agent-pipeline 0.1.0 → 0.1.2

package/CLAUDE.md

@@ -47,8 +47,6 @@ The pipeline executes in this order:
 
 **Output Extraction**: Agents report structured data via MCP `report_outputs` tool or text format. Tool-based extraction preserves types (objects, arrays, numbers). Text-based falls back to regex. Single reusable MCP server created via `OutputToolBuilder` with generic `z.record(z.string(), z.unknown())` schema.
 
-**Conditional Execution**: Condition Evaluator (`src/core/condition-evaluator.ts`) parses template expressions like `{{ stages.review.outputs.issues > 0 }}` and evaluates against pipeline state before delegation to the orchestrator.
-
 **Retry Mechanism**: Retry Handler (`src/core/retry-handler.ts`) implements exponential/linear/fixed backoff strategies. `StageExecutor` uses it to wrap agent execution with configurable retry logic.
 
 **UI Architecture**: Dual-mode operation - Interactive mode uses Ink/React terminal UI (`src/ui/pipeline-ui.tsx`) with real-time updates. Non-interactive mode uses simple console logging.
@@ -127,8 +125,11 @@ Tests use Vitest with extensive mocking:
 
 **Dry Run Mode**: When enabled, skip all git commits but execute agents. Useful for testing pipelines.
 
+**Publishing**: Always use `git tag vX.Y.Z` alongside `npm publish` so the git history and npm registry stay aligned.
+
 ### Development Flow
 When planning new features or fixes, if you notice the changes will require a large refactoring, only do a detailed plan of the first phase of required changes and ask user for review before the next phases. 
 
 ### Testing Style
-Spawn tasks or agents whenver you identify large patterned changes required in tests (eg. replace all instances of mockQuery(...) with mockRuntime.execute(...))
+Spawn tasks or agents whenver you identify large patterned changes required in tests (eg. replace all instances of mockQuery(...) with mockRuntime.execute(...))
+

package/{license → LICENSE}

@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) 2025 Fernando Rojas - FRE Studios 
+Copyright (c) 2025 Fernando Rojas | FRE Studios (https://fre-studios.com/)
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

package/README.md

@@ -1,28 +1,74 @@
 # Agent Pipeline
 
-> Intelligent agent orchestration with parallel execution, conditional logic, git workflow automation, and multi-channel notifications for Claude Code
+> Intelligent multi-runtime agent orchestration with DAG-planned parallelism, conditional logic, automated git hygiene, and multi-channel notifications. Supports Claude Code, Codex, and any OpenAI-compatible API.
 
-Last update: 2025-10-28
+<p align="center">
+  <video src="https://github.com/user-attachments/assets/eef9bda8-6184-45db-af6e-77307695f02e" width="720" autoplay loop muted playsinline></video>
+  <em>Running the front-end-parallel-example pipeline (9x speed)</em>
+  <br>
+  <strong><a href="https://fre-studios.github.io/Agent-Pipeline/examples/front-end-exploration/index.html">See what the agents built →</a></strong>
+</p>
 
-Agent Pipeline delivers an agent-driven CI/CD workflow with full visibility. Execute Claude agents with DAG-planned parallelism, conditional logic, retries, and automated git hygiene. Branch isolation, GitHub PR creation, local/Slack notifications, and a live terminal UI keep humans in the loop.
+## Key Use Cases 
 
-## Features
+- Offload common agentic tasks that consume time and context from the main agent loop.
+- Quickly explore new and divergent design concepts.
 
-- **Pipeline orchestration** – `PipelineRunner` combines DAG planning, conditional gating, and per-stage retries backed by `RetryHandler`.
-- **Git workflow automation** – `BranchManager` and `PRCreator` isolate work on dedicated branches and open PRs via GitHub CLI.
-- **State & context management** – `StateManager` persists run history while `ContextReducer` trims prompts using token-aware summaries and saved artifacts.
-- **Model flexibility** – Mix Haiku, Sonnet, and Opus models per stage for cost optimization (up to 90% savings on simple tasks).
-- **Cost controls** – Set `maxTurns` and `maxThinkingTokens` to prevent runaway agents and enable deep reasoning when needed.
-- **Observability** – Ink-powered live UI, interactive history browser, and analytics reports generated from stored run data.
-- **Notifications** – `NotificationManager` sends desktop and Slack notifications with event filtering and fail-safe delivery.
-- **Permission control** – Defaults to `acceptEdits` mode for automated workflows, respecting `.claude/settings.json` allow/deny rules.
-- **YAML-first configuration** – Schema-validated pipelines with structured agent outputs and customizable commit messages.
+## Agent Pipeline Ergonomics
+
+- Everything is a file in the filesystem
+- Agents are just `.md` files located in the `.agent-pipeline/agents/` directory.
+- Agents use the `handover.md` file for handoff to the next agent via `.agent-pipeline/instructions/handover.md`.
+- When looping is enabled, a dedicated loop agent runs after all stages to decide whether to queue the next iteration using `.agent-pipeline/instructions/loop.md`.
+
+```yaml
+name: my-pipeline 
+trigger: manual
+
+agents:
+  - name: first-agent
+    agent: .agent-pipeline/agents/first-agent.md
+
+  - name: second-agent
+    agent: .agent-pipeline/agents/second-agent.md
+    dependsOn: 
+      - first-agent
+```
+
+Capable models (Claude Opus/Sonnet, GPT-5.2, DeepSeek V3.2, etc.) can understand directions very well: you can tell any agent (in their respective `.md` file) to "pass X data to next agent" or "create new pipeline for next plan phase if plan status is not complete" and the agent and pipeline will perform as you expect.
+
+> **Note:** Looping must be enabled in the pipeline YAML for loops to run.
+
+## Quick Start
+
+```bash
+npm install -g agent-pipeline
+```
+
+Then `cd` into an empty or existing project directory and run:
+
+```bash
+agent-pipeline init
+```
+
+Finally, run a pipeline:
+
+```bash
+# For new/empty projects
+agent-pipeline run front-end-parallel-example
+
+# For existing projects with code changes
+agent-pipeline run post-commit-example
+```
 
 ## Prerequisites
 
 - **Node.js** (v18 or higher)
 - **Git** (configured with user name and email)
-- **Claude API Key** (set in environment or Claude Code settings)
+- **At least one agent runtime:**
+  - **Claude Code** (`claude` CLI) – default runtime with full tool suite
+  - **Codex** (`codex` CLI) – OpenAI's Codex with filesystem tools
+  - **OpenAI-compatible API key** – for any Chat Completions endpoint (OpenAI, DeepSeek, Together, Groq, Ollama, etc.)
 - **GitHub CLI** (`gh`) – optional unless you enable automated PR creation
   - Install: `brew install gh` (macOS) or [see docs](https://cli.github.com/)
   - Authenticate: `gh auth login`
@@ -45,31 +91,31 @@ npm run build
 npm link
 ```
 
-## Quick Start
+## Usage Guide
 
 ### 1. Initialize New Project
 
 ```bash
-# Initialize with minimal test pipeline
 agent-pipeline init
-
-# Initialize with a specific example
-agent-pipeline init post-commit
-
-# Initialize with all examples
-agent-pipeline init --all
 ```
 
-This scaffolds the `test-pipeline`, optional example pipelines, required agent definitions, and the directory structure (`.agent-pipeline/`, `.claude/agents/`). Agents from installed Claude Code plugins are automatically imported.
+This scaffolds three example pipelines (`front-end-parallel-example`, `post-commit-example`, and `loop-example`), required agent definitions, and the directory structure (`.agent-pipeline/`, `.agent-pipeline/agents/`). Agents from installed Claude Code plugins are automatically discovered, with support for additional runtime agent discovery coming soon.
 
 ### 2. Run Your First Pipeline
 
 ```bash
-# Run with interactive live UI (default)
-agent-pipeline run test-pipeline
+# Run the parallel design exploration (works on any project)
+agent-pipeline run front-end-parallel-example
+
+# For existing projects, try the post-commit workflow
+agent-pipeline run post-commit-example
+
+# Try the looping Socratic exploration (demonstrates iterative agents)
+agent-pipeline run loop-example
 ```
 
 **What you'll see:** live terminal UI with status badges, real-time agent output streaming, atomic commits per stage, and a pipeline summary with timing and results.
+Pipelines with git configured execute in isolated git worktrees by default, so your working directory stays untouched.
 
 ### 3. Explore Your Pipeline History
 
@@ -85,14 +131,12 @@ agent-pipeline analytics --pipeline <name> --days 30
 ### 4. Try Advanced Features
 
 ```bash
-# Parallel execution with DAG dependencies
-agent-pipeline run parallel-example
-
-# Conditional logic based on previous stage outputs
-agent-pipeline run conditional-example
+# Install git hooks for automated post-commit reviews
+agent-pipeline hooks install post-commit-example
+# Requires git.branchStrategy configured in the pipeline
 
-# Git workflow with branch isolation and PR creation
-agent-pipeline run git-workflow-example
+# Clone and customize a pipeline
+agent-pipeline clone front-end-parallel-example my-custom-pipeline
 ```
 
 ---
@@ -106,25 +150,28 @@ agent-pipeline run git-workflow-example
 name: my-pipeline
 trigger: manual
 
-settings:
+git:
   autoCommit: true
   commitPrefix: "[pipeline:{{stage}}]"
-  failureStrategy: continue
-  preserveWorkingTree: false
 
 agents:
   - name: code-review
-    agent: .claude/agents/code-reviewer.md
-    timeout: 120
+    agent: .agent-pipeline/agents/code-reviewer.md
+
+  - name: security-review
+    agent: .agent-pipeline/agents/security-reviewer.md
 
-  - name: code-reducer
-    agent: .claude/agents/code-reducer.md
+  - name: memory-updater
+    agent: .agent-pipeline/agents/memory-updater.md
+    dependsOn: 
+      - code-review
+      - security-review
 ```
 
 #### 2. Create Agent Definitions
 
 ```markdown
-<!-- .claude/agents/code-reviewer.md -->
+<!-- .agent-pipeline/agents/code-reviewer.md -->
 # Code Review Agent
 
 You are a code review agent in an automated pipeline.
@@ -144,8 +191,19 @@ agent-pipeline run my-pipeline
 - `docs/configuration.md` – Pipeline settings, git workflow, notifications, and context reduction details.
 - `docs/examples.md` – Ready-to-run sample pipelines shipped with the CLI.
 - `docs/cli.md` – Command reference for pipeline, agent, and git integration workflows.
-- `docs/data-flow-map.md` – Visual data flow diagrams showing how data moves through the system.
-- `docs/dev/` – Historical design notes and roadmap snapshots.
+
+## Features
+
+- **Pipeline orchestration** – `PipelineRunner` combines DAG planning, conditional gating, and per-stage retries backed by `RetryHandler`.
+- **Git workflow automation** – Worktrees isolate runs by default, while `BranchManager` and `PRCreator` manage dedicated branches and PRs.
+- **State & context management** – `StateManager` persists run history while `HandoverManager` enables filesystem-based communication between stages.
+- **Runtime flexibility** – Pluggable agent runtimes (Claude Code Headless, Claude SDK, Codex Headless, OpenAI-compatible) registered via `AgentRuntimeRegistry`.
+- **Model flexibility** – Mix models across runtimes and providers per stage for cost optimization (up to 90% savings on simple tasks).
+- **Cost controls** – Set `maxTurns` and `maxThinkingTokens` to prevent runaway agents and enable deep reasoning when needed.
+- **Observability** – Ink-powered live UI, interactive history browser, and analytics reports generated from stored run data.
+- **Notifications** – `NotificationManager` sends desktop and Slack notifications with event filtering and fail-safe delivery.
+- **Permission control** – Defaults to `acceptEdits` mode for automated workflows, respecting `.claude/settings.json` allow/deny rules.
+- **YAML-first configuration** – Schema-validated pipelines with filesystem-based stage handover and customizable commit messages.
 
 ## Architecture Overview
 
@@ -155,28 +213,35 @@ Key components:
 - `src/core/group-execution-orchestrator.ts` – Applies conditional logic, executes groups (parallel or sequential), and triggers context reduction.
 - `src/core/stage-executor.ts` – Runs individual agents with retries, token estimation, and git commits.
 - `src/core/state-manager.ts` – Persists pipeline state under `.agent-pipeline/state/runs/`.
+- `src/core/worktree-manager.ts` – Manages git worktrees for default pipeline isolation.
 - `src/core/branch-manager.ts` / `src/core/git-manager.ts` – Handle branch isolation and git commands.
+- `src/core/handover-manager.ts` – Manages filesystem-based stage communication via handover files.
 - `src/core/pr-creator.ts` – Integrates with GitHub CLI for PR automation.
+- `src/core/agent-runtime-registry.ts` – Registry for pluggable agent runtimes (Claude Code Headless, Claude SDK, Codex Headless, OpenAI-compatible).
 - `src/utils/token-estimator.ts` – Provides `smartCount()` for context window monitoring.
-- `src/ui/pipeline-ui.tsx` & `src/ui/history-browser.tsx` – Ink UIs for live runs and history browsing.
+- `src/ui/pipeline-ui.tsx` & `src/cli/commands/history.tsx` – Ink UIs for live runs and history browsing.
 - `src/analytics/pipeline-analytics.ts` – Generates aggregated metrics for the `analytics` command.
 - `src/notifications/notification-manager.ts` – Dispatches desktop and Slack notifications.
-- `src/cli/commands/` – Command implementations (`run`, `install`, `cleanup`, `rollback`, etc.).
+- `src/validators/` – Modular validation for pipeline structure, DAG, agents, and notifications.
+- `src/cli/commands/` – Command implementations (`run`, `cleanup`, `hooks`, `agent`, etc.).
 
 ```
 agent-pipeline/
-├── .agent-pipeline/                 # Pipeline definitions and run history
+├── .agent-pipeline/
+│   ├── agents/                      # Agent prompt definitions (.md files)
+│   ├── pipelines/                   # Pipeline configurations (.yml files)
+│   └── state/runs/                  # Persisted run history
 ├── docs/                            # User and developer documentation
-├── src/
-│   ├── analytics/
-│   ├── cli/commands/
-│   ├── config/
-│   ├── core/
-│   ├── notifications/
-│   ├── ui/
-│   ├── utils/
-│   └── index.ts                     # CLI entry point
-└── .claude/agents/                  # Example agent prompts
+└── src/
+    ├── analytics/                   # Metrics and reporting
+    ├── cli/commands/                # Command implementations
+    ├── config/                      # Schema and loader
+    ├── core/                        # Execution engine
+    ├── notifications/               # Desktop and Slack notifiers
+    ├── ui/                          # Ink terminal components
+    ├── utils/                       # Logging, errors, helpers
+    ├── validators/                  # Pipeline validation modules
+    └── index.ts                     # CLI entry point
 ```
 
 ## Git History Example

package/dist/cli/commands/agent/info.js

@@ -3,7 +3,7 @@ import * as path from 'path';
 import { PipelineLoader } from '../../../config/pipeline-loader.js';
 export async function agentInfoCommand(repoPath, agentName) {
     try {
-        const agentsDir = path.join(repoPath, '.claude', 'agents');
+        const agentsDir = path.join(repoPath, '.agent-pipeline', 'agents');
         let agentPath = path.join(agentsDir, `${agentName}.md`);
         try {
             await fs.access(agentPath);

package/dist/cli/commands/agent/info.js.map

@@ -1 +1 @@
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+{"version":3,"file":"info.js","sourceRoot":"","sources":["../../../../src/cli/commands/agent/info.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,aAAa,CAAC;AAClC,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAC7B,OAAO,EAAE,cAAc,EAAE,MAAM,oCAAoC,CAAC;AAEpE,MAAM,CAAC,KAAK,UAAU,gBAAgB,CACpC,QAAgB,EAChB,SAAiB;IAEjB,IAAI,CAAC;QACH,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,iBAAiB,EAAE,QAAQ,CAAC,CAAC;QAGnE,IAAI,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,GAAG,SAAS,KAAK,CAAC,CAAC;QAExD,IAAI,CAAC;YACH,MAAM,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;QAC7B,CAAC;QAAC,MAAM,CAAC;YAEP,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;YAC5C,MAAM,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;QAC7B,CAAC;QAGD,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;QACtD,MAAM,KAAK,GAAG,MAAM,EAAE,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;QAGvC,MAAM,MAAM,GAAG,IAAI,cAAc,CAAC,QAAQ,CAAC,CAAC;QAC5C,MAAM,YAAY,GAAG,MAAM,MAAM,CAAC,aAAa,EAAE,CAAC;QAClD,MAAM,cAAc,GAAa,EAAE,CAAC;QAEpC,KAAK,MAAM,YAAY,IAAI,YAAY,EAAE,CAAC;YACxC,IAAI,CAAC;gBACH,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,MAAM,CAAC,YAAY,CAAC,YAAY,CAAC,CAAC;gBAC3D,MAAM,SAAS,GAAG,IAAI,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC;gBAC3C,MAAM,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CACpC,CAAC,CAAC,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC;oBAC3B,CAAC,CAAC,KAAK,CAAC,QAAQ,CAAC,SAAS,CAAC,CAC5B,CAAC;gBACF,IAAI,MAAM,EAAE,CAAC;oBACX,cAAc,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;gBACpC,CAAC;YACH,CAAC;YAAC,MAAM,CAAC;YAET,CAAC;QACH,CAAC;QAGD,OAAO,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;QACnC,OAAO,CAAC,GAAG,CAAC,UAAU,IAAI,CAAC,QAAQ,CAAC,SAAS,EAAE,KAAK,CAAC,EAAE,CAAC,CAAC;QACzD,OAAO,CAAC,GAAG,CAAC,GAAG,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC;QAEnC,OAAO,CAAC,GAAG,CAAC,SAAS,IAAI,CAAC,QAAQ,CAAC,QAAQ,EAAE,SAAS,CAAC,EAAE,CAAC,CAAC;QAC3D,OAAO,CAAC,GAAG,CAAC,SAAS,KAAK,CAAC,IAAI,QAAQ,CAAC,CAAC;QACzC,OAAO,CAAC,GAAG,CAAC,aAAa,KAAK,CAAC,KAAK,CAAC,cAAc,EAAE,EAAE,CAAC,CAAC;QAEzD,IAAI,cAAc,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YAC9B,OAAO,CAAC,GAAG,CAAC,aAAa,cAAc,CAAC,MAAM,eAAe,CAAC,CAAC;YAC/D,cAAc,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,GAAG,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,CAAC;QACvD,CAAC;aAAM,CAAC;YACN,OAAO,CAAC,GAAG,CAAC,uCAAuC,CAAC,CAAC;QACvD,CAAC;QAED,OAAO,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC;QACrC,OAAO,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;QAC1B,OAAO,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QACrB,OAAO,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,IAAI,CAAC,CAAC;IAEvC,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,IAAK,KAAa,CAAC,IAAI,KAAK,QAAQ,EAAE,CAAC;YACrC,OAAO,CAAC,KAAK,CAAC,YAAY,SAAS,aAAa,CAAC,CAAC;YAClD,OAAO,CAAC,KAAK,CAAC,8DAA8D,CAAC,CAAC;QAChF,CAAC;aAAM,CAAC;YACN,OAAO,CAAC,KAAK,CAAC,gCAAiC,KAAe,CAAC,OAAO,EAAE,CAAC,CAAC;QAC5E,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;AACH,CAAC"}

package/dist/cli/commands/agent/list.js

@@ -2,7 +2,7 @@ import * as fs from 'fs/promises';
 import * as path from 'path';
 export async function listAgentsCommand(repoPath) {
     try {
-        const agentsDir = path.join(repoPath, '.claude', 'agents');
+        const agentsDir = path.join(repoPath, '.agent-pipeline', 'agents');
         try {
             await fs.access(agentsDir);
         }

package/dist/cli/commands/agent/list.js.map

@@ -1 +1 @@
-{"version":3,"file":"list.js","sourceRoot":"","sources":["../../../../src/cli/commands/agent/list.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,aAAa,CAAC;AAClC,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAS7B,MAAM,CAAC,KAAK,UAAU,iBAAiB,CAAC,QAAgB;IACtD,IAAI,CAAC;QACH,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,SAAS,EAAE,QAAQ,CAAC,CAAC;QAE3D,IAAI,CAAC;YACH,MAAM,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;QAC7B,CAAC;QAAC,MAAM,CAAC;YACP,OAAO,CAAC,GAAG,CAAC,6BAA6B,CAAC,CAAC;YAC3C,OAAO,CAAC,GAAG,CAAC,sDAAsD,CAAC,CAAC;YACpE,OAAO;QACT,CAAC;QAED,MAAM,KAAK,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC;QAC1C,MAAM,OAAO,GAAG,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,GAAG,CAAC,CAAC,CAAC;QAE3E,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YACzB,OAAO,CAAC,GAAG,CAAC,wBAAwB,CAAC,CAAC;YACtC,OAAO,CAAC,GAAG,CAAC,4CAA4C,CAAC,CAAC;YAC1D,OAAO,CAAC,GAAG,CAAC,gCAAgC,CAAC,CAAC;YAC9C,OAAO;QACT,CAAC;QAGD,MAAM,MAAM,GAAgB,EAAE,CAAC;QAE/B,KAAK,MAAM,IAAI,IAAI,OAAO,EAAE,CAAC;YAC3B,MAAM,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,CAAC,CAAC;YAC5C,MAAM,KAAK,GAAG,MAAM,EAAE,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;YACtC,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;YAGrD,MAAM,WAAW,GAAG,OAAO,CAAC,KAAK,CAAC,aAAa,CAAC,CAAC;YACjD,MAAM,WAAW,GAAG,WAAW,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,gBAAgB,CAAC;YAEpE,MAAM,CAAC,IAAI,CAAC;gBACV,IAAI,EAAE,IAAI,CAAC,QAAQ,CAAC,IAAI,EAAE,KAAK,CAAC;gBAChC,IAAI,EAAE,IAAI;gBACV,WAAW;gBACX,QAAQ,EAAE,KAAK,CAAC,KAAK;aACtB,CAAC,CAAC;QACL,CAAC;QAGD,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC;QAGpD,OAAO,CAAC,GAAG,CAAC,0BAA0B,MAAM,CAAC,MAAM,KAAK,CAAC,CAAC;QAC1D,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAC5B,OAAO,CAAC,GAAG,CACT,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC;YACjB,aAAa,CAAC,MAAM,CAAC,EAAE,CAAC;YACxB,UAAU,CACX,CAAC;QACF,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAE5B,KAAK,MAAM,KAAK,IAAI,MAAM,EAAE,CAAC;YAC3B,MAAM,WAAW,GAAG,KAAK,CAAC,QAAQ,CAAC,kBAAkB,EAAE,CAAC;YACxD,OAAO,CAAC,GAAG,CACT,KAAK,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC;gBACtC,KAAK,CAAC,WAAW,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC;gBAC7C,WAAW,CACZ,CAAC;QACJ,CAAC;QAED,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAC5B,OAAO,CAAC,GAAG,CAAC,mEAAmE,CAAC,CAAC;IACnF,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,KAAK,CAAC,4BAA6B,KAAe,CAAC,OAAO,EAAE,CAAC,CAAC;QACtE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;AACH,CAAC"}
+{"version":3,"file":"list.js","sourceRoot":"","sources":["../../../../src/cli/commands/agent/list.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,aAAa,CAAC;AAClC,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAS7B,MAAM,CAAC,KAAK,UAAU,iBAAiB,CAAC,QAAgB;IACtD,IAAI,CAAC;QACH,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,iBAAiB,EAAE,QAAQ,CAAC,CAAC;QAEnE,IAAI,CAAC;YACH,MAAM,EAAE,CAAC,MAAM,CAAC,SAAS,CAAC,CAAC;QAC7B,CAAC;QAAC,MAAM,CAAC;YACP,OAAO,CAAC,GAAG,CAAC,6BAA6B,CAAC,CAAC;YAC3C,OAAO,CAAC,GAAG,CAAC,sDAAsD,CAAC,CAAC;YACpE,OAAO;QACT,CAAC;QAED,MAAM,KAAK,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC;QAC1C,MAAM,OAAO,GAAG,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,UAAU,CAAC,GAAG,CAAC,CAAC,CAAC;QAE3E,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YACzB,OAAO,CAAC,GAAG,CAAC,wBAAwB,CAAC,CAAC;YACtC,OAAO,CAAC,GAAG,CAAC,4CAA4C,CAAC,CAAC;YAC1D,OAAO,CAAC,GAAG,CAAC,gCAAgC,CAAC,CAAC;YAC9C,OAAO;QACT,CAAC;QAGD,MAAM,MAAM,GAAgB,EAAE,CAAC;QAE/B,KAAK,MAAM,IAAI,IAAI,OAAO,EAAE,CAAC;YAC3B,MAAM,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,CAAC,CAAC;YAC5C,MAAM,KAAK,GAAG,MAAM,EAAE,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;YACtC,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;YAGrD,MAAM,WAAW,GAAG,OAAO,CAAC,KAAK,CAAC,aAAa,CAAC,CAAC;YACjD,MAAM,WAAW,GAAG,WAAW,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,gBAAgB,CAAC;YAEpE,MAAM,CAAC,IAAI,CAAC;gBACV,IAAI,EAAE,IAAI,CAAC,QAAQ,CAAC,IAAI,EAAE,KAAK,CAAC;gBAChC,IAAI,EAAE,IAAI;gBACV,WAAW;gBACX,QAAQ,EAAE,KAAK,CAAC,KAAK;aACtB,CAAC,CAAC;QACL,CAAC;QAGD,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC;QAGpD,OAAO,CAAC,GAAG,CAAC,0BAA0B,MAAM,CAAC,MAAM,KAAK,CAAC,CAAC;QAC1D,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAC5B,OAAO,CAAC,GAAG,CACT,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC;YACjB,aAAa,CAAC,MAAM,CAAC,EAAE,CAAC;YACxB,UAAU,CACX,CAAC;QACF,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAE5B,KAAK,MAAM,KAAK,IAAI,MAAM,EAAE,CAAC;YAC3B,MAAM,WAAW,GAAG,KAAK,CAAC,QAAQ,CAAC,kBAAkB,EAAE,CAAC;YACxD,OAAO,CAAC,GAAG,CACT,KAAK,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC;gBACtC,KAAK,CAAC,WAAW,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC;gBAC7C,WAAW,CACZ,CAAC;QACJ,CAAC;QAED,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAC5B,OAAO,CAAC,GAAG,CAAC,mEAAmE,CAAC,CAAC;IACnF,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,KAAK,CAAC,4BAA6B,KAAe,CAAC,OAAO,EAAE,CAAC,CAAC;QACtE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;AACH,CAAC"}

package/dist/cli/commands/agent/pull.d.ts

@@ -1,5 +1,6 @@
 export interface PullAgentsOptions {
     source?: string;
+    all?: boolean;
 }
 export declare function pullAgentsCommand(repoPath: string, options?: PullAgentsOptions): Promise<void>;
 //# sourceMappingURL=pull.d.ts.map

package/dist/cli/commands/agent/pull.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"pull.d.ts","sourceRoot":"","sources":["../../../../src/cli/commands/agent/pull.ts"],"names":[],"mappings":"AAOA,MAAM,WAAW,iBAAiB;IAChC,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,wBAAsB,iBAAiB,CACrC,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE,iBAAsB,GAC9B,OAAO,CAAC,IAAI,CAAC,CA4Ff"}
+{"version":3,"file":"pull.d.ts","sourceRoot":"","sources":["../../../../src/cli/commands/agent/pull.ts"],"names":[],"mappings":"AAOA,MAAM,WAAW,iBAAiB;IAChC,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,GAAG,CAAC,EAAE,OAAO,CAAC;CACf;AAED,wBAAsB,iBAAiB,CACrC,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE,iBAAsB,GAC9B,OAAO,CAAC,IAAI,CAAC,CAsDf"}

package/dist/cli/commands/agent/pull.js

@@ -3,62 +3,35 @@ import * as path from 'path';
 import { AgentImporter } from '../../utils/agent-importer.js';
 import { InteractivePrompts } from '../../utils/interactive-prompts.js';
 export async function pullAgentsCommand(repoPath, options = {}) {
-    const agentsDir = path.join(repoPath, '.claude', 'agents');
+    const agentsDir = path.join(repoPath, '.agent-pipeline', 'agents');
     try {
         await fs.mkdir(agentsDir, { recursive: true });
         if (options.source) {
             console.log('⚠️  Custom source pull not yet implemented');
             console.log('   Falling back to Claude Code plugins\n');
         }
-        const summary = await AgentImporter.importPluginAgents(agentsDir);
-        if (summary.total === 0) {
+        console.log('\n📦 Searching for Claude Code plugin agents...');
+        const discoveredAgents = await AgentImporter.discoverPluginAgents();
+        if (discoveredAgents.length === 0) {
             console.log('\n💡 Tips for adding agents:');
             console.log('   1. Install Claude Code plugins with agent collections');
-            console.log('   2. Create custom agents in .claude/agents/');
+            console.log('   2. Create custom agents in .agent-pipeline/agents/');
             console.log('   3. Import agents from files or URLs (coming soon)\n');
             return;
         }
-        if (summary.skipped > 0) {
-            console.log(`\n⚠️  ${summary.skipped} agent(s) already exist\n`);
-            const update = await InteractivePrompts.confirm('Would you like to see which agents have updates available?', true);
-            if (update) {
-                console.log('\n📊 Checking for agent updates...\n');
-                for (const agent of summary.agents) {
-                    const targetPath = path.join(agentsDir, agent.targetName);
-                    try {
-                        await fs.access(targetPath);
-                        const existing = await fs.readFile(targetPath, 'utf-8');
-                        const source = await fs.readFile(agent.originalPath, 'utf-8');
-                        const cleanExisting = existing.replace(/<!--[\s\S]*?-->\n\n/, '');
-                        const cleanSource = source;
-                        if (cleanExisting !== cleanSource) {
-                            console.log(`   📝 ${agent.agentName} - UPDATE AVAILABLE`);
-                            const override = await InteractivePrompts.confirm(`      Update ${agent.agentName}?`, false);
-                            if (override) {
-                                const enhancedContent = `<!--
-Imported from Claude Code Plugin
-Marketplace: ${agent.marketplace}
-Plugin: ${agent.plugin}
-Original: ${agent.agentName}.md
-Imported: ${new Date().toISOString()}
-Updated: ${new Date().toISOString()}
--->
-
-${cleanSource}`;
-                                await fs.writeFile(targetPath, enhancedContent, 'utf-8');
-                                console.log(`      ✅ Updated\n`);
-                            }
-                            else {
-                                console.log(`      ⏭️  Skipped\n`);
-                            }
-                        }
-                    }
-                    catch {
-                    }
-                }
-            }
+        console.log(`   Found ${discoveredAgents.length} agent(s) across installed plugins\n`);
+        if (options.all) {
+            await AgentImporter.importPluginAgents(agentsDir, { silent: true });
+            await showImportSummary(agentsDir, discoveredAgents);
+            return;
+        }
+        const selectedAgents = await selectAgentsInteractively(discoveredAgents);
+        if (selectedAgents.length === 0) {
+            console.log('\nNo agents selected. Exiting.\n');
+            return;
         }
-        console.log('\n✅ Agent pull complete!\n');
+        await AgentImporter.importSelectedAgents(agentsDir, selectedAgents);
+        console.log('✅ Agent pull complete!\n');
         console.log('💡 Next steps:');
         console.log('   - View agents: agent-pipeline agent list');
         console.log('   - Create pipeline: agent-pipeline create\n');
@@ -68,4 +41,54 @@ ${cleanSource}`;
         process.exit(1);
     }
 }
+async function selectAgentsInteractively(agents) {
+    const grouped = agents.reduce((acc, agent) => {
+        const key = `${agent.marketplace}/${agent.plugin}`;
+        if (!acc[key])
+            acc[key] = [];
+        acc[key].push(agent);
+        return acc;
+    }, {});
+    const options = [];
+    const agentMap = new Map();
+    for (const [pluginKey, pluginAgents] of Object.entries(grouped)) {
+        for (const agent of pluginAgents) {
+            const key = `${agent.marketplace}:${agent.plugin}:${agent.agentName}`;
+            options.push({
+                name: `${agent.agentName} (${pluginKey})`,
+                value: key
+            });
+            agentMap.set(key, agent);
+        }
+    }
+    const selectedKeys = await InteractivePrompts.multiSelect('\nSelect agents to import:', options);
+    return selectedKeys
+        .map(key => agentMap.get(key))
+        .filter((agent) => agent !== undefined);
+}
+async function showImportSummary(agentsDir, agents) {
+    let imported = 0;
+    let skipped = 0;
+    for (const agent of agents) {
+        const targetPath = path.join(agentsDir, agent.targetName);
+        try {
+            await fs.access(targetPath);
+            const content = await fs.readFile(targetPath, 'utf-8');
+            if (content.includes('Imported from Claude Code Plugin')) {
+                imported++;
+            }
+            else {
+                skipped++;
+            }
+        }
+        catch {
+            skipped++;
+        }
+    }
+    console.log(`\n📊 Import complete: ${imported} imported, ${skipped} skipped\n`);
+    console.log('✅ Agent pull complete!\n');
+    console.log('💡 Next steps:');
+    console.log('   - View agents: agent-pipeline agent list');
+    console.log('   - Create pipeline: agent-pipeline create\n');
+}
 //# sourceMappingURL=pull.js.map

package/dist/cli/commands/agent/pull.js.map

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package/dist/cli/commands/cleanup.d.ts

@@ -2,6 +2,10 @@ export interface CleanupOptions {
     pipeline?: string;
     force?: boolean;
     deleteLogs?: boolean;
+    worktrees?: boolean;
+    all?: boolean;
+    prefix?: string;
+    deleteRemote?: boolean;
 }
 export declare function cleanupCommand(repoPath: string, options?: CleanupOptions): Promise<void>;
 //# sourceMappingURL=cleanup.d.ts.map

package/dist/cli/commands/cleanup.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"cleanup.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/cleanup.ts"],"names":[],"mappings":"AAUA,MAAM,WAAW,cAAc;IAC7B,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,UAAU,CAAC,EAAE,OAAO,CAAC;IACrB,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,YAAY,CAAC,EAAE,OAAO,CAAC;CACxB;AAED,wBAAsB,cAAc,CAClC,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE,cAAmB,GAC3B,OAAO,CAAC,IAAI,CAAC,CAkNf"}