }
       /**
        * Get or create the singleton instance (synchronous).
@@ -1768,7 +1790,7 @@ var init_claude_provider = __esm({
           defaultModel: config.defaultModel || "claude-3-5-sonnet-20241022",
           baseUrl: this.baseUrl,
           defaultTimeout: config.defaultTimeout || 3e4,
-          maxRetries: config.maxRetries || 3,
+          maxRetries: config.maxRetries ?? 3,
           retryDelayMs: config.retryDelayMs || 1e3,
           enableLogging: config.enableLogging || false
         };
@@ -2081,7 +2103,7 @@ var init_openai_provider = __esm({
           defaultModel: config.defaultModel || "gpt-4-turbo",
           baseUrl: this.baseUrl,
           defaultTimeout: config.defaultTimeout || CONSENSUS_CONSTANTS.MODEL_TIMEOUT_MS,
-          maxRetries: config.maxRetries || CONSENSUS_CONSTANTS.DEFAULT_RETRY_ATTEMPTS,
+          maxRetries: config.maxRetries ?? CONSENSUS_CONSTANTS.DEFAULT_RETRY_ATTEMPTS,
           retryDelayMs: config.retryDelayMs || CONSENSUS_CONSTANTS.DEFAULT_RETRY_DELAY_MS,
           enableLogging: config.enableLogging || false
         };
@@ -2331,7 +2353,7 @@ var init_gemini_provider = __esm({
           defaultModel: config.defaultModel || "gemini-1.5-pro-latest",
           baseUrl: this.baseUrl,
           defaultTimeout: config.defaultTimeout || 3e4,
-          maxRetries: config.maxRetries || 3,
+          maxRetries: config.maxRetries ?? 3,
           retryDelayMs: config.retryDelayMs || 1e3,
           enableLogging: config.enableLogging || false
         };
@@ -8408,7 +8430,7 @@ var init_transforms = __esm({
 
 // src/integrations/agentic-flow/pattern-loader.ts
 import { existsSync as existsSync10, readFileSync as readFileSync8 } from "node:fs";
-import { join as join12, dirname as dirname3 } from "node:path";
+import { join as join13, dirname as dirname3 } from "node:path";
 import { fileURLToPath } from "node:url";
 function getPatternLoader() {
   return PatternLoader.getInstance();
@@ -8472,10 +8494,10 @@ var init_pattern_loader = __esm({
           const currentFileUrl = import.meta.url;
           const currentFilePath = fileURLToPath(currentFileUrl);
           const currentDir = dirname3(currentFilePath);
-          const projectRoot = join12(currentDir, "..", "..", "..");
-          return join12(projectRoot, "assets", "patterns");
+          const projectRoot = join13(currentDir, "..", "..", "..");
+          return join13(projectRoot, "assets", "patterns");
         } catch {
-          return join12(process.cwd(), "assets", "patterns");
+          return join13(process.cwd(), "assets", "patterns");
         }
       }
       /**
@@ -8521,7 +8543,7 @@ var init_pattern_loader = __esm({
        * Load a JSON file from the patterns directory
        */
       loadJsonFile(filename) {
-        const filePath = join12(this.config.basePath, filename);
+        const filePath = join13(this.config.basePath, filename);
         try {
           if (!existsSync10(filePath)) {
             const errorMsg = `Pattern file not found: ${filePath}`;
@@ -38038,7 +38060,7 @@ var STRICT_VERIFICATION_TYPES = [
 
 // src/agents/claim-verifier/verifiers/file-verifier.ts
 import { readFile as readFile3, stat as stat2 } from "node:fs/promises";
-import { join as join2 } from "node:path";
+import { join as join3 } from "node:path";
 import fg from "fast-glob";
 var FileBasedVerifier = class {
   config;
@@ -38192,7 +38214,7 @@ var FileBasedVerifier = class {
     const evidence = [];
     let passed = 0;
     for (const filePath of filePaths) {
-      const fullPath = join2(this.config.rootDir, filePath);
+      const fullPath = join3(this.config.rootDir, filePath);
       try {
         const stats = await stat2(fullPath);
         const exists = stats.isFile();
@@ -38286,7 +38308,7 @@ var FileBasedVerifier = class {
     for (const ev of existingEvidence) {
       if (ev.type === "file-reference" || ev.type === "code-snippet") {
         const filePath = ev.location.split(":")[0];
-        const fullPath = join2(this.config.rootDir, filePath);
+        const fullPath = join3(this.config.rootDir, filePath);
         try {
           const stats = await stat2(fullPath);
           const exists = stats.isFile();
@@ -38335,7 +38357,7 @@ var FileBasedVerifier = class {
 import { exec as exec2 } from "node:child_process";
 import { promisify as promisify2 } from "node:util";
 import { readFile as readFile4 } from "node:fs/promises";
-import { join as join3 } from "node:path";
+import { join as join4 } from "node:path";
 var execAsync2 = promisify2(exec2);
 var TestBasedVerifier = class {
   config;
@@ -38623,7 +38645,7 @@ var TestBasedVerifier = class {
    * Get coverage data from report.
    */
   async getCoverageData() {
-    const reportPath = join3(this.config.rootDir, this.config.coverageReportPath);
+    const reportPath = join4(this.config.rootDir, this.config.coverageReportPath);
     const content = await readFile4(reportPath, "utf-8");
     const data = JSON.parse(content);
     const total = data.total || data;
@@ -52153,7 +52175,7 @@ init_wrappers();
 
 // src/domains/code-intelligence/services/metric-collector/index.ts
 import { existsSync as existsSync7, readFileSync as readFileSync6, readdirSync as readdirSync3 } from "fs";
-import { join as join7, extname as extname3 } from "path";
+import { join as join8, extname as extname3 } from "path";
 
 // src/domains/code-intelligence/services/metric-collector/interfaces.ts
 var DEFAULT_METRIC_CONFIG = {
@@ -52167,7 +52189,7 @@ var DEFAULT_METRIC_CONFIG = {
 // src/domains/code-intelligence/services/metric-collector/loc-counter.ts
 import { execSync as execSync4, spawnSync } from "child_process";
 import { existsSync as existsSync5, readdirSync, readFileSync as readFileSync4 } from "fs";
-import { join as join5, extname } from "path";
+import { join as join6, extname } from "path";
 async function countLOC(projectPath, config = {}) {
   const mergedConfig = { ...DEFAULT_METRIC_CONFIG, ...config };
   const clocResult = await tryClocCount(projectPath, mergedConfig);
@@ -52315,7 +52337,7 @@ function manualLOCCount(projectPath, config) {
     }
     const entries = readdirSync(dirPath, { withFileTypes: true });
     for (const entry of entries) {
-      const fullPath = join5(dirPath, entry.name);
+      const fullPath = join6(dirPath, entry.name);
       if (entry.isDirectory()) {
         if (config.excludeDirs.includes(entry.name)) {
           continue;
@@ -52515,7 +52537,7 @@ function getBlockCommentEnd(ext) {
 // src/domains/code-intelligence/services/metric-collector/test-counter.ts
 import { execSync as execSync5, spawnSync as spawnSync2 } from "child_process";
 import { existsSync as existsSync6, readFileSync as readFileSync5, readdirSync as readdirSync2 } from "fs";
-import { join as join6, extname as extname2 } from "path";
+import { join as join7, extname as extname2 } from "path";
 async function countTests(projectPath, config = {}) {
   const mergedConfig = { ...DEFAULT_METRIC_CONFIG, ...config };
   const runner = detectTestRunner(projectPath);
@@ -52535,7 +52557,7 @@ async function countTests(projectPath, config = {}) {
   }
 }
 function detectTestRunner(projectPath) {
-  const packageJsonPath = join6(projectPath, "package.json");
+  const packageJsonPath = join7(projectPath, "package.json");
   if (existsSync6(packageJsonPath)) {
     try {
       const pkg2 = JSON.parse(readFileSync5(packageJsonPath, "utf-8"));
@@ -52551,13 +52573,13 @@ function detectTestRunner(projectPath) {
     } catch {
     }
   }
-  if (existsSync6(join6(projectPath, "Cargo.toml"))) {
+  if (existsSync6(join7(projectPath, "Cargo.toml"))) {
     return "cargo";
   }
-  if (existsSync6(join6(projectPath, "pyproject.toml")) || existsSync6(join6(projectPath, "setup.py")) || existsSync6(join6(projectPath, "pytest.ini")) || existsSync6(join6(projectPath, "requirements.txt"))) {
+  if (existsSync6(join7(projectPath, "pyproject.toml")) || existsSync6(join7(projectPath, "setup.py")) || existsSync6(join7(projectPath, "pytest.ini")) || existsSync6(join7(projectPath, "requirements.txt"))) {
     return "pytest";
   }
-  if (existsSync6(join6(projectPath, "go.mod"))) {
+  if (existsSync6(join7(projectPath, "go.mod"))) {
     return "go";
   }
   return "fallback";
@@ -52832,7 +52854,7 @@ function countTestsByFilePattern(projectPath, config) {
     }
     const entries = readdirSync2(dirPath, { withFileTypes: true });
     for (const entry of entries) {
-      const fullPath = join6(dirPath, entry.name);
+      const fullPath = join7(dirPath, entry.name);
       if (entry.isDirectory()) {
         if (config.excludeDirs.includes(entry.name)) {
           continue;
@@ -52921,11 +52943,11 @@ function classifyTests(total, source, projectPath) {
   let unit = total;
   let integration = 0;
   let e2e = 0;
-  if (existsSync6(join6(projectPath, "tests", "integration")) || existsSync6(join6(projectPath, "test", "integration")) || existsSync6(join6(projectPath, "__tests__", "integration"))) {
+  if (existsSync6(join7(projectPath, "tests", "integration")) || existsSync6(join7(projectPath, "test", "integration")) || existsSync6(join7(projectPath, "__tests__", "integration"))) {
     integration = Math.floor(total * 0.2);
     unit -= integration;
   }
-  if (existsSync6(join6(projectPath, "tests", "e2e")) || existsSync6(join6(projectPath, "test", "e2e")) || existsSync6(join6(projectPath, "e2e")) || existsSync6(join6(projectPath, "cypress"))) {
+  if (existsSync6(join7(projectPath, "tests", "e2e")) || existsSync6(join7(projectPath, "test", "e2e")) || existsSync6(join7(projectPath, "e2e")) || existsSync6(join7(projectPath, "cypress"))) {
     e2e = Math.floor(total * 0.1);
     unit -= e2e;
   }
@@ -53080,11 +53102,11 @@ var MetricCollectorService = class {
    * Detect primary language of a project
    */
   detectLanguage(projectPath) {
-    if (existsSync7(join7(projectPath, "Cargo.toml"))) return "rust";
-    if (existsSync7(join7(projectPath, "go.mod"))) return "go";
-    if (existsSync7(join7(projectPath, "pyproject.toml")) || existsSync7(join7(projectPath, "requirements.txt"))) return "python";
-    if (existsSync7(join7(projectPath, "package.json"))) {
-      if (existsSync7(join7(projectPath, "tsconfig.json"))) return "typescript";
+    if (existsSync7(join8(projectPath, "Cargo.toml"))) return "rust";
+    if (existsSync7(join8(projectPath, "go.mod"))) return "go";
+    if (existsSync7(join8(projectPath, "pyproject.toml")) || existsSync7(join8(projectPath, "requirements.txt"))) return "python";
+    if (existsSync7(join8(projectPath, "package.json"))) {
+      if (existsSync7(join8(projectPath, "tsconfig.json"))) return "typescript";
       return "javascript";
     }
     return "unknown";
@@ -53103,7 +53125,7 @@ var MetricCollectorService = class {
       if (!existsSync7(dirPath)) return;
       const entries = readdirSync3(dirPath, { withFileTypes: true });
       for (const entry of entries) {
-        const fullPath = join7(dirPath, entry.name);
+        const fullPath = join8(dirPath, entry.name);
         if (entry.isDirectory()) {
           const excludeDirs = ["node_modules", "dist", "coverage", "build", ".git", "vendor", "target"];
           if (excludeDirs.includes(entry.name)) continue;
@@ -83807,7 +83829,7 @@ var DOMAIN_FACTORIES = {
   "learning-optimization": (eb, m, c) => createLearningOptimizationPlugin(eb, m, c),
   "coordination": (eb, m, c) => createCoordinationPlugin(eb, m, c)
 };
-function findProjectRoot() {
+function findProjectRoot2() {
   let dir = process.cwd();
   const root = path9.parse(dir).root;
   while (dir !== root) {
@@ -83838,7 +83860,7 @@ var QEKernelImpl = class {
   constructor(config = {}) {
     this._config = { ...DEFAULT_CONFIG53, ...config };
     this._startTime = /* @__PURE__ */ new Date();
-    const projectRoot = findProjectRoot();
+    const projectRoot = findProjectRoot2();
     const dataDir = this._config.dataDir || path9.join(projectRoot, ".agentic-qe");
     if (!fs8.existsSync(dataDir)) {
       fs8.mkdirSync(dataDir, { recursive: true });
@@ -87164,7 +87186,7 @@ var QueenRouterAdapter = class {
 
 // src/hooks/cross-phase-hooks.ts
 import { readFileSync as readFileSync7, existsSync as existsSync9 } from "fs";
-import { join as join10 } from "path";
+import { join as join11 } from "path";
 import { parse as parseYaml } from "yaml";
 
 // src/memory/cross-phase-memory.ts
@@ -87447,7 +87469,7 @@ var CrossPhaseHookExecutor = class {
   configPath;
   listeners = /* @__PURE__ */ new Map();
   constructor(configPath) {
-    this.configPath = configPath || join10(process.cwd(), ".claude/hooks/cross-phase-memory.yaml");
+    this.configPath = configPath || join11(process.cwd(), ".claude/hooks/cross-phase-memory.yaml");
     this.memory = getCrossPhaseMemory();
   }
   // ---------------------------------------------------------------------------
@@ -89634,7 +89656,7 @@ import Database2 from "better-sqlite3";
 import { v4 as uuidv460 } from "uuid";
 var DEFAULT_SQLITE_CONFIG = {
   // LEGACY: Ignored when useUnified=true (the default). All data goes to memory.db
-  dbPath: ".agentic-qe/qe-patterns.db",
+  dbPath: ".agentic-qe/memory.db",
   walMode: true,
   mmapSize: 256 * 1024 * 1024,
   // 256MB
@@ -90737,7 +90759,7 @@ var DEFAULT_REAL_CONFIG = {
   sqlite: {
     // ADR-046: Now uses unified storage via UnifiedMemoryManager by default
     // dbPath is ignored when useUnified=true (the default)
-    dbPath: ".agentic-qe/qe-patterns.db",
+    dbPath: ".agentic-qe/memory.db",
     // Legacy fallback path
     walMode: true,
     useUnified: true
@@ -91236,7 +91258,7 @@ var RealQEReasoningBank = class {
       // Would need to track this in real-embeddings
       transformerAvailable: isTransformerAvailable(),
       embeddingDimension: getEmbeddingDimension(),
-      sqliteDbPath: this.qeConfig.sqlite.dbPath || ".agentic-qe/qe-patterns.db"
+      sqliteDbPath: this.qeConfig.sqlite.dbPath || ".agentic-qe/memory.db"
     };
   }
   // ============================================================================
@@ -97044,7 +97066,7 @@ import * as path12 from "path";
 import * as fs11 from "fs";
 var sharedMemoryBackend = null;
 var memoryInitPromise = null;
-function findProjectRoot2() {
+function findProjectRoot3() {
   let dir = process.cwd();
   const root = path12.parse(dir).root;
   while (dir !== root) {
@@ -97063,7 +97085,7 @@ async function getSharedMemoryBackend() {
     return memoryInitPromise;
   }
   memoryInitPromise = (async () => {
-    const projectRoot = findProjectRoot2();
+    const projectRoot = findProjectRoot3();
     const dataDir = path12.join(projectRoot, ".agentic-qe");
     if (!fs11.existsSync(dataDir)) {
       fs11.mkdirSync(dataDir, { recursive: true });
@@ -101314,7 +101336,7 @@ function generateRecommendations2(results) {
 
 // src/domains/requirements-validation/services/quality-criteria/quality-criteria-service.ts
 import { existsSync as existsSync12, readFileSync as readFileSync9 } from "fs";
-import { join as join16 } from "path";
+import { join as join17 } from "path";
 
 // src/domains/requirements-validation/services/quality-criteria/types.ts
 var HTSM_CATEGORIES = [
@@ -101355,11 +101377,11 @@ var QualityCriteriaService = class {
   findTemplatePath() {
     const possiblePaths = [
       // Relative to v3 package
-      join16(process.cwd(), ".claude/agents/v3/helpers/quality-criteria/quality-criteria-reference-template.html"),
+      join17(process.cwd(), ".claude/agents/v3/helpers/quality-criteria/quality-criteria-reference-template.html"),
       // In node_modules
-      join16(process.cwd(), "node_modules/@agentic-qe/v3/assets/agents/v3/helpers/quality-criteria/quality-criteria-reference-template.html"),
+      join17(process.cwd(), "node_modules/@agentic-qe/v3/assets/agents/v3/helpers/quality-criteria/quality-criteria-reference-template.html"),
       // Development path
-      join16(__dirname, "../../../../../assets/agents/v3/helpers/quality-criteria/quality-criteria-reference-template.html")
+      join17(__dirname, "../../../../../assets/agents/v3/helpers/quality-criteria/quality-criteria-reference-template.html")
     ];
     for (const path16 of possiblePaths) {
       if (existsSync12(path16)) {
@@ -112038,7 +112060,7 @@ async function createCoherenceService(wasmLoader2, config, logger) {
 // src/integrations/coherence/wasm-loader.ts
 import { createRequire as createRequire2 } from "node:module";
 import { fileURLToPath as fileURLToPath2 } from "node:url";
-import { dirname as dirname7, join as join18 } from "node:path";
+import { dirname as dirname7, join as join19 } from "node:path";
 import { readFileSync as readFileSync11, existsSync as existsSync14 } from "node:fs";
 var FALLBACK_RETRY_DELAYS_MS = [1e3, 2e3, 4e3];
 var WasmLoader = class {
@@ -112297,12 +112319,12 @@ var WasmLoader = class {
         (() => {
           try {
             const modulePath = require3.resolve("prime-radiant-advanced-wasm");
-            return join18(dirname7(modulePath), "prime_radiant_advanced_wasm_bg.wasm");
+            return join19(dirname7(modulePath), "prime_radiant_advanced_wasm_bg.wasm");
           } catch {
             return null;
           }
         })(),
-        join18(process.cwd(), "node_modules/prime-radiant-advanced-wasm/prime_radiant_advanced_wasm_bg.wasm")
+        join19(process.cwd(), "node_modules/prime-radiant-advanced-wasm/prime_radiant_advanced_wasm_bg.wasm")
       ].filter((p) => p !== null);
       for (const path16 of wasmPaths) {
         if (existsSync14(path16)) {
@@ -112556,15 +112578,15 @@ var WasmLoader = class {
       (() => {
         try {
           const modulePath = require3.resolve("prime-radiant-advanced-wasm");
-          return join18(dirname7(modulePath), "prime_radiant_advanced_wasm_bg.wasm");
+          return join19(dirname7(modulePath), "prime_radiant_advanced_wasm_bg.wasm");
         } catch {
           return null;
         }
       })(),
       // Direct node_modules path from current file
-      join18(dirname7(fileURLToPath2(import.meta.url)), "../../../../node_modules/prime-radiant-advanced-wasm/prime_radiant_advanced_wasm_bg.wasm"),
+      join19(dirname7(fileURLToPath2(import.meta.url)), "../../../../node_modules/prime-radiant-advanced-wasm/prime_radiant_advanced_wasm_bg.wasm"),
       // Workspace root
-      join18(process.cwd(), "node_modules/prime-radiant-advanced-wasm/prime_radiant_advanced_wasm_bg.wasm")
+      join19(process.cwd(), "node_modules/prime-radiant-advanced-wasm/prime_radiant_advanced_wasm_bg.wasm")
     ].filter((p) => p !== null);
     let wasmPath = null;
     for (const path16 of wasmPaths) {

package/v3/dist/sync/claude-flow-bridge.d.ts

@@ -2,7 +2,7 @@
  * Claude Flow to AQE Memory Bridge
  *
  * Syncs Claude Flow memories (.claude-flow/memory/store.json)
- * to AQE V3 database (v3/.agentic-qe/memory.db)
+ * to AQE consolidated database (.agentic-qe/memory.db)
  *
  * This ensures experiences captured by Claude Code tasks
  * are available to AQE agents for learning.

package/v3/dist/sync/claude-flow-bridge.js

@@ -2,7 +2,7 @@
  * Claude Flow to AQE Memory Bridge
  *
  * Syncs Claude Flow memories (.claude-flow/memory/store.json)
- * to AQE V3 database (v3/.agentic-qe/memory.db)
+ * to AQE consolidated database (.agentic-qe/memory.db)
  *
  * This ensures experiences captured by Claude Code tasks
  * are available to AQE agents for learning.

package/v3/dist/sync/interfaces.d.ts

@@ -240,6 +240,12 @@ export interface EmbeddingGenerator {
 export declare const TYPE_MAPPING: Record<string, string>;
 /**
  * Default sync configuration
+ *
+ * CONSOLIDATION NOTE (2026-01-30):
+ * All data is now consolidated in ROOT database: .agentic-qe/memory.db
+ * - MCP server writes here via findProjectRoot()
+ * - V3 runtime writes here via kernel.ts findProjectRoot()
+ * - v3/.agentic-qe/memory.db is DEPRECATED (data merged to root)
  */
 export declare const DEFAULT_SYNC_CONFIG: SyncConfig;
 //# sourceMappingURL=interfaces.d.ts.map

package/v3/dist/sync/interfaces.d.ts.map

@@ -1 +1 @@
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package/v3/dist/sync/interfaces.js

@@ -16,12 +16,18 @@ export const TYPE_MAPPING = {
 };
 /**
  * Default sync configuration
+ *
+ * CONSOLIDATION NOTE (2026-01-30):
+ * All data is now consolidated in ROOT database: .agentic-qe/memory.db
+ * - MCP server writes here via findProjectRoot()
+ * - V3 runtime writes here via kernel.ts findProjectRoot()
+ * - v3/.agentic-qe/memory.db is DEPRECATED (data merged to root)
  */
 export const DEFAULT_SYNC_CONFIG = {
     local: {
-        // Paths are relative to project root (parent of v3/)
-        v3MemoryDb: '../v3/.agentic-qe/memory.db',
-        rootMemoryDb: '../.agentic-qe/memory.db',
+        // PRIMARY: Root database (consolidated, MCP-active)
+        v3MemoryDb: '../.agentic-qe/memory.db', // Now points to root (consolidated)
+        rootMemoryDb: '../.agentic-qe/memory.db', // Same as above
         claudeFlowMemory: '../.claude-flow/memory/store.json',
         claudeFlowDaemon: '../.claude-flow/daemon-state.json',
         claudeFlowMetrics: '../.claude-flow/metrics/',
@@ -43,28 +49,20 @@ export const DEFAULT_SYNC_CONFIG = {
         batchSize: 1000,
         conflictResolution: 'newer-wins',
         sourcePriority: {
-            v3Memory: 1,
+            rootMemory: 1, // Root is now PRIMARY (consolidated)
             claudeFlowMemory: 2,
-            rootMemory: 3,
-            intelligenceJson: 4,
-            legacy: 5,
+            intelligenceJson: 3,
+            legacy: 4,
         },
         sources: [
-            // V3 Memory - PRIMARY
+            // ============================================================
+            // ROOT Memory - PRIMARY (Consolidated from V3 + Historical)
+            // All tables now in single database: .agentic-qe/memory.db
+            // ============================================================
             {
-                name: 'v3-qe-patterns',
+                name: 'root-sona-patterns',
                 type: 'sqlite',
-                path: '../v3/.agentic-qe/memory.db',
-                targetTable: 'aqe.qe_patterns',
-                priority: 'high',
-                mode: 'incremental',
-                query: 'SELECT * FROM qe_patterns',
-                enabled: true,
-            },
-            {
-                name: 'v3-sona-patterns',
-                type: 'sqlite',
-                path: '../v3/.agentic-qe/memory.db',
+                path: '../.agentic-qe/memory.db',
                 targetTable: 'aqe.sona_patterns',
                 priority: 'high',
                 mode: 'incremental',
@@ -72,32 +70,21 @@ export const DEFAULT_SYNC_CONFIG = {
                 enabled: true,
             },
             {
-                name: 'v3-goap-actions',
+                name: 'root-goap-actions',
                 type: 'sqlite',
-                path: '../v3/.agentic-qe/memory.db',
+                path: '../.agentic-qe/memory.db',
                 targetTable: 'aqe.goap_actions',
                 priority: 'high',
                 mode: 'incremental',
                 query: 'SELECT * FROM goap_actions',
                 enabled: true,
             },
-            // Claude-Flow Memory
-            {
-                name: 'claude-flow-memory',
-                type: 'json',
-                path: '../.claude-flow/memory/store.json',
-                targetTable: 'aqe.claude_flow_memory',
-                priority: 'high',
-                mode: 'full',
-                enabled: true,
-            },
-            // Root Memory - HISTORICAL
             {
                 name: 'root-memory-entries',
                 type: 'sqlite',
                 path: '../.agentic-qe/memory.db',
                 targetTable: 'aqe.memory_entries',
-                priority: 'medium',
+                priority: 'high',
                 mode: 'incremental',
                 query: 'SELECT * FROM memory_entries',
                 enabled: true,
@@ -107,21 +94,11 @@ export const DEFAULT_SYNC_CONFIG = {
                 type: 'sqlite',
                 path: '../.agentic-qe/memory.db',
                 targetTable: 'aqe.learning_experiences',
-                priority: 'medium',
+                priority: 'high',
                 mode: 'append',
                 query: 'SELECT * FROM learning_experiences',
                 enabled: true,
             },
-            {
-                name: 'root-goap-actions',
-                type: 'sqlite',
-                path: '../.agentic-qe/memory.db',
-                targetTable: 'aqe.goap_actions',
-                priority: 'medium',
-                mode: 'incremental',
-                query: 'SELECT * FROM goap_actions',
-                enabled: true,
-            },
             {
                 name: 'root-patterns',
                 type: 'sqlite',
@@ -142,13 +119,23 @@ export const DEFAULT_SYNC_CONFIG = {
                 query: 'SELECT * FROM events',
                 enabled: true,
             },
-            // Intelligence JSON
+            // Claude-Flow Memory (JSON)
+            {
+                name: 'claude-flow-memory',
+                type: 'json',
+                path: '../.claude-flow/memory/store.json',
+                targetTable: 'aqe.claude_flow_memory',
+                priority: 'medium',
+                mode: 'full',
+                enabled: true,
+            },
+            // Intelligence JSON (Q-Learning)
             {
                 name: 'intelligence-qlearning',
                 type: 'json',
                 path: '../v3/.ruvector/intelligence.json',
                 targetTable: 'aqe.qlearning_patterns',
-                priority: 'medium',
+                priority: 'low',
                 mode: 'full',
                 jsonPath: '$.qvalues',
                 enabled: true,

package/v3/dist/sync/interfaces.js.map

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package/v3/dist/sync/readers/sqlite-reader.d.ts

@@ -2,7 +2,7 @@
  * SQLite Data Reader
  *
  * Reads data from local SQLite databases for cloud sync.
- * Handles: memory.db, qe-patterns.db, etc.
+ * Handles: memory.db (consolidated database)
  */
 import type { DataReader, SyncSource } from '../interfaces.js';
 /**

package/v3/dist/sync/readers/sqlite-reader.js

@@ -2,7 +2,7 @@
  * SQLite Data Reader
  *
  * Reads data from local SQLite databases for cloud sync.
- * Handles: memory.db, qe-patterns.db, etc.
+ * Handles: memory.db (consolidated database)
  */
 import Database from 'better-sqlite3';
 import * as fs from 'fs';

package/v3/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@agentic-qe/v3",
-  "version": "3.3.4",
+  "version": "3.3.5",
   "description": "Agentic QE v3 - Domain-Driven Design Architecture with 12 Bounded Contexts, O(log n) coverage analysis, ReasoningBank learning, 51 specialized QE agents",
   "type": "module",
   "main": "./dist/index.js",