agentera 3.0.0-dev.6 → 3.0.0-dev.7

package/dist/hooks/compaction/apply.js

@@ -5,6 +5,10 @@
  * writes the compacted result back to disk. `compactYamlFile` is for
  * the three YAML artifacts (progress, decisions, health);
  * `compactFile` handles both YAML and markdown (TODO resolved).
+ *
+ * Note: `entry.header`/`entry.body` reads are typed `as string` because the
+ * entries originate from parsed markdown artifact text (an IO boundary); at
+ * runtime these fields are always strings.
  */
 import fs from "node:fs";
 import YAML from "yaml";
@@ -12,7 +16,7 @@ import { loadYamlMapping } from "../../core/yaml.js";
 import { MAX_FULL_ENTRIES, MAX_ONELINE_ENTRIES, MAX_TOTAL_ENTRIES, applyRetentionCaps } from "../common.js";
 import { COMPACTABLE_YAML_ARTIFACTS, SPECS, YAML_SPEC_BY_ARTIFACT, formatTodoOneline } from "./dryRun.js";
 import { applyRetentionCaps as _applyRetentionCaps, overLimitCount, selectDecisionActiveEntries, selectDecisionArchiveEntries, stableSortBy, yamlArchiveEntries, yamlArchiveEntry, yamlEntryNumber, yamlRecentFullAndOlder, yamlSortEntries, } from "./retention.js";
-import { parseEntries, parseTodoResolved, extractResolvedSection } from "./parse.js";
+import { normalizeTodoResolvedLayout, parseEntries, parseTodoResolved, extractResolvedSection } from "./parse.js";
 export function compactYamlFile(p, artifact) {
     if (!(artifact in COMPACTABLE_YAML_ARTIFACTS)) {
         throw new Error(`unsupported YAML artifact: ${artifact}`);
@@ -126,6 +130,8 @@ function compactTodoEntries(entries) {
     return result;
 }
 function formatProgressLike(headerPrefix, entries, spec) {
+    // `entry.header`/`entry.body` below come from parsed markdown artifact text; the
+    // `as string` casts sit at that markdown-parse IO boundary (runtime values are strings).
     const lines = [];
     if (headerPrefix.trim()) {
         lines.push(headerPrefix.replace(/\s+$/, ""));
@@ -173,16 +179,28 @@ function extractHeaderPrefix(text, spec) {
 }
 function compactTodoResolved(p) {
     const spec = SPECS["todo-resolved"];
-    const text = fs.readFileSync(p, "utf8");
-    const [start, end, body] = extractResolvedSection(text);
+    let text = fs.readFileSync(p, "utf8");
+    const normalized = normalizeTodoResolvedLayout(text);
+    if (normalized.changed) {
+        fs.writeFileSync(p, normalized.text);
+        text = normalized.text;
+    }
+    const [start, end] = extractResolvedSection(text);
     if (start < 0)
-        return { full_before: 0, oneline_before: 0, full_after: 0, oneline_after: 0, dropped: 0, changed: false };
+        return { full_before: 0, oneline_before: 0, full_after: 0, oneline_after: 0, dropped: 0, changed: normalized.changed };
     const entries = parseTodoResolved(text, spec);
     const fullBefore = entries.filter((e) => e.kind === "full").length;
     const onelineBefore = entries.filter((e) => e.kind === "oneline").length;
     const totalBefore = entries.length;
     if (totalBefore <= MAX_TOTAL_ENTRIES && fullBefore <= MAX_FULL_ENTRIES && onelineBefore <= MAX_ONELINE_ENTRIES) {
-        return { full_before: fullBefore, oneline_before: onelineBefore, full_after: fullBefore, oneline_after: onelineBefore, dropped: 0, changed: false };
+        return {
+            full_before: fullBefore,
+            oneline_before: onelineBefore,
+            full_after: fullBefore,
+            oneline_after: onelineBefore,
+            dropped: 0,
+            changed: normalized.changed,
+        };
     }
     const compacted = compactTodoEntries(entries);
     const fullAfter = compacted.filter((e) => e.kind === "full").length;
@@ -203,7 +221,14 @@ function compactTodoResolved(p) {
     const headingEnd = text.indexOf("\n", start) + 1;
     const newText = text.slice(0, headingEnd) + "\n" + newBody + text.slice(end);
     fs.writeFileSync(p, newText);
-    return { full_before: fullBefore, oneline_before: onelineBefore, full_after: fullAfter, oneline_after: onelineAfter, dropped, changed: true };
+    return {
+        full_before: fullBefore,
+        oneline_before: onelineBefore,
+        full_after: fullAfter,
+        oneline_after: onelineAfter,
+        dropped,
+        changed: normalized.changed || true,
+    };
 }
 export function compactFile(p, specName) {
     if (!(specName in SPECS))

package/dist/hooks/compaction/apply.js.map

@@ -1 +1 @@
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package/dist/hooks/compaction/dryRun.js

@@ -46,6 +46,8 @@ export function parseHeader(header) {
     return [number, date, title];
 }
 // --- one-line formatters ---------------------------------------------------
+// `entry.header`/`entry.body` below come from parsed markdown artifact text; the
+// `as string` casts sit at that markdown-parse IO boundary (runtime values are strings).
 function formatProgressOneline(entry) {
     let [number, date, title] = parseHeader(entry.header);
     if (!title) {
@@ -102,7 +104,7 @@ function formatExperimentOneline(entry) {
 const TODO_CHECKBOX_RE = /^-\s*\[x\]\s*/;
 const TODO_ISS_LABEL_RE = /ISS-\d+:?\s*/;
 function isTodoOnelinePassthrough(entry) {
-    return entry.kind === "oneline" && String(entry.header).includes("~~");
+    return entry.kind === "oneline";
 }
 function stripTodoMetadata(header) {
     let stripped = header.replace(TODO_CHECKBOX_RE, "");
@@ -117,7 +119,7 @@ export function formatTodoOneline(entry) {
         return header.startsWith("- ") ? header : `- ${header}`;
     }
     const summary = truncateWords(stripTodoMetadata(header) || "(resolved)", 15);
-    return `- [x] ~~${summary}~~`;
+    return `- [x] ${summary}`;
 }
 export const SPECS = {
     progress: {
@@ -158,7 +160,7 @@ export const SPECS = {
         onelineHeadingRe: null,
         archiveHeading: null,
         formatOneline: formatTodoOneline,
-        scopedSection: "## Resolved",
+        scopedSection: "## ✓ Resolved",
     },
 };
 export const COMPACTABLE_YAML_ARTIFACTS = {

package/dist/hooks/compaction/dryRun.js.map

@@ -1 +1 @@
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package/dist/hooks/compaction/index.js

@@ -15,9 +15,9 @@
 import { applyRetentionCaps as _applyRetentionCaps } from "../common.js";
 import { compactFile, compactYamlFile, detectOverflow, compactEntries } from "./apply.js";
 import { checkCompaction, computeCompactionStatus, fixCompaction, runCompaction } from "./status.js";
-import { parseEntries, parseFullEntries, parseOnelineEntries, splitArchive, extractResolvedSection, parseTodoResolved } from "./parse.js";
+import { parseEntries, parseFullEntries, parseOnelineEntries, splitArchive, extractResolvedSection, parseTodoResolved, countTodoResolvedEntries, normalizeTodoResolvedLayout, } from "./parse.js";
 import { SPECS, COMPACTABLE_YAML_ARTIFACTS, NON_COMPACTABLE_ARTIFACTS, YAML_SPEC_BY_ARTIFACT, formatTodoOneline } from "./dryRun.js";
 import { overLimitCount, stableSortBy, yamlArchiveEntry, yamlArchiveEntries, yamlRecentFullAndOlder, yamlSortEntries, decisionProtectedOverflowCount, selectDecisionActiveEntries, selectDecisionArchiveEntries, } from "./retention.js";
-export { compactFile, compactYamlFile, detectOverflow, compactEntries, checkCompaction, computeCompactionStatus, fixCompaction, runCompaction, parseEntries, parseFullEntries, parseOnelineEntries, splitArchive, extractResolvedSection, parseTodoResolved, SPECS, COMPACTABLE_YAML_ARTIFACTS, NON_COMPACTABLE_ARTIFACTS, YAML_SPEC_BY_ARTIFACT, formatTodoOneline, overLimitCount, stableSortBy, yamlArchiveEntry, yamlArchiveEntries, yamlRecentFullAndOlder, yamlSortEntries, decisionProtectedOverflowCount, selectDecisionActiveEntries, selectDecisionArchiveEntries, };
+export { compactFile, compactYamlFile, detectOverflow, compactEntries, checkCompaction, computeCompactionStatus, fixCompaction, runCompaction, parseEntries, parseFullEntries, parseOnelineEntries, splitArchive, extractResolvedSection, parseTodoResolved, SPECS, COMPACTABLE_YAML_ARTIFACTS, NON_COMPACTABLE_ARTIFACTS, YAML_SPEC_BY_ARTIFACT, formatTodoOneline, countTodoResolvedEntries, normalizeTodoResolvedLayout, overLimitCount, stableSortBy, yamlArchiveEntry, yamlArchiveEntries, yamlRecentFullAndOlder, yamlSortEntries, decisionProtectedOverflowCount, selectDecisionActiveEntries, selectDecisionArchiveEntries, };
 void _applyRetentionCaps;
 //# sourceMappingURL=index.js.map

package/dist/hooks/compaction/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/hooks/compaction/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AAEH,OAAO,EAAE,kBAAkB,IAAI,mBAAmB,EAAE,MAAM,cAAc,CAAC;AACzE,OAAO,EAAE,WAAW,EAAE,eAAe,EAAE,cAAc,EAAE,cAAc,EAAE,MAAM,YAAY,CAAC;AAC1F,OAAO,EAAE,eAAe,EAAE,uBAAuB,EAAE,aAAa,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AACrG,OAAO,EACL,YAAY,EACZ,gBAAgB,EAChB,mBAAmB,EACnB,YAAY,EACZ,sBAAsB,EACtB,iBAAiB,EACjB,wBAAwB,EACxB,2BAA2B,GAC5B,MAAM,YAAY,CAAC;AACpB,OAAO,EAAE,KAAK,EAAE,0BAA0B,EAAE,yBAAyB,EAAE,qBAAqB,EAAE,iBAAiB,EAAE,MAAM,aAAa,CAAC;AACrI,OAAO,EACL,cAAc,EACd,YAAY,EACZ,gBAAgB,EAChB,kBAAkB,EAClB,sBAAsB,EACtB,eAAe,EACf,8BAA8B,EAC9B,2BAA2B,EAC3B,4BAA4B,GAC7B,MAAM,gBAAgB,CAAC;AAIxB,OAAO,EACL,WAAW,EACX,eAAe,EACf,cAAc,EACd,cAAc,EACd,eAAe,EACf,uBAAuB,EACvB,aAAa,EACb,aAAa,EACb,YAAY,EACZ,gBAAgB,EAChB,mBAAmB,EACnB,YAAY,EACZ,sBAAsB,EACtB,iBAAiB,EACjB,KAAK,EACL,0BAA0B,EAC1B,yBAAyB,EACzB,qBAAqB,EACrB,iBAAiB,EACjB,wBAAwB,EACxB,2BAA2B,EAC3B,cAAc,EACd,YAAY,EACZ,gBAAgB,EAChB,kBAAkB,EAClB,sBAAsB,EACtB,eAAe,EACf,8BAA8B,EAC9B,2BAA2B,EAC3B,4BAA4B,GAC7B,CAAC;AAEF,KAAK,mBAAmB,CAAC"}

package/dist/hooks/compaction/parse.js

@@ -4,9 +4,14 @@
  * Splits a markdown artifact into "full" and "oneline" entries by
  * walking the spec's heading regex, then collects the trailing
  * detail body up to the next heading. The TODO-resolved section
- * uses indented detail lines as the body delimiter.
+ * uses indented detail lines as the body delimiter; open items stay
+ * in severity bands and resolved items belong only under
+ * `## ✓ Resolved`.
  */
-import { escapeRe } from "./dryRun.js";
+import { parseTodoMarkdownListItem } from "../../cli/todoMarkdown.js";
+import { SPECS, escapeRe } from "./dryRun.js";
+const SEVERITY_HEADING_RE = /^##\s*(⇶|⇉|→|⇢)\s/m;
+const STRIKETHROUGH_ITEM_RE = /^(\s*)-\s+~~(.+?)~~\s*(.*)$/;
 export function splitArchive(text, archiveHeading) {
     if (!archiveHeading)
         return [text, ""];
@@ -115,6 +120,131 @@ export function parseTodoResolved(text, spec) {
     }
     return entries;
 }
+export function isTodoSeveritySectionHeading(line) {
+    return SEVERITY_HEADING_RE.test(line.trim());
+}
+export function isTodoResolvedSectionHeading(line) {
+    return /^##\s*(?:✓\s+)?Resolved\s*$/im.test(line.trim());
+}
+export function classifyTodoSectionHeading(line) {
+    if (isTodoSeveritySectionHeading(line))
+        return "severity";
+    if (isTodoResolvedSectionHeading(line))
+        return "resolved";
+    if (/^##\s/.test(line.trim()))
+        return "other";
+    return "other";
+}
+export function strikethroughTodoLineToCheckbox(line) {
+    const m = STRIKETHROUGH_ITEM_RE.exec(line);
+    if (!m)
+        return null;
+    const tail = m[3]?.trim();
+    const body = m[2].trim();
+    return `${m[1]}- [x] ${body}${tail ? (tail.startsWith("·") ? ` ${tail}` : ` ${tail}`) : ""}`;
+}
+export function isLegacyStrikethroughTodoLine(line) {
+    return /^(\s*)-\s+~~/.test(line);
+}
+export function countTodoResolvedInSeverityBands(content) {
+    let count = 0;
+    let section = "other";
+    for (const line of content.split(/\r\n|\r|\n/)) {
+        const kind = classifyTodoSectionHeading(line);
+        if (kind !== "other" || /^##\s/.test(line.trim())) {
+            section = kind;
+            continue;
+        }
+        if (section !== "severity")
+            continue;
+        const trimmed = line.trim();
+        if (!trimmed.startsWith("-"))
+            continue;
+        const parsed = parseTodoMarkdownListItem(trimmed);
+        if (parsed?.status === "resolved" || isLegacyStrikethroughTodoLine(trimmed)) {
+            count += 1;
+        }
+    }
+    return count;
+}
+export function countTodoResolvedEntries(content) {
+    const spec = SPECS["todo-resolved"];
+    const resolvedSection = parseTodoResolved(content, spec);
+    const misplaced = countTodoResolvedInSeverityBands(content);
+    return {
+        full: resolvedSection.filter((e) => e.kind === "full").length,
+        oneline: resolvedSection.filter((e) => e.kind === "oneline").length + misplaced,
+    };
+}
+/**
+ * Move resolved rows from severity bands into `## ✓ Resolved`, creating the
+ * section when absent. Newly migrated rows are prepended (newest-first folds).
+ */
+export function normalizeTodoResolvedLayout(content) {
+    const lines = content.split(/\r\n|\r|\n/);
+    const beforeResolved = [];
+    const migratedResolved = [];
+    const existingResolved = [];
+    const afterResolved = [];
+    let section = "other";
+    let seenResolvedHeading = false;
+    for (const line of lines) {
+        const headingKind = classifyTodoSectionHeading(line);
+        if (headingKind === "resolved") {
+            seenResolvedHeading = true;
+            section = "resolved";
+            continue;
+        }
+        if (headingKind === "severity") {
+            section = "severity";
+            if (!seenResolvedHeading)
+                beforeResolved.push(line);
+            else
+                afterResolved.push(line);
+            continue;
+        }
+        if (/^##\s/.test(line.trim())) {
+            section = "other";
+            if (!seenResolvedHeading)
+                beforeResolved.push(line);
+            else
+                afterResolved.push(line);
+            continue;
+        }
+        const trimmed = line.trim();
+        if (section === "resolved") {
+            if (trimmed)
+                existingResolved.push(line);
+            continue;
+        }
+        if (section === "severity" && trimmed.startsWith("-")) {
+            const converted = strikethroughTodoLineToCheckbox(line) ?? line;
+            const parsed = parseTodoMarkdownListItem(converted.trim());
+            if (parsed?.status === "resolved" || isLegacyStrikethroughTodoLine(trimmed)) {
+                migratedResolved.push(converted.trim());
+                continue;
+            }
+        }
+        if (!seenResolvedHeading)
+            beforeResolved.push(line);
+        else
+            afterResolved.push(line);
+    }
+    if (migratedResolved.length === 0) {
+        return { text: content, changed: false };
+    }
+    const rebuilt = [...beforeResolved];
+    if (rebuilt.length > 0 && rebuilt[rebuilt.length - 1]?.trim() !== "")
+        rebuilt.push("");
+    rebuilt.push("## ✓ Resolved");
+    rebuilt.push(...migratedResolved, ...existingResolved);
+    if (afterResolved.length > 0) {
+        rebuilt.push("");
+        rebuilt.push(...afterResolved);
+    }
+    const text = rebuilt.join("\n").replace(/\n*$/, "\n");
+    return { text, changed: text !== content };
+}
 export function parseEntries(text, specName) {
     const spec = SPECS[specName];
     if (spec.name === "todo-resolved") {
@@ -125,5 +255,4 @@ export function parseEntries(text, specName) {
     const onelineEntries = parseOnelineEntries(archiveBody, spec);
     return [...fullEntries, ...onelineEntries];
 }
-import { SPECS } from "./dryRun.js";
 //# sourceMappingURL=parse.js.map

package/dist/hooks/compaction/parse.js.map

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package/dist/hooks/compaction/retention.js

@@ -148,6 +148,7 @@ export function yamlArchiveEntries(entries) {
 function decisionSatisfactionState(entry) {
     if (!entry || typeof entry !== "object")
         return null;
+    // cast: decision record fields read from parsed decisions.yaml
     const satisfaction = entry.satisfaction;
     if (!satisfaction || typeof satisfaction !== "object")
         return null;
@@ -157,6 +158,7 @@ function decisionSatisfactionState(entry) {
 function decisionRequiresUserReview(entry) {
     if (!entry || typeof entry !== "object")
         return true;
+    // cast: decision record fields read from parsed decisions.yaml
     const satisfaction = entry.satisfaction;
     if (!satisfaction || typeof satisfaction !== "object")
         return true;
@@ -191,7 +193,7 @@ export function selectDecisionArchiveEntries(archiveCandidates) {
     }
     const satisfied = archiveCandidates.filter((e) => !decisionRequiresUserReview(e));
     const keepSatisfied = yamlArchiveEntries(satisfied).slice(0, MAX_ONELINE_ENTRIES - protectedEntries.length);
-    return yamlArchiveEntries([...protectedEntries, ...keepSatisfied]);
+    return yamlSortEntries([...protectedEntries, ...keepSatisfied], "decisions");
 }
 export { applyRetentionCaps };
 //# sourceMappingURL=retention.js.map

package/dist/hooks/compaction/retention.js.map

@@ -1 +1 @@
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package/dist/hooks/compaction/status.js

@@ -13,7 +13,7 @@ import { loadYamlMapping } from "../../core/yaml.js";
 import { COMPACTABLE_YAML_ARTIFACTS, NON_COMPACTABLE_ARTIFACTS } from "./dryRun.js";
 import { decisionProtectedOverflowCount, overLimitCount, yamlArchiveEntries, } from "./retention.js";
 import { compactFile, compactYamlFile } from "./apply.js";
-import { parseEntries } from "./parse.js";
+import { countTodoResolvedEntries } from "./parse.js";
 import { YAML_SPEC_BY_ARTIFACT } from "./dryRun.js";
 function artifactPaths(projectRoot) {
     const paths = { ...DEFAULT_ARTIFACT_PATHS };
@@ -91,10 +91,8 @@ export function computeCompactionStatus(projectRoot) {
     const statuses = [];
     const todoPath = paths.todo;
     if (fs.existsSync(todoPath)) {
-        const entries = parseEntries(fs.readFileSync(todoPath, "utf8"), "todo-resolved");
-        const activeCount = entries.filter((e) => e.kind === "full").length;
-        const archiveCount = entries.filter((e) => e.kind === "oneline").length;
-        statuses.push(countStatus("todo#Resolved", todoPath, activeCount, archiveCount));
+        const counts = countTodoResolvedEntries(fs.readFileSync(todoPath, "utf8"));
+        statuses.push(countStatus("todo#Resolved", todoPath, counts.full, counts.oneline));
     }
     else {
         statuses.push(missingStatus("todo#Resolved", todoPath, "compactable"));
@@ -133,11 +131,11 @@ export function computeCompactionStatus(projectRoot) {
             exists: fs.existsSync(p),
         });
     }
-    const optimeraDir = path.join(projectRoot, ".agentera", "optimera");
-    if (fs.existsSync(optimeraDir) && fs.statSync(optimeraDir).isDirectory()) {
+    const optimizeDir = path.join(projectRoot, ".agentera", "optimize");
+    if (fs.existsSync(optimizeDir) && fs.statSync(optimizeDir).isDirectory()) {
         const experimentPaths = [];
-        for (const sub of fs.readdirSync(optimeraDir).sort()) {
-            const expPath = path.join(optimeraDir, sub, "experiments.yaml");
+        for (const sub of fs.readdirSync(optimizeDir).sort()) {
+            const expPath = path.join(optimizeDir, sub, "experiments.yaml");
             if (fs.existsSync(expPath))
                 experimentPaths.push(expPath);
         }

package/dist/hooks/compaction/status.js.map

@@ -1 +1 @@
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