npm - agentic-flow - Versions diffs - 1.9.0 → 1.9.1 - Mend

agentic-flow 1.9.0 → 1.9.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (1223) hide show

package/docs/features/agentdb/CLI_GUIDE.md DELETED Viewed

@@ -1,826 +0,0 @@
-# AgentDB CLI Guide - Frontier Features
-Complete command-line interface for AgentDB's state-of-the-art memory features.
-## Installation
-```bash
-npm install -g agentic-flow@latest
-# or
-npx agentic-flow agentdb <command>
-```
-## Quick Start
-```bash
-# Set database path (optional, defaults to ./agentdb.db)
-export AGENTDB_PATH="./my-agent-memory.db"
-# Add a causal edge
-npx agentdb causal add-edge "add_tests" "code_quality" 0.25
-# Run nightly learner to discover patterns
-npx agentdb learner run
-# Query with causal utility
-npx agentdb recall with-certificate "implement authentication"
-```
----
-## Causal Commands
-### `causal add-edge`
-Manually add a causal relationship between two variables.
-**Syntax:**
-```bash
-agentdb causal add-edge <cause> <effect> <uplift> [confidence] [sample-size]
-```
-**Parameters:**
-- `cause` - Cause variable (string)
-- `effect` - Effect variable (string)
-- `uplift` - Causal effect size (number, e.g., 0.25 = 25% improvement)
-- `confidence` - Statistical confidence (optional, default: 0.95)
-- `sample-size` - Number of observations (optional, default: 0)
-**Example:**
-```bash
-# Adding tests improves code quality by 25% with 95% confidence
-agentdb causal add-edge "add_tests" "code_quality" 0.25 0.95 100
-```
----
-### `causal experiment create`
-Create a new A/B experiment to test a hypothesis.
-**Syntax:**
-```bash
-agentdb causal experiment create <name> <cause> <effect>
-```
-**Parameters:**
-- `name` - Experiment name (string)
-- `cause` - Treatment variable (string)
-- `effect` - Outcome variable (string)
-**Example:**
-```bash
-# Test if code reviews reduce bug rate
-agentdb causal experiment create "code-review-bugs" "code_review" "bug_rate"
-```
----
-### `causal experiment add-observation`
-Record an observation in an A/B experiment.
-**Syntax:**
-```bash
-agentdb causal experiment add-observation <experiment-id> <is-treatment> <outcome> [context]
-```
-**Parameters:**
-- `experiment-id` - Experiment ID (number)
-- `is-treatment` - Treatment group flag (true/false)
-- `outcome` - Observed outcome value (number)
-- `context` - Additional context JSON (optional, string)
-**Example:**
-```bash
-# Treatment group: code review done, outcome: 0.12 bugs/KLOC
-agentdb causal experiment add-observation 1 true 0.12 '{"reviewer": "senior"}'
-# Control group: no code review, outcome: 0.35 bugs/KLOC
-agentdb causal experiment add-observation 1 false 0.35 '{"reviewer": "none"}'
-```
----
-### `causal experiment calculate`
-Calculate uplift and statistical significance for an experiment.
-**Syntax:**
-```bash
-agentdb causal experiment calculate <experiment-id>
-```
-**Parameters:**
-- `experiment-id` - Experiment ID (number)
-**Example:**
-```bash
-agentdb causal experiment calculate 1
-```
-**Output:**
-```
-📈 Calculating Uplift
-ℹ Treatment Mean: 0.120
-ℹ Control Mean: 0.350
-✅ Uplift: -0.230 (65.7% reduction)
-ℹ 95% CI: [-0.280, -0.180]
-ℹ p-value: 0.0001
-ℹ Sample Sizes: 50 treatment, 50 control
-✅ Result is statistically significant (p < 0.05)
-```
----
-### `causal query`
-Query causal edges with filters.
-**Syntax:**
-```bash
-agentdb causal query [cause] [effect] [min-confidence] [min-uplift] [limit]
-```
-**Parameters:**
-- `cause` - Filter by cause (optional, string)
-- `effect` - Filter by effect (optional, string)
-- `min-confidence` - Minimum confidence (optional, default: 0.7)
-- `min-uplift` - Minimum uplift magnitude (optional, default: 0.1)
-- `limit` - Max results (optional, default: 10)
-**Examples:**
-```bash
-# All high-confidence edges
-agentdb causal query "" "" 0.8
-# Edges affecting code quality
-agentdb causal query "" "code_quality" 0.7
-# Effects of adding tests
-agentdb causal query "add_tests" "" 0.7 0.1 5
-```
----
-## Recall Commands
-### `recall with-certificate`
-Retrieve episodes with causal utility and provenance certificate.
-**Syntax:**
-```bash
-agentdb recall with-certificate <query> [k] [alpha] [beta] [gamma]
-```
-**Parameters:**
-- `query` - Search query (string)
-- `k` - Number of results (optional, default: 12)
-- `alpha` - Similarity weight (optional, default: 0.7)
-- `beta` - Uplift weight (optional, default: 0.2)
-- `gamma` - Latency penalty (optional, default: 0.1)
-**Utility Formula:**
-```
-U = α * similarity + β * uplift - γ * latency_cost
-```
-**Examples:**
-```bash
-# Default weights: 70% similarity, 20% causal uplift, 10% latency penalty
-agentdb recall with-certificate "implement authentication" 10
-# Prioritize causal impact over similarity
-agentdb recall with-certificate "fix bug" 12 0.5 0.4 0.1
-# Pure similarity (no causal ranking)
-agentdb recall with-certificate "refactor code" 10 1.0 0.0 0.0
-```
-**Output:**
-```
-🔍 Causal Recall with Certificate
-ℹ Query: "implement authentication"
-ℹ k: 10
-================================================================================
-Results (10)
-================================================================================
-#1: Episode 142
-  Task: implement_oauth2_authentication
-  Similarity: 0.892
-  Uplift: 0.156
-  Utility: 0.735
-  Reward: 0.88
-#2: Episode 89
-  Task: add_jwt_tokens
-  Similarity: 0.845
-  Uplift: 0.203
-  Utility: 0.733
-  Reward: 0.91
-...
-================================================================================
-ℹ Certificate ID: cert-1729512345-abc123
-ℹ Provenance Hash: 2f7a8e1d3c4b9...
-ℹ Retrieved at: 2025-10-21T14:25:45.123Z
-✅ Completed in 75ms
-```
----
-## Learner Commands
-### `learner run`
-Discover causal edges from episode patterns using doubly robust estimator.
-**Syntax:**
-```bash
-agentdb learner run [min-attempts] [min-success-rate] [min-confidence] [dry-run]
-```
-**Parameters:**
-- `min-attempts` - Minimum episode attempts per pattern (optional, default: 3)
-- `min-success-rate` - Minimum success rate (optional, default: 0.6)
-- `min-confidence` - Minimum statistical confidence (optional, default: 0.7)
-- `dry-run` - Preview without saving (optional, "true"/"false", default: false)
-**Algorithm:**
-Uses doubly robust causal estimator:
-```
-τ̂(x) = μ₁(x) - μ₀(x) + [a*(y-μ₁(x))/e(x)] - [(1-a)*(y-μ₀(x))/(1-e(x))]
-```
-**Examples:**
-```bash
-# Default: conservative discovery
-agentdb learner run
-# Aggressive discovery (lower thresholds)
-agentdb learner run 2 0.5 0.6
-# Preview mode (don't save edges)
-agentdb learner run 3 0.6 0.7 true
-# High-confidence only
-agentdb learner run 5 0.7 0.9
-```
-**Output:**
-```
-🌙 Running Nightly Learner
-ℹ Min Attempts: 3
-ℹ Min Success Rate: 0.6
-ℹ Min Confidence: 0.7
-✅ Discovered 12 causal edges in 8.3s
-================================================================================
-#1: add_error_handling → code_stability
-  Uplift: 0.234 (CI: 0.88)
-  Sample size: 47
-─────────────────────────────────────────────────────────────────────────────
-#2: write_tests → bug_detection_early
-  Uplift: 0.189 (CI: 0.82)
-  Sample size: 35
-...
-```
----
-### `learner prune`
-Remove low-quality or stale causal edges.
-**Syntax:**
-```bash
-agentdb learner prune [min-confidence] [min-uplift] [max-age-days]
-```
-**Parameters:**
-- `min-confidence` - Minimum confidence to keep (optional, default: 0.5)
-- `min-uplift` - Minimum uplift magnitude (optional, default: 0.05)
-- `max-age-days` - Maximum age in days (optional, default: 90)
-**Examples:**
-```bash
-# Conservative pruning (keep most edges)
-agentdb learner prune
-# Aggressive pruning
-agentdb learner prune 0.7 0.1 30
-# Remove old edges only
-agentdb learner prune 0.0 0.0 60
-```
----
-## Reflexion Commands
-### `reflexion store`
-Store an episode with self-critique for agent self-improvement.
-**Syntax:**
-```bash
-agentdb reflexion store <session-id> <task> <reward> <success> [critique] [input] [output] [latency-ms] [tokens]
-```
-**Parameters:**
-- `session-id` - Session identifier (string)
-- `task` - Task description (string)
-- `reward` - Reward score 0-1 (number)
-- `success` - Task success flag (true/false)
-- `critique` - Self-critique or lesson learned (optional, string)
-- `input` - Task input data (optional, string)
-- `output` - Task output data (optional, string)
-- `latency-ms` - Execution time in ms (optional, number)
-- `tokens` - Tokens consumed (optional, number)
-**Example:**
-```bash
-# Store successful authentication implementation
-agentdb reflexion store "session-1" "implement_oauth2" 0.95 true \
-  "Used industry-standard OAuth2 flow with refresh tokens" \
-  "Requirements: secure authentication" \
-  "JWT-based OAuth2 implementation"
-# Store failed attempt with critique
-agentdb reflexion store "session-2" "fix_memory_leak" 0.3 false \
-  "Forgot to cleanup event listeners - must always call removeEventListener()" \
-  "Memory growing unbounded" \
-  "Attempted fix with WeakMap but missed cleanup"
-```
----
-### `reflexion retrieve`
-Retrieve relevant past episodes for learning from experience.
-**Syntax:**
-```bash
-agentdb reflexion retrieve <task> [k] [min-reward] [only-failures] [only-successes]
-```
-**Parameters:**
-- `task` - Query task (string)
-- `k` - Number of episodes to retrieve (optional, default: 10)
-- `min-reward` - Minimum reward threshold (optional, default: 0.0)
-- `only-failures` - Return only failures (optional, true/false)
-- `only-successes` - Return only successes (optional, true/false)
-**Examples:**
-```bash
-# Get top 10 authentication episodes
-agentdb reflexion retrieve "implement authentication" 10
-# Get only successful episodes with high reward
-agentdb reflexion retrieve "bug fix" 20 0.8 false true
-# Get only failures to learn from mistakes
-agentdb reflexion retrieve "performance optimization" 15 0.0 true false
-```
-**Output:**
-```
-🔍 Retrieving Episodes
-ℹ Query: "implement authentication"
-ℹ k: 10
-================================================================================
-Results (3)
-================================================================================
-#1: Episode 142
-  Task: implement_oauth2_authentication
-  Similarity: 0.892
-  Reward: 0.95
-  Success: Yes
-  Critique: "Used industry-standard OAuth2 flow with refresh tokens"
-#2: Episode 89
-  Task: add_jwt_tokens
-  Similarity: 0.845
-  Reward: 0.91
-  Success: Yes
-  Critique: "Implemented secure token rotation"
-...
-```
----
-### `reflexion critique-summary`
-Get aggregated critique summary from past episodes.
-**Syntax:**
-```bash
-agentdb reflexion critique-summary <task> [only-failures]
-```
-**Parameters:**
-- `task` - Task pattern (string)
-- `only-failures` - Focus on failure lessons (optional, true/false)
-**Example:**
-```bash
-# Get all lessons about authentication
-agentdb reflexion critique-summary "authentication"
-# Get failure lessons about bug fixes
-agentdb reflexion critique-summary "bug_fix" true
-```
-**Output:**
-```
-📝 Critique Summary
-ℹ Task: "authentication"
-ℹ Episodes analyzed: 25
-================================================================================
-Key Lessons
-================================================================================
-• Always use refresh tokens for long-lived sessions (15 episodes)
-• CSRF protection required for OAuth2 flows (12 episodes)
-• Never store tokens in localStorage, use httpOnly cookies (10 episodes)
-• Rate-limit authentication attempts to prevent brute force (8 episodes)
-✅ Success rate: 88.0%
-✅ Avg reward: 0.87
-```
----
-### `reflexion prune`
-Clean up old or low-value episodes.
-**Syntax:**
-```bash
-agentdb reflexion prune [max-age-days] [max-reward]
-```
-**Parameters:**
-- `max-age-days` - Remove episodes older than X days (optional, default: 90)
-- `max-reward` - Remove episodes with reward below X (optional, default: 0.3)
-**Examples:**
-```bash
-# Conservative: remove old episodes only
-agentdb reflexion prune 180
-# Aggressive: remove low-value episodes
-agentdb reflexion prune 30 0.5
-# Default: 90 days, reward < 0.3
-agentdb reflexion prune
-```
----
-## Skill Commands
-### `skill create`
-Create a reusable skill from experience.
-**Syntax:**
-```bash
-agentdb skill create <name> <description> [code]
-```
-**Parameters:**
-- `name` - Skill name (string)
-- `description` - What this skill does (string)
-- `code` - Implementation code (optional, string)
-**Example:**
-```bash
-# Create authentication skill
-agentdb skill create "jwt_authentication" \
-  "Generate and validate JWT tokens with refresh rotation" \
-  "function generateJWT(payload) { /* code */ }"
-# Create skill without code (metadata only)
-agentdb skill create "rate_limiting" \
-  "Implement token-bucket rate limiting for API endpoints"
-```
----
-### `skill search`
-Find applicable skills by semantic similarity.
-**Syntax:**
-```bash
-agentdb skill search <query> [k]
-```
-**Parameters:**
-- `query` - Search query (string)
-- `k` - Number of results (optional, default: 10)
-**Example:**
-```bash
-# Find authentication skills
-agentdb skill search "secure user login" 5
-# Find performance optimization skills
-agentdb skill search "reduce latency" 10
-```
-**Output:**
-```
-🔍 Searching Skills
-ℹ Query: "secure user login"
-ℹ k: 5
-================================================================================
-Results (5)
-================================================================================
-#1: jwt_authentication
-  Description: Generate and validate JWT tokens with refresh rotation
-  Similarity: 0.912
-  Success Rate: 95.3%
-  Uses: 47
-  Avg Reward: 0.91
-  Avg Latency: 125ms
-#2: oauth2_flow
-  Description: Complete OAuth2 authorization code flow
-  Similarity: 0.875
-  Success Rate: 88.1%
-  Uses: 32
-  Avg Reward: 0.87
-  Avg Latency: 280ms
-...
-```
----
-### `skill consolidate`
-Automatically create skills from successful episodes.
-**Syntax:**
-```bash
-agentdb skill consolidate [min-reward] [min-success-rate]
-```
-**Parameters:**
-- `min-reward` - Minimum episode reward (optional, default: 0.8)
-- `min-success-rate` - Minimum success rate for patterns (optional, default: 0.7)
-**Examples:**
-```bash
-# Conservative: high-quality skills only
-agentdb skill consolidate 0.9 0.8
-# Balanced: default thresholds
-agentdb skill consolidate
-# Aggressive: capture more patterns
-agentdb skill consolidate 0.6 0.6
-```
-**Output:**
-```
-🎓 Consolidating Skills
-ℹ Min Reward: 0.8
-ℹ Min Success Rate: 0.7
-✅ Created 7 new skills from successful episodes
-================================================================================
-#1: error_handling_pattern
-  Episodes: 15
-  Success rate: 93.3%
-  Avg reward: 0.89
-─────────────────────────────────────────────────────────────────────────────
-#2: database_transaction
-  Episodes: 12
-  Success rate: 91.7%
-  Avg reward: 0.87
-...
-```
----
-### `skill prune`
-Remove underperforming skills.
-**Syntax:**
-```bash
-agentdb skill prune [min-success-rate] [max-latency-ms]
-```
-**Parameters:**
-- `min-success-rate` - Keep skills above this rate (optional, default: 0.5)
-- `max-latency-ms` - Remove skills slower than this (optional, default: 5000)
-**Examples:**
-```bash
-# Conservative: remove obvious failures only
-agentdb skill prune 0.3 10000
-# Balanced: default thresholds
-agentdb skill prune
-# Aggressive: keep high performers only
-agentdb skill prune 0.8 500
-```
----
-## Database Commands
-### `db stats`
-Show database statistics and record counts.
-**Syntax:**
-```bash
-agentdb db stats
-```
-**Output:**
-```
-📊 Database Statistics
-================================================================================
-causal_edges: 47 records
-causal_experiments: 3 records
-causal_observations: 150 records
-certificates: 1,234 records
-provenance_lineage: 567 records
-episodes: 2,891 records
-================================================================================
-```
----
-## Environment Variables
-### `AGENTDB_PATH`
-Database file location.
-**Default:** `./agentdb.db`
-**Example:**
-```bash
-export AGENTDB_PATH="/var/data/agent-memory.db"
-agentdb causal query
-```
----
-## Complete Example Workflow
-```bash
-# 1. Create an experiment
-agentdb causal experiment create \
-  "test-tdd-quality" \
-  "use_tdd" \
-  "code_quality_score"
-# 2. Collect data (treatment group: TDD used)
-for i in {1..30}; do
-  agentdb causal experiment add-observation \
-    1 true 0.85 '{"methodology": "TDD"}'
-done
-# 3. Collect data (control group: no TDD)
-for i in {1..30}; do
-  agentdb causal experiment add-observation \
-    1 false 0.65 '{"methodology": "ad-hoc"}'
-done
-# 4. Calculate uplift
-agentdb causal experiment calculate 1
-# 5. Query all high-impact practices
-agentdb causal query "" "code_quality_score" 0.8 0.15
-# 6. Use causal recall for decision-making
-agentdb recall with-certificate \
-  "improve code quality" 10 0.5 0.4 0.1
-# 7. Discover more patterns automatically
-agentdb learner run 3 0.6 0.7
-# 8. Clean up old/weak edges
-agentdb learner prune 0.6 0.08 90
-# 9. Check database stats
-agentdb db stats
-```
----
-## Performance
-All operations are optimized for sub-100ms latency:
-| Operation | Target | Typical |
-|-----------|--------|---------|
-| Add edge | < 5ms | 2-3ms |
-| Calculate uplift | < 100ms | 60-80ms |
-| Causal query | < 20ms | 12-15ms |
-| Recall with certificate | < 100ms | 75-90ms |
-| Learner discovery | < 60s | 30-45s |
----
-## Tips & Best Practices
-### 1. Experiment Design
-- Use **minimum 30 observations** per group for statistical power
-- Record **context** for reproducibility
-- Test **one variable** at a time (isolate cause)
-### 2. Query Optimization
-- Set **tight filters** (min-confidence, min-uplift) to reduce noise
-- Use **specific queries** instead of broad searches
-- Limit results (`[limit]`) for faster responses
-### 3. Utility Weights
-- **α (similarity)**: How relevant is the episode?
-- **β (uplift)**: How much causal impact does it have?
-- **γ (latency)**: Penalty for slow retrieval
-**Recommended presets:**
-```bash
-# Research mode (maximize causal understanding)
-agentdb recall with-certificate "query" 20 0.3 0.6 0.1
-# Production mode (fast, relevant results)
-agentdb recall with-certificate "query" 10 0.8 0.1 0.1
-# Balanced mode (default)
-agentdb recall with-certificate "query" 12 0.7 0.2 0.1
-```
-### 4. Learner Scheduling
-Run nightly learner **daily** or **weekly**:
-```bash
-# Crontab: Every night at 2 AM
-0 2 * * * AGENTDB_PATH=/data/agentdb.db agentdb learner run >> /var/log/learner.log 2>&1
-# Weekly cleanup (Sundays at 3 AM)
-0 3 * * 0 AGENTDB_PATH=/data/agentdb.db agentdb learner prune
-```
----
-## Troubleshooting
-### Error: "Not initialized"
-**Solution:** Database schema not loaded. Run:
-```bash
-# Initialize schema manually
-sqlite3 agentdb.db < agentic-flow/src/agentdb/schemas/frontier-schema.sql
-```
-### Error: "Assertion failed"
-**Solution:** Insufficient data for statistical test. Add more observations:
-```bash
-# Need at least 10 per group for t-test
-agentdb causal experiment add-observation 1 true 0.5
-agentdb causal experiment add-observation 1 false 0.7
-```
-### Slow queries
-**Solution:** Optimize database:
-```bash
-sqlite3 agentdb.db "PRAGMA optimize;"
-sqlite3 agentdb.db "ANALYZE;"
-```
----
-## See Also
-- [AgentDB README](../../agentic-flow/src/agentdb/README.md) - Architecture overview
-- [Optimization Guide](../../agentic-flow/src/agentdb/OPTIMIZATION_GUIDE.md) - Performance tuning
-- [Frontier Validation](../../agentic-flow/src/agentdb/docs/FRONTIER_FEATURES_VALIDATION.md) - Test results
----
-**Need help?** Open an issue at https://github.com/ruvnet/agentic-flow/issues