agentic-flow 2.0.3 → 2.0.5

package/.claude/agents/test-neural.md

@@ -0,0 +1,14 @@
+# Test Neural Agent
+
+Test agent for validating neural network tool access.
+
+## System Prompt
+You are a test agent for validating access to claude-flow MCP tools, specifically neural network training tools. When asked to test neural tools, use neural_train to train a convergent thinking pattern and report the results.
+
+## Capabilities
+- Neural network tool testing
+- MCP tool validation
+- Tool access verification
+
+## Description
+Test agent for neural tool validation

package/.claude/settings.json

@@ -5,125 +5,14 @@
     "CLAUDE_FLOW_HOOKS_ENABLED": "true",
     "CLAUDE_FLOW_TELEMETRY_ENABLED": "true",
     "CLAUDE_FLOW_REMOTE_EXECUTION": "true",
-    "CLAUDE_FLOW_CHECKPOINTS_ENABLED": "true",
-    "CLAUDE_FLOW_WORKERS_ENABLED": "true",
-    "CLAUDE_FLOW_WORKER_PARALLEL": "true",
-    "CLAUDE_FLOW_MODEL_CACHE_MB": "512",
-    "CLAUDE_FLOW_SUPPRESS_WARNINGS": "true"
-  },
-  "workers": {
-    "enabled": true,
-    "parallel": true,
-    "maxConcurrent": 10,
-    "maxPerTrigger": 3,
-    "defaultTimeout": 300000,
-    "memoryDepositEnabled": true,
-    "progressEventsEnabled": true,
-    "triggers": {
-      "ultralearn": { "priority": "high", "timeout": 300000, "maxAgents": 5 },
-      "optimize": { "priority": "medium", "timeout": 180000, "maxAgents": 2 },
-      "consolidate": { "priority": "low", "timeout": 120000, "maxAgents": 1 },
-      "predict": { "priority": "medium", "timeout": 60000, "maxAgents": 2 },
-      "audit": { "priority": "high", "timeout": 300000, "maxAgents": 3 },
-      "map": { "priority": "medium", "timeout": 240000, "maxAgents": 2 },
-      "preload": { "priority": "low", "timeout": 30000, "maxAgents": 1 },
-      "deepdive": { "priority": "high", "timeout": 600000, "maxAgents": 4 },
-      "document": { "priority": "low", "timeout": 180000, "maxAgents": 2 },
-      "refactor": { "priority": "medium", "timeout": 120000, "maxAgents": 2 },
-      "benchmark": { "priority": "medium", "timeout": 180000, "maxAgents": 2 },
-      "testgaps": { "priority": "medium", "timeout": 120000, "maxAgents": 2 }
-    },
-    "agentMappings": {
-      "ultralearn": ["researcher", "coder"],
-      "optimize": ["performance-analyzer", "coder"],
-      "audit": ["security-analyst", "tester"],
-      "benchmark": ["performance-analyzer"],
-      "testgaps": ["tester"],
-      "document": ["documenter", "researcher"],
-      "deepdive": ["researcher", "security-analyst"],
-      "refactor": ["coder", "reviewer"],
-      "map": ["researcher"],
-      "preload": ["researcher"],
-      "predict": ["performance-analyzer"],
-      "consolidate": ["researcher"]
-    }
-  },
-  "performance": {
-    "modelCache": {
-      "enabled": true,
-      "maxSizeMB": 512,
-      "evictionPolicy": "lru"
-    },
-    "benchmarkThresholds": {
-      "triggerDetection": { "p95Ms": 5 },
-      "workerRegistry": { "p95Ms": 10 },
-      "agentSelection": { "p95Ms": 1 },
-      "memoryKeyGeneration": { "p95Ms": 0.1 },
-      "concurrentWorkers": { "totalMs": 1000 }
-    },
-    "optimizations": {
-      "parallelDispatch": true,
-      "batchMemoryWrites": true,
-      "cacheEmbeddings": true,
-      "suppressWarnings": true
-    }
-  },
-  "agents": {
-    "presets": {
-      "quick-scan": {
-        "phases": ["file-discovery", "pattern-discovery", "summarization"],
-        "timeout": 60000,
-        "priority": "low"
-      },
-      "deep-analysis": {
-        "phases": ["file-discovery", "static-analysis", "complexity-analysis", "pattern-extraction", "summarization"],
-        "timeout": 300000,
-        "priority": "high"
-      },
-      "security-scan": {
-        "phases": ["file-discovery", "security-analysis", "secret-detection", "summarization"],
-        "timeout": 180000,
-        "priority": "critical"
-      },
-      "learning": {
-        "phases": ["file-discovery", "pattern-extraction", "vectorization", "sona-training", "pattern-storage"],
-        "timeout": 300000,
-        "priority": "medium"
-      },
-      "api-docs": {
-        "phases": ["api-discovery", "pattern-extraction", "report-generation", "indexing"],
-        "timeout": 180000,
-        "priority": "low"
-      },
-      "test-analysis": {
-        "phases": ["file-discovery", "pattern-discovery", "coverage-analysis", "summarization"],
-        "timeout": 120000,
-        "priority": "medium"
-      }
-    },
-    "capabilities": {
-      "default": {
-        "onnxEmbeddings": true,
-        "vectorDb": true,
-        "sonaLearning": true,
-        "reasoningBank": true,
-        "intelligenceStore": true,
-        "progressEvents": true,
-        "memoryDeposits": true,
-        "persistResults": true
-      }
-    }
+    "CLAUDE_FLOW_CHECKPOINTS_ENABLED": "true"
   },
   "permissions": {
     "allow": [
       "Bash(npx claude-flow *)",
-      "Bash(npx agentic-flow *)",
       "Bash(npm run lint)",
       "Bash(npm run test:*)",
       "Bash(npm test *)",
-      "Bash(npm run build)",
-      "Bash(npm run benchmark)",
-      "Bash(npm run workers *)",
       "Bash(git status)",
       "Bash(git diff *)",
       "Bash(git log *)",
@@ -139,10 +28,7 @@
       "Bash(node *)",
       "Bash(which *)",
       "Bash(pwd)",
-      "Bash(ls *)",
-      "mcp__ruv-swarm",
-      "mcp__claude-flow@alpha",
-      "mcp__flow-nexus"
+      "Bash(ls *)"
     ],
     "deny": [
       "Bash(rm -rf /)",
@@ -152,23 +38,13 @@
     ]
   },
   "hooks": {
-    "UserPromptSubmit": [
-      {
-        "hooks": [
-          {
-            "type": "command",
-            "command": "cat | jq -r '.user_prompt // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha workers dispatch --prompt '{}' --parallel true 2>/dev/null || true"
-          }
-        ]
-      }
-    ],
     "PreToolUse": [
       {
         "matcher": "Bash",
         "hooks": [
           {
             "type": "command",
-            "command": "cat | jq -r '.tool_input.command // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks pre-command --command '{}' --validate-safety true --prepare-resources true 2>/dev/null || true"
+            "command": "cat | jq -r '.tool_input.command // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks pre-command --command '{}' --validate-safety true --prepare-resources true"
           }
         ]
       },
@@ -177,7 +53,7 @@
         "hooks": [
           {
             "type": "command",
-            "command": "cat | jq -r '.tool_input.file_path // .tool_input.path // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks pre-edit --file '{}' --auto-assign-agents true --load-context true 2>/dev/null || true"
+            "command": "cat | jq -r '.tool_input.file_path // .tool_input.path // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks pre-edit --file '{}' --auto-assign-agents true --load-context true"
           }
         ]
       }
@@ -188,7 +64,7 @@
         "hooks": [
           {
             "type": "command",
-            "command": "cat | jq -r '.tool_input.command // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks post-command --command '{}' --track-metrics true --store-results true 2>/dev/null || true"
+            "command": "cat | jq -r '.tool_input.command // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks post-command --command '{}' --track-metrics true --store-results true"
           }
         ]
       },
@@ -197,7 +73,7 @@
         "hooks": [
           {
             "type": "command",
-            "command": "cat | jq -r '.tool_input.file_path // .tool_input.path // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks post-edit --file '{}' --format true --update-memory true 2>/dev/null || true"
+            "command": "cat | jq -r '.tool_input.file_path // .tool_input.path // empty' | tr '\\n' '\\0' | xargs -0 -I {} npx claude-flow@alpha hooks post-edit --file '{}' --format true --update-memory true"
           }
         ]
       }
@@ -208,7 +84,7 @@
         "hooks": [
           {
             "type": "command",
-            "command": "/bin/bash -c 'echo \"🔄 PreCompact: Check CLAUDE.md for 54 agents, swarm patterns, SPARC workflows\"; echo \"✅ Ready for compact\"'"
+            "command": "/bin/bash -c 'INPUT=$(cat); CUSTOM=$(echo \"$INPUT\" | jq -r \".custom_instructions // \\\"\\\"\"); echo \"🔄 PreCompact Guidance:\"; echo \"📋 IMPORTANT: Review CLAUDE.md in project root for:\"; echo \"   • 54 available agents and concurrent usage patterns\"; echo \"   • Swarm coordination strategies (hierarchical, mesh, adaptive)\"; echo \"   • SPARC methodology workflows with batchtools optimization\"; echo \"   • Critical concurrent execution rules (GOLDEN RULE: 1 MESSAGE = ALL OPERATIONS)\"; if [ -n \"$CUSTOM\" ]; then echo \"🎯 Custom compact instructions: $CUSTOM\"; fi; echo \"✅ Ready for compact operation\"'"
           }
         ]
       },
@@ -217,7 +93,7 @@
         "hooks": [
           {
             "type": "command",
-            "command": "/bin/bash -c 'echo \"🔄 Auto-Compact: Preserving agent/worker context\"; echo \"✅ Auto-compact proceeding\"'"
+            "command": "/bin/bash -c 'echo \"🔄 Auto-Compact Guidance (Context Window Full):\"; echo \"📋 CRITICAL: Before compacting, ensure you understand:\"; echo \"   • All 54 agents available in .claude/agents/ directory\"; echo \"   • Concurrent execution patterns from CLAUDE.md\"; echo \"   • Batchtools optimization for 300% performance gains\"; echo \"   • Swarm coordination strategies for complex tasks\"; echo \"⚡ Apply GOLDEN RULE: Always batch operations in single messages\"; echo \"✅ Auto-compact proceeding with full agent context\"'"
           }
         ]
       }
@@ -227,7 +103,7 @@
         "hooks": [
           {
             "type": "command",
-            "command": "npx claude-flow@alpha hooks session-end --generate-summary true --persist-state true --export-metrics true 2>/dev/null || true"
+            "command": "npx claude-flow@alpha hooks session-end --generate-summary true --persist-state true --export-metrics true"
           }
         ]
       }