agentic-flow 3.5.0 → 3.5.1

package/dist/mcp/standalone-stdio.js.map

@@ -1 +1 @@
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node\n/* eslint-disable @typescript-eslint/no-explicit-any -- pre-existing catch(error: any) handlers; outside scope of CWE-78 fix */\n// Standalone agentic-flow MCP server - runs directly via stdio without spawning subprocesses\nimport { FastMCP } from 'fastmcp';\nimport { z } from 'zod';\nimport { execFileSync } from 'child_process';\nimport { registerHarnessTools } from './tools/harness-tools.js';\nimport { registerEcosystemTools, ECOSYSTEM_TOOL_NAMES } from './tools/ecosystem-tools.js';\nimport { applyAgentBoosterEdit } from '../integrations/agent-booster.js';\nimport { installMcpPolicy, parseMcpProfile } from './mcp-policy.js';\nimport { assertCategoryPath, resolveInsideCwd } from '../utils/path-safety.js';\n\n// Security: All shell-outs use execFileSync with argv arrays (shell: false) to\n// prevent OS command injection via tool parameters (CWE-78). Do NOT reintroduce\n// execSync with template-string interpolation here — every prior occurrence in\n// this file was an injection sink reachable through MCP tool arguments.\nconst NPX_EXEC_OPTS = { shell: false as const };\n\n// Suppress FastMCP internal warnings for cleaner output\nconst originalConsoleWarn = console.warn;\nconsole.warn = (...args: any[]) => {\n  const message = args.join(' ');\n  // Filter out FastMCP client capability warnings\n  if (message.includes('could not infer client capabilities')) {\n    // Replace with friendly status message\n    console.error('⏳ Waiting for MCP client connection...');\n    return;\n  }\n  originalConsoleWarn.apply(console, args);\n};\n\nconsole.error('🚀 Starting Agentic-Flow MCP Server (stdio)...');\nconsole.error('📦 Local agentic-flow tools available');\n\nconst server = new FastMCP({\n  name: 'agentic-flow',\n  version: '1.0.8'\n});\n\nconst mcpProfile = parseMcpProfile(process.env.AGENTIC_FLOW_MCP_PROFILE);\ninstallMcpPolicy(server as any, {\n  profile: mcpProfile,\n  allowDarwinExecution: process.env.AGENTIC_FLOW_MCP_ENABLE_DARWIN === 'true',\n});\nconsole.error(`🔐 MCP capability profile: ${mcpProfile}`);\n\n// ADR-075: harness evolution/repair + provenance tools (harness_repair,\n// harness_manifest, harness_verify).\nregisterHarnessTools(server as unknown as Parameters<typeof registerHarnessTools>[0]);\n\n// Ecosystem tools backed by optional ruvnet packages (aidefence, mincut-wasm,\n// @ruvnet/sublinear-core); each has a built-in fallback. Pure computations.\nregisterEcosystemTools(server as unknown as Parameters<typeof registerEcosystemTools>[0]);\n\n// Tool: Run agentic-flow agent\nserver.addTool({\n  name: 'agentic_flow_agent',\n  description: 'Execute an agentic-flow agent with a specific task. Supports multiple providers (Anthropic, OpenRouter, ONNX) and comprehensive configuration options.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (coder, researcher, analyst, etc.) - Use agentic_flow_list_agents to see all 66+ available agents'),\n    task: z.string().describe('Task description for the agent to execute'),\n\n    // Provider Configuration\n    model: z.string().optional().describe('Model to use (e.g., \"claude-sonnet-4-5-20250929\" for Anthropic, \"meta-llama/llama-3.1-8b-instruct\" for OpenRouter, or \"Xenova/gpt2\" for ONNX local models)'),\n    provider: z.enum(['anthropic', 'openrouter', 'onnx', 'gemini']).optional().describe('LLM provider: \"anthropic\" (default, highest quality, requires ANTHROPIC_API_KEY), \"gemini\" (free tier, requires GOOGLE_GEMINI_API_KEY), \"openrouter\" (99% cost savings, requires OPENROUTER_API_KEY), \"onnx\" (free local inference, no API key needed)'),\n\n    // API Configuration\n    anthropicApiKey: z.string().optional().describe('Anthropic API key (sk-ant-...) - overrides ANTHROPIC_API_KEY environment variable'),\n    openrouterApiKey: z.string().optional().describe('OpenRouter API key (sk-or-...) - overrides OPENROUTER_API_KEY environment variable'),\n\n    // Agent Behavior\n    stream: z.boolean().optional().default(false).describe('Enable streaming output (real-time response chunks)'),\n    temperature: z.number().min(0).max(1).optional().describe('Sampling temperature (0.0-1.0): lower = more focused/deterministic, higher = more creative/random. Default varies by agent.'),\n    maxTokens: z.number().positive().optional().describe('Maximum tokens in response (default: 4096). Controls output length.'),\n\n    // Directory Configuration\n    agentsDir: z.string().optional().describe('Custom agents directory path (default: .claude/agents) - for using custom agent definitions'),\n\n    // Output Options\n    outputFormat: z.enum(['text', 'json', 'markdown']).optional().describe('Output format: \"text\" (default, human-readable), \"json\" (structured data), \"markdown\" (formatted docs)'),\n    verbose: z.boolean().optional().default(false).describe('Enable verbose logging for debugging'),\n\n    // Execution Control\n    timeout: z.number().positive().optional().describe('Execution timeout in milliseconds (default: 300000 = 5 minutes)'),\n    retryOnError: z.boolean().optional().default(false).describe('Automatically retry on transient errors (rate limits, network issues)')\n  }),\n  execute: async ({\n    agent,\n    task,\n    model,\n    provider,\n    anthropicApiKey,\n    openrouterApiKey,\n    stream,\n    temperature,\n    maxTokens,\n    agentsDir,\n    outputFormat,\n    verbose,\n    timeout,\n    retryOnError\n  }) => {\n    try {\n      // Build argv (NOT a shell string) — every user-supplied value stays a\n      // separate argv element and cannot be reinterpreted by the shell.\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task];\n\n      // Provider & Model\n      if (model) args.push('--model', model);\n      if (provider) args.push('--provider', provider);\n\n      // API Keys (set as env vars)\n      const env = { ...process.env };\n      if (anthropicApiKey) env.ANTHROPIC_API_KEY = anthropicApiKey;\n      if (openrouterApiKey) env.OPENROUTER_API_KEY = openrouterApiKey;\n\n      // Agent Behavior\n      if (stream) args.push('--stream');\n      if (temperature !== undefined) args.push('--temperature', String(temperature));\n      if (maxTokens) args.push('--max-tokens', String(maxTokens));\n\n      // Directories\n      if (agentsDir) args.push('--agents-dir', agentsDir);\n\n      // Output\n      if (outputFormat) args.push('--output', outputFormat);\n      if (verbose) args.push('--verbose');\n\n      // Execution\n      if (retryOnError) args.push('--retry');\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: timeout || 300000,\n        env\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        model: model || 'default',\n        provider: provider || 'anthropic',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to execute agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List available agents\nserver.addTool({\n  name: 'agentic_flow_list_agents',\n  description: 'List all available agentic-flow agents',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', '--list'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agents: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Create custom agent\nserver.addTool({\n  name: 'agentic_flow_create_agent',\n  description: 'Create a new custom agent in .claude/agents directory. Supports conflict detection and will warn if agent already exists in package or local directories.',\n  parameters: z.object({\n    name: z.string().describe('Agent name (will be converted to kebab-case, e.g., my-custom-agent)'),\n    description: z.string().describe('Agent description (what this agent does)'),\n    systemPrompt: z.string().describe('System prompt that defines the agent behavior and personality'),\n    category: z.string().optional().default('custom').describe('Category/folder to organize the agent (default: custom)'),\n    tools: z.array(z.string()).optional().describe('Optional list of tools this agent can use (e.g., [\"web-search\", \"code-execution\"])')\n  }),\n  execute: async ({ name, description, systemPrompt, category, tools }) => {\n    try {\n      // The CLI turns category into a directory under .claude/agents\n      assertCategoryPath(category || 'custom');\n      const args: string[] = [\n        '--yes', 'agentic-flow', 'agent', 'create',\n        '--name', name,\n        '--description', description,\n        '--prompt', systemPrompt\n      ];\n      if (category && category !== 'custom') args.push('--category', category);\n      if (tools && tools.length > 0) args.push('--tools', tools.join(','));\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 60000,\n        input: 'y\\n' // Auto-confirm if conflict exists\n      });\n\n      return JSON.stringify({\n        success: true,\n        name,\n        category: category || 'custom',\n        message: 'Agent created successfully',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to create agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List agents with source information\nserver.addTool({\n  name: 'agentic_flow_list_all_agents',\n  description: 'List all available agents including both package agents and custom local agents. Shows source (package or local) and handles deduplication.',\n  parameters: z.object({\n    format: z.enum(['summary', 'detailed', 'json']).optional().default('summary').describe('Output format: summary (brief list), detailed (full info), json (structured data)'),\n    filterSource: z.enum(['all', 'package', 'local']).optional().default('all').describe('Filter by source: all, package (npm distribution), or local (custom .claude/agents)')\n  }),\n  execute: async ({ format, filterSource }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'list', format || 'summary'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      if (format === 'json') {\n        const agents = JSON.parse(result);\n        const filtered = filterSource && filterSource !== 'all'\n          ? agents.filter((a: any) => a.source === filterSource)\n          : agents;\n\n        return JSON.stringify({\n          success: true,\n          count: filtered.length,\n          filterSource: filterSource || 'all',\n          agents: filtered\n        }, null, 2);\n      }\n\n      return JSON.stringify({\n        success: true,\n        filterSource: filterSource || 'all',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get agent information\nserver.addTool({\n  name: 'agentic_flow_agent_info',\n  description: 'Get detailed information about a specific agent including its source, description, category, and system prompt preview.',\n  parameters: z.object({\n    name: z.string().describe('Agent name to get information about')\n  }),\n  execute: async ({ name }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'info', name], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent: name,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get agent info: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Check for agent conflicts\nserver.addTool({\n  name: 'agentic_flow_check_conflicts',\n  description: 'Check for conflicts between package agents and local custom agents. Identifies agents with the same relative path in both locations.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'conflicts'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to check conflicts: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Optimize model selection\nserver.addTool({\n  name: 'agentic_flow_optimize_model',\n  description: 'Automatically select the optimal model for an agent and task based on priorities (quality, cost, speed, privacy). Returns model recommendation with reasoning.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (e.g., coder, researcher, reviewer)'),\n    task: z.string().describe('Task description'),\n    priority: z.enum(['quality', 'balanced', 'cost', 'speed', 'privacy']).optional().default('balanced').describe('Optimization priority: quality (best results), balanced (cost/quality), cost (cheapest), speed (fastest), privacy (local only)'),\n    max_cost: z.number().positive().optional().describe('Maximum cost per task in dollars (optional budget cap)')\n  }),\n  execute: async ({ agent, task, priority, max_cost }) => {\n    try {\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task, '--optimize'];\n\n      if (priority && priority !== 'balanced') {\n        args.push('--priority', priority);\n      }\n\n      if (max_cost) {\n        args.push('--max-cost', String(max_cost));\n      }\n\n      // Add dry-run to just get recommendation without execution\n      args.push('--help'); // This will show the optimization without running\n\n      execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        priority: priority || 'balanced',\n        max_cost,\n        recommendation: 'Model optimization available - use --optimize flag with agent execution',\n        note: 'To apply optimization, use agentic_flow_agent tool with optimize_model parameter set to true'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to optimize model: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// Agent Booster Tools (352x faster code editing)\n// ========================================\n\n// Tool: Apply code edit with Agent Booster\nserver.addTool({\n  name: 'agent_booster_edit_file',\n  description: 'Ultra-fast code editing (352x faster than cloud APIs, $0 cost). Apply precise code edits using Agent Booster\\'s local WASM engine. Use \"// ... existing code ...\" markers for unchanged sections.',\n  parameters: z.object({\n    target_filepath: z.string().describe('Path of the file to modify'),\n    instructions: z.string().describe('First-person instruction (e.g., \"I will add error handling\")'),\n    code_edit: z.string().describe('Precise code lines to edit, using \"// ... existing code ...\" for unchanged sections'),\n    language: z.string().optional().describe('Programming language (auto-detected from file extension if not provided)')\n  }),\n  execute: async ({ target_filepath, instructions, code_edit, language }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Only files inside the working directory may be read or written\n      const safePath = resolveInsideCwd(target_filepath);\n\n      // Read current file\n      if (!fs.existsSync(safePath)) {\n        throw new Error(`File not found: ${target_filepath}`);\n      }\n\n      const originalCode = fs.readFileSync(safePath, 'utf-8');\n\n      // Detect language if not provided\n      if (!language) {\n        const ext = path.extname(target_filepath).slice(1);\n        const langMap: { [key: string]: string } = {\n          'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n          'rs': 'rust', 'go': 'go', 'java': 'java',\n          'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n        };\n        language = langMap[ext] || 'javascript';\n      }\n\n      // Apply edit in-process via the optional agent-booster package; falls back\n      // to the pinned agent-booster@0.2.2 CLI through npx when it is not installed.\n      const parsed = await applyAgentBoosterEdit(originalCode, code_edit, language, { npxTimeoutMs: 30000 });\n\n      if (parsed.success && parsed.confidence >= 0.7) {\n        // High confidence - use Agent Booster result\n        fs.writeFileSync(safePath, parsed.output);\n\n        return JSON.stringify({\n          success: true,\n          method: 'agent_booster',\n          filepath: target_filepath,\n          instruction: instructions,\n          latency_ms: parsed.latency,\n          confidence: (parsed.confidence * 100).toFixed(1) + '%',\n          strategy: parsed.strategy,\n          message: `✅ Successfully edited ${target_filepath} (${parsed.latency}ms, ${(parsed.confidence * 100).toFixed(1)}% confidence)`\n        }, null, 2);\n      } else {\n        // Low confidence - fall back to LLM for complex edits\n        const confidencePercent = (parsed.confidence * 100).toFixed(1);\n\n        return JSON.stringify({\n          success: false,\n          method: 'agent_booster_failed',\n          filepath: target_filepath,\n          confidence: confidencePercent + '%',\n          fallback_required: true,\n          message: `⚠️ Agent Booster confidence too low (${confidencePercent}%). Falling back to LLM for complex edit.`,\n          suggestion: `Use agentic_flow_agent with task: \"Apply this edit to ${target_filepath}: ${instructions}. Original code: ${originalCode.substring(0, 500)}... Target edit: ${code_edit.substring(0, 500)}...\"`,\n          llm_fallback: {\n            tool: 'agentic_flow_agent',\n            agent: 'coder',\n            task: `Apply code edit to ${target_filepath}:\\n\\nInstructions: ${instructions}\\n\\nOriginal code:\\n${originalCode}\\n\\nTarget edit:\\n${code_edit}`,\n            reason: `Agent Booster pattern matching failed (${confidencePercent}% confidence). This edit requires LLM reasoning for: structural changes, complex logic, or vague instructions.`\n          }\n        }, null, 2);\n      }\n    } catch (error: any) {\n      throw new Error(`Failed to edit file: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Batch apply multiple edits\nserver.addTool({\n  name: 'agent_booster_batch_edit',\n  description: 'Apply multiple code edits in a single operation (ultra-fast batch processing). Perfect for multi-file refactoring.',\n  parameters: z.object({\n    edits: z.array(z.object({\n      target_filepath: z.string().describe('File path'),\n      instructions: z.string().describe('First-person instruction'),\n      code_edit: z.string().describe('Code edit with markers'),\n      language: z.string().optional().describe('Programming language')\n    })).describe('Array of edit requests')\n  }),\n  execute: async ({ edits }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        // Detect language\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        // Apply edit\n        const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            success: true,\n            latency_ms: parsed.latency,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%',\n            reason: 'Low confidence'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        total: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        avg_latency_ms: (totalLatency / edits.length).toFixed(1),\n        results,\n        performance_note: `Agent Booster: ${totalLatency}ms total vs Morph LLM: ~${edits.length * 352}ms (${((edits.length * 352) / totalLatency).toFixed(1)}x faster)`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Batch edit failed: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Parse markdown code blocks and apply edits\nserver.addTool({\n  name: 'agent_booster_parse_markdown',\n  description: 'Parse markdown code blocks with filepath= and instruction= metadata, then apply all edits. Compatible with LLM-generated multi-file refactoring outputs.',\n  parameters: z.object({\n    markdown: z.string().describe('Markdown text containing code blocks with filepath= and instruction= metadata')\n  }),\n  execute: async ({ markdown }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Parse markdown code blocks\n      const regex = /```(?:(\\w+))?\\s*filepath=([^\\s]+)\\s+instruction=([^\\n]+)\\n([\\s\\S]*?)```/g;\n      const edits = [];\n      let match;\n\n      while ((match = regex.exec(markdown)) !== null) {\n        const [, language, filepath, instruction, code_edit] = match;\n        edits.push({\n          target_filepath: filepath.trim(),\n          instructions: instruction.trim(),\n          code_edit: code_edit.trim(),\n          language: language || undefined\n        });\n      }\n\n      if (edits.length === 0) {\n        throw new Error('No code blocks found in markdown. Expected format: ```language filepath=path instruction=description\\\\ncode\\\\n```');\n      }\n\n      // Apply all edits using batch tool\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            instruction: edit.instructions,\n            success: true,\n            latency_ms: parsed.latency\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        parsed_edits: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        results\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to parse and apply markdown edits: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// AgentDB Vector Database Tools (Core 5)\n// ========================================\n\n// Tool: Get database statistics\nserver.addTool({\n  name: 'agentdb_stats',\n  description: 'Enhanced database statistics including table counts, memory usage, and performance metrics for all AgentDB tables.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'db', 'stats'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        stats: result.trim(),\n        timestamp: new Date().toISOString()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get database stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Store reasoning pattern\nserver.addTool({\n  name: 'agentdb_pattern_store',\n  description: 'Store a reasoning pattern in ReasoningBank for future retrieval and learning. Patterns capture successful problem-solving approaches.',\n  parameters: z.object({\n    sessionId: z.string().describe('Session identifier for the pattern'),\n    task: z.string().describe('Task description that was solved'),\n    reward: z.number().min(0).max(1).describe('Success metric (0-1, where 1 is perfect success)'),\n    success: z.boolean().describe('Whether the task was completed successfully'),\n    critique: z.string().optional().describe('Self-reflection or critique of the approach'),\n    input: z.string().optional().describe('Input or context for the task'),\n    output: z.string().optional().describe('Output or solution generated'),\n    latencyMs: z.number().optional().describe('Time taken in milliseconds'),\n    tokensUsed: z.number().optional().describe('Number of tokens consumed')\n  }),\n  execute: async ({ sessionId, task, reward, success, critique, input, output, latencyMs, tokensUsed }) => {\n    try {\n      const cliArgs: string[] = [\n        'agentdb', 'reflexion', 'store',\n        sessionId,\n        task,\n        reward.toString(),\n        success.toString()\n      ];\n\n      if (critique) cliArgs.push(critique);\n      if (input) cliArgs.push(input);\n      if (output) cliArgs.push(output);\n      if (latencyMs !== undefined) cliArgs.push(latencyMs.toString());\n      if (tokensUsed !== undefined) cliArgs.push(tokensUsed.toString());\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        sessionId,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        reward,\n        stored: true,\n        message: 'Pattern stored successfully in ReasoningBank',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to store pattern: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Search reasoning patterns\nserver.addTool({\n  name: 'agentdb_pattern_search',\n  description: 'Search for similar reasoning patterns in ReasoningBank by task description. Retrieves past successful approaches to guide current problem-solving.',\n  parameters: z.object({\n    task: z.string().describe('Task description to search for similar patterns'),\n    k: z.number().optional().default(5).describe('Number of results to retrieve (default: 5)'),\n    minReward: z.number().optional().describe('Minimum reward threshold (0-1) to filter results'),\n    onlySuccesses: z.boolean().optional().describe('Only retrieve successful episodes'),\n    onlyFailures: z.boolean().optional().describe('Only retrieve failed episodes (for learning)')\n  }),\n  execute: async ({ task, k, minReward, onlySuccesses, onlyFailures }) => {\n    try {\n      const cliArgs: string[] = ['agentdb', 'reflexion', 'retrieve', task, (k || 5).toString()];\n\n      if (minReward !== undefined) cliArgs.push(minReward.toString());\n      if (onlyFailures) cliArgs.push('true', 'false');\n      else if (onlySuccesses) cliArgs.push('false', 'true');\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        query: task,\n        k: k || 5,\n        filters: {\n          minReward,\n          onlySuccesses: onlySuccesses || false,\n          onlyFailures: onlyFailures || false\n        },\n        results: result.trim(),\n        message: `Retrieved ${k || 5} similar patterns from ReasoningBank`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to search patterns: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get pattern statistics\nserver.addTool({\n  name: 'agentdb_pattern_stats',\n  description: 'Get aggregated statistics and critique summary for patterns related to a specific task. Provides insights from past attempts.',\n  parameters: z.object({\n    task: z.string().describe('Task description to analyze'),\n    k: z.number().optional().default(5).describe('Number of recent patterns to analyze (default: 5)')\n  }),\n  execute: async ({ task, k }) => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'reflexion', 'critique-summary', task, String(k || 5)], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        task,\n        analyzedPatterns: k || 5,\n        summary: result.trim(),\n        message: 'Pattern statistics and critique summary generated'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get pattern stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Clear query cache\nserver.addTool({\n  name: 'agentdb_clear_cache',\n  description: 'Clear the AgentDB query cache to free memory or force fresh queries. Useful after bulk updates or when debugging.',\n  parameters: z.object({\n    confirm: z.boolean().optional().default(false).describe('Confirmation to clear cache (set to true to proceed)')\n  }),\n  execute: async ({ confirm }) => {\n    try {\n      if (!confirm) {\n        return JSON.stringify({\n          success: false,\n          message: 'Cache clear operation requires confirmation. Set confirm=true to proceed.',\n          warning: 'Clearing cache will remove all cached query results and may temporarily impact performance.'\n        }, null, 2);\n      }\n\n      // Since there's no direct CLI command for cache clearing, we'll provide information\n      // In a real implementation, this would call a cache management function\n      const info = {\n        success: true,\n        operation: 'cache_clear',\n        message: 'Query cache cleared successfully',\n        note: 'AgentDB uses in-memory cache for query optimization. Cache will rebuild automatically on next queries.',\n        timestamp: new Date().toISOString(),\n        nextSteps: [\n          'First queries after cache clear may be slower',\n          'Cache will warm up with frequently accessed patterns',\n          'Consider running agentdb_stats to verify memory reduction'\n        ]\n      };\n\n      return JSON.stringify(info, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to clear cache: ${error.message}`);\n    }\n  }\n});\n\nconsole.error(`✅ Tools (subject to the ${mcpProfile} profile): 7 agentic-flow + 3 agent-booster + 5 agentdb + harness + ${ECOSYSTEM_TOOL_NAMES.length} ecosystem:`);\nconsole.error('   • agentic_flow_agent (execute agent with 13 parameters)');\nconsole.error('   • agentic_flow_list_agents (list 66+ agents)');\nconsole.error('   • agentic_flow_create_agent (create custom agent)');\nconsole.error('   • agentic_flow_list_all_agents (list with sources)');\nconsole.error('   • agentic_flow_agent_info (get agent details)');\nconsole.error('   • agentic_flow_check_conflicts (conflict detection)');\nconsole.error('   • agentic_flow_optimize_model (auto-select best model)');\nconsole.error('   • agent_booster_edit_file (352x faster code editing) ⚡');\nconsole.error('   • agent_booster_batch_edit (multi-file refactoring) ⚡');\nconsole.error('   • agent_booster_parse_markdown (LLM output parsing) ⚡');\nconsole.error('   • agentdb_stats (database statistics) 🧠 NEW');\nconsole.error('   • agentdb_pattern_store (store reasoning patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_search (search similar patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_stats (pattern analytics) 🧠 NEW');\nconsole.error('   • agentdb_clear_cache (clear query cache) 🧠 NEW');\nconsole.error(`   • ${ECOSYSTEM_TOOL_NAMES.join(', ')}`);\nconsole.error('🔌 Starting stdio transport...');\n\nserver.start({ transportType: 'stdio' }).then(() => {\n  console.error('✅ Agentic-Flow MCP server running on stdio');\n  console.error('💡 Ready for MCP client connections (e.g., Claude Desktop)');\n}).catch((error) => {\n  console.error('❌ Failed to start server:', error);\n  process.exit(1);\n});\n"]}
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node\n/* eslint-disable @typescript-eslint/no-explicit-any -- pre-existing catch(error: any) handlers; outside scope of CWE-78 fix */\n// Standalone agentic-flow MCP server - runs directly via stdio without spawning subprocesses\nimport { FastMCP } from 'fastmcp';\nimport { z } from 'zod';\nimport { execFileSync } from 'child_process';\nimport { registerHarnessTools } from './tools/harness-tools.js';\nimport { registerEcosystemTools, ECOSYSTEM_TOOL_NAMES } from './tools/ecosystem-tools.js';\nimport { applyAgentBoosterEdit } from '../integrations/agent-booster.js';\nimport { installMcpPolicy, parseMcpProfile } from './mcp-policy.js';\nimport { assertCategoryPath, resolveInsideCwd } from '../utils/path-safety.js';\nimport { mcpServerVersion } from '../utils/package-version.js';\n\n// Security: All shell-outs use execFileSync with argv arrays (shell: false) to\n// prevent OS command injection via tool parameters (CWE-78). Do NOT reintroduce\n// execSync with template-string interpolation here — every prior occurrence in\n// this file was an injection sink reachable through MCP tool arguments.\nconst NPX_EXEC_OPTS = { shell: false as const };\n\n// Suppress FastMCP internal warnings for cleaner output\nconst originalConsoleWarn = console.warn;\nconsole.warn = (...args: any[]) => {\n  const message = args.join(' ');\n  // Filter out FastMCP client capability warnings\n  if (message.includes('could not infer client capabilities')) {\n    // Replace with friendly status message\n    console.error('⏳ Waiting for MCP client connection...');\n    return;\n  }\n  originalConsoleWarn.apply(console, args);\n};\n\nconsole.error('🚀 Starting Agentic-Flow MCP Server (stdio)...');\nconsole.error('📦 Local agentic-flow tools available');\n\nconst server = new FastMCP({\n  name: 'agentic-flow',\n  version: mcpServerVersion()\n});\n\nconst mcpProfile = parseMcpProfile(process.env.AGENTIC_FLOW_MCP_PROFILE);\ninstallMcpPolicy(server as any, {\n  profile: mcpProfile,\n  allowDarwinExecution: process.env.AGENTIC_FLOW_MCP_ENABLE_DARWIN === 'true',\n});\nconsole.error(`🔐 MCP capability profile: ${mcpProfile}`);\n\n// ADR-075: harness evolution/repair + provenance tools (harness_repair,\n// harness_manifest, harness_verify).\nregisterHarnessTools(server as unknown as Parameters<typeof registerHarnessTools>[0]);\n\n// Ecosystem tools backed by optional ruvnet packages (aidefence, mincut-wasm,\n// @ruvnet/sublinear-core); each has a built-in fallback. Pure computations.\nregisterEcosystemTools(server as unknown as Parameters<typeof registerEcosystemTools>[0]);\n\n// Tool: Run agentic-flow agent\nserver.addTool({\n  name: 'agentic_flow_agent',\n  description: 'Execute an agentic-flow agent with a specific task. Supports multiple providers (Anthropic, OpenRouter, ONNX) and comprehensive configuration options.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (coder, researcher, analyst, etc.) - Use agentic_flow_list_agents to see all 66+ available agents'),\n    task: z.string().describe('Task description for the agent to execute'),\n\n    // Provider Configuration\n    model: z.string().optional().describe('Model to use (e.g., \"claude-sonnet-4-5-20250929\" for Anthropic, \"meta-llama/llama-3.1-8b-instruct\" for OpenRouter, or \"Xenova/gpt2\" for ONNX local models)'),\n    provider: z.enum(['anthropic', 'openrouter', 'onnx', 'gemini']).optional().describe('LLM provider: \"anthropic\" (default, highest quality, requires ANTHROPIC_API_KEY), \"gemini\" (free tier, requires GOOGLE_GEMINI_API_KEY), \"openrouter\" (99% cost savings, requires OPENROUTER_API_KEY), \"onnx\" (free local inference, no API key needed)'),\n\n    // API Configuration\n    anthropicApiKey: z.string().optional().describe('Anthropic API key (sk-ant-...) - overrides ANTHROPIC_API_KEY environment variable'),\n    openrouterApiKey: z.string().optional().describe('OpenRouter API key (sk-or-...) - overrides OPENROUTER_API_KEY environment variable'),\n\n    // Agent Behavior\n    stream: z.boolean().optional().default(false).describe('Enable streaming output (real-time response chunks)'),\n    temperature: z.number().min(0).max(1).optional().describe('Sampling temperature (0.0-1.0): lower = more focused/deterministic, higher = more creative/random. Default varies by agent.'),\n    maxTokens: z.number().positive().optional().describe('Maximum tokens in response (default: 4096). Controls output length.'),\n\n    // Directory Configuration\n    agentsDir: z.string().optional().describe('Custom agents directory path (default: .claude/agents) - for using custom agent definitions'),\n\n    // Output Options\n    outputFormat: z.enum(['text', 'json', 'markdown']).optional().describe('Output format: \"text\" (default, human-readable), \"json\" (structured data), \"markdown\" (formatted docs)'),\n    verbose: z.boolean().optional().default(false).describe('Enable verbose logging for debugging'),\n\n    // Execution Control\n    timeout: z.number().positive().optional().describe('Execution timeout in milliseconds (default: 300000 = 5 minutes)'),\n    retryOnError: z.boolean().optional().default(false).describe('Automatically retry on transient errors (rate limits, network issues)')\n  }),\n  execute: async ({\n    agent,\n    task,\n    model,\n    provider,\n    anthropicApiKey,\n    openrouterApiKey,\n    stream,\n    temperature,\n    maxTokens,\n    agentsDir,\n    outputFormat,\n    verbose,\n    timeout,\n    retryOnError\n  }) => {\n    try {\n      // Build argv (NOT a shell string) — every user-supplied value stays a\n      // separate argv element and cannot be reinterpreted by the shell.\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task];\n\n      // Provider & Model\n      if (model) args.push('--model', model);\n      if (provider) args.push('--provider', provider);\n\n      // API Keys (set as env vars)\n      const env = { ...process.env };\n      if (anthropicApiKey) env.ANTHROPIC_API_KEY = anthropicApiKey;\n      if (openrouterApiKey) env.OPENROUTER_API_KEY = openrouterApiKey;\n\n      // Agent Behavior\n      if (stream) args.push('--stream');\n      if (temperature !== undefined) args.push('--temperature', String(temperature));\n      if (maxTokens) args.push('--max-tokens', String(maxTokens));\n\n      // Directories\n      if (agentsDir) args.push('--agents-dir', agentsDir);\n\n      // Output\n      if (outputFormat) args.push('--output', outputFormat);\n      if (verbose) args.push('--verbose');\n\n      // Execution\n      if (retryOnError) args.push('--retry');\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: timeout || 300000,\n        env\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        model: model || 'default',\n        provider: provider || 'anthropic',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to execute agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List available agents\nserver.addTool({\n  name: 'agentic_flow_list_agents',\n  description: 'List all available agentic-flow agents',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', '--list'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agents: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Create custom agent\nserver.addTool({\n  name: 'agentic_flow_create_agent',\n  description: 'Create a new custom agent in .claude/agents directory. Supports conflict detection and will warn if agent already exists in package or local directories.',\n  parameters: z.object({\n    name: z.string().describe('Agent name (will be converted to kebab-case, e.g., my-custom-agent)'),\n    description: z.string().describe('Agent description (what this agent does)'),\n    systemPrompt: z.string().describe('System prompt that defines the agent behavior and personality'),\n    category: z.string().optional().default('custom').describe('Category/folder to organize the agent (default: custom)'),\n    tools: z.array(z.string()).optional().describe('Optional list of tools this agent can use (e.g., [\"web-search\", \"code-execution\"])')\n  }),\n  execute: async ({ name, description, systemPrompt, category, tools }) => {\n    try {\n      // The CLI turns category into a directory under .claude/agents\n      assertCategoryPath(category || 'custom');\n      const args: string[] = [\n        '--yes', 'agentic-flow', 'agent', 'create',\n        '--name', name,\n        '--description', description,\n        '--prompt', systemPrompt\n      ];\n      if (category && category !== 'custom') args.push('--category', category);\n      if (tools && tools.length > 0) args.push('--tools', tools.join(','));\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 60000,\n        input: 'y\\n' // Auto-confirm if conflict exists\n      });\n\n      return JSON.stringify({\n        success: true,\n        name,\n        category: category || 'custom',\n        message: 'Agent created successfully',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to create agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List agents with source information\nserver.addTool({\n  name: 'agentic_flow_list_all_agents',\n  description: 'List all available agents including both package agents and custom local agents. Shows source (package or local) and handles deduplication.',\n  parameters: z.object({\n    format: z.enum(['summary', 'detailed', 'json']).optional().default('summary').describe('Output format: summary (brief list), detailed (full info), json (structured data)'),\n    filterSource: z.enum(['all', 'package', 'local']).optional().default('all').describe('Filter by source: all, package (npm distribution), or local (custom .claude/agents)')\n  }),\n  execute: async ({ format, filterSource }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'list', format || 'summary'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      if (format === 'json') {\n        const agents = JSON.parse(result);\n        const filtered = filterSource && filterSource !== 'all'\n          ? agents.filter((a: any) => a.source === filterSource)\n          : agents;\n\n        return JSON.stringify({\n          success: true,\n          count: filtered.length,\n          filterSource: filterSource || 'all',\n          agents: filtered\n        }, null, 2);\n      }\n\n      return JSON.stringify({\n        success: true,\n        filterSource: filterSource || 'all',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get agent information\nserver.addTool({\n  name: 'agentic_flow_agent_info',\n  description: 'Get detailed information about a specific agent including its source, description, category, and system prompt preview.',\n  parameters: z.object({\n    name: z.string().describe('Agent name to get information about')\n  }),\n  execute: async ({ name }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'info', name], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent: name,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get agent info: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Check for agent conflicts\nserver.addTool({\n  name: 'agentic_flow_check_conflicts',\n  description: 'Check for conflicts between package agents and local custom agents. Identifies agents with the same relative path in both locations.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'conflicts'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to check conflicts: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Optimize model selection\nserver.addTool({\n  name: 'agentic_flow_optimize_model',\n  description: 'Automatically select the optimal model for an agent and task based on priorities (quality, cost, speed, privacy). Returns model recommendation with reasoning.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (e.g., coder, researcher, reviewer)'),\n    task: z.string().describe('Task description'),\n    priority: z.enum(['quality', 'balanced', 'cost', 'speed', 'privacy']).optional().default('balanced').describe('Optimization priority: quality (best results), balanced (cost/quality), cost (cheapest), speed (fastest), privacy (local only)'),\n    max_cost: z.number().positive().optional().describe('Maximum cost per task in dollars (optional budget cap)')\n  }),\n  execute: async ({ agent, task, priority, max_cost }) => {\n    try {\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task, '--optimize'];\n\n      if (priority && priority !== 'balanced') {\n        args.push('--priority', priority);\n      }\n\n      if (max_cost) {\n        args.push('--max-cost', String(max_cost));\n      }\n\n      // Add dry-run to just get recommendation without execution\n      args.push('--help'); // This will show the optimization without running\n\n      execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        priority: priority || 'balanced',\n        max_cost,\n        recommendation: 'Model optimization available - use --optimize flag with agent execution',\n        note: 'To apply optimization, use agentic_flow_agent tool with optimize_model parameter set to true'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to optimize model: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// Agent Booster Tools (352x faster code editing)\n// ========================================\n\n// Tool: Apply code edit with Agent Booster\nserver.addTool({\n  name: 'agent_booster_edit_file',\n  description: 'Ultra-fast code editing (352x faster than cloud APIs, $0 cost). Apply precise code edits using Agent Booster\\'s local WASM engine. Use \"// ... existing code ...\" markers for unchanged sections.',\n  parameters: z.object({\n    target_filepath: z.string().describe('Path of the file to modify'),\n    instructions: z.string().describe('First-person instruction (e.g., \"I will add error handling\")'),\n    code_edit: z.string().describe('Precise code lines to edit, using \"// ... existing code ...\" for unchanged sections'),\n    language: z.string().optional().describe('Programming language (auto-detected from file extension if not provided)')\n  }),\n  execute: async ({ target_filepath, instructions, code_edit, language }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Only files inside the working directory may be read or written\n      const safePath = resolveInsideCwd(target_filepath);\n\n      // Read current file\n      if (!fs.existsSync(safePath)) {\n        throw new Error(`File not found: ${target_filepath}`);\n      }\n\n      const originalCode = fs.readFileSync(safePath, 'utf-8');\n\n      // Detect language if not provided\n      if (!language) {\n        const ext = path.extname(target_filepath).slice(1);\n        const langMap: { [key: string]: string } = {\n          'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n          'rs': 'rust', 'go': 'go', 'java': 'java',\n          'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n        };\n        language = langMap[ext] || 'javascript';\n      }\n\n      // Apply edit in-process via the optional agent-booster package; falls back\n      // to the pinned agent-booster@0.2.2 CLI through npx when it is not installed.\n      const parsed = await applyAgentBoosterEdit(originalCode, code_edit, language, { npxTimeoutMs: 30000 });\n\n      if (parsed.success && parsed.confidence >= 0.7) {\n        // High confidence - use Agent Booster result\n        fs.writeFileSync(safePath, parsed.output);\n\n        return JSON.stringify({\n          success: true,\n          method: 'agent_booster',\n          filepath: target_filepath,\n          instruction: instructions,\n          latency_ms: parsed.latency,\n          confidence: (parsed.confidence * 100).toFixed(1) + '%',\n          strategy: parsed.strategy,\n          message: `✅ Successfully edited ${target_filepath} (${parsed.latency}ms, ${(parsed.confidence * 100).toFixed(1)}% confidence)`\n        }, null, 2);\n      } else {\n        // Low confidence - fall back to LLM for complex edits\n        const confidencePercent = (parsed.confidence * 100).toFixed(1);\n\n        return JSON.stringify({\n          success: false,\n          method: 'agent_booster_failed',\n          filepath: target_filepath,\n          confidence: confidencePercent + '%',\n          fallback_required: true,\n          message: `⚠️ Agent Booster confidence too low (${confidencePercent}%). Falling back to LLM for complex edit.`,\n          suggestion: `Use agentic_flow_agent with task: \"Apply this edit to ${target_filepath}: ${instructions}. Original code: ${originalCode.substring(0, 500)}... Target edit: ${code_edit.substring(0, 500)}...\"`,\n          llm_fallback: {\n            tool: 'agentic_flow_agent',\n            agent: 'coder',\n            task: `Apply code edit to ${target_filepath}:\\n\\nInstructions: ${instructions}\\n\\nOriginal code:\\n${originalCode}\\n\\nTarget edit:\\n${code_edit}`,\n            reason: `Agent Booster pattern matching failed (${confidencePercent}% confidence). This edit requires LLM reasoning for: structural changes, complex logic, or vague instructions.`\n          }\n        }, null, 2);\n      }\n    } catch (error: any) {\n      throw new Error(`Failed to edit file: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Batch apply multiple edits\nserver.addTool({\n  name: 'agent_booster_batch_edit',\n  description: 'Apply multiple code edits in a single operation (ultra-fast batch processing). Perfect for multi-file refactoring.',\n  parameters: z.object({\n    edits: z.array(z.object({\n      target_filepath: z.string().describe('File path'),\n      instructions: z.string().describe('First-person instruction'),\n      code_edit: z.string().describe('Code edit with markers'),\n      language: z.string().optional().describe('Programming language')\n    })).describe('Array of edit requests')\n  }),\n  execute: async ({ edits }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        // Detect language\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        // Apply edit\n        const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            success: true,\n            latency_ms: parsed.latency,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%',\n            reason: 'Low confidence'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        total: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        avg_latency_ms: (totalLatency / edits.length).toFixed(1),\n        results,\n        performance_note: `Agent Booster: ${totalLatency}ms total vs Morph LLM: ~${edits.length * 352}ms (${((edits.length * 352) / totalLatency).toFixed(1)}x faster)`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Batch edit failed: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Parse markdown code blocks and apply edits\nserver.addTool({\n  name: 'agent_booster_parse_markdown',\n  description: 'Parse markdown code blocks with filepath= and instruction= metadata, then apply all edits. Compatible with LLM-generated multi-file refactoring outputs.',\n  parameters: z.object({\n    markdown: z.string().describe('Markdown text containing code blocks with filepath= and instruction= metadata')\n  }),\n  execute: async ({ markdown }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Parse markdown code blocks\n      const regex = /```(?:(\\w+))?\\s*filepath=([^\\s]+)\\s+instruction=([^\\n]+)\\n([\\s\\S]*?)```/g;\n      const edits = [];\n      let match;\n\n      while ((match = regex.exec(markdown)) !== null) {\n        const [, language, filepath, instruction, code_edit] = match;\n        edits.push({\n          target_filepath: filepath.trim(),\n          instructions: instruction.trim(),\n          code_edit: code_edit.trim(),\n          language: language || undefined\n        });\n      }\n\n      if (edits.length === 0) {\n        throw new Error('No code blocks found in markdown. Expected format: ```language filepath=path instruction=description\\\\ncode\\\\n```');\n      }\n\n      // Apply all edits using batch tool\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            instruction: edit.instructions,\n            success: true,\n            latency_ms: parsed.latency\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        parsed_edits: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        results\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to parse and apply markdown edits: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// AgentDB Vector Database Tools (Core 5)\n// ========================================\n\n// Tool: Get database statistics\nserver.addTool({\n  name: 'agentdb_stats',\n  description: 'Enhanced database statistics including table counts, memory usage, and performance metrics for all AgentDB tables.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'db', 'stats'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        stats: result.trim(),\n        timestamp: new Date().toISOString()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get database stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Store reasoning pattern\nserver.addTool({\n  name: 'agentdb_pattern_store',\n  description: 'Store a reasoning pattern in ReasoningBank for future retrieval and learning. Patterns capture successful problem-solving approaches.',\n  parameters: z.object({\n    sessionId: z.string().describe('Session identifier for the pattern'),\n    task: z.string().describe('Task description that was solved'),\n    reward: z.number().min(0).max(1).describe('Success metric (0-1, where 1 is perfect success)'),\n    success: z.boolean().describe('Whether the task was completed successfully'),\n    critique: z.string().optional().describe('Self-reflection or critique of the approach'),\n    input: z.string().optional().describe('Input or context for the task'),\n    output: z.string().optional().describe('Output or solution generated'),\n    latencyMs: z.number().optional().describe('Time taken in milliseconds'),\n    tokensUsed: z.number().optional().describe('Number of tokens consumed')\n  }),\n  execute: async ({ sessionId, task, reward, success, critique, input, output, latencyMs, tokensUsed }) => {\n    try {\n      const cliArgs: string[] = [\n        'agentdb', 'reflexion', 'store',\n        sessionId,\n        task,\n        reward.toString(),\n        success.toString()\n      ];\n\n      if (critique) cliArgs.push(critique);\n      if (input) cliArgs.push(input);\n      if (output) cliArgs.push(output);\n      if (latencyMs !== undefined) cliArgs.push(latencyMs.toString());\n      if (tokensUsed !== undefined) cliArgs.push(tokensUsed.toString());\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        sessionId,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        reward,\n        stored: true,\n        message: 'Pattern stored successfully in ReasoningBank',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to store pattern: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Search reasoning patterns\nserver.addTool({\n  name: 'agentdb_pattern_search',\n  description: 'Search for similar reasoning patterns in ReasoningBank by task description. Retrieves past successful approaches to guide current problem-solving.',\n  parameters: z.object({\n    task: z.string().describe('Task description to search for similar patterns'),\n    k: z.number().optional().default(5).describe('Number of results to retrieve (default: 5)'),\n    minReward: z.number().optional().describe('Minimum reward threshold (0-1) to filter results'),\n    onlySuccesses: z.boolean().optional().describe('Only retrieve successful episodes'),\n    onlyFailures: z.boolean().optional().describe('Only retrieve failed episodes (for learning)')\n  }),\n  execute: async ({ task, k, minReward, onlySuccesses, onlyFailures }) => {\n    try {\n      const cliArgs: string[] = ['agentdb', 'reflexion', 'retrieve', task, (k || 5).toString()];\n\n      if (minReward !== undefined) cliArgs.push(minReward.toString());\n      if (onlyFailures) cliArgs.push('true', 'false');\n      else if (onlySuccesses) cliArgs.push('false', 'true');\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        query: task,\n        k: k || 5,\n        filters: {\n          minReward,\n          onlySuccesses: onlySuccesses || false,\n          onlyFailures: onlyFailures || false\n        },\n        results: result.trim(),\n        message: `Retrieved ${k || 5} similar patterns from ReasoningBank`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to search patterns: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get pattern statistics\nserver.addTool({\n  name: 'agentdb_pattern_stats',\n  description: 'Get aggregated statistics and critique summary for patterns related to a specific task. Provides insights from past attempts.',\n  parameters: z.object({\n    task: z.string().describe('Task description to analyze'),\n    k: z.number().optional().default(5).describe('Number of recent patterns to analyze (default: 5)')\n  }),\n  execute: async ({ task, k }) => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'reflexion', 'critique-summary', task, String(k || 5)], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        task,\n        analyzedPatterns: k || 5,\n        summary: result.trim(),\n        message: 'Pattern statistics and critique summary generated'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get pattern stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Clear query cache\nserver.addTool({\n  name: 'agentdb_clear_cache',\n  description: 'Clear the AgentDB query cache to free memory or force fresh queries. Useful after bulk updates or when debugging.',\n  parameters: z.object({\n    confirm: z.boolean().optional().default(false).describe('Confirmation to clear cache (set to true to proceed)')\n  }),\n  execute: async ({ confirm }) => {\n    try {\n      if (!confirm) {\n        return JSON.stringify({\n          success: false,\n          message: 'Cache clear operation requires confirmation. Set confirm=true to proceed.',\n          warning: 'Clearing cache will remove all cached query results and may temporarily impact performance.'\n        }, null, 2);\n      }\n\n      // Since there's no direct CLI command for cache clearing, we'll provide information\n      // In a real implementation, this would call a cache management function\n      const info = {\n        success: true,\n        operation: 'cache_clear',\n        message: 'Query cache cleared successfully',\n        note: 'AgentDB uses in-memory cache for query optimization. Cache will rebuild automatically on next queries.',\n        timestamp: new Date().toISOString(),\n        nextSteps: [\n          'First queries after cache clear may be slower',\n          'Cache will warm up with frequently accessed patterns',\n          'Consider running agentdb_stats to verify memory reduction'\n        ]\n      };\n\n      return JSON.stringify(info, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to clear cache: ${error.message}`);\n    }\n  }\n});\n\nconsole.error(`✅ Tools (subject to the ${mcpProfile} profile): 7 agentic-flow + 3 agent-booster + 5 agentdb + harness + ${ECOSYSTEM_TOOL_NAMES.length} ecosystem:`);\nconsole.error('   • agentic_flow_agent (execute agent with 13 parameters)');\nconsole.error('   • agentic_flow_list_agents (list 66+ agents)');\nconsole.error('   • agentic_flow_create_agent (create custom agent)');\nconsole.error('   • agentic_flow_list_all_agents (list with sources)');\nconsole.error('   • agentic_flow_agent_info (get agent details)');\nconsole.error('   • agentic_flow_check_conflicts (conflict detection)');\nconsole.error('   • agentic_flow_optimize_model (auto-select best model)');\nconsole.error('   • agent_booster_edit_file (352x faster code editing) ⚡');\nconsole.error('   • agent_booster_batch_edit (multi-file refactoring) ⚡');\nconsole.error('   • agent_booster_parse_markdown (LLM output parsing) ⚡');\nconsole.error('   • agentdb_stats (database statistics) 🧠 NEW');\nconsole.error('   • agentdb_pattern_store (store reasoning patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_search (search similar patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_stats (pattern analytics) 🧠 NEW');\nconsole.error('   • agentdb_clear_cache (clear query cache) 🧠 NEW');\nconsole.error(`   • ${ECOSYSTEM_TOOL_NAMES.join(', ')}`);\nconsole.error('🔌 Starting stdio transport...');\n\nserver.start({ transportType: 'stdio' }).then(() => {\n  console.error('✅ Agentic-Flow MCP server running on stdio');\n  console.error('💡 Ready for MCP client connections (e.g., Claude Desktop)');\n}).catch((error) => {\n  console.error('❌ Failed to start server:', error);\n  process.exit(1);\n});\n"]}

package/dist/optimizations/configuration-tuning.d.ts

@@ -122,7 +122,7 @@ export declare class ConfigurationTuning {
             entries: number;
         };
         topology: {
-            mode: "auto" | "mesh" | "hierarchical" | "ring" | "star";
+            mode: "hierarchical" | "mesh" | "ring" | "star" | "auto";
             changes: number;
             improvement: string;
         };

package/dist/utils/package-version.d.ts

@@ -6,4 +6,6 @@
 export declare function readPackageVersion(): string;
 /** `agentic-flow@<installed version>`, for npx commands. */
 export declare function packageSpec(): string;
+/** The installed version typed for MCP server metadata (`serverInfo.version`). */
+export declare function mcpServerVersion(): `${number}.${number}.${number}`;
 //# sourceMappingURL=package-version.d.ts.map

package/dist/utils/package-version.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"package-version.d.ts","sourceRoot":"","sources":["../../src/utils/package-version.ts"],"names":[],"mappings":"AAYA;;;;GAIG;AACH,wBAAgB,kBAAkB,IAAI,MAAM,CAgB3C;AAED,4DAA4D;AAC5D,wBAAgB,WAAW,IAAI,MAAM,CAEpC;AAED,kFAAkF;AAClF,wBAAgB,gBAAgB,IAAI,GAAG,MAAM,IAAI,MAAM,IAAI,MAAM,EAAE,CAElE"}

package/dist/utils/package-version.js

@@ -36,4 +36,8 @@ export function readPackageVersion() {
 export function packageSpec() {
     return `agentic-flow@${readPackageVersion()}`;
 }
+/** The installed version typed for MCP server metadata (`serverInfo.version`). */
+export function mcpServerVersion() {
+    return readPackageVersion();
+}
 //# sourceMappingURL=package-version.js.map

package/dist/utils/package-version.js.map

@@ -1 +1 @@
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+{"version":3,"file":"package-version.js","sourceRoot":"","sources":["../../src/utils/package-version.ts"],"names":[],"mappings":"AAAA,sEAAsE;AACtE,EAAE;AACF,4EAA4E;AAC5E,8EAA8E;AAC9E,uEAAuE;AACvE,OAAO,KAAK,EAAE,MAAM,IAAI,CAAC;AACzB,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAC7B,OAAO,EAAE,aAAa,EAAE,MAAM,KAAK,CAAC;AAEpC,MAAM,UAAU,GAAG,yBAAyB,CAAC;AAC7C,IAAI,MAA0B,CAAC;AAE/B;;;;GAIG;AACH,MAAM,UAAU,kBAAkB;IAChC,IAAI,MAAM;QAAE,OAAO,MAAM,CAAC;IAC1B,IAAI,GAAG,GAAG,IAAI,CAAC,OAAO,CAAC,aAAa,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;IACvD,SAAS,CAAC;QACR,MAAM,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC,GAAG,EAAE,cAAc,CAAC,CAAC;QAC5C,IAAI,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,EAAE,CAAC;YACxB,MAAM,GAAG,GAAG,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,CAAC;YACvD,IAAI,GAAG,CAAC,IAAI,KAAK,cAAc,IAAI,OAAO,GAAG,CAAC,OAAO,KAAK,QAAQ,IAAI,UAAU,CAAC,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,EAAE,CAAC;gBACnG,MAAM,GAAG,GAAG,CAAC,OAAiB,CAAC;gBAC/B,OAAO,MAAM,CAAC;YAChB,CAAC;QACH,CAAC;QACD,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;QACjC,IAAI,MAAM,KAAK,GAAG;YAAE,MAAM,IAAI,KAAK,CAAC,mEAAmE,CAAC,CAAC;QACzG,GAAG,GAAG,MAAM,CAAC;IACf,CAAC;AACH,CAAC;AAED,4DAA4D;AAC5D,MAAM,UAAU,WAAW;IACzB,OAAO,gBAAgB,kBAAkB,EAAE,EAAE,CAAC;AAChD,CAAC;AAED,kFAAkF;AAClF,MAAM,UAAU,gBAAgB;IAC9B,OAAO,kBAAkB,EAAqC,CAAC;AACjE,CAAC","sourcesContent":["// The installed agentic-flow version, for commands we write or print.\n//\n// Generated hooks, statuslines and help text run `npx agentic-flow@<this>`,\n// never a dist-tag: @alpha still resolves to the deprecated March 3.0.0-alpha\n// line, and @latest changes under an installed project without notice.\nimport * as fs from 'fs';\nimport * as path from 'path';\nimport { fileURLToPath } from 'url';\n\nconst VERSION_RE = /^\\d+\\.\\d+\\.\\d+[\\w.+-]*$/;\nlet cached: string | undefined;\n\n/**\n * Version from this package's package.json, found by walking up from this\n * file (src/utils under tsx, dist/utils when built). Throws if it is missing,\n * which only happens in a broken install, rather than falling back to a tag.\n */\nexport function readPackageVersion(): string {\n  if (cached) return cached;\n  let dir = path.dirname(fileURLToPath(import.meta.url));\n  for (;;) {\n    const file = path.join(dir, 'package.json');\n    if (fs.existsSync(file)) {\n      const pkg = JSON.parse(fs.readFileSync(file, 'utf-8'));\n      if (pkg.name === 'agentic-flow' && typeof pkg.version === 'string' && VERSION_RE.test(pkg.version)) {\n        cached = pkg.version as string;\n        return cached;\n      }\n    }\n    const parent = path.dirname(dir);\n    if (parent === dir) throw new Error('agentic-flow: cannot find its own package.json to pin the version');\n    dir = parent;\n  }\n}\n\n/** `agentic-flow@<installed version>`, for npx commands. */\nexport function packageSpec(): string {\n  return `agentic-flow@${readPackageVersion()}`;\n}\n\n/** The installed version typed for MCP server metadata (`serverInfo.version`). */\nexport function mcpServerVersion(): `${number}.${number}.${number}` {\n  return readPackageVersion() as `${number}.${number}.${number}`;\n}\n"]}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "agentic-flow",
-  "version": "3.5.0",
+  "version": "3.5.1",
   "description": "AI agents runtime and meta-harness: routes each query to a cost-optimal model (LLM routing), evolves its own harness and orchestrates coding agents over MCP.",
   "type": "module",
   "main": "dist/index.js",
@@ -71,7 +71,7 @@
     "benchmark:embeddings": "tsx src/benchmarks/embeddings-benchmark.ts",
     "test:orchestration": "vitest run tests/orchestration/ --reporter=verbose",
     "test:security": "vitest run tests/security tests/mcp/mcp-policy.test.ts tests/transport/quic-loader.test.ts",
-    "test:governance": "vitest run tests/harness/provenance.test.ts tests/harness/flywheel-governance.test.ts tests/mcp/mcp-policy.test.ts tests/mcp/package-surface.test.ts tests/mcp/zod4-migration.test.ts tests/embeddings/huggingface-offline.test.ts tests/repair/darwin-repair.test.ts tests/integrations",
+    "test:governance": "vitest run tests/harness/provenance.test.ts tests/harness/flywheel-governance.test.ts tests/mcp/mcp-policy.test.ts tests/mcp/package-surface.test.ts tests/mcp/zod4-migration.test.ts tests/mcp/server-version.test.ts tests/embeddings/huggingface-offline.test.ts tests/repair/darwin-repair.test.ts tests/integrations",
     "test:orchestration:smoke": "tsx tests/orchestration/orchestration-api.smoke.ts && tsx tests/orchestration/loop-policy.smoke.ts && tsx tests/orchestration/memory-plane.smoke.ts",
     "test:integrations": "vitest run tests/integrations"
   },

package/dist/core/agentdb-wrapper.d.ts

@@ -1,149 +0,0 @@
-/**
- * AgentDBWrapper - Clean API over raw AgentDB v2.0.0-alpha.2.11
- *
- * Provides a unified interface for:
- * - Vector search with HNSW indexing
- * - Memory operations (insert, search, update, delete)
- * - TypeScript-first type safety
- * - Error handling and validation
- *
- * Note: AgentDB is optional - falls back gracefully on Windows
- *
- * @module agentdb-wrapper
- */
-import type { AgentDBConfig, VectorEntry, VectorSearchOptions, VectorSearchResult, MemoryInsertOptions, MemoryUpdateOptions, MemoryDeleteOptions, MemoryGetOptions, AgentDBStats, BatchInsertResult } from '../types/agentdb.js';
-/**
- * Main wrapper class for AgentDB operations
- *
- * @example
- * ```typescript
- * const wrapper = new AgentDBWrapper({
- *   dbPath: ':memory:',
- *   dimension: 384,
- *   hnswConfig: { M: 16, efConstruction: 200 }
- * });
- *
- * await wrapper.initialize();
- *
- * // Insert a vector
- * const vector = new Float32Array(384);
- * await wrapper.insert({ vector, metadata: { type: 'test' } });
- *
- * // Search
- * const results = await wrapper.vectorSearch(queryVector, { k: 10 });
- *
- * await wrapper.close();
- * ```
- */
-export declare class AgentDBWrapper {
-    private agentDB;
-    private config;
-    private initialized;
-    private dimension;
-    private namespace;
-    private reflexionController;
-    private embedder;
-    private vectorBackend;
-    _agentDB?: any;
-    _embedder?: any;
-    _vectorBackend?: any;
-    /**
-     * Create a new AgentDBWrapper instance
-     *
-     * @param config - Configuration options
-     */
-    constructor(config?: AgentDBConfig);
-    /**
-     * Initialize the AgentDB instance and dependencies
-     *
-     * @throws {DatabaseError} If initialization fails
-     */
-    initialize(): Promise<void>;
-    /**
-     * Ensure wrapper is initialized before operations
-     *
-     * @throws {Error} If not initialized
-     */
-    private ensureInitialized;
-    /**
-     * Validate vector dimension
-     *
-     * @param vector - Vector to validate
-     * @throws {ValidationError} If dimension is invalid
-     */
-    private validateVectorDimension;
-    /**
-     * Generate a unique ID
-     *
-     * @returns A unique identifier
-     */
-    private generateId;
-    /**
-     * Insert a vector with metadata into the database
-     *
-     * @param options - Insert options
-     * @returns The inserted entry with ID
-     * @throws {ValidationError} If vector dimension is invalid
-     * @throws {DatabaseError} If insertion fails
-     */
-    insert(options: MemoryInsertOptions): Promise<{
-        id: string;
-        timestamp: number;
-    }>;
-    /**
-     * Search for similar vectors using HNSW indexing
-     *
-     * @param query - Query vector
-     * @param options - Search options
-     * @returns Array of search results sorted by similarity (descending)
-     * @throws {ValidationError} If query dimension is invalid
-     */
-    vectorSearch(query: Float32Array, options?: VectorSearchOptions): Promise<VectorSearchResult[]>;
-    /**
-     * Update a vector and/or its metadata
-     *
-     * @param options - Update options
-     * @returns True if update succeeded
-     * @throws {ValidationError} If vector dimension is invalid
-     * @throws {DatabaseError} If vector not found
-     */
-    update(options: MemoryUpdateOptions): Promise<boolean>;
-    /**
-     * Delete a vector by ID
-     *
-     * @param options - Delete options
-     * @returns True if deletion succeeded, false if not found
-     */
-    delete(options: MemoryDeleteOptions): Promise<boolean>;
-    /**
-     * Get a vector by ID
-     *
-     * @param options - Get options
-     * @returns Vector entry or null if not found
-     */
-    get(options: MemoryGetOptions): Promise<VectorEntry | null>;
-    /**
-     * Insert multiple vectors in a batch
-     *
-     * @param entries - Array of entries to insert
-     * @returns Batch insert result with success/failure counts
-     */
-    batchInsert(entries: MemoryInsertOptions[]): Promise<BatchInsertResult>;
-    /**
-     * Get database statistics
-     *
-     * @returns Database statistics including vector count and index info
-     */
-    getStats(): Promise<AgentDBStats>;
-    /**
-     * Close the database connection
-     */
-    close(): Promise<void>;
-    /**
-     * Get the underlying AgentDB instance (for advanced usage)
-     *
-     * @returns The raw AgentDB instance
-     */
-    getRawInstance(): any;
-}
-//# sourceMappingURL=agentdb-wrapper.d.ts.map

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