agentera 3.0.0-dev.8 → 3.0.0-dev.9

package/dist/setup/doctor/opencode.js.map

@@ -1 +1 @@
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package/dist/setup/opencode.js

@@ -9,5 +9,5 @@
  * Implementations currently live in `doctor.ts` (slice-2/3 extraction); this module
  * is the canonical import surface for OpenCode-specific setup helpers.
  */
-export { opencodeConfigDir, opencodeCommandTemplate, hasManagedMarker, diagnoseOpencodeCommands, diagnoseOpencodeSkillPaths, diagnoseOpencode, } from "./doctor.js";
+export { opencodeConfigDir, hasManagedMarker, diagnoseOpencodeCommands, diagnoseOpencodeSkillPaths, diagnoseOpencode, } from "./doctor.js";
 //# sourceMappingURL=opencode.js.map

package/dist/setup/opencode.js.map

@@ -1 +1 @@
-{"version":3,"file":"opencode.js","sourceRoot":"","sources":["../../src/setup/opencode.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AACH,OAAO,EACL,iBAAiB,EACjB,uBAAuB,EACvB,gBAAgB,EAChB,wBAAwB,EACxB,0BAA0B,EAC1B,gBAAgB,GACjB,MAAM,aAAa,CAAC"}
+{"version":3,"file":"opencode.js","sourceRoot":"","sources":["../../src/setup/opencode.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AACH,OAAO,EACL,iBAAiB,EACjB,gBAAgB,EAChB,wBAAwB,EACxB,0BAA0B,EAC1B,gBAAgB,GACjB,MAAM,aAAa,CAAC"}

package/dist/setup/opencodeConstants.js

@@ -0,0 +1,2 @@
+export const OPENCODE_SKILL_NAMES = ["agentera", "status"];
+//# sourceMappingURL=opencodeConstants.js.map

package/dist/setup/opencodeConstants.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"opencodeConstants.js","sourceRoot":"","sources":["../../src/setup/opencodeConstants.ts"],"names":[],"mappings":"AAAA,MAAM,CAAC,MAAM,oBAAoB,GAAG,CAAC,UAAU,EAAE,QAAQ,CAAU,CAAC"}

package/dist/state/installRoot.js

@@ -163,16 +163,17 @@ function missingEntries(root, entries) {
 function readBundleMarker(root) {
     const marker = path.join(root, BUNDLE_MARKER);
     if (!isFile(marker)) {
-        return null;
+        return { kind: "absent" };
     }
     try {
         const data = JSON.parse(fs.readFileSync(marker, "utf8"));
-        return data && typeof data === "object" && !Array.isArray(data)
-            ? data
-            : null;
+        if (data && typeof data === "object" && !Array.isArray(data)) {
+            return { kind: "valid", data: data };
+        }
+        return { kind: "corrupt" };
     }
     catch {
-        return null;
+        return { kind: "corrupt" };
     }
 }
 const SEMVER_PREFIX = /^\d+\.\d+\.\d+/;
@@ -228,7 +229,8 @@ export function classifyResolvedRoot(rootInput, opts) {
     const hasSetupEvidence = setupMissing.length === 0;
     const hasBundleEvidence = bundleMissing.length === 0;
     const presentEvidence = MANAGED_EVIDENCE.filter((entry) => pathExists(path.join(root, entry)));
-    const marker = readBundleMarker(root);
+    const markerRead = readBundleMarker(root);
+    const marker = markerRead.kind === "valid" ? markerRead.data : null;
     let current = marker?.version ?? null;
     // Fall back to pyproject.toml when the marker version is not a valid semver
     // (e.g. stale "v1" or placeholder "current" from v2-era installs).
@@ -242,6 +244,13 @@ export function classifyResolvedRoot(rootInput, opts) {
         return managedFresh(root, source, setupMissing, bundleMissing, expected, current);
     }
     if (hasBundleEvidence) {
+        if (markerRead.kind === "corrupt") {
+            return managedStale(root, source, expected, current, ["a valid bundle marker file"], "corrupt_marker", {
+                expectedVersion: expected,
+                currentVersion: current,
+                markerPath: path.join(root, BUNDLE_MARKER),
+            });
+        }
         if (expected !== null && current !== expected) {
             return managedStale(root, source, expected, current, ["current bundle marker/version or required CLI command evidence"], "version_mismatch", {
                 expectedVersion: expected,

package/dist/state/installRoot.js.map

@@ -1 +1 @@
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package/dist/upgrade/appContentRefresh.js

@@ -280,7 +280,19 @@ export function planAppContentRefreshItems(ctx) {
     const resolvedSourceRoot = resolvePath(sourceRoot);
     const installedRoot = installedRootForDetection(appHome);
     if (!installedRoot) {
-        return [];
+        if (!pathExists(appHome)) {
+            return [];
+        }
+        return [
+            {
+                status: "pending",
+                action: APP_CONTENT_REFRESH_ACTION,
+                runtime: "installed-app",
+                source: resolvedSourceRoot,
+                target: refreshAppContentTargetRoot(appHome),
+                message: "install root has user data only; will install v3 app content (skills, references, registry, dist/capabilities)",
+            },
+        ];
     }
     const staleSurfaces = detectStaleAppContentSurfaces(appHome, resolvedSourceRoot);
     const hookItems = planInstalledHooksRetirementItems(ctx);

package/dist/upgrade/appContentRefresh.js.map

@@ -1 +1 @@
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package/dist/upgrade/atomicWriter.js

@@ -0,0 +1,23 @@
+import fs from "node:fs";
+export function writeFileAtomic(target, data, encoding = "utf8") {
+    const tmp = `${target}.tmp.${process.pid}`;
+    try {
+        if (Buffer.isBuffer(data)) {
+            fs.writeFileSync(tmp, data);
+        }
+        else {
+            fs.writeFileSync(tmp, data, encoding);
+        }
+        fs.renameSync(tmp, target);
+    }
+    catch (err) {
+        try {
+            fs.unlinkSync(tmp);
+        }
+        catch {
+            // tmp may not exist or was already removed
+        }
+        throw err;
+    }
+}
+//# sourceMappingURL=atomicWriter.js.map

package/dist/upgrade/atomicWriter.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"atomicWriter.js","sourceRoot":"","sources":["../../src/upgrade/atomicWriter.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,SAAS,CAAC;AAEzB,MAAM,UAAU,eAAe,CAC7B,MAAc,EACd,IAAqB,EACrB,WAA2B,MAAM;IAEjC,MAAM,GAAG,GAAG,GAAG,MAAM,QAAQ,OAAO,CAAC,GAAG,EAAE,CAAC;IAC3C,IAAI,CAAC;QACH,IAAI,MAAM,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE,CAAC;YAC1B,EAAE,CAAC,aAAa,CAAC,GAAG,EAAE,IAAI,CAAC,CAAC;QAC9B,CAAC;aAAM,CAAC;YACN,EAAE,CAAC,aAAa,CAAC,GAAG,EAAE,IAAI,EAAE,QAAQ,CAAC,CAAC;QACxC,CAAC;QACD,EAAE,CAAC,UAAU,CAAC,GAAG,EAAE,MAAM,CAAC,CAAC;IAC7B,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,IAAI,CAAC;YACH,EAAE,CAAC,UAAU,CAAC,GAAG,CAAC,CAAC;QACrB,CAAC;QAAC,MAAM,CAAC;YACP,2CAA2C;QAC7C,CAAC;QACD,MAAM,GAAG,CAAC;IACZ,CAAC;AACH,CAAC"}

package/dist/upgrade/coexistenceProbe.js

@@ -102,6 +102,4 @@ export function prependCoexistenceDoctorSection(text, sectionLines) {
     }
     return `${sectionLines.join("\n")}\n\n${text}`;
 }
-/** Reset nothing today; reserved for future contract caching in tests. */
-export function resetCoexistenceProbeCache() { }
 //# sourceMappingURL=coexistenceProbe.js.map

package/dist/upgrade/coexistenceProbe.js.map

@@ -1 +1 @@
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+{"version":3,"file":"coexistenceProbe.js","sourceRoot":"","sources":["../../src/upgrade/coexistenceProbe.ts"],"names":[],"mappings":"AAAA,OAAO,IAAI,MAAM,WAAW,CAAC;AAE7B,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,WAAW,EAAE,MAAM,kBAAkB,CAAC;AACnE,OAAO,EAAE,mBAAmB,EAAE,MAAM,iBAAiB,CAAC;AACtD,OAAO,EAAE,mBAAmB,EAAE,MAAM,uBAAuB,CAAC;AAC5D,OAAO,EAAE,aAAa,EAAE,cAAc,EAAE,MAAM,yBAAyB,CAAC;AACxE,OAAO,EAAE,qBAAqB,EAAE,MAAM,qBAAqB,CAAC;AAG5D;;GAEG;AAEH,MAAM,CAAC,MAAM,2BAA2B,GAAG,uCAAuC,CAAC;AACnF,MAAM,CAAC,MAAM,0BAA0B,GAAG,aAAa,CAAC;AACxD,MAAM,CAAC,MAAM,mCAAmC,GAAG,mBAAmB,CAAC;AAIvE,SAAS,aAAa,CAAC,UAAkB;IACvC,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,2BAA2B,CAAC,CAAC;IACrE,IAAI,UAAU,CAAC,SAAS,CAAC,EAAE,CAAC;QAC1B,OAAO,SAAS,CAAC;IACnB,CAAC;IACD,OAAO,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,2BAA2B,CAAC,CAAC;AAC/D,CAAC;AAED,MAAM,UAAU,6BAA6B,CAAC,UAAkB;IAC9D,OAAO,mBAAmB,CAAC,aAAa,CAAC,UAAU,CAAC,CAAe,CAAC,CAAC,+BAA+B;AACtG,CAAC;AAED,iFAAiF;AACjF,MAAM,UAAU,2BAA2B,CAAC,OAAe;IACzD,IAAI,CAAC,UAAU,CAAC,OAAO,CAAC,EAAE,CAAC;QACzB,OAAO,KAAK,CAAC;IACf,CAAC;IACD,MAAM,gBAAgB,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,KAAK,CAAC,CAAC;IACnD,IAAI,CAAC,UAAU,CAAC,gBAAgB,CAAC,EAAE,CAAC;QAClC,OAAO,KAAK,CAAC;IACf,CAAC;IACD,IAAI,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,gBAAgB,EAAE,mBAAmB,CAAC,CAAC,EAAE,CAAC;QAC7D,OAAO,KAAK,CAAC;IACf,CAAC;IACD,MAAM,YAAY,GAAG,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,gBAAgB,EAAE,aAAa,CAAC,CAAC,CAAC;IACxE,MAAM,cAAc,GAAG,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,gBAAgB,EAAE,SAAS,EAAE,UAAU,CAAC,CAAC,CAAC;IAClF,OAAO,CAAC,YAAY,IAAI,cAAc,CAAC,IAAI,qBAAqB,CAAC,gBAAgB,CAAC,CAAC;AACrF,CAAC;AAED,MAAM,UAAU,mBAAmB,CAAC,IAAiC;IACnE,MAAM,GAAG,GAAG,IAAI,CAAC,GAAG,IAAI,OAAO,CAAC,GAAG,CAAC;IACpC,MAAM,OAAO,GAAG,WAAW,CAAC,cAAc,CAAC,GAAG,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC;IAC5D,IAAI,CAAC,2BAA2B,CAAC,OAAO,CAAC,EAAE,CAAC;QAC1C,OAAO,EAAE,CAAC;IACZ,CAAC;IACD,OAAO,CAAC,wBAAwB,OAAO,EAAE,CAAC,CAAC;AAC7C,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,2BAA2B,CAAC,GAAY;IACtD,IAAI,CAAC,GAAG,IAAI,OAAO,GAAG,KAAK,QAAQ,IAAI,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC;QAC1D,OAAO,IAAI,CAAC;IACd,CAAC;IACD,MAAM,KAAK,GAAG,GAAiB,CAAC;IAChC,MAAM,EAAE,GAAG,KAAK,CAAC,YAAY,CAAC;IAC9B,MAAM,EAAE,GAAG,KAAK,CAAC,SAAS,CAAC;IAC3B,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,IAAI,EAAE,CAAC,MAAM,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,IAAI,EAAE,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACnF,OAAO,IAAI,CAAC;IACd,CAAC;IACD,OAAO;QACL,KAAK,mCAAmC,GAAG;QAC3C,WAAW,EAAE,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE;QACtC,WAAW,EAAE,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE;KACvC,CAAC;AACJ,CAAC;AAED,MAAM,UAAU,4BAA4B,CAAC,QAAoB;IAC/D,MAAM,OAAO,GAAG,MAAM,CAAC,QAAQ,CAAC,cAAc,IAAI,0BAA0B,CAAC,CAAC;IAC9E,MAAM,OAAO,GAAG,QAAQ,CAAC,OAAO,CAAC;IACjC,IAAI,CAAC,OAAO,IAAI,OAAO,OAAO,KAAK,QAAQ,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE,CAAC;QACtE,MAAM,IAAI,KAAK,CAAC,uDAAuD,CAAC,CAAC;IAC3E,CAAC;IACD,MAAM,KAAK,GAAG,OAAqB,CAAC;IACpC,MAAM,QAAQ,GAAG,MAAM,CAAC,KAAK,CAAC,QAAQ,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,CAAC;IACrD,MAAM,WAAW,GAAG,KAAK,CAAC,WAAW,CAAC;IACtC,IAAI,CAAC,QAAQ,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,WAAW,CAAC,IAAI,WAAW,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzE,MAAM,IAAI,KAAK,CAAC,uEAAuE,CAAC,CAAC;IAC3F,CAAC;IACD,MAAM,KAAK,GAAG,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;IAClC,KAAK,MAAM,IAAI,IAAI,WAAW,EAAE,CAAC;QAC/B,KAAK,CAAC,IAAI,CAAC,OAAO,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACpC,CAAC;IACD,MAAM,UAAU,GAAG,2BAA2B,CAAC,QAAQ,CAAC,iBAAiB,CAAC,CAAC;IAC3E,IAAI,UAAU,EAAE,CAAC;QACf,KAAK,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,CAAC;IAC5B,CAAC;IACD,OAAO,KAAK,CAAC;AACf,CAAC;AAED,MAAM,UAAU,6BAA6B,CAAC,IAI7C;IACC,MAAM,QAAQ,GAAG,mBAAmB,CAAC,EAAE,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,GAAG,EAAE,IAAI,CAAC,GAAG,EAAE,CAAC,CAAC;IACzE,IAAI,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAC1B,OAAO,IAAI,CAAC;IACd,CAAC;IACD,MAAM,QAAQ,GAAG,6BAA6B,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;IAChE,OAAO,4BAA4B,CAAC,QAAQ,CAAC,CAAC;AAChD,CAAC;AAED,MAAM,UAAU,+BAA+B,CAAC,IAAY,EAAE,YAA6B;IACzF,IAAI,CAAC,YAAY,IAAI,YAAY,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAC/C,OAAO,IAAI,CAAC;IACd,CAAC;IACD,OAAO,GAAG,YAAY,CAAC,IAAI,CAAC,IAAI,CAAC,OAAO,IAAI,EAAE,CAAC;AACjD,CAAC"}

package/dist/upgrade/compatibility.js

@@ -36,7 +36,7 @@ const CROSS_MAJOR_ITEMS = [
     { phase: "runtime", verb: "migrate", name: "v2_to_v3_runtime_rewire" },
     { phase: "cleanup", verb: "migrate", name: "v2_to_v3_app_home_cleanup" },
 ];
-function isSourceCheckoutRoot(sourceRoot) {
+export function isSourceCheckoutRoot(sourceRoot) {
     return (pathExists(path.join(sourceRoot, ".git")) &&
         isFile(path.join(sourceRoot, "skills", "agentera", "SKILL.md")) &&
         isFile(path.join(sourceRoot, "registry.json")) &&
@@ -151,17 +151,6 @@ function groupItemsByPhase(items) {
     }
     return phases;
 }
-export function collectV3MigrationOperations(preview) {
-    const out = [];
-    for (const phase of preview.phases) {
-        for (const item of phase.items) {
-            if (item.verb === "migrate" && item.tag === MAJOR_BOUNDARY_ITEM_TAG) {
-                out.push(item);
-            }
-        }
-    }
-    return out;
-}
 export function previewCrossMajorGuard(args) {
     const channel = resolveUpdateChannel(args);
     const install = classifyInstall({ appHome: args.appHome, sourceRoot: args.sourceRoot });

package/dist/upgrade/compatibility.js.map

@@ -1 +1 @@
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+{"version":3,"file":"compatibility.js","sourceRoot":"","sources":["../../src/upgrade/compatibility.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,SAAS,CAAC;AACzB,OAAO,IAAI,MAAM,WAAW,CAAC;AAE7B,OAAO,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AACtD,OAAO,EAAE,mBAAmB,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAC7E,OAAO,EAAE,aAAa,EAAE,MAAM,yBAAyB,CAAC;AACxD,OAAO,EAAE,WAAW,EAAE,gBAAgB,EAAE,MAAM,eAAe,CAAC;AAC9D,OAAO,EAAE,oBAAoB,EAA6D,MAAM,eAAe,CAAC;AAChH,OAAO,EACL,sBAAsB,EACtB,gCAAgC,GAEjC,MAAM,wBAAwB,CAAC;AAChC,OAAO,EAAE,qBAAqB,EAAE,MAAM,qBAAqB,CAAC;AAE5D,OAAO,EAAE,gCAAgC,EAAE,MAAM,wBAAwB,CAAC;AAE1E;;;GAGG;AAEH,MAAM,CAAC,MAAM,uBAAuB,GAAG,gCAAgC,CAAC;AACxE,MAAM,CAAC,MAAM,2BAA2B,GAAG,sBAAsB,CAAC;AAClE,MAAM,CAAC,MAAM,wBAAwB,GAAG,mBAAmB,CAAC;AAC5D,MAAM,CAAC,MAAM,qBAAqB,GAAG,gBAAgB,CAAC;AACtD,MAAM,CAAC,MAAM,cAAc,GAAG,SAAS,CAAC;AACxC,MAAM,CAAC,MAAM,sBAAsB,GAAG,qBAAqB,CAAC;AAC5D,MAAM,CAAC,MAAM,6BAA6B,GAAG,yBAAyB,CAAC;AAUvE,MAAM,UAAU,mBAAmB,CAAC,IAAiB;IACnD,QAAQ,IAAI,EAAE,CAAC;QACb,KAAK,qBAAqB;YACxB,OAAO,IAAI,CAAC;QACd,KAAK,uBAAuB;YAC1B,OAAO,IAAI,CAAC;QACd,KAAK,iBAAiB;YACpB,OAAO,QAAQ,CAAC;QAClB,KAAK,iBAAiB;YACpB,OAAO,SAAS,CAAC;IACrB,CAAC;AACH,CAAC;AA4DD,MAAM,iBAAiB,GAAyF;IAC9G,EAAE,KAAK,EAAE,WAAW,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,oBAAoB,EAAE;IACnE,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,yBAAyB,EAAE;IACtE,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,SAAS,EAAE,IAAI,EAAE,2BAA2B,EAAE;CACzE,CAAC;AAEF,MAAM,UAAU,oBAAoB,CAAC,UAAkB;IACrD,OAAO,CACL,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,MAAM,CAAC,CAAC;QACzC,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,QAAQ,EAAE,UAAU,EAAE,UAAU,CAAC,CAAC;QAC/D,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,eAAe,CAAC,CAAC;QAC9C,CAAC,eAAe,CAAC,UAAU,CAAC,CAC7B,CAAC;AACJ,CAAC;AAED,SAAS,WAAW,CAAC,OAAe,EAAE,UAAkB,EAAE,gBAAwB;IAChF,OAAO;QACL,wBAAwB,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,gBAAgB,EAAE,aAAa,CAAC,CAAC;QAC5E,0BAA0B,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,gBAAgB,EAAE,SAAS,EAAE,UAAU,CAAC,CAAC;QACtF,iBAAiB,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,gBAAgB,EAAE,QAAQ,EAAE,UAAU,EAAE,UAAU,CAAC,CAAC;QACxF,6BAA6B,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,mBAAmB,CAAC,CAAC;QACjF,6BAA6B,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,gBAAgB,EAAE,mBAAmB,CAAC,CAAC;QACvF,eAAe,EAAE,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,MAAM,CAAC,CAAC;QAC1D,iBAAiB,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,QAAQ,EAAE,UAAU,EAAE,UAAU,CAAC,CAAC;QAClF,oBAAoB,EAAE,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,eAAe,CAAC,CAAC;KACrE,CAAC;AACJ,CAAC;AAED,SAAS,oBAAoB,CAAC,OAAuB,EAAE,gBAAwB;IAC7E,OAAO,CACL,CAAC,OAAO,CAAC,wBAAwB,IAAI,OAAO,CAAC,0BAA0B,CAAC;QACxE,qBAAqB,CAAC,gBAAgB,CAAC;QACvC,CAAC,OAAO,CAAC,6BAA6B,CACvC,CAAC;AACJ,CAAC;AAED,MAAM,UAAU,oBAAoB,CAAC,UAAkB;IACrD,IAAI,oBAAoB,CAAC,UAAU,CAAC,EAAE,CAAC;QACrC,OAAO,CAAC,CAAC;IACX,CAAC;IACD,IAAI,eAAe,CAAC,UAAU,CAAC,EAAE,CAAC;QAChC,OAAO,CAAC,CAAC;IACX,CAAC;IACD,MAAM,OAAO,GAAG,gBAAgB,CAAC,UAAU,CAAC,CAAC;IAC7C,IAAI,OAAO,EAAE,CAAC;QACZ,MAAM,KAAK,GAAG,MAAM,CAAC,QAAQ,CAAC,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,EAAE,EAAE,CAAC,CAAC;QAC/D,IAAI,MAAM,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,KAAK,GAAG,CAAC,EAAE,CAAC;YACxC,OAAO,KAAK,CAAC;QACf,CAAC;IACH,CAAC;IACD,OAAO,CAAC,CAAC;AACX,CAAC;AAED,MAAM,UAAU,eAAe,CAAC,IAAyB;IACvD,MAAM,OAAO,GAAG,IAAI,CAAC,OAAO,CAAC;IAC7B,MAAM,UAAU,GAAG,IAAI,CAAC,UAAU,CAAC;IACnC,MAAM,KAAK,GAAG,WAAW,CAAC,OAAO,CAAC,CAAC;IACnC,MAAM,gBAAgB,GAAG,KAAK,CAAC,gBAAgB,CAAC;IAChD,MAAM,OAAO,GAAG,WAAW,CAAC,OAAO,EAAE,UAAU,EAAE,gBAAgB,CAAC,CAAC;IAEnE,IAAI,eAAe,CAAC,UAAU,CAAC,IAAI,eAAe,CAAC,gBAAgB,CAAC,IAAI,eAAe,CAAC,OAAO,CAAC,EAAE,CAAC;QACjG,OAAO;YACL,IAAI,EAAE,uBAAuB;YAC7B,OAAO;YACP,gBAAgB;YAChB,cAAc,EAAE,KAAK,CAAC,cAAc;YACpC,UAAU;YACV,OAAO;SACR,CAAC;IACJ,CAAC;IAED,IAAI,oBAAoB,CAAC,OAAO,EAAE,gBAAgB,CAAC,EAAE,CAAC;QACpD,OAAO;YACL,IAAI,EAAE,qBAAqB;YAC3B,OAAO;YACP,gBAAgB;YAChB,cAAc,EAAE,KAAK,CAAC,cAAc;YACpC,UAAU;YACV,OAAO;SACR,CAAC;IACJ,CAAC;IAED,IAAI,oBAAoB,CAAC,UAAU,CAAC,EAAE,CAAC;QACrC,OAAO;YACL,IAAI,EAAE,iBAAiB;YACvB,OAAO;YACP,gBAAgB;YAChB,cAAc,EAAE,KAAK,CAAC,cAAc;YACpC,UAAU;YACV,OAAO;SACR,CAAC;IACJ,CAAC;IAED,OAAO;QACL,IAAI,EAAE,iBAAiB;QACvB,OAAO;QACP,gBAAgB;QAChB,cAAc,EAAE,KAAK,CAAC,cAAc;QACpC,UAAU;QACV,OAAO;KACR,CAAC;AACJ,CAAC;AAED,MAAM,UAAU,yBAAyB,CAAC,OAA8B,EAAE,UAAkB;IAC1F,OAAO,OAAO,CAAC,IAAI,KAAK,qBAAqB,IAAI,oBAAoB,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;AACzF,CAAC;AAED,SAAS,qBAAqB;IAC5B,OAAO,iBAAiB,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC;QACtC,GAAG,IAAI;QACP,aAAa,EAAE,6BAA6B;QAC5C,GAAG,EAAE,uBAAuB;QAC5B,eAAe,EAAE,2BAA2B;KAC7C,CAAC,CAAC,CAAC;AACN,CAAC;AAED,SAAS,iBAAiB,CAAC,KAA2B;IACpD,MAAM,KAAK,GAAG,CAAC,QAAQ,EAAE,WAAW,EAAE,SAAS,EAAE,SAAS,CAAU,CAAC;IACrE,MAAM,OAAO,GAAG,IAAI,GAAG,EAAgC,CAAC;IACxD,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE,CAAC;QACzB,MAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC;QAC3C,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QAChB,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,EAAE,IAAI,CAAC,CAAC;IAChC,CAAC;IACD,MAAM,MAAM,GAA0B,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,KAAK,EAAE,EAAE,EAAE,CAAC,CAAC;IACtE,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE,CAAC;QACzB,IAAI,IAAI,KAAK,QAAQ,EAAE,CAAC;YACtB,SAAS;QACX,CAAC;QACD,MAAM,UAAU,GAAG,OAAO,CAAC,GAAG,CAA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package/dist/upgrade/doctor.js

@@ -5,7 +5,7 @@ import { SOURCE_LABELS, classifyResolvedRoot } from "../state/installRoot.js";
 import { doctorRoots, loadSuiteVersion } from "./appModel.js";
 import { isNpxBundleRoot } from "../core/sourceRoot.js";
 import { resolveInvokedUpdateChannel } from "./channels.js";
-import { classifyInstall, cliDistributionMajor, crossMajorBoundaryApplies, projectInstallTrack, } from "./compatibility.js";
+import { classifyInstall, cliDistributionMajor, crossMajorBoundaryApplies, isSourceCheckoutRoot, projectInstallTrack, } from "./compatibility.js";
 import { isStableSuccessorAnnounced } from "./nextMajorDoctor.js";
 import { buildUpgradeCommands, commandText } from "./upgradeCommands.js";
 import { parseSemverMajor } from "./versionResolution.js";
@@ -42,9 +42,6 @@ function buildInvokingCliRetryCommand(sourceRoot, channel, env, expectedCommand)
     const packageSpec = channel.channel === "development" ? "agentera@next" : "agentera@latest";
     return commandText(["npx", "-y", packageSpec, expectedCommand]);
 }
-function crossMajorPendingApprovalPhrase() {
-    return "no upgrade offered: v3 successor line is not announced yet";
-}
 /**
  * Doctor status build. Faithful TS port of build_doctor_status /
  * public_doctor_status from scripts/agentera_upgrade.py.
@@ -69,12 +66,6 @@ export function appLifecycleActionNoun(status) {
     }
     return "repair";
 }
-export function appLifecycleApprovalPhrase(status, installRoot) {
-    if (status === APP_UP_TO_DATE) {
-        return "no action needed: Agentera app files are up to date";
-    }
-    return `approve app files ${appLifecycleActionNoun(status)} for ${installRoot}`;
-}
 export const BUNDLE_MARKER = ".agentera-bundle.json";
 /** Agentera user state preserved during v2→v3 managed app-home cleanup. */
 export const AGENTERA_USER_STATE_NAMES = new Set([
@@ -91,6 +82,7 @@ export const ROOT_USER_STATE_FILE_NAMES = new Set([
     "TODO.md",
     "CHANGELOG.md",
     "DESIGN.md",
+    "v3-handoff.json",
 ]);
 export const ROOT_USER_STATE_DIR_NAMES = new Set([
     "history",
@@ -192,8 +184,6 @@ export function buildDoctorStatus(installRoot, opts) {
             sourceRoot,
             installRoot: sourceRoot,
             installRootSource: "bundled app",
-            home,
-            project,
             rootStatus: "bundled",
             installKind: "v3_self_contained_npm",
             markerVersion: bundleExpected,
@@ -201,7 +191,37 @@ export function buildDoctorStatus(installRoot, opts) {
             dryRunCommand: null,
             applyCommand: null,
             retryCommand: commandText(["npx", "-y", "agentera", expectedCommands[0] ?? "prime"]),
-            approval: "no action needed: self-contained app bundle is current",
+        };
+    }
+    // Source checkout: the CLI invocation IS the app, so the install root is
+    // user state only and never needs upgrade gating. Narrowed to the default
+    // app home AND an existing install root so an explicit --install-root, a
+    // missing default app home (still a real diagnostic), and AGENTERA_HOME
+    // overrides all keep their existing inspection behavior.
+    if (isSourceCheckoutRoot(sourceRoot) && rootSource === SOURCE_LABELS.default && pathExists(installRoot)) {
+        const checkoutExpected = opts.expectedVersion || loadSuiteVersion(sourceRoot) || "unknown";
+        return {
+            schemaVersion: "agentera.bundleStatus.v1",
+            status: APP_UP_TO_DATE,
+            expectedVersion: checkoutExpected,
+            appHome: installRoot,
+            appHomeSource: rootSource,
+            managedAppRoot: installRoot,
+            userDataRoot: installRoot,
+            activeAppRoot: installRoot,
+            authoritativeRoot: installRoot,
+            skillRoot: path.join(sourceRoot, "skills", "agentera"),
+            runtimeRoot: sourceRoot,
+            sourceRoot,
+            installRoot,
+            installRootSource: rootSource,
+            rootStatus: "source",
+            installKind: "source_checkout",
+            markerVersion: null,
+            signals: [],
+            dryRunCommand: null,
+            applyCommand: null,
+            retryCommand: null,
         };
     }
     const expected = opts.expectedVersion || loadSuiteVersion(sourceRoot) || "unknown";
@@ -297,8 +317,6 @@ export function buildDoctorStatus(installRoot, opts) {
         sourceRoot,
         installRoot,
         installRootSource: rootSource,
-        home,
-        project,
         rootStatus,
         installKind: install.kind,
         markerVersion,
@@ -313,9 +331,6 @@ export function buildDoctorStatus(installRoot, opts) {
         crossMajorBoundaryDetected: crossMajorDetected,
         crossMajorBoundary,
         retryCommand: buildInvokingCliRetryCommand(sourceRoot, channel, env, expectedCommands[0] ?? "prime"),
-        approval: crossMajorPending
-            ? crossMajorPendingApprovalPhrase()
-            : appLifecycleApprovalPhrase(status, installRoot),
     };
 }
 export function publicDoctorStatus(status) {

package/dist/upgrade/doctor.js.map

@@ -1 +1 @@
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package/dist/upgrade/doctorClassifier.js

@@ -129,6 +129,17 @@ function appendManagedStaleSignals(ctx, signals) {
             message: "Agentera app files need repair",
         });
     }
+    else if (reason === "corrupt_marker") {
+        if (ctx.recoverableStaleDefault) {
+            signals.push(recoverableStaleDefaultSignal(ctx.installRoot, ctx.roots));
+        }
+        const markerPath = String(ctx.classification.diagnostic.evidence.markerPath);
+        signals.push({
+            status: APP_REPAIR_NEEDED,
+            kind: "corrupt_bundle_marker",
+            message: `bundle marker file is corrupt: ${markerPath}`,
+        });
+    }
     else if (reason === "version_mismatch") {
         if (ctx.recoverableStaleDefault) {
             signals.push(recoverableStaleDefaultSignal(ctx.installRoot, ctx.roots));

package/dist/upgrade/doctorClassifier.js.map

@@ -1 +1 @@
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