agentic-qe 2.5.9 → 2.6.0

package/dist/cli/init/code-intelligence-init.js

@@ -0,0 +1,250 @@
+"use strict";
+/**
+ * Code Intelligence initialization module
+ *
+ * Sets up Code Intelligence System for semantic code search and knowledge graph.
+ * Requires: Ollama (nomic-embed-text) + RuVector PostgreSQL
+ *
+ * @module cli/init/code-intelligence-init
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.checkCodeIntelligencePrerequisites = checkCodeIntelligencePrerequisites;
+exports.initializeCodeIntelligence = initializeCodeIntelligence;
+exports.loadCodeIntelligenceConfig = loadCodeIntelligenceConfig;
+const chalk_1 = __importDefault(require("chalk"));
+const inquirer_1 = __importDefault(require("inquirer"));
+const fs = __importStar(require("fs-extra"));
+const path = __importStar(require("path"));
+/**
+ * Check if Code Intelligence prerequisites are available
+ */
+async function checkCodeIntelligencePrerequisites() {
+    const messages = [];
+    let ollama = false;
+    let ollamaModel = false;
+    let postgres = false;
+    // Check Ollama
+    try {
+        const ollamaUrl = process.env.OLLAMA_URL || 'http://localhost:11434';
+        const controller = new AbortController();
+        const timeoutId = setTimeout(() => controller.abort(), 3000);
+        const response = await fetch(`${ollamaUrl}/api/tags`, {
+            signal: controller.signal,
+        });
+        clearTimeout(timeoutId);
+        if (response.ok) {
+            ollama = true;
+            const data = await response.json();
+            const models = data.models || [];
+            ollamaModel = models.some((m) => m.name.includes('nomic-embed-text'));
+            if (!ollamaModel) {
+                messages.push('nomic-embed-text model not found. Run: ollama pull nomic-embed-text');
+            }
+        }
+    }
+    catch {
+        messages.push('Ollama not available at http://localhost:11434. Start with: ollama serve');
+    }
+    // Check PostgreSQL/RuVector
+    try {
+        const { Pool } = await Promise.resolve().then(() => __importStar(require('pg')));
+        const pool = new Pool({
+            host: process.env.RUVECTOR_HOST || 'localhost',
+            port: parseInt(process.env.RUVECTOR_PORT || '5432'),
+            database: process.env.RUVECTOR_DATABASE || 'ruvector_db',
+            user: process.env.RUVECTOR_USER || 'ruvector',
+            password: process.env.RUVECTOR_PASSWORD || 'ruvector',
+            connectionTimeoutMillis: 3000,
+        });
+        await pool.query('SELECT 1');
+        await pool.end();
+        postgres = true;
+    }
+    catch {
+        messages.push('RuVector PostgreSQL not available. Start with: docker-compose up -d ruvector');
+    }
+    return {
+        ollama,
+        ollamaModel,
+        postgres,
+        allReady: ollama && ollamaModel && postgres,
+        messages,
+    };
+}
+/**
+ * Initialize Code Intelligence System
+ *
+ * Optionally sets up Code Intelligence if prerequisites are available.
+ * Creates configuration file and optionally triggers initial indexing.
+ *
+ * @param config - Fleet configuration
+ * @param interactive - Whether to prompt user for options
+ */
+async function initializeCodeIntelligence(config, interactive = true) {
+    console.log(chalk_1.default.cyan('\n🧠 Code Intelligence System Setup\n'));
+    // Check prerequisites
+    const prereqs = await checkCodeIntelligencePrerequisites();
+    if (!prereqs.allReady) {
+        console.log(chalk_1.default.yellow('  ⚠️  Code Intelligence prerequisites not available:'));
+        prereqs.messages.forEach(msg => {
+            console.log(chalk_1.default.gray(`     • ${msg}`));
+        });
+        console.log(chalk_1.default.gray('\n  Skipping Code Intelligence setup. You can enable it later with:'));
+        console.log(chalk_1.default.cyan('     aqe code-intel setup\n'));
+        // Create disabled config
+        await saveCodeIntelligenceConfig({
+            enabled: false,
+            ollamaUrl: 'http://localhost:11434',
+            embeddingModel: 'nomic-embed-text',
+            database: {
+                host: 'localhost',
+                port: 5432,
+                database: 'ruvector_db',
+                user: 'ruvector',
+                password: 'ruvector',
+            },
+            indexPaths: ['src'],
+            autoIndex: false,
+            watchEnabled: false,
+        });
+        return;
+    }
+    console.log(chalk_1.default.green('  ✓ All prerequisites available'));
+    console.log(chalk_1.default.gray(`     • Ollama: running with nomic-embed-text`));
+    console.log(chalk_1.default.gray(`     • RuVector PostgreSQL: connected`));
+    // Ask user if they want to enable Code Intelligence
+    let enableCodeIntel = true;
+    let autoIndex = false;
+    if (interactive) {
+        const answers = await inquirer_1.default.prompt([
+            {
+                type: 'confirm',
+                name: 'enable',
+                message: 'Enable Code Intelligence for semantic code search?',
+                default: true,
+            },
+            {
+                type: 'confirm',
+                name: 'autoIndex',
+                message: 'Index the codebase now? (can be done later with: aqe code-intel index)',
+                default: false,
+                when: (ans) => ans.enable,
+            },
+        ]);
+        enableCodeIntel = answers.enable;
+        autoIndex = answers.autoIndex ?? false;
+    }
+    // Save configuration
+    const codeIntelConfig = {
+        enabled: enableCodeIntel,
+        ollamaUrl: process.env.OLLAMA_URL || 'http://localhost:11434',
+        embeddingModel: 'nomic-embed-text',
+        database: {
+            host: process.env.RUVECTOR_HOST || 'localhost',
+            port: parseInt(process.env.RUVECTOR_PORT || '5432'),
+            database: process.env.RUVECTOR_DATABASE || 'ruvector_db',
+            user: process.env.RUVECTOR_USER || 'ruvector',
+            password: process.env.RUVECTOR_PASSWORD || 'ruvector',
+        },
+        indexPaths: ['src'],
+        autoIndex: false,
+        watchEnabled: false,
+    };
+    await saveCodeIntelligenceConfig(codeIntelConfig);
+    if (!enableCodeIntel) {
+        console.log(chalk_1.default.gray('  Code Intelligence disabled. Enable later with: aqe code-intel enable'));
+        return;
+    }
+    console.log(chalk_1.default.green('  ✓ Code Intelligence enabled'));
+    // Perform initial indexing if requested
+    if (autoIndex) {
+        console.log(chalk_1.default.cyan('\n  📊 Indexing codebase (this may take a few minutes)...\n'));
+        try {
+            await indexCodebase();
+            console.log(chalk_1.default.green('  ✓ Codebase indexed successfully'));
+        }
+        catch (error) {
+            console.log(chalk_1.default.yellow(`  ⚠️  Indexing failed: ${error.message}`));
+            console.log(chalk_1.default.gray('     Run manually with: aqe code-intel index'));
+        }
+    }
+    else {
+        console.log(chalk_1.default.gray('\n  To index your codebase, run:'));
+        console.log(chalk_1.default.cyan('     aqe code-intel index'));
+    }
+}
+/**
+ * Save Code Intelligence configuration
+ */
+async function saveCodeIntelligenceConfig(config) {
+    const configDir = path.join(process.cwd(), '.agentic-qe', 'config');
+    await fs.ensureDir(configDir);
+    await fs.writeJson(path.join(configDir, 'code-intelligence.json'), config, { spaces: 2 });
+}
+/**
+ * Load Code Intelligence configuration
+ */
+async function loadCodeIntelligenceConfig() {
+    const configPath = path.join(process.cwd(), '.agentic-qe', 'config', 'code-intelligence.json');
+    try {
+        return await fs.readJson(configPath);
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Index the codebase using Code Intelligence System
+ */
+async function indexCodebase() {
+    const { initializeCodeIntelligence } = await Promise.resolve().then(() => __importStar(require('../../code-intelligence/service/CodeIntelligenceService.js')));
+    const service = await initializeCodeIntelligence();
+    const result = await service.indexDirectory('src', (progress) => {
+        const pct = progress.totalFiles > 0
+            ? Math.round((progress.processedFiles / progress.totalFiles) * 100)
+            : 0;
+        process.stdout.write(`\r  Processing: ${progress.processedFiles}/${progress.totalFiles} files (${pct}%) - ${progress.chunksCreated} chunks`);
+    });
+    process.stdout.write('\n');
+    console.log(chalk_1.default.gray(`     • Files indexed: ${result.filesIndexed}`));
+    console.log(chalk_1.default.gray(`     • Chunks created: ${result.chunksCreated}`));
+    console.log(chalk_1.default.gray(`     • Graph nodes: ${result.nodesCreated}`));
+    console.log(chalk_1.default.gray(`     • Graph edges: ${result.edgesCreated}`));
+}
+//# sourceMappingURL=code-intelligence-init.js.map

package/dist/cli/init/code-intelligence-init.js.map

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package/dist/cli/init/index.d.ts

@@ -9,7 +9,7 @@
 import { InitOptions } from '../../types';
 import { createDirectoryStructure } from './directory-structure';
 import { initializeDatabases } from './database-init';
-import { generateClaudeSettings, setupMCPServer } from './claude-config';
+import { generateClaudeSettings, generateMcpJson, setupMCPServer } from './claude-config';
 import { copyDocumentation } from './documentation';
 import { createBashWrapper } from './bash-wrapper';
 /**
@@ -28,5 +28,5 @@ export declare function initCommand(options: InitOptions): Promise<void>;
 /**
  * Export individual phase functions for testing and reuse
  */
-export { createDirectoryStructure, initializeDatabases, generateClaudeSettings, setupMCPServer, copyDocumentation, createBashWrapper };
+export { createDirectoryStructure, initializeDatabases, generateClaudeSettings, generateMcpJson, setupMCPServer, copyDocumentation, createBashWrapper };
 //# sourceMappingURL=index.d.ts.map

package/dist/cli/init/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/cli/init/index.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAIH,OAAO,EAAe,WAAW,EAAE,MAAM,aAAa,CAAC;AAIvD,OAAO,EAAE,wBAAwB,EAAE,MAAM,uBAAuB,CAAC;AACjE,OAAO,EAAE,mBAAmB,EAAE,MAAM,iBAAiB,CAAC;AACtD,OAAO,EAAE,sBAAsB,EAAE,eAAe,EAAE,cAAc,EAAE,MAAM,iBAAiB,CAAC;AAC1F,OAAO,EAAE,iBAAiB,EAAE,MAAM,iBAAiB,CAAC;AACpD,OAAO,EAAE,iBAAiB,EAAE,MAAM,gBAAgB,CAAC;AAyBnD;;;;;;;;;;;GAWG;AACH,wBAAsB,WAAW,CAAC,OAAO,EAAE,WAAW,GAAG,OAAO,CAAC,IAAI,CAAC,CAkMrE;AAmID;;GAEG;AACH,OAAO,EACL,wBAAwB,EACxB,mBAAmB,EACnB,sBAAsB,EACtB,eAAe,EACf,cAAc,EACd,iBAAiB,EACjB,iBAAiB,EAClB,CAAC"}

package/dist/cli/init/index.js

@@ -11,7 +11,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.createBashWrapper = exports.copyDocumentation = exports.setupMCPServer = exports.generateClaudeSettings = exports.initializeDatabases = exports.createDirectoryStructure = void 0;
+exports.createBashWrapper = exports.copyDocumentation = exports.setupMCPServer = exports.generateMcpJson = exports.generateClaudeSettings = exports.initializeDatabases = exports.createDirectoryStructure = void 0;
 exports.initCommand = initCommand;
 const chalk_1 = __importDefault(require("chalk"));
 const ora_1 = __importDefault(require("ora"));
@@ -23,6 +23,7 @@ const database_init_1 = require("./database-init");
 Object.defineProperty(exports, "initializeDatabases", { enumerable: true, get: function () { return database_init_1.initializeDatabases; } });
 const claude_config_1 = require("./claude-config");
 Object.defineProperty(exports, "generateClaudeSettings", { enumerable: true, get: function () { return claude_config_1.generateClaudeSettings; } });
+Object.defineProperty(exports, "generateMcpJson", { enumerable: true, get: function () { return claude_config_1.generateMcpJson; } });
 Object.defineProperty(exports, "setupMCPServer", { enumerable: true, get: function () { return claude_config_1.setupMCPServer; } });
 const documentation_1 = require("./documentation");
 Object.defineProperty(exports, "copyDocumentation", { enumerable: true, get: function () { return documentation_1.copyDocumentation; } });
@@ -35,6 +36,7 @@ const commands_1 = require("./commands");
 const helpers_1 = require("./helpers");
 const learning_init_1 = require("./learning-init");
 const optional_dependencies_1 = require("./optional-dependencies");
+const code_intelligence_init_1 = require("./code-intelligence-init");
 // Import version from package.json
 const packageJson = require('../../../package.json');
 const PACKAGE_VERSION = packageJson.version;
@@ -80,6 +82,7 @@ async function initCommand(options) {
             description: 'Generating Claude Code settings and MCP server',
             execute: async (cfg) => {
                 await (0, claude_config_1.generateClaudeSettings)(cfg);
+                await (0, claude_config_1.generateMcpJson)(cfg); // Creates .claude/mcp.json with server definitions
                 await (0, claude_config_1.setupMCPServer)();
             },
             critical: true // CRITICAL for learning system!
@@ -136,6 +139,12 @@ async function initCommand(options) {
                 enabled: true,
             }),
             critical: false // Non-critical - learning is optional but valuable
+        },
+        {
+            name: 'Code Intelligence',
+            description: 'Setting up Code Intelligence System (semantic search + knowledge graph)',
+            execute: async (cfg, opts) => (0, code_intelligence_init_1.initializeCodeIntelligence)(cfg, !opts.yes && !opts.nonInteractive),
+            critical: false // Non-critical - requires Ollama + PostgreSQL
         }
     ];
     let spinner = null;
@@ -317,5 +326,16 @@ function displaySuccessMessage(config, options, skippedDeps = []) {
     if (options.enableLearning) {
         console.log(chalk_1.default.blue('🧠 Learning system enabled - agents will improve over time!\n'));
     }
+    // Show RuVector optional enhancement
+    console.log(chalk_1.default.gray('┌─────────────────────────────────────────────────────────────────┐'));
+    console.log(chalk_1.default.gray('│') + chalk_1.default.yellow(' 🧬 Optional: RuVector Self-Learning (GNN + LoRA + EWC++)       ') + chalk_1.default.gray('│'));
+    console.log(chalk_1.default.gray('│                                                                 │'));
+    console.log(chalk_1.default.gray('│') + chalk_1.default.white(' Enable advanced self-learning for 330x faster pattern search:  ') + chalk_1.default.gray('│'));
+    console.log(chalk_1.default.gray('│') + chalk_1.default.cyan('   docker run -d --name ruvector -p 5432:5432 \\                 ') + chalk_1.default.gray('│'));
+    console.log(chalk_1.default.gray('│') + chalk_1.default.cyan('     ruvnet/ruvector:latest                                     ') + chalk_1.default.gray('│'));
+    console.log(chalk_1.default.gray('│') + chalk_1.default.cyan('   echo "AQE_RUVECTOR_ENABLED=true" >> .env                     ') + chalk_1.default.gray('│'));
+    console.log(chalk_1.default.gray('│                                                                 │'));
+    console.log(chalk_1.default.gray('│') + chalk_1.default.gray(' Default: memory.db (SQLite) - no Docker required               ') + chalk_1.default.gray('│'));
+    console.log(chalk_1.default.gray('└─────────────────────────────────────────────────────────────────┘\n'));
 }
 //# sourceMappingURL=index.js.map

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package/dist/code-intelligence/chunking/ASTChunker.d.ts

@@ -0,0 +1,64 @@
+/**
+ * AST-aware code chunker with semantic preservation
+ * Splits code into 256-512 token chunks while preserving function/class boundaries
+ */
+import { ChunkingResult, ChunkingConfig, TokenCounter } from './types.js';
+/**
+ * Simple word-based token counter (approximation)
+ * ~4 characters per token for code
+ */
+export declare class SimpleTokenCounter implements TokenCounter {
+    count(text: string): number;
+}
+export declare class ASTChunker {
+    private parser;
+    private tokenCounter;
+    private config;
+    private splitter;
+    constructor(config?: Partial<ChunkingConfig>, tokenCounter?: TokenCounter);
+    /**
+     * Chunk a file using AST-aware semantic boundaries
+     */
+    chunkFile(filePath: string, content: string, language?: string): ChunkingResult;
+    /**
+     * Process lines not covered by parsed entities
+     */
+    private processUncoveredLines;
+    /**
+     * Create a module-level chunk (imports, constants, etc.)
+     */
+    private createModuleChunk;
+    /**
+     * Add overlap between consecutive chunks
+     */
+    private addOverlap;
+    /**
+     * Extract overlap content from chunk
+     */
+    private extractOverlap;
+    /**
+     * Fallback to line-based chunking if AST parsing fails
+     */
+    private fallbackChunking;
+    /**
+     * Create a fragment chunk (fallback)
+     */
+    private createFragmentChunk;
+    /**
+     * Calculate chunking statistics
+     */
+    private calculateStats;
+    /**
+     * Generate unique chunk ID
+     */
+    private generateChunkId;
+    /**
+     * Get configuration
+     */
+    getConfig(): ChunkingConfig;
+    /**
+     * Update configuration
+     */
+    setConfig(config: Partial<ChunkingConfig>): void;
+}
+//# sourceMappingURL=ASTChunker.d.ts.map

package/dist/code-intelligence/chunking/ASTChunker.d.ts.map

@@ -0,0 +1 @@
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