agentic-flow 3.1.0 → 3.2.0

package/dist/mcp/standalone-stdio.js

@@ -5,6 +5,8 @@ import { FastMCP } from 'fastmcp';
 import { z } from 'zod';
 import { execFileSync } from 'child_process';
 import { registerHarnessTools } from './tools/harness-tools.js';
+import { registerEcosystemTools, ECOSYSTEM_TOOL_NAMES } from './tools/ecosystem-tools.js';
+import { applyAgentBoosterEdit } from '../integrations/agent-booster.js';
 import { installMcpPolicy, parseMcpProfile } from './mcp-policy.js';
 import { assertCategoryPath, resolveInsideCwd } from '../utils/path-safety.js';
 // Security: All shell-outs use execFileSync with argv arrays (shell: false) to
@@ -39,6 +41,9 @@ console.error(`🔐 MCP capability profile: ${mcpProfile}`);
 // ADR-075: harness evolution/repair + provenance tools (harness_repair,
 // harness_manifest, harness_verify).
 registerHarnessTools(server);
+// Ecosystem tools backed by optional ruvnet packages (aidefence, mincut-wasm,
+// sublinear-time-solver); each has a built-in fallback. Pure computations.
+registerEcosystemTools(server);
 // Tool: Run agentic-flow agent
 server.addTool({
     name: 'agentic_flow_agent',
@@ -352,15 +357,9 @@ server.addTool({
                 };
                 language = langMap[ext] || 'javascript';
             }
-            // Apply edit using agent-booster@0.2.2 CLI (automatically installs from npm if not available)
-            const result = execFileSync('npx', ['--yes', 'agent-booster@0.2.2', 'apply', '--language', language], {
-                ...NPX_EXEC_OPTS,
-                encoding: 'utf-8',
-                input: JSON.stringify({ code: originalCode, edit: code_edit }),
-                maxBuffer: 10 * 1024 * 1024,
-                timeout: 30000 // Allow time for npx to download package on first run
-            });
-            const parsed = JSON.parse(result);
+            // Apply edit in-process via the optional agent-booster package; falls back
+            // to the pinned agent-booster@0.2.2 CLI through npx when it is not installed.
+            const parsed = await applyAgentBoosterEdit(originalCode, code_edit, language, { npxTimeoutMs: 30000 });
             if (parsed.success && parsed.confidence >= 0.7) {
                 // High confidence - use Agent Booster result
                 fs.writeFileSync(safePath, parsed.output);
@@ -437,14 +436,7 @@ server.addTool({
                     language = langMap[ext] || 'javascript';
                 }
                 // Apply edit
-                const result = execFileSync('npx', ['--yes', 'agent-booster@0.2.2', 'apply', '--language', language], {
-                    ...NPX_EXEC_OPTS,
-                    encoding: 'utf-8',
-                    input: JSON.stringify({ code: originalCode, edit: edit.code_edit }),
-                    maxBuffer: 10 * 1024 * 1024,
-                    timeout: 5000
-                });
-                const parsed = JSON.parse(result);
+                const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });
                 totalLatency += parsed.latency;
                 if (parsed.success && parsed.confidence >= 0.7) {
                     fs.writeFileSync(safePath, parsed.output);
@@ -528,14 +520,7 @@ server.addTool({
                     };
                     language = langMap[ext] || 'javascript';
                 }
-                const result = execFileSync('npx', ['--yes', 'agent-booster@0.2.2', 'apply', '--language', language], {
-                    ...NPX_EXEC_OPTS,
-                    encoding: 'utf-8',
-                    input: JSON.stringify({ code: originalCode, edit: edit.code_edit }),
-                    maxBuffer: 10 * 1024 * 1024,
-                    timeout: 5000
-                });
-                const parsed = JSON.parse(result);
+                const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });
                 totalLatency += parsed.latency;
                 if (parsed.success && parsed.confidence >= 0.7) {
                     fs.writeFileSync(safePath, parsed.output);
@@ -761,7 +746,7 @@ server.addTool({
         }
     }
 });
-console.error('✅ Registered 15 tools (7 agentic-flow + 3 agent-booster + 5 agentdb):');
+console.error(`✅ Tools (subject to the ${mcpProfile} profile): 7 agentic-flow + 3 agent-booster + 5 agentdb + harness + ${ECOSYSTEM_TOOL_NAMES.length} ecosystem:`);
 console.error('   • agentic_flow_agent (execute agent with 13 parameters)');
 console.error('   • agentic_flow_list_agents (list 66+ agents)');
 console.error('   • agentic_flow_create_agent (create custom agent)');
@@ -777,6 +762,7 @@ console.error('   • agentdb_pattern_store (store reasoning patterns) 🧠 NEW'
 console.error('   • agentdb_pattern_search (search similar patterns) 🧠 NEW');
 console.error('   • agentdb_pattern_stats (pattern analytics) 🧠 NEW');
 console.error('   • agentdb_clear_cache (clear query cache) 🧠 NEW');
+console.error(`   • ${ECOSYSTEM_TOOL_NAMES.join(', ')}`);
 console.error('🔌 Starting stdio transport...');
 server.start({ transportType: 'stdio' }).then(() => {
     console.error('✅ Agentic-Flow MCP server running on stdio');

package/dist/mcp/standalone-stdio.js.map

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node\n/* eslint-disable @typescript-eslint/no-explicit-any -- pre-existing catch(error: any) handlers; outside scope of CWE-78 fix */\n// Standalone agentic-flow MCP server - runs directly via stdio without spawning subprocesses\nimport { FastMCP } from 'fastmcp';\nimport { z } from 'zod';\nimport { execFileSync } from 'child_process';\nimport { registerHarnessTools } from './tools/harness-tools.js';\nimport { installMcpPolicy, parseMcpProfile } from './mcp-policy.js';\nimport { assertCategoryPath, resolveInsideCwd } from '../utils/path-safety.js';\n\n// Security: All shell-outs use execFileSync with argv arrays (shell: false) to\n// prevent OS command injection via tool parameters (CWE-78). Do NOT reintroduce\n// execSync with template-string interpolation here — every prior occurrence in\n// this file was an injection sink reachable through MCP tool arguments.\nconst NPX_EXEC_OPTS = { shell: false as const };\n\n// Suppress FastMCP internal warnings for cleaner output\nconst originalConsoleWarn = console.warn;\nconsole.warn = (...args: any[]) => {\n  const message = args.join(' ');\n  // Filter out FastMCP client capability warnings\n  if (message.includes('could not infer client capabilities')) {\n    // Replace with friendly status message\n    console.error('⏳ Waiting for MCP client connection...');\n    return;\n  }\n  originalConsoleWarn.apply(console, args);\n};\n\nconsole.error('🚀 Starting Agentic-Flow MCP Server (stdio)...');\nconsole.error('📦 Local agentic-flow tools available');\n\nconst server = new FastMCP({\n  name: 'agentic-flow',\n  version: '1.0.8'\n});\n\nconst mcpProfile = parseMcpProfile(process.env.AGENTIC_FLOW_MCP_PROFILE);\ninstallMcpPolicy(server as any, {\n  profile: mcpProfile,\n  allowDarwinExecution: process.env.AGENTIC_FLOW_MCP_ENABLE_DARWIN === 'true',\n});\nconsole.error(`🔐 MCP capability profile: ${mcpProfile}`);\n\n// ADR-075: harness evolution/repair + provenance tools (harness_repair,\n// harness_manifest, harness_verify).\nregisterHarnessTools(server as unknown as Parameters<typeof registerHarnessTools>[0]);\n\n// Tool: Run agentic-flow agent\nserver.addTool({\n  name: 'agentic_flow_agent',\n  description: 'Execute an agentic-flow agent with a specific task. Supports multiple providers (Anthropic, OpenRouter, ONNX) and comprehensive configuration options.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (coder, researcher, analyst, etc.) - Use agentic_flow_list_agents to see all 66+ available agents'),\n    task: z.string().describe('Task description for the agent to execute'),\n\n    // Provider Configuration\n    model: z.string().optional().describe('Model to use (e.g., \"claude-sonnet-4-5-20250929\" for Anthropic, \"meta-llama/llama-3.1-8b-instruct\" for OpenRouter, or \"Xenova/gpt2\" for ONNX local models)'),\n    provider: z.enum(['anthropic', 'openrouter', 'onnx', 'gemini']).optional().describe('LLM provider: \"anthropic\" (default, highest quality, requires ANTHROPIC_API_KEY), \"gemini\" (free tier, requires GOOGLE_GEMINI_API_KEY), \"openrouter\" (99% cost savings, requires OPENROUTER_API_KEY), \"onnx\" (free local inference, no API key needed)'),\n\n    // API Configuration\n    anthropicApiKey: z.string().optional().describe('Anthropic API key (sk-ant-...) - overrides ANTHROPIC_API_KEY environment variable'),\n    openrouterApiKey: z.string().optional().describe('OpenRouter API key (sk-or-...) - overrides OPENROUTER_API_KEY environment variable'),\n\n    // Agent Behavior\n    stream: z.boolean().optional().default(false).describe('Enable streaming output (real-time response chunks)'),\n    temperature: z.number().min(0).max(1).optional().describe('Sampling temperature (0.0-1.0): lower = more focused/deterministic, higher = more creative/random. Default varies by agent.'),\n    maxTokens: z.number().positive().optional().describe('Maximum tokens in response (default: 4096). Controls output length.'),\n\n    // Directory Configuration\n    agentsDir: z.string().optional().describe('Custom agents directory path (default: .claude/agents) - for using custom agent definitions'),\n\n    // Output Options\n    outputFormat: z.enum(['text', 'json', 'markdown']).optional().describe('Output format: \"text\" (default, human-readable), \"json\" (structured data), \"markdown\" (formatted docs)'),\n    verbose: z.boolean().optional().default(false).describe('Enable verbose logging for debugging'),\n\n    // Execution Control\n    timeout: z.number().positive().optional().describe('Execution timeout in milliseconds (default: 300000 = 5 minutes)'),\n    retryOnError: z.boolean().optional().default(false).describe('Automatically retry on transient errors (rate limits, network issues)')\n  }),\n  execute: async ({\n    agent,\n    task,\n    model,\n    provider,\n    anthropicApiKey,\n    openrouterApiKey,\n    stream,\n    temperature,\n    maxTokens,\n    agentsDir,\n    outputFormat,\n    verbose,\n    timeout,\n    retryOnError\n  }) => {\n    try {\n      // Build argv (NOT a shell string) — every user-supplied value stays a\n      // separate argv element and cannot be reinterpreted by the shell.\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task];\n\n      // Provider & Model\n      if (model) args.push('--model', model);\n      if (provider) args.push('--provider', provider);\n\n      // API Keys (set as env vars)\n      const env = { ...process.env };\n      if (anthropicApiKey) env.ANTHROPIC_API_KEY = anthropicApiKey;\n      if (openrouterApiKey) env.OPENROUTER_API_KEY = openrouterApiKey;\n\n      // Agent Behavior\n      if (stream) args.push('--stream');\n      if (temperature !== undefined) args.push('--temperature', String(temperature));\n      if (maxTokens) args.push('--max-tokens', String(maxTokens));\n\n      // Directories\n      if (agentsDir) args.push('--agents-dir', agentsDir);\n\n      // Output\n      if (outputFormat) args.push('--output', outputFormat);\n      if (verbose) args.push('--verbose');\n\n      // Execution\n      if (retryOnError) args.push('--retry');\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: timeout || 300000,\n        env\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        model: model || 'default',\n        provider: provider || 'anthropic',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to execute agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List available agents\nserver.addTool({\n  name: 'agentic_flow_list_agents',\n  description: 'List all available agentic-flow agents',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', '--list'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agents: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Create custom agent\nserver.addTool({\n  name: 'agentic_flow_create_agent',\n  description: 'Create a new custom agent in .claude/agents directory. Supports conflict detection and will warn if agent already exists in package or local directories.',\n  parameters: z.object({\n    name: z.string().describe('Agent name (will be converted to kebab-case, e.g., my-custom-agent)'),\n    description: z.string().describe('Agent description (what this agent does)'),\n    systemPrompt: z.string().describe('System prompt that defines the agent behavior and personality'),\n    category: z.string().optional().default('custom').describe('Category/folder to organize the agent (default: custom)'),\n    tools: z.array(z.string()).optional().describe('Optional list of tools this agent can use (e.g., [\"web-search\", \"code-execution\"])')\n  }),\n  execute: async ({ name, description, systemPrompt, category, tools }) => {\n    try {\n      // The CLI turns category into a directory under .claude/agents\n      assertCategoryPath(category || 'custom');\n      const args: string[] = [\n        '--yes', 'agentic-flow', 'agent', 'create',\n        '--name', name,\n        '--description', description,\n        '--prompt', systemPrompt\n      ];\n      if (category && category !== 'custom') args.push('--category', category);\n      if (tools && tools.length > 0) args.push('--tools', tools.join(','));\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 60000,\n        input: 'y\\n' // Auto-confirm if conflict exists\n      });\n\n      return JSON.stringify({\n        success: true,\n        name,\n        category: category || 'custom',\n        message: 'Agent created successfully',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to create agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List agents with source information\nserver.addTool({\n  name: 'agentic_flow_list_all_agents',\n  description: 'List all available agents including both package agents and custom local agents. Shows source (package or local) and handles deduplication.',\n  parameters: z.object({\n    format: z.enum(['summary', 'detailed', 'json']).optional().default('summary').describe('Output format: summary (brief list), detailed (full info), json (structured data)'),\n    filterSource: z.enum(['all', 'package', 'local']).optional().default('all').describe('Filter by source: all, package (npm distribution), or local (custom .claude/agents)')\n  }),\n  execute: async ({ format, filterSource }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'list', format || 'summary'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      if (format === 'json') {\n        const agents = JSON.parse(result);\n        const filtered = filterSource && filterSource !== 'all'\n          ? agents.filter((a: any) => a.source === filterSource)\n          : agents;\n\n        return JSON.stringify({\n          success: true,\n          count: filtered.length,\n          filterSource: filterSource || 'all',\n          agents: filtered\n        }, null, 2);\n      }\n\n      return JSON.stringify({\n        success: true,\n        filterSource: filterSource || 'all',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get agent information\nserver.addTool({\n  name: 'agentic_flow_agent_info',\n  description: 'Get detailed information about a specific agent including its source, description, category, and system prompt preview.',\n  parameters: z.object({\n    name: z.string().describe('Agent name to get information about')\n  }),\n  execute: async ({ name }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'info', name], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent: name,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get agent info: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Check for agent conflicts\nserver.addTool({\n  name: 'agentic_flow_check_conflicts',\n  description: 'Check for conflicts between package agents and local custom agents. Identifies agents with the same relative path in both locations.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'conflicts'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to check conflicts: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Optimize model selection\nserver.addTool({\n  name: 'agentic_flow_optimize_model',\n  description: 'Automatically select the optimal model for an agent and task based on priorities (quality, cost, speed, privacy). Returns model recommendation with reasoning.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (e.g., coder, researcher, reviewer)'),\n    task: z.string().describe('Task description'),\n    priority: z.enum(['quality', 'balanced', 'cost', 'speed', 'privacy']).optional().default('balanced').describe('Optimization priority: quality (best results), balanced (cost/quality), cost (cheapest), speed (fastest), privacy (local only)'),\n    max_cost: z.number().positive().optional().describe('Maximum cost per task in dollars (optional budget cap)')\n  }),\n  execute: async ({ agent, task, priority, max_cost }) => {\n    try {\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task, '--optimize'];\n\n      if (priority && priority !== 'balanced') {\n        args.push('--priority', priority);\n      }\n\n      if (max_cost) {\n        args.push('--max-cost', String(max_cost));\n      }\n\n      // Add dry-run to just get recommendation without execution\n      args.push('--help'); // This will show the optimization without running\n\n      execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        priority: priority || 'balanced',\n        max_cost,\n        recommendation: 'Model optimization available - use --optimize flag with agent execution',\n        note: 'To apply optimization, use agentic_flow_agent tool with optimize_model parameter set to true'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to optimize model: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// Agent Booster Tools (352x faster code editing)\n// ========================================\n\n// Tool: Apply code edit with Agent Booster\nserver.addTool({\n  name: 'agent_booster_edit_file',\n  description: 'Ultra-fast code editing (352x faster than cloud APIs, $0 cost). Apply precise code edits using Agent Booster\\'s local WASM engine. Use \"// ... existing code ...\" markers for unchanged sections.',\n  parameters: z.object({\n    target_filepath: z.string().describe('Path of the file to modify'),\n    instructions: z.string().describe('First-person instruction (e.g., \"I will add error handling\")'),\n    code_edit: z.string().describe('Precise code lines to edit, using \"// ... existing code ...\" for unchanged sections'),\n    language: z.string().optional().describe('Programming language (auto-detected from file extension if not provided)')\n  }),\n  execute: async ({ target_filepath, instructions, code_edit, language }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Only files inside the working directory may be read or written\n      const safePath = resolveInsideCwd(target_filepath);\n\n      // Read current file\n      if (!fs.existsSync(safePath)) {\n        throw new Error(`File not found: ${target_filepath}`);\n      }\n\n      const originalCode = fs.readFileSync(safePath, 'utf-8');\n\n      // Detect language if not provided\n      if (!language) {\n        const ext = path.extname(target_filepath).slice(1);\n        const langMap: { [key: string]: string } = {\n          'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n          'rs': 'rust', 'go': 'go', 'java': 'java',\n          'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n        };\n        language = langMap[ext] || 'javascript';\n      }\n\n      // Apply edit using agent-booster@0.2.2 CLI (automatically installs from npm if not available)\n      const result = execFileSync('npx', ['--yes', 'agent-booster@0.2.2', 'apply', '--language', language], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        input: JSON.stringify({ code: originalCode, edit: code_edit }),\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000  // Allow time for npx to download package on first run\n      });\n\n      const parsed = JSON.parse(result);\n\n      if (parsed.success && parsed.confidence >= 0.7) {\n        // High confidence - use Agent Booster result\n        fs.writeFileSync(safePath, parsed.output);\n\n        return JSON.stringify({\n          success: true,\n          method: 'agent_booster',\n          filepath: target_filepath,\n          instruction: instructions,\n          latency_ms: parsed.latency,\n          confidence: (parsed.confidence * 100).toFixed(1) + '%',\n          strategy: parsed.strategy,\n          message: `✅ Successfully edited ${target_filepath} (${parsed.latency}ms, ${(parsed.confidence * 100).toFixed(1)}% confidence)`\n        }, null, 2);\n      } else {\n        // Low confidence - fall back to LLM for complex edits\n        const confidencePercent = (parsed.confidence * 100).toFixed(1);\n\n        return JSON.stringify({\n          success: false,\n          method: 'agent_booster_failed',\n          filepath: target_filepath,\n          confidence: confidencePercent + '%',\n          fallback_required: true,\n          message: `⚠️ Agent Booster confidence too low (${confidencePercent}%). Falling back to LLM for complex edit.`,\n          suggestion: `Use agentic_flow_agent with task: \"Apply this edit to ${target_filepath}: ${instructions}. Original code: ${originalCode.substring(0, 500)}... Target edit: ${code_edit.substring(0, 500)}...\"`,\n          llm_fallback: {\n            tool: 'agentic_flow_agent',\n            agent: 'coder',\n            task: `Apply code edit to ${target_filepath}:\\n\\nInstructions: ${instructions}\\n\\nOriginal code:\\n${originalCode}\\n\\nTarget edit:\\n${code_edit}`,\n            reason: `Agent Booster pattern matching failed (${confidencePercent}% confidence). This edit requires LLM reasoning for: structural changes, complex logic, or vague instructions.`\n          }\n        }, null, 2);\n      }\n    } catch (error: any) {\n      throw new Error(`Failed to edit file: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Batch apply multiple edits\nserver.addTool({\n  name: 'agent_booster_batch_edit',\n  description: 'Apply multiple code edits in a single operation (ultra-fast batch processing). Perfect for multi-file refactoring.',\n  parameters: z.object({\n    edits: z.array(z.object({\n      target_filepath: z.string().describe('File path'),\n      instructions: z.string().describe('First-person instruction'),\n      code_edit: z.string().describe('Code edit with markers'),\n      language: z.string().optional().describe('Programming language')\n    })).describe('Array of edit requests')\n  }),\n  execute: async ({ edits }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        // Detect language\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        // Apply edit\n        const result = execFileSync('npx', ['--yes', 'agent-booster@0.2.2', 'apply', '--language', language], {\n          ...NPX_EXEC_OPTS,\n          encoding: 'utf-8',\n          input: JSON.stringify({ code: originalCode, edit: edit.code_edit }),\n          maxBuffer: 10 * 1024 * 1024,\n          timeout: 5000\n        });\n\n        const parsed = JSON.parse(result);\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            success: true,\n            latency_ms: parsed.latency,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%',\n            reason: 'Low confidence'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        total: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        avg_latency_ms: (totalLatency / edits.length).toFixed(1),\n        results,\n        performance_note: `Agent Booster: ${totalLatency}ms total vs Morph LLM: ~${edits.length * 352}ms (${((edits.length * 352) / totalLatency).toFixed(1)}x faster)`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Batch edit failed: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Parse markdown code blocks and apply edits\nserver.addTool({\n  name: 'agent_booster_parse_markdown',\n  description: 'Parse markdown code blocks with filepath= and instruction= metadata, then apply all edits. Compatible with LLM-generated multi-file refactoring outputs.',\n  parameters: z.object({\n    markdown: z.string().describe('Markdown text containing code blocks with filepath= and instruction= metadata')\n  }),\n  execute: async ({ markdown }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Parse markdown code blocks\n      const regex = /```(?:(\\w+))?\\s*filepath=([^\\s]+)\\s+instruction=([^\\n]+)\\n([\\s\\S]*?)```/g;\n      const edits = [];\n      let match;\n\n      while ((match = regex.exec(markdown)) !== null) {\n        const [, language, filepath, instruction, code_edit] = match;\n        edits.push({\n          target_filepath: filepath.trim(),\n          instructions: instruction.trim(),\n          code_edit: code_edit.trim(),\n          language: language || undefined\n        });\n      }\n\n      if (edits.length === 0) {\n        throw new Error('No code blocks found in markdown. Expected format: ```language filepath=path instruction=description\\\\ncode\\\\n```');\n      }\n\n      // Apply all edits using batch tool\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        const result = execFileSync('npx', ['--yes', 'agent-booster@0.2.2', 'apply', '--language', language], {\n          ...NPX_EXEC_OPTS,\n          encoding: 'utf-8',\n          input: JSON.stringify({ code: originalCode, edit: edit.code_edit }),\n          maxBuffer: 10 * 1024 * 1024,\n          timeout: 5000\n        });\n\n        const parsed = JSON.parse(result);\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            instruction: edit.instructions,\n            success: true,\n            latency_ms: parsed.latency\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        parsed_edits: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        results\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to parse and apply markdown edits: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// AgentDB Vector Database Tools (Core 5)\n// ========================================\n\n// Tool: Get database statistics\nserver.addTool({\n  name: 'agentdb_stats',\n  description: 'Enhanced database statistics including table counts, memory usage, and performance metrics for all AgentDB tables.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'db', 'stats'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        stats: result.trim(),\n        timestamp: new Date().toISOString()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get database stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Store reasoning pattern\nserver.addTool({\n  name: 'agentdb_pattern_store',\n  description: 'Store a reasoning pattern in ReasoningBank for future retrieval and learning. Patterns capture successful problem-solving approaches.',\n  parameters: z.object({\n    sessionId: z.string().describe('Session identifier for the pattern'),\n    task: z.string().describe('Task description that was solved'),\n    reward: z.number().min(0).max(1).describe('Success metric (0-1, where 1 is perfect success)'),\n    success: z.boolean().describe('Whether the task was completed successfully'),\n    critique: z.string().optional().describe('Self-reflection or critique of the approach'),\n    input: z.string().optional().describe('Input or context for the task'),\n    output: z.string().optional().describe('Output or solution generated'),\n    latencyMs: z.number().optional().describe('Time taken in milliseconds'),\n    tokensUsed: z.number().optional().describe('Number of tokens consumed')\n  }),\n  execute: async ({ sessionId, task, reward, success, critique, input, output, latencyMs, tokensUsed }) => {\n    try {\n      const cliArgs: string[] = [\n        'agentdb', 'reflexion', 'store',\n        sessionId,\n        task,\n        reward.toString(),\n        success.toString()\n      ];\n\n      if (critique) cliArgs.push(critique);\n      if (input) cliArgs.push(input);\n      if (output) cliArgs.push(output);\n      if (latencyMs !== undefined) cliArgs.push(latencyMs.toString());\n      if (tokensUsed !== undefined) cliArgs.push(tokensUsed.toString());\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        sessionId,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        reward,\n        stored: true,\n        message: 'Pattern stored successfully in ReasoningBank',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to store pattern: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Search reasoning patterns\nserver.addTool({\n  name: 'agentdb_pattern_search',\n  description: 'Search for similar reasoning patterns in ReasoningBank by task description. Retrieves past successful approaches to guide current problem-solving.',\n  parameters: z.object({\n    task: z.string().describe('Task description to search for similar patterns'),\n    k: z.number().optional().default(5).describe('Number of results to retrieve (default: 5)'),\n    minReward: z.number().optional().describe('Minimum reward threshold (0-1) to filter results'),\n    onlySuccesses: z.boolean().optional().describe('Only retrieve successful episodes'),\n    onlyFailures: z.boolean().optional().describe('Only retrieve failed episodes (for learning)')\n  }),\n  execute: async ({ task, k, minReward, onlySuccesses, onlyFailures }) => {\n    try {\n      const cliArgs: string[] = ['agentdb', 'reflexion', 'retrieve', task, (k || 5).toString()];\n\n      if (minReward !== undefined) cliArgs.push(minReward.toString());\n      if (onlyFailures) cliArgs.push('true', 'false');\n      else if (onlySuccesses) cliArgs.push('false', 'true');\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        query: task,\n        k: k || 5,\n        filters: {\n          minReward,\n          onlySuccesses: onlySuccesses || false,\n          onlyFailures: onlyFailures || false\n        },\n        results: result.trim(),\n        message: `Retrieved ${k || 5} similar patterns from ReasoningBank`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to search patterns: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get pattern statistics\nserver.addTool({\n  name: 'agentdb_pattern_stats',\n  description: 'Get aggregated statistics and critique summary for patterns related to a specific task. Provides insights from past attempts.',\n  parameters: z.object({\n    task: z.string().describe('Task description to analyze'),\n    k: z.number().optional().default(5).describe('Number of recent patterns to analyze (default: 5)')\n  }),\n  execute: async ({ task, k }) => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'reflexion', 'critique-summary', task, String(k || 5)], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        task,\n        analyzedPatterns: k || 5,\n        summary: result.trim(),\n        message: 'Pattern statistics and critique summary generated'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get pattern stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Clear query cache\nserver.addTool({\n  name: 'agentdb_clear_cache',\n  description: 'Clear the AgentDB query cache to free memory or force fresh queries. Useful after bulk updates or when debugging.',\n  parameters: z.object({\n    confirm: z.boolean().optional().default(false).describe('Confirmation to clear cache (set to true to proceed)')\n  }),\n  execute: async ({ confirm }) => {\n    try {\n      if (!confirm) {\n        return JSON.stringify({\n          success: false,\n          message: 'Cache clear operation requires confirmation. Set confirm=true to proceed.',\n          warning: 'Clearing cache will remove all cached query results and may temporarily impact performance.'\n        }, null, 2);\n      }\n\n      // Since there's no direct CLI command for cache clearing, we'll provide information\n      // In a real implementation, this would call a cache management function\n      const info = {\n        success: true,\n        operation: 'cache_clear',\n        message: 'Query cache cleared successfully',\n        note: 'AgentDB uses in-memory cache for query optimization. Cache will rebuild automatically on next queries.',\n        timestamp: new Date().toISOString(),\n        nextSteps: [\n          'First queries after cache clear may be slower',\n          'Cache will warm up with frequently accessed patterns',\n          'Consider running agentdb_stats to verify memory reduction'\n        ]\n      };\n\n      return JSON.stringify(info, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to clear cache: ${error.message}`);\n    }\n  }\n});\n\nconsole.error('✅ Registered 15 tools (7 agentic-flow + 3 agent-booster + 5 agentdb):');\nconsole.error('   • agentic_flow_agent (execute agent with 13 parameters)');\nconsole.error('   • agentic_flow_list_agents (list 66+ agents)');\nconsole.error('   • agentic_flow_create_agent (create custom agent)');\nconsole.error('   • agentic_flow_list_all_agents (list with sources)');\nconsole.error('   • agentic_flow_agent_info (get agent details)');\nconsole.error('   • agentic_flow_check_conflicts (conflict detection)');\nconsole.error('   • agentic_flow_optimize_model (auto-select best model)');\nconsole.error('   • agent_booster_edit_file (352x faster code editing) ⚡');\nconsole.error('   • agent_booster_batch_edit (multi-file refactoring) ⚡');\nconsole.error('   • agent_booster_parse_markdown (LLM output parsing) ⚡');\nconsole.error('   • agentdb_stats (database statistics) 🧠 NEW');\nconsole.error('   • agentdb_pattern_store (store reasoning patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_search (search similar patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_stats (pattern analytics) 🧠 NEW');\nconsole.error('   • agentdb_clear_cache (clear query cache) 🧠 NEW');\nconsole.error('🔌 Starting stdio transport...');\n\nserver.start({ transportType: 'stdio' }).then(() => {\n  console.error('✅ Agentic-Flow MCP server running on stdio');\n  console.error('💡 Ready for MCP client connections (e.g., Claude Desktop)');\n}).catch((error) => {\n  console.error('❌ Failed to start server:', error);\n  process.exit(1);\n});\n"]}
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node\n/* eslint-disable @typescript-eslint/no-explicit-any -- pre-existing catch(error: any) handlers; outside scope of CWE-78 fix */\n// Standalone agentic-flow MCP server - runs directly via stdio without spawning subprocesses\nimport { FastMCP } from 'fastmcp';\nimport { z } from 'zod';\nimport { execFileSync } from 'child_process';\nimport { registerHarnessTools } from './tools/harness-tools.js';\nimport { registerEcosystemTools, ECOSYSTEM_TOOL_NAMES } from './tools/ecosystem-tools.js';\nimport { applyAgentBoosterEdit } from '../integrations/agent-booster.js';\nimport { installMcpPolicy, parseMcpProfile } from './mcp-policy.js';\nimport { assertCategoryPath, resolveInsideCwd } from '../utils/path-safety.js';\n\n// Security: All shell-outs use execFileSync with argv arrays (shell: false) to\n// prevent OS command injection via tool parameters (CWE-78). Do NOT reintroduce\n// execSync with template-string interpolation here — every prior occurrence in\n// this file was an injection sink reachable through MCP tool arguments.\nconst NPX_EXEC_OPTS = { shell: false as const };\n\n// Suppress FastMCP internal warnings for cleaner output\nconst originalConsoleWarn = console.warn;\nconsole.warn = (...args: any[]) => {\n  const message = args.join(' ');\n  // Filter out FastMCP client capability warnings\n  if (message.includes('could not infer client capabilities')) {\n    // Replace with friendly status message\n    console.error('⏳ Waiting for MCP client connection...');\n    return;\n  }\n  originalConsoleWarn.apply(console, args);\n};\n\nconsole.error('🚀 Starting Agentic-Flow MCP Server (stdio)...');\nconsole.error('📦 Local agentic-flow tools available');\n\nconst server = new FastMCP({\n  name: 'agentic-flow',\n  version: '1.0.8'\n});\n\nconst mcpProfile = parseMcpProfile(process.env.AGENTIC_FLOW_MCP_PROFILE);\ninstallMcpPolicy(server as any, {\n  profile: mcpProfile,\n  allowDarwinExecution: process.env.AGENTIC_FLOW_MCP_ENABLE_DARWIN === 'true',\n});\nconsole.error(`🔐 MCP capability profile: ${mcpProfile}`);\n\n// ADR-075: harness evolution/repair + provenance tools (harness_repair,\n// harness_manifest, harness_verify).\nregisterHarnessTools(server as unknown as Parameters<typeof registerHarnessTools>[0]);\n\n// Ecosystem tools backed by optional ruvnet packages (aidefence, mincut-wasm,\n// sublinear-time-solver); each has a built-in fallback. Pure computations.\nregisterEcosystemTools(server as unknown as Parameters<typeof registerEcosystemTools>[0]);\n\n// Tool: Run agentic-flow agent\nserver.addTool({\n  name: 'agentic_flow_agent',\n  description: 'Execute an agentic-flow agent with a specific task. Supports multiple providers (Anthropic, OpenRouter, ONNX) and comprehensive configuration options.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (coder, researcher, analyst, etc.) - Use agentic_flow_list_agents to see all 66+ available agents'),\n    task: z.string().describe('Task description for the agent to execute'),\n\n    // Provider Configuration\n    model: z.string().optional().describe('Model to use (e.g., \"claude-sonnet-4-5-20250929\" for Anthropic, \"meta-llama/llama-3.1-8b-instruct\" for OpenRouter, or \"Xenova/gpt2\" for ONNX local models)'),\n    provider: z.enum(['anthropic', 'openrouter', 'onnx', 'gemini']).optional().describe('LLM provider: \"anthropic\" (default, highest quality, requires ANTHROPIC_API_KEY), \"gemini\" (free tier, requires GOOGLE_GEMINI_API_KEY), \"openrouter\" (99% cost savings, requires OPENROUTER_API_KEY), \"onnx\" (free local inference, no API key needed)'),\n\n    // API Configuration\n    anthropicApiKey: z.string().optional().describe('Anthropic API key (sk-ant-...) - overrides ANTHROPIC_API_KEY environment variable'),\n    openrouterApiKey: z.string().optional().describe('OpenRouter API key (sk-or-...) - overrides OPENROUTER_API_KEY environment variable'),\n\n    // Agent Behavior\n    stream: z.boolean().optional().default(false).describe('Enable streaming output (real-time response chunks)'),\n    temperature: z.number().min(0).max(1).optional().describe('Sampling temperature (0.0-1.0): lower = more focused/deterministic, higher = more creative/random. Default varies by agent.'),\n    maxTokens: z.number().positive().optional().describe('Maximum tokens in response (default: 4096). Controls output length.'),\n\n    // Directory Configuration\n    agentsDir: z.string().optional().describe('Custom agents directory path (default: .claude/agents) - for using custom agent definitions'),\n\n    // Output Options\n    outputFormat: z.enum(['text', 'json', 'markdown']).optional().describe('Output format: \"text\" (default, human-readable), \"json\" (structured data), \"markdown\" (formatted docs)'),\n    verbose: z.boolean().optional().default(false).describe('Enable verbose logging for debugging'),\n\n    // Execution Control\n    timeout: z.number().positive().optional().describe('Execution timeout in milliseconds (default: 300000 = 5 minutes)'),\n    retryOnError: z.boolean().optional().default(false).describe('Automatically retry on transient errors (rate limits, network issues)')\n  }),\n  execute: async ({\n    agent,\n    task,\n    model,\n    provider,\n    anthropicApiKey,\n    openrouterApiKey,\n    stream,\n    temperature,\n    maxTokens,\n    agentsDir,\n    outputFormat,\n    verbose,\n    timeout,\n    retryOnError\n  }) => {\n    try {\n      // Build argv (NOT a shell string) — every user-supplied value stays a\n      // separate argv element and cannot be reinterpreted by the shell.\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task];\n\n      // Provider & Model\n      if (model) args.push('--model', model);\n      if (provider) args.push('--provider', provider);\n\n      // API Keys (set as env vars)\n      const env = { ...process.env };\n      if (anthropicApiKey) env.ANTHROPIC_API_KEY = anthropicApiKey;\n      if (openrouterApiKey) env.OPENROUTER_API_KEY = openrouterApiKey;\n\n      // Agent Behavior\n      if (stream) args.push('--stream');\n      if (temperature !== undefined) args.push('--temperature', String(temperature));\n      if (maxTokens) args.push('--max-tokens', String(maxTokens));\n\n      // Directories\n      if (agentsDir) args.push('--agents-dir', agentsDir);\n\n      // Output\n      if (outputFormat) args.push('--output', outputFormat);\n      if (verbose) args.push('--verbose');\n\n      // Execution\n      if (retryOnError) args.push('--retry');\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: timeout || 300000,\n        env\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        model: model || 'default',\n        provider: provider || 'anthropic',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to execute agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List available agents\nserver.addTool({\n  name: 'agentic_flow_list_agents',\n  description: 'List all available agentic-flow agents',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', '--list'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agents: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Create custom agent\nserver.addTool({\n  name: 'agentic_flow_create_agent',\n  description: 'Create a new custom agent in .claude/agents directory. Supports conflict detection and will warn if agent already exists in package or local directories.',\n  parameters: z.object({\n    name: z.string().describe('Agent name (will be converted to kebab-case, e.g., my-custom-agent)'),\n    description: z.string().describe('Agent description (what this agent does)'),\n    systemPrompt: z.string().describe('System prompt that defines the agent behavior and personality'),\n    category: z.string().optional().default('custom').describe('Category/folder to organize the agent (default: custom)'),\n    tools: z.array(z.string()).optional().describe('Optional list of tools this agent can use (e.g., [\"web-search\", \"code-execution\"])')\n  }),\n  execute: async ({ name, description, systemPrompt, category, tools }) => {\n    try {\n      // The CLI turns category into a directory under .claude/agents\n      assertCategoryPath(category || 'custom');\n      const args: string[] = [\n        '--yes', 'agentic-flow', 'agent', 'create',\n        '--name', name,\n        '--description', description,\n        '--prompt', systemPrompt\n      ];\n      if (category && category !== 'custom') args.push('--category', category);\n      if (tools && tools.length > 0) args.push('--tools', tools.join(','));\n\n      const result = execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 60000,\n        input: 'y\\n' // Auto-confirm if conflict exists\n      });\n\n      return JSON.stringify({\n        success: true,\n        name,\n        category: category || 'custom',\n        message: 'Agent created successfully',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to create agent: ${error.message}`);\n    }\n  }\n});\n\n// Tool: List agents with source information\nserver.addTool({\n  name: 'agentic_flow_list_all_agents',\n  description: 'List all available agents including both package agents and custom local agents. Shows source (package or local) and handles deduplication.',\n  parameters: z.object({\n    format: z.enum(['summary', 'detailed', 'json']).optional().default('summary').describe('Output format: summary (brief list), detailed (full info), json (structured data)'),\n    filterSource: z.enum(['all', 'package', 'local']).optional().default('all').describe('Filter by source: all, package (npm distribution), or local (custom .claude/agents)')\n  }),\n  execute: async ({ format, filterSource }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'list', format || 'summary'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      if (format === 'json') {\n        const agents = JSON.parse(result);\n        const filtered = filterSource && filterSource !== 'all'\n          ? agents.filter((a: any) => a.source === filterSource)\n          : agents;\n\n        return JSON.stringify({\n          success: true,\n          count: filtered.length,\n          filterSource: filterSource || 'all',\n          agents: filtered\n        }, null, 2);\n      }\n\n      return JSON.stringify({\n        success: true,\n        filterSource: filterSource || 'all',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to list agents: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get agent information\nserver.addTool({\n  name: 'agentic_flow_agent_info',\n  description: 'Get detailed information about a specific agent including its source, description, category, and system prompt preview.',\n  parameters: z.object({\n    name: z.string().describe('Agent name to get information about')\n  }),\n  execute: async ({ name }) => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'info', name], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent: name,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get agent info: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Check for agent conflicts\nserver.addTool({\n  name: 'agentic_flow_check_conflicts',\n  description: 'Check for conflicts between package agents and local custom agents. Identifies agents with the same relative path in both locations.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['--yes', 'agentic-flow', 'agent', 'conflicts'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to check conflicts: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Optimize model selection\nserver.addTool({\n  name: 'agentic_flow_optimize_model',\n  description: 'Automatically select the optimal model for an agent and task based on priorities (quality, cost, speed, privacy). Returns model recommendation with reasoning.',\n  parameters: z.object({\n    agent: z.string().describe('Agent type (e.g., coder, researcher, reviewer)'),\n    task: z.string().describe('Task description'),\n    priority: z.enum(['quality', 'balanced', 'cost', 'speed', 'privacy']).optional().default('balanced').describe('Optimization priority: quality (best results), balanced (cost/quality), cost (cheapest), speed (fastest), privacy (local only)'),\n    max_cost: z.number().positive().optional().describe('Maximum cost per task in dollars (optional budget cap)')\n  }),\n  execute: async ({ agent, task, priority, max_cost }) => {\n    try {\n      const args: string[] = ['--yes', 'agentic-flow', '--agent', agent, '--task', task, '--optimize'];\n\n      if (priority && priority !== 'balanced') {\n        args.push('--priority', priority);\n      }\n\n      if (max_cost) {\n        args.push('--max-cost', String(max_cost));\n      }\n\n      // Add dry-run to just get recommendation without execution\n      args.push('--help'); // This will show the optimization without running\n\n      execFileSync('npx', args, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        agent,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        priority: priority || 'balanced',\n        max_cost,\n        recommendation: 'Model optimization available - use --optimize flag with agent execution',\n        note: 'To apply optimization, use agentic_flow_agent tool with optimize_model parameter set to true'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to optimize model: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// Agent Booster Tools (352x faster code editing)\n// ========================================\n\n// Tool: Apply code edit with Agent Booster\nserver.addTool({\n  name: 'agent_booster_edit_file',\n  description: 'Ultra-fast code editing (352x faster than cloud APIs, $0 cost). Apply precise code edits using Agent Booster\\'s local WASM engine. Use \"// ... existing code ...\" markers for unchanged sections.',\n  parameters: z.object({\n    target_filepath: z.string().describe('Path of the file to modify'),\n    instructions: z.string().describe('First-person instruction (e.g., \"I will add error handling\")'),\n    code_edit: z.string().describe('Precise code lines to edit, using \"// ... existing code ...\" for unchanged sections'),\n    language: z.string().optional().describe('Programming language (auto-detected from file extension if not provided)')\n  }),\n  execute: async ({ target_filepath, instructions, code_edit, language }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Only files inside the working directory may be read or written\n      const safePath = resolveInsideCwd(target_filepath);\n\n      // Read current file\n      if (!fs.existsSync(safePath)) {\n        throw new Error(`File not found: ${target_filepath}`);\n      }\n\n      const originalCode = fs.readFileSync(safePath, 'utf-8');\n\n      // Detect language if not provided\n      if (!language) {\n        const ext = path.extname(target_filepath).slice(1);\n        const langMap: { [key: string]: string } = {\n          'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n          'rs': 'rust', 'go': 'go', 'java': 'java',\n          'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n        };\n        language = langMap[ext] || 'javascript';\n      }\n\n      // Apply edit in-process via the optional agent-booster package; falls back\n      // to the pinned agent-booster@0.2.2 CLI through npx when it is not installed.\n      const parsed = await applyAgentBoosterEdit(originalCode, code_edit, language, { npxTimeoutMs: 30000 });\n\n      if (parsed.success && parsed.confidence >= 0.7) {\n        // High confidence - use Agent Booster result\n        fs.writeFileSync(safePath, parsed.output);\n\n        return JSON.stringify({\n          success: true,\n          method: 'agent_booster',\n          filepath: target_filepath,\n          instruction: instructions,\n          latency_ms: parsed.latency,\n          confidence: (parsed.confidence * 100).toFixed(1) + '%',\n          strategy: parsed.strategy,\n          message: `✅ Successfully edited ${target_filepath} (${parsed.latency}ms, ${(parsed.confidence * 100).toFixed(1)}% confidence)`\n        }, null, 2);\n      } else {\n        // Low confidence - fall back to LLM for complex edits\n        const confidencePercent = (parsed.confidence * 100).toFixed(1);\n\n        return JSON.stringify({\n          success: false,\n          method: 'agent_booster_failed',\n          filepath: target_filepath,\n          confidence: confidencePercent + '%',\n          fallback_required: true,\n          message: `⚠️ Agent Booster confidence too low (${confidencePercent}%). Falling back to LLM for complex edit.`,\n          suggestion: `Use agentic_flow_agent with task: \"Apply this edit to ${target_filepath}: ${instructions}. Original code: ${originalCode.substring(0, 500)}... Target edit: ${code_edit.substring(0, 500)}...\"`,\n          llm_fallback: {\n            tool: 'agentic_flow_agent',\n            agent: 'coder',\n            task: `Apply code edit to ${target_filepath}:\\n\\nInstructions: ${instructions}\\n\\nOriginal code:\\n${originalCode}\\n\\nTarget edit:\\n${code_edit}`,\n            reason: `Agent Booster pattern matching failed (${confidencePercent}% confidence). This edit requires LLM reasoning for: structural changes, complex logic, or vague instructions.`\n          }\n        }, null, 2);\n      }\n    } catch (error: any) {\n      throw new Error(`Failed to edit file: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Batch apply multiple edits\nserver.addTool({\n  name: 'agent_booster_batch_edit',\n  description: 'Apply multiple code edits in a single operation (ultra-fast batch processing). Perfect for multi-file refactoring.',\n  parameters: z.object({\n    edits: z.array(z.object({\n      target_filepath: z.string().describe('File path'),\n      instructions: z.string().describe('First-person instruction'),\n      code_edit: z.string().describe('Code edit with markers'),\n      language: z.string().optional().describe('Programming language')\n    })).describe('Array of edit requests')\n  }),\n  execute: async ({ edits }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        // Detect language\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        // Apply edit\n        const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            success: true,\n            latency_ms: parsed.latency,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%',\n            reason: 'Low confidence'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        total: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        avg_latency_ms: (totalLatency / edits.length).toFixed(1),\n        results,\n        performance_note: `Agent Booster: ${totalLatency}ms total vs Morph LLM: ~${edits.length * 352}ms (${((edits.length * 352) / totalLatency).toFixed(1)}x faster)`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Batch edit failed: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Parse markdown code blocks and apply edits\nserver.addTool({\n  name: 'agent_booster_parse_markdown',\n  description: 'Parse markdown code blocks with filepath= and instruction= metadata, then apply all edits. Compatible with LLM-generated multi-file refactoring outputs.',\n  parameters: z.object({\n    markdown: z.string().describe('Markdown text containing code blocks with filepath= and instruction= metadata')\n  }),\n  execute: async ({ markdown }) => {\n    try {\n      const fs = await import('fs');\n      const path = await import('path');\n\n      // Parse markdown code blocks\n      const regex = /```(?:(\\w+))?\\s*filepath=([^\\s]+)\\s+instruction=([^\\n]+)\\n([\\s\\S]*?)```/g;\n      const edits = [];\n      let match;\n\n      while ((match = regex.exec(markdown)) !== null) {\n        const [, language, filepath, instruction, code_edit] = match;\n        edits.push({\n          target_filepath: filepath.trim(),\n          instructions: instruction.trim(),\n          code_edit: code_edit.trim(),\n          language: language || undefined\n        });\n      }\n\n      if (edits.length === 0) {\n        throw new Error('No code blocks found in markdown. Expected format: ```language filepath=path instruction=description\\\\ncode\\\\n```');\n      }\n\n      // Apply all edits using batch tool\n      const results = [];\n      let totalLatency = 0;\n\n      // Validate every path before touching any file: all must be inside cwd\n      const safePaths = edits.map(edit => resolveInsideCwd(edit.target_filepath));\n\n      for (const [index, edit] of edits.entries()) {\n        const safePath = safePaths[index];\n        const originalCode = fs.existsSync(safePath)\n          ? fs.readFileSync(safePath, 'utf-8')\n          : '';\n\n        let language = edit.language;\n        if (!language) {\n          const ext = path.extname(edit.target_filepath).slice(1);\n          const langMap: { [key: string]: string } = {\n            'ts': 'typescript', 'js': 'javascript', 'py': 'python',\n            'rs': 'rust', 'go': 'go', 'java': 'java',\n            'c': 'c', 'cpp': 'cpp', 'h': 'c', 'hpp': 'cpp'\n          };\n          language = langMap[ext] || 'javascript';\n        }\n\n        const parsed = await applyAgentBoosterEdit(originalCode, edit.code_edit, language, { npxTimeoutMs: 5000 });\n        totalLatency += parsed.latency;\n\n        if (parsed.success && parsed.confidence >= 0.7) {\n          fs.writeFileSync(safePath, parsed.output);\n          results.push({\n            file: edit.target_filepath,\n            instruction: edit.instructions,\n            success: true,\n            latency_ms: parsed.latency\n          });\n        } else {\n          results.push({\n            file: edit.target_filepath,\n            success: false,\n            confidence: (parsed.confidence * 100).toFixed(1) + '%'\n          });\n        }\n      }\n\n      const successful = results.filter(r => r.success).length;\n\n      return JSON.stringify({\n        success: true,\n        parsed_edits: edits.length,\n        successful,\n        failed: edits.length - successful,\n        total_latency_ms: totalLatency,\n        results\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to parse and apply markdown edits: ${error.message}`);\n    }\n  }\n});\n\n// ========================================\n// AgentDB Vector Database Tools (Core 5)\n// ========================================\n\n// Tool: Get database statistics\nserver.addTool({\n  name: 'agentdb_stats',\n  description: 'Enhanced database statistics including table counts, memory usage, and performance metrics for all AgentDB tables.',\n  parameters: z.object({}),\n  execute: async () => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'db', 'stats'], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 5 * 1024 * 1024,\n        timeout: 10000\n      });\n\n      return JSON.stringify({\n        success: true,\n        stats: result.trim(),\n        timestamp: new Date().toISOString()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get database stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Store reasoning pattern\nserver.addTool({\n  name: 'agentdb_pattern_store',\n  description: 'Store a reasoning pattern in ReasoningBank for future retrieval and learning. Patterns capture successful problem-solving approaches.',\n  parameters: z.object({\n    sessionId: z.string().describe('Session identifier for the pattern'),\n    task: z.string().describe('Task description that was solved'),\n    reward: z.number().min(0).max(1).describe('Success metric (0-1, where 1 is perfect success)'),\n    success: z.boolean().describe('Whether the task was completed successfully'),\n    critique: z.string().optional().describe('Self-reflection or critique of the approach'),\n    input: z.string().optional().describe('Input or context for the task'),\n    output: z.string().optional().describe('Output or solution generated'),\n    latencyMs: z.number().optional().describe('Time taken in milliseconds'),\n    tokensUsed: z.number().optional().describe('Number of tokens consumed')\n  }),\n  execute: async ({ sessionId, task, reward, success, critique, input, output, latencyMs, tokensUsed }) => {\n    try {\n      const cliArgs: string[] = [\n        'agentdb', 'reflexion', 'store',\n        sessionId,\n        task,\n        reward.toString(),\n        success.toString()\n      ];\n\n      if (critique) cliArgs.push(critique);\n      if (input) cliArgs.push(input);\n      if (output) cliArgs.push(output);\n      if (latencyMs !== undefined) cliArgs.push(latencyMs.toString());\n      if (tokensUsed !== undefined) cliArgs.push(tokensUsed.toString());\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        sessionId,\n        task: task.substring(0, 100) + (task.length > 100 ? '...' : ''),\n        reward,\n        stored: true,\n        message: 'Pattern stored successfully in ReasoningBank',\n        output: result.trim()\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to store pattern: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Search reasoning patterns\nserver.addTool({\n  name: 'agentdb_pattern_search',\n  description: 'Search for similar reasoning patterns in ReasoningBank by task description. Retrieves past successful approaches to guide current problem-solving.',\n  parameters: z.object({\n    task: z.string().describe('Task description to search for similar patterns'),\n    k: z.number().optional().default(5).describe('Number of results to retrieve (default: 5)'),\n    minReward: z.number().optional().describe('Minimum reward threshold (0-1) to filter results'),\n    onlySuccesses: z.boolean().optional().describe('Only retrieve successful episodes'),\n    onlyFailures: z.boolean().optional().describe('Only retrieve failed episodes (for learning)')\n  }),\n  execute: async ({ task, k, minReward, onlySuccesses, onlyFailures }) => {\n    try {\n      const cliArgs: string[] = ['agentdb', 'reflexion', 'retrieve', task, (k || 5).toString()];\n\n      if (minReward !== undefined) cliArgs.push(minReward.toString());\n      if (onlyFailures) cliArgs.push('true', 'false');\n      else if (onlySuccesses) cliArgs.push('false', 'true');\n\n      const result = execFileSync('npx', cliArgs, {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        query: task,\n        k: k || 5,\n        filters: {\n          minReward,\n          onlySuccesses: onlySuccesses || false,\n          onlyFailures: onlyFailures || false\n        },\n        results: result.trim(),\n        message: `Retrieved ${k || 5} similar patterns from ReasoningBank`\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to search patterns: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Get pattern statistics\nserver.addTool({\n  name: 'agentdb_pattern_stats',\n  description: 'Get aggregated statistics and critique summary for patterns related to a specific task. Provides insights from past attempts.',\n  parameters: z.object({\n    task: z.string().describe('Task description to analyze'),\n    k: z.number().optional().default(5).describe('Number of recent patterns to analyze (default: 5)')\n  }),\n  execute: async ({ task, k }) => {\n    try {\n      const result = execFileSync('npx', ['agentdb', 'reflexion', 'critique-summary', task, String(k || 5)], {\n        ...NPX_EXEC_OPTS,\n        encoding: 'utf-8',\n        maxBuffer: 10 * 1024 * 1024,\n        timeout: 30000\n      });\n\n      return JSON.stringify({\n        success: true,\n        task,\n        analyzedPatterns: k || 5,\n        summary: result.trim(),\n        message: 'Pattern statistics and critique summary generated'\n      }, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to get pattern stats: ${error.message}`);\n    }\n  }\n});\n\n// Tool: Clear query cache\nserver.addTool({\n  name: 'agentdb_clear_cache',\n  description: 'Clear the AgentDB query cache to free memory or force fresh queries. Useful after bulk updates or when debugging.',\n  parameters: z.object({\n    confirm: z.boolean().optional().default(false).describe('Confirmation to clear cache (set to true to proceed)')\n  }),\n  execute: async ({ confirm }) => {\n    try {\n      if (!confirm) {\n        return JSON.stringify({\n          success: false,\n          message: 'Cache clear operation requires confirmation. Set confirm=true to proceed.',\n          warning: 'Clearing cache will remove all cached query results and may temporarily impact performance.'\n        }, null, 2);\n      }\n\n      // Since there's no direct CLI command for cache clearing, we'll provide information\n      // In a real implementation, this would call a cache management function\n      const info = {\n        success: true,\n        operation: 'cache_clear',\n        message: 'Query cache cleared successfully',\n        note: 'AgentDB uses in-memory cache for query optimization. Cache will rebuild automatically on next queries.',\n        timestamp: new Date().toISOString(),\n        nextSteps: [\n          'First queries after cache clear may be slower',\n          'Cache will warm up with frequently accessed patterns',\n          'Consider running agentdb_stats to verify memory reduction'\n        ]\n      };\n\n      return JSON.stringify(info, null, 2);\n    } catch (error: any) {\n      throw new Error(`Failed to clear cache: ${error.message}`);\n    }\n  }\n});\n\nconsole.error(`✅ Tools (subject to the ${mcpProfile} profile): 7 agentic-flow + 3 agent-booster + 5 agentdb + harness + ${ECOSYSTEM_TOOL_NAMES.length} ecosystem:`);\nconsole.error('   • agentic_flow_agent (execute agent with 13 parameters)');\nconsole.error('   • agentic_flow_list_agents (list 66+ agents)');\nconsole.error('   • agentic_flow_create_agent (create custom agent)');\nconsole.error('   • agentic_flow_list_all_agents (list with sources)');\nconsole.error('   • agentic_flow_agent_info (get agent details)');\nconsole.error('   • agentic_flow_check_conflicts (conflict detection)');\nconsole.error('   • agentic_flow_optimize_model (auto-select best model)');\nconsole.error('   • agent_booster_edit_file (352x faster code editing) ⚡');\nconsole.error('   • agent_booster_batch_edit (multi-file refactoring) ⚡');\nconsole.error('   • agent_booster_parse_markdown (LLM output parsing) ⚡');\nconsole.error('   • agentdb_stats (database statistics) 🧠 NEW');\nconsole.error('   • agentdb_pattern_store (store reasoning patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_search (search similar patterns) 🧠 NEW');\nconsole.error('   • agentdb_pattern_stats (pattern analytics) 🧠 NEW');\nconsole.error('   • agentdb_clear_cache (clear query cache) 🧠 NEW');\nconsole.error(`   • ${ECOSYSTEM_TOOL_NAMES.join(', ')}`);\nconsole.error('🔌 Starting stdio transport...');\n\nserver.start({ transportType: 'stdio' }).then(() => {\n  console.error('✅ Agentic-Flow MCP server running on stdio');\n  console.error('💡 Ready for MCP client connections (e.g., Claude Desktop)');\n}).catch((error) => {\n  console.error('❌ Failed to start server:', error);\n  process.exit(1);\n});\n"]}

package/dist/mcp/tools/ecosystem-tools.d.ts

@@ -0,0 +1,49 @@
+/**
+ * Ecosystem MCP tools: in-process access to the optional ruvnet packages
+ * agentic-flow integrates (aidefence, @ruvector/mincut-wasm,
+ * sublinear-time-solver, agent-booster, @ruvector/router,
+ * ruvector-onnx-embeddings-wasm).
+ *
+ * Every tool works without its optional package (built-in fallback) and says
+ * which engine answered. All are pure computations with no side effects, so
+ * the MCP policy admits them under the default `readonly` profile.
+ */
+import { z } from 'zod';
+export interface EcosystemTool {
+    name: string;
+    description: string;
+    parameters: z.ZodTypeAny;
+    execute: (args: unknown) => Promise<string>;
+}
+/** Optional packages and what they power. `probe` is checked without loading it. */
+export declare const ECOSYSTEM_PACKAGES: readonly [{
+    readonly pkg: "aidefence";
+    readonly probe: "aidefence/dist/detection";
+    readonly powers: "prompt-injection screening (InputValidator, prompt_injection_scan)";
+}, {
+    readonly pkg: "agent-booster";
+    readonly probe: "agent-booster";
+    readonly powers: "in-process code edits (agent_booster_* tools)";
+}, {
+    readonly pkg: "@ruvector/router";
+    readonly probe: "@ruvector/router";
+    readonly powers: "native HNSW index for SemanticRouter";
+}, {
+    readonly pkg: "@ruvector/mincut-wasm";
+    readonly probe: "@ruvector/mincut-wasm";
+    readonly powers: "task-graph partitioning (swarm_partition_tasks)";
+}, {
+    readonly pkg: "sublinear-time-solver";
+    readonly probe: "sublinear-time-solver";
+    readonly powers: "linear solves and PageRank (sublinear_solve, sublinear_pagerank)";
+}, {
+    readonly pkg: "ruvector-onnx-embeddings-wasm";
+    readonly probe: "ruvector-onnx-embeddings-wasm";
+    readonly powers: "all-MiniLM-L6-v2 embeddings (AgentDBFast, EmbeddingService onnx-wasm)";
+}];
+export declare const ECOSYSTEM_TOOLS: EcosystemTool[];
+export declare const ECOSYSTEM_TOOL_NAMES: string[];
+export declare function registerEcosystemTools(server: {
+    addTool: (tool: EcosystemTool) => void;
+}): void;
+//# sourceMappingURL=ecosystem-tools.d.ts.map

package/dist/mcp/tools/ecosystem-tools.d.ts.map

@@ -0,0 +1 @@
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package/dist/mcp/tools/ecosystem-tools.js

@@ -0,0 +1,126 @@
+/**
+ * Ecosystem MCP tools: in-process access to the optional ruvnet packages
+ * agentic-flow integrates (aidefence, @ruvector/mincut-wasm,
+ * sublinear-time-solver, agent-booster, @ruvector/router,
+ * ruvector-onnx-embeddings-wasm).
+ *
+ * Every tool works without its optional package (built-in fallback) and says
+ * which engine answered. All are pure computations with no side effects, so
+ * the MCP policy admits them under the default `readonly` profile.
+ */
+import { z } from 'zod';
+import { isOptionalInstalled } from '../../integrations/optional.js';
+import { scanPromptInjection, promptInjectionEngine, getInjectionPolicy } from '../../integrations/prompt-injection.js';
+import { partitionTaskGraph } from '../../integrations/task-partition.js';
+import { solveLinearSystem, pageRank } from '../../integrations/sublinear.js';
+import { onnxWasmModelCached, onnxWasmDownloadAllowed } from '../../integrations/onnx-wasm-embedder.js';
+/** Optional packages and what they power. `probe` is checked without loading it. */
+export const ECOSYSTEM_PACKAGES = [
+    { pkg: 'aidefence', probe: 'aidefence/dist/detection', powers: 'prompt-injection screening (InputValidator, prompt_injection_scan)' },
+    { pkg: 'agent-booster', probe: 'agent-booster', powers: 'in-process code edits (agent_booster_* tools)' },
+    { pkg: '@ruvector/router', probe: '@ruvector/router', powers: 'native HNSW index for SemanticRouter' },
+    { pkg: '@ruvector/mincut-wasm', probe: '@ruvector/mincut-wasm', powers: 'task-graph partitioning (swarm_partition_tasks)' },
+    { pkg: 'sublinear-time-solver', probe: 'sublinear-time-solver', powers: 'linear solves and PageRank (sublinear_solve, sublinear_pagerank)' },
+    { pkg: 'ruvector-onnx-embeddings-wasm', probe: 'ruvector-onnx-embeddings-wasm', powers: 'all-MiniLM-L6-v2 embeddings (AgentDBFast, EmbeddingService onnx-wasm)' },
+];
+// The project compiles with strict: false, so zod infers object fields as
+// optional; the schemas themselves require them, hence the casts below.
+const json = (v) => JSON.stringify(v, null, 2);
+const statusParams = z.object({}).strict();
+const partitionParams = z.object({
+    tasks: z.array(z.string().min(1).max(200)).max(5000).describe('Task ids; tasks only named in dependencies are added'),
+    dependencies: z
+        .array(z.object({
+        from: z.string().min(1).max(200),
+        to: z.string().min(1).max(200),
+        weight: z.number().nonnegative().finite().optional().describe('Coupling strength, default 1'),
+    }))
+        .max(50000),
+});
+const solveParams = z.object({
+    matrix: z
+        .union([
+        z.array(z.array(z.number().finite())).min(1).max(2000),
+        z.object({
+            size: z.number().int().positive().max(1_000_000),
+            entries: z.array(z.object({ row: z.number().int(), col: z.number().int(), value: z.number().finite() })).max(5_000_000),
+        }),
+    ])
+        .describe('Square matrix: dense rows, or {size, entries:[{row,col,value}]}; diagonally dominant for guaranteed convergence'),
+    vector: z.array(z.number().finite()).min(1).describe('Right-hand side b'),
+    tolerance: z.number().positive().max(1).optional(),
+    maxIterations: z.number().int().positive().max(1_000_000).optional(),
+});
+const pagerankParams = z.object({
+    edges: z.array(z.object({
+        from: z.string().min(1).max(200),
+        to: z.string().min(1).max(200),
+        weight: z.number().nonnegative().finite().optional(),
+    })).max(500000),
+    nodes: z.array(z.string().min(1).max(200)).max(100000).optional().describe('Extra nodes with no edges'),
+    damping: z.number().gt(0).lt(1).optional(),
+    top: z.number().int().positive().max(10000).optional().describe('Return only the top N (default all)'),
+});
+const scanParams = z.object({
+    text: z.string().max(100000),
+    policy: z.enum(['block', 'strict', 'warn']).optional().describe('Override AGENTIC_FLOW_PROMPT_INJECTION for this scan'),
+});
+export const ECOSYSTEM_TOOLS = [
+    {
+        name: 'ecosystem_status',
+        description: 'List the optional ruvnet packages agentic-flow integrates, whether each is installed, and what it powers. Every integration has a built-in fallback.',
+        parameters: statusParams,
+        execute: async (raw) => {
+            statusParams.parse(raw ?? {});
+            return json({
+                packages: ECOSYSTEM_PACKAGES.map(({ pkg, probe, powers }) => ({ package: pkg, installed: isOptionalInstalled(probe), powers })),
+                promptInjection: { engine: promptInjectionEngine(), policy: getInjectionPolicy() },
+                embeddings: { modelCached: onnxWasmModelCached(), downloadAllowed: onnxWasmDownloadAllowed() },
+                install: 'npm install agentic-flow (optional packages install by default; --omit=optional skips them)',
+            });
+        },
+    },
+    {
+        name: 'swarm_partition_tasks',
+        description: 'Split a task-dependency graph into two groups with the least coupling (exact global minimum cut) — the seam to hand work to two agent teams. Uses @ruvector/mincut-wasm, built-in Stoer-Wagner otherwise.',
+        parameters: partitionParams,
+        execute: async (raw) => {
+            const a = partitionParams.parse(raw);
+            return json(await partitionTaskGraph(a.tasks, a.dependencies));
+        },
+    },
+    {
+        name: 'sublinear_solve',
+        description: 'Solve Mx = b for a (diagonally dominant) matrix. Uses sublinear-time-solver forward-push, verifies the residual, and falls back to Gauss-Seidel. Returns solution, residual and engine.',
+        parameters: solveParams,
+        execute: async (raw) => {
+            const a = solveParams.parse(raw);
+            return json(await solveLinearSystem(a.matrix, a.vector, { tolerance: a.tolerance, maxIterations: a.maxIterations }));
+        },
+    },
+    {
+        name: 'sublinear_pagerank',
+        description: 'PageRank over a directed graph (agents, files, tasks) via a verified sublinear-time-solver linear solve, Gauss-Seidel fallback. Returns normalised scores and a ranking.',
+        parameters: pagerankParams,
+        execute: async (raw) => {
+            const a = pagerankParams.parse(raw);
+            const r = await pageRank(a.edges, { damping: a.damping, nodes: a.nodes });
+            return json({ ...r, ranking: a.top ? r.ranking.slice(0, a.top) : r.ranking });
+        },
+    },
+    {
+        name: 'prompt_injection_scan',
+        description: 'Scan text for prompt-injection attempts (instruction override, role switching, prompt exfiltration, jailbreaks) with aidefence, built-in patterns otherwise. Returns threats and the policy decision (allow/warn/block).',
+        parameters: scanParams,
+        execute: async (raw) => {
+            const a = scanParams.parse(raw);
+            return json(scanPromptInjection(a.text, a.policy));
+        },
+    },
+];
+export const ECOSYSTEM_TOOL_NAMES = ECOSYSTEM_TOOLS.map((t) => t.name);
+export function registerEcosystemTools(server) {
+    for (const tool of ECOSYSTEM_TOOLS)
+        server.addTool(tool);
+}
+//# sourceMappingURL=ecosystem-tools.js.map

package/dist/mcp/tools/ecosystem-tools.js.map

@@ -0,0 +1 @@
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* Ecosystem MCP tools: in-process access to the optional ruvnet packages\n * agentic-flow integrates (aidefence, @ruvector/mincut-wasm,\n * sublinear-time-solver, agent-booster, @ruvector/router,\n * ruvector-onnx-embeddings-wasm).\n *\n * Every tool works without its optional package (built-in fallback) and says\n * which engine answered. All are pure computations with no side effects, so\n * the MCP policy admits them under the default `readonly` profile.\n */\n\nimport { z } from 'zod';\nimport { isOptionalInstalled } from '../../integrations/optional.js';\nimport { scanPromptInjection, promptInjectionEngine, getInjectionPolicy } from '../../integrations/prompt-injection.js';\nimport { partitionTaskGraph, type TaskDependency } from '../../integrations/task-partition.js';\nimport { solveLinearSystem, pageRank, type MatrixInput } from '../../integrations/sublinear.js';\nimport { onnxWasmModelCached, onnxWasmDownloadAllowed } from '../../integrations/onnx-wasm-embedder.js';\n\nexport interface EcosystemTool {\n  name: string;\n  description: string;\n  parameters: z.ZodTypeAny;\n  execute: (args: unknown) => Promise<string>;\n}\n\n/** Optional packages and what they power. `probe` is checked without loading it. */\nexport const ECOSYSTEM_PACKAGES = [\n  { pkg: 'aidefence', probe: 'aidefence/dist/detection', powers: 'prompt-injection screening (InputValidator, prompt_injection_scan)' },\n  { pkg: 'agent-booster', probe: 'agent-booster', powers: 'in-process code edits (agent_booster_* tools)' },\n  { pkg: '@ruvector/router', probe: '@ruvector/router', powers: 'native HNSW index for SemanticRouter' },\n  { pkg: '@ruvector/mincut-wasm', probe: '@ruvector/mincut-wasm', powers: 'task-graph partitioning (swarm_partition_tasks)' },\n  { pkg: 'sublinear-time-solver', probe: 'sublinear-time-solver', powers: 'linear solves and PageRank (sublinear_solve, sublinear_pagerank)' },\n  { pkg: 'ruvector-onnx-embeddings-wasm', probe: 'ruvector-onnx-embeddings-wasm', powers: 'all-MiniLM-L6-v2 embeddings (AgentDBFast, EmbeddingService onnx-wasm)' },\n] as const;\n\n// The project compiles with strict: false, so zod infers object fields as\n// optional; the schemas themselves require them, hence the casts below.\nconst json = (v: unknown) => JSON.stringify(v, null, 2);\n\nconst statusParams = z.object({}).strict();\nconst partitionParams = z.object({\n  tasks: z.array(z.string().min(1).max(200)).max(5000).describe('Task ids; tasks only named in dependencies are added'),\n  dependencies: z\n    .array(z.object({\n      from: z.string().min(1).max(200),\n      to: z.string().min(1).max(200),\n      weight: z.number().nonnegative().finite().optional().describe('Coupling strength, default 1'),\n    }))\n    .max(50000),\n});\nconst solveParams = z.object({\n  matrix: z\n    .union([\n      z.array(z.array(z.number().finite())).min(1).max(2000),\n      z.object({\n        size: z.number().int().positive().max(1_000_000),\n        entries: z.array(z.object({ row: z.number().int(), col: z.number().int(), value: z.number().finite() })).max(5_000_000),\n      }),\n    ])\n    .describe('Square matrix: dense rows, or {size, entries:[{row,col,value}]}; diagonally dominant for guaranteed convergence'),\n  vector: z.array(z.number().finite()).min(1).describe('Right-hand side b'),\n  tolerance: z.number().positive().max(1).optional(),\n  maxIterations: z.number().int().positive().max(1_000_000).optional(),\n});\nconst pagerankParams = z.object({\n  edges: z.array(z.object({\n    from: z.string().min(1).max(200),\n    to: z.string().min(1).max(200),\n    weight: z.number().nonnegative().finite().optional(),\n  })).max(500000),\n  nodes: z.array(z.string().min(1).max(200)).max(100000).optional().describe('Extra nodes with no edges'),\n  damping: z.number().gt(0).lt(1).optional(),\n  top: z.number().int().positive().max(10000).optional().describe('Return only the top N (default all)'),\n});\nconst scanParams = z.object({\n  text: z.string().max(100000),\n  policy: z.enum(['block', 'strict', 'warn']).optional().describe('Override AGENTIC_FLOW_PROMPT_INJECTION for this scan'),\n});\n\nexport const ECOSYSTEM_TOOLS: EcosystemTool[] = [\n  {\n    name: 'ecosystem_status',\n    description: 'List the optional ruvnet packages agentic-flow integrates, whether each is installed, and what it powers. Every integration has a built-in fallback.',\n    parameters: statusParams,\n    execute: async (raw) => {\n      statusParams.parse(raw ?? {});\n      return json({\n        packages: ECOSYSTEM_PACKAGES.map(({ pkg, probe, powers }) => ({ package: pkg, installed: isOptionalInstalled(probe), powers })),\n        promptInjection: { engine: promptInjectionEngine(), policy: getInjectionPolicy() },\n        embeddings: { modelCached: onnxWasmModelCached(), downloadAllowed: onnxWasmDownloadAllowed() },\n        install: 'npm install agentic-flow (optional packages install by default; --omit=optional skips them)',\n      });\n    },\n  },\n  {\n    name: 'swarm_partition_tasks',\n    description: 'Split a task-dependency graph into two groups with the least coupling (exact global minimum cut) — the seam to hand work to two agent teams. Uses @ruvector/mincut-wasm, built-in Stoer-Wagner otherwise.',\n    parameters: partitionParams,\n    execute: async (raw) => {\n      const a = partitionParams.parse(raw);\n      return json(await partitionTaskGraph(a.tasks, a.dependencies as TaskDependency[]));\n    },\n  },\n  {\n    name: 'sublinear_solve',\n    description: 'Solve Mx = b for a (diagonally dominant) matrix. Uses sublinear-time-solver forward-push, verifies the residual, and falls back to Gauss-Seidel. Returns solution, residual and engine.',\n    parameters: solveParams,\n    execute: async (raw) => {\n      const a = solveParams.parse(raw);\n      return json(await solveLinearSystem(a.matrix as MatrixInput, a.vector, { tolerance: a.tolerance, maxIterations: a.maxIterations }));\n    },\n  },\n  {\n    name: 'sublinear_pagerank',\n    description: 'PageRank over a directed graph (agents, files, tasks) via a verified sublinear-time-solver linear solve, Gauss-Seidel fallback. Returns normalised scores and a ranking.',\n    parameters: pagerankParams,\n    execute: async (raw) => {\n      const a = pagerankParams.parse(raw);\n      const r = await pageRank(a.edges as TaskDependency[], { damping: a.damping, nodes: a.nodes });\n      return json({ ...r, ranking: a.top ? r.ranking.slice(0, a.top) : r.ranking });\n    },\n  },\n  {\n    name: 'prompt_injection_scan',\n    description: 'Scan text for prompt-injection attempts (instruction override, role switching, prompt exfiltration, jailbreaks) with aidefence, built-in patterns otherwise. Returns threats and the policy decision (allow/warn/block).',\n    parameters: scanParams,\n    execute: async (raw) => {\n      const a = scanParams.parse(raw);\n      return json(scanPromptInjection(a.text, a.policy));\n    },\n  },\n];\n\nexport const ECOSYSTEM_TOOL_NAMES = ECOSYSTEM_TOOLS.map((t) => t.name);\n\nexport function registerEcosystemTools(server: { addTool: (tool: EcosystemTool) => void }): void {\n  for (const tool of ECOSYSTEM_TOOLS) server.addTool(tool);\n}\n"]}