aether-colony 3.1.17 β†’ 5.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (378) hide show
  1. package/.aether/aether-utils.sh +5354 -0
  2. package/.aether/agents-claude/aether-ambassador.md +265 -0
  3. package/.aether/agents-claude/aether-archaeologist.md +327 -0
  4. package/.aether/agents-claude/aether-architect.md +236 -0
  5. package/.aether/agents-claude/aether-auditor.md +271 -0
  6. package/.aether/agents-claude/aether-builder.md +224 -0
  7. package/.aether/agents-claude/aether-chaos.md +269 -0
  8. package/.aether/agents-claude/aether-chronicler.md +305 -0
  9. package/.aether/agents-claude/aether-gatekeeper.md +330 -0
  10. package/.aether/agents-claude/aether-includer.md +374 -0
  11. package/.aether/agents-claude/aether-keeper.md +272 -0
  12. package/.aether/agents-claude/aether-measurer.md +322 -0
  13. package/.aether/agents-claude/aether-oracle.md +237 -0
  14. package/.aether/agents-claude/aether-probe.md +211 -0
  15. package/.aether/agents-claude/aether-queen.md +330 -0
  16. package/.aether/agents-claude/aether-route-setter.md +178 -0
  17. package/.aether/agents-claude/aether-sage.md +418 -0
  18. package/.aether/agents-claude/aether-scout.md +179 -0
  19. package/.aether/agents-claude/aether-surveyor-disciplines.md +417 -0
  20. package/.aether/agents-claude/aether-surveyor-nest.md +355 -0
  21. package/.aether/agents-claude/aether-surveyor-pathogens.md +289 -0
  22. package/.aether/agents-claude/aether-surveyor-provisions.md +360 -0
  23. package/.aether/agents-claude/aether-tracker.md +270 -0
  24. package/.aether/agents-claude/aether-watcher.md +280 -0
  25. package/.aether/agents-claude/aether-weaver.md +248 -0
  26. package/.aether/commands/archaeology.yaml +653 -0
  27. package/.aether/commands/build.yaml +1221 -0
  28. package/.aether/commands/chaos.yaml +653 -0
  29. package/.aether/commands/colonize.yaml +438 -0
  30. package/.aether/commands/continue.yaml +1484 -0
  31. package/.aether/commands/council.yaml +304 -0
  32. package/.aether/commands/data-clean.yaml +80 -0
  33. package/.aether/commands/dream.yaml +275 -0
  34. package/.aether/commands/entomb.yaml +863 -0
  35. package/.aether/commands/export-signals.yaml +64 -0
  36. package/.aether/commands/feedback.yaml +158 -0
  37. package/.aether/commands/flag.yaml +160 -0
  38. package/.aether/commands/flags.yaml +177 -0
  39. package/.aether/commands/focus.yaml +112 -0
  40. package/.aether/commands/help.yaml +167 -0
  41. package/.aether/commands/history.yaml +137 -0
  42. package/.aether/commands/import-signals.yaml +79 -0
  43. package/.aether/commands/init.yaml +469 -0
  44. package/.aether/commands/insert-phase.yaml +98 -0
  45. package/.aether/commands/interpret.yaml +285 -0
  46. package/.aether/commands/lay-eggs.yaml +224 -0
  47. package/.aether/commands/maturity.yaml +122 -0
  48. package/.aether/commands/memory-details.yaml +74 -0
  49. package/.aether/commands/migrate-state.yaml +174 -0
  50. package/.aether/commands/oracle.yaml +1224 -0
  51. package/.aether/commands/organize.yaml +446 -0
  52. package/.aether/commands/patrol.yaml +621 -0
  53. package/.aether/commands/pause-colony.yaml +424 -0
  54. package/.aether/commands/phase.yaml +124 -0
  55. package/.aether/commands/pheromones.yaml +153 -0
  56. package/.aether/commands/plan.yaml +1313 -0
  57. package/.aether/commands/preferences.yaml +63 -0
  58. package/.aether/commands/redirect.yaml +123 -0
  59. package/.aether/commands/resume-colony.yaml +373 -0
  60. package/.aether/commands/resume.yaml +398 -0
  61. package/.aether/commands/run.yaml +193 -0
  62. package/.aether/commands/seal.yaml +1205 -0
  63. package/.aether/commands/skill-create.yaml +337 -0
  64. package/.aether/commands/status.yaml +364 -0
  65. package/.aether/commands/swarm.yaml +352 -0
  66. package/.aether/commands/tunnels.yaml +814 -0
  67. package/.aether/commands/update.yaml +131 -0
  68. package/.aether/commands/verify-castes.yaml +159 -0
  69. package/.aether/commands/watch.yaml +454 -0
  70. package/.aether/docs/INCIDENT_TEMPLATE.md +32 -0
  71. package/.aether/docs/QUEEN-SYSTEM.md +211 -0
  72. package/.aether/docs/README.md +98 -0
  73. package/.aether/docs/caste-system.md +48 -0
  74. package/.aether/docs/command-playbooks/README.md +23 -0
  75. package/.aether/docs/command-playbooks/build-complete.md +349 -0
  76. package/.aether/docs/command-playbooks/build-context.md +282 -0
  77. package/.aether/docs/command-playbooks/build-full.md +1682 -0
  78. package/.aether/docs/command-playbooks/build-prep.md +283 -0
  79. package/.aether/docs/command-playbooks/build-verify.md +405 -0
  80. package/.aether/docs/command-playbooks/build-wave.md +749 -0
  81. package/.aether/docs/command-playbooks/continue-advance.md +524 -0
  82. package/.aether/docs/command-playbooks/continue-finalize.md +447 -0
  83. package/.aether/docs/command-playbooks/continue-full.md +1724 -0
  84. package/.aether/docs/command-playbooks/continue-gates.md +686 -0
  85. package/.aether/docs/command-playbooks/continue-verify.md +406 -0
  86. package/.aether/docs/context-continuity.md +84 -0
  87. package/{runtime β†’ .aether/docs/disciplines}/DISCIPLINES.md +13 -11
  88. package/.aether/docs/error-codes.md +268 -0
  89. package/.aether/docs/known-issues.md +94 -0
  90. package/{runtime β†’ .aether}/docs/pheromones.md +86 -6
  91. package/.aether/docs/plans/pheromone-display-plan.md +257 -0
  92. package/.aether/docs/queen-commands.md +98 -0
  93. package/.aether/docs/source-of-truth-map.md +132 -0
  94. package/.aether/docs/xml-utilities.md +47 -0
  95. package/{runtime β†’ .aether}/exchange/pheromone-xml.sh +2 -1
  96. package/{runtime β†’ .aether}/exchange/registry-xml.sh +7 -3
  97. package/{runtime β†’ .aether}/exchange/wisdom-xml.sh +11 -4
  98. package/.aether/rules/aether-colony.md +144 -0
  99. package/.aether/schemas/example-prompt-builder.xml +234 -0
  100. package/.aether/scripts/incident-test-add.sh +47 -0
  101. package/.aether/scripts/weekly-audit.sh +79 -0
  102. package/.aether/skills/.index.json +649 -0
  103. package/.aether/skills/colony/.manifest.json +16 -0
  104. package/.aether/skills/colony/build-discipline/SKILL.md +78 -0
  105. package/.aether/skills/colony/colony-interaction/SKILL.md +56 -0
  106. package/.aether/skills/colony/colony-lifecycle/SKILL.md +77 -0
  107. package/.aether/skills/colony/colony-visuals/SKILL.md +112 -0
  108. package/.aether/skills/colony/context-management/SKILL.md +80 -0
  109. package/.aether/skills/colony/error-presentation/SKILL.md +99 -0
  110. package/.aether/skills/colony/pheromone-protocol/SKILL.md +79 -0
  111. package/.aether/skills/colony/pheromone-visibility/SKILL.md +81 -0
  112. package/.aether/skills/colony/state-safety/SKILL.md +84 -0
  113. package/.aether/skills/colony/worker-priming/SKILL.md +82 -0
  114. package/.aether/skills/domain/.manifest.json +24 -0
  115. package/.aether/skills/domain/README.md +33 -0
  116. package/.aether/skills/domain/django/SKILL.md +49 -0
  117. package/.aether/skills/domain/docker/SKILL.md +52 -0
  118. package/.aether/skills/domain/golang/SKILL.md +52 -0
  119. package/.aether/skills/domain/graphql/SKILL.md +51 -0
  120. package/.aether/skills/domain/html-css/SKILL.md +48 -0
  121. package/.aether/skills/domain/nextjs/SKILL.md +45 -0
  122. package/.aether/skills/domain/nodejs/SKILL.md +53 -0
  123. package/.aether/skills/domain/postgresql/SKILL.md +53 -0
  124. package/.aether/skills/domain/prisma/SKILL.md +59 -0
  125. package/.aether/skills/domain/python/SKILL.md +50 -0
  126. package/.aether/skills/domain/rails/SKILL.md +52 -0
  127. package/.aether/skills/domain/react/SKILL.md +45 -0
  128. package/.aether/skills/domain/rest-api/SKILL.md +58 -0
  129. package/.aether/skills/domain/svelte/SKILL.md +47 -0
  130. package/.aether/skills/domain/tailwind/SKILL.md +45 -0
  131. package/.aether/skills/domain/testing/SKILL.md +53 -0
  132. package/.aether/skills/domain/typescript/SKILL.md +58 -0
  133. package/.aether/skills/domain/vue/SKILL.md +49 -0
  134. package/.aether/templates/QUEEN.md.template +61 -0
  135. package/.aether/templates/colony-state-reset.jq.template +23 -0
  136. package/.aether/templates/colony-state.template.json +39 -0
  137. package/.aether/templates/constraints.template.json +9 -0
  138. package/.aether/templates/crowned-anthill.template.md +36 -0
  139. package/.aether/templates/handoff-build-error.template.md +30 -0
  140. package/.aether/templates/handoff-build-success.template.md +39 -0
  141. package/.aether/templates/handoff.template.md +40 -0
  142. package/.aether/templates/learning-observations.template.json +6 -0
  143. package/.aether/templates/midden.template.json +13 -0
  144. package/.aether/templates/pheromones.template.json +6 -0
  145. package/.aether/templates/session.template.json +9 -0
  146. package/{runtime β†’ .aether}/utils/atomic-write.sh +68 -22
  147. package/{runtime β†’ .aether}/utils/chamber-compare.sh +23 -10
  148. package/.aether/utils/chamber-utils.sh +440 -0
  149. package/.aether/utils/emoji-audit.sh +166 -0
  150. package/{runtime β†’ .aether}/utils/error-handler.sh +34 -8
  151. package/.aether/utils/file-lock.sh +313 -0
  152. package/.aether/utils/flag.sh +267 -0
  153. package/.aether/utils/hive.sh +572 -0
  154. package/.aether/utils/learning.sh +1928 -0
  155. package/.aether/utils/midden.sh +342 -0
  156. package/.aether/utils/oracle/oracle.md +168 -0
  157. package/.aether/utils/oracle/oracle.sh +1023 -0
  158. package/.aether/utils/pheromone.sh +2029 -0
  159. package/.aether/utils/queen.sh +1698 -0
  160. package/.aether/utils/scan.sh +860 -0
  161. package/.aether/utils/semantic-cli.sh +415 -0
  162. package/.aether/utils/session.sh +552 -0
  163. package/.aether/utils/skills.sh +509 -0
  164. package/.aether/utils/spawn-tree.sh +260 -0
  165. package/.aether/utils/spawn.sh +260 -0
  166. package/.aether/utils/state-api.sh +199 -0
  167. package/{runtime β†’ .aether}/utils/state-loader.sh +8 -6
  168. package/.aether/utils/suggest.sh +611 -0
  169. package/{runtime β†’ .aether}/utils/swarm-display.sh +10 -1
  170. package/.aether/utils/swarm.sh +1004 -0
  171. package/{runtime β†’ .aether}/utils/watch-spawn-tree.sh +11 -2
  172. package/{runtime β†’ .aether}/utils/xml-compose.sh +9 -3
  173. package/.aether/utils/xml-convert.sh +277 -0
  174. package/{runtime β†’ .aether}/utils/xml-core.sh +5 -9
  175. package/.aether/utils/xml-query.sh +201 -0
  176. package/.aether/utils/xml-utils.sh +110 -0
  177. package/{runtime β†’ .aether}/workers.md +97 -81
  178. package/.claude/agents/ant/aether-ambassador.md +265 -0
  179. package/.claude/agents/ant/aether-archaeologist.md +327 -0
  180. package/.claude/agents/ant/aether-architect.md +236 -0
  181. package/.claude/agents/ant/aether-auditor.md +271 -0
  182. package/.claude/agents/ant/aether-builder.md +224 -0
  183. package/.claude/agents/ant/aether-chaos.md +269 -0
  184. package/.claude/agents/ant/aether-chronicler.md +305 -0
  185. package/.claude/agents/ant/aether-gatekeeper.md +330 -0
  186. package/.claude/agents/ant/aether-includer.md +374 -0
  187. package/.claude/agents/ant/aether-keeper.md +272 -0
  188. package/.claude/agents/ant/aether-measurer.md +322 -0
  189. package/.claude/agents/ant/aether-oracle.md +237 -0
  190. package/.claude/agents/ant/aether-probe.md +211 -0
  191. package/.claude/agents/ant/aether-queen.md +330 -0
  192. package/.claude/agents/ant/aether-route-setter.md +178 -0
  193. package/.claude/agents/ant/aether-sage.md +418 -0
  194. package/.claude/agents/ant/aether-scout.md +179 -0
  195. package/.claude/agents/ant/aether-surveyor-disciplines.md +417 -0
  196. package/.claude/agents/ant/aether-surveyor-nest.md +355 -0
  197. package/.claude/agents/ant/aether-surveyor-pathogens.md +289 -0
  198. package/.claude/agents/ant/aether-surveyor-provisions.md +360 -0
  199. package/.claude/agents/ant/aether-tracker.md +270 -0
  200. package/.claude/agents/ant/aether-watcher.md +280 -0
  201. package/.claude/agents/ant/aether-weaver.md +248 -0
  202. package/.claude/commands/ant/archaeology.md +16 -14
  203. package/.claude/commands/ant/build.md +43 -1028
  204. package/.claude/commands/ant/chaos.md +19 -23
  205. package/.claude/commands/ant/colonize.md +52 -31
  206. package/.claude/commands/ant/continue.md +40 -1016
  207. package/.claude/commands/ant/council.md +21 -18
  208. package/.claude/commands/ant/data-clean.md +81 -0
  209. package/.claude/commands/ant/dream.md +27 -15
  210. package/.claude/commands/ant/entomb.md +317 -225
  211. package/.claude/commands/ant/export-signals.md +57 -0
  212. package/.claude/commands/ant/feedback.md +48 -26
  213. package/.claude/commands/ant/flag.md +30 -10
  214. package/.claude/commands/ant/flags.md +34 -12
  215. package/.claude/commands/ant/focus.md +45 -19
  216. package/.claude/commands/ant/help.md +50 -8
  217. package/.claude/commands/ant/history.md +13 -0
  218. package/.claude/commands/ant/import-signals.md +71 -0
  219. package/.claude/commands/ant/init.md +345 -194
  220. package/.claude/commands/ant/insert-phase.md +101 -0
  221. package/.claude/commands/ant/interpret.md +26 -4
  222. package/.claude/commands/ant/lay-eggs.md +184 -127
  223. package/.claude/commands/ant/maturity.md +32 -11
  224. package/.claude/commands/ant/memory-details.md +77 -0
  225. package/.claude/commands/ant/migrate-state.md +20 -2
  226. package/.claude/commands/ant/oracle.md +337 -74
  227. package/.claude/commands/ant/organize.md +39 -25
  228. package/.claude/commands/ant/patrol.md +620 -0
  229. package/.claude/commands/ant/pause-colony.md +23 -27
  230. package/.claude/commands/ant/phase.md +40 -42
  231. package/.claude/commands/ant/pheromones.md +156 -0
  232. package/.claude/commands/ant/plan.md +185 -51
  233. package/.claude/commands/ant/preferences.md +65 -0
  234. package/.claude/commands/ant/redirect.md +45 -30
  235. package/.claude/commands/ant/resume-colony.md +51 -27
  236. package/.claude/commands/ant/resume.md +314 -94
  237. package/.claude/commands/ant/run.md +195 -0
  238. package/.claude/commands/ant/seal.md +650 -221
  239. package/.claude/commands/ant/skill-create.md +286 -0
  240. package/.claude/commands/ant/status.md +196 -31
  241. package/.claude/commands/ant/swarm.md +16 -46
  242. package/.claude/commands/ant/tunnels.md +280 -105
  243. package/.claude/commands/ant/update.md +73 -89
  244. package/.claude/commands/ant/verify-castes.md +100 -42
  245. package/.claude/commands/ant/watch.md +14 -12
  246. package/.opencode/agents/aether-ambassador.md +63 -20
  247. package/.opencode/agents/aether-archaeologist.md +29 -12
  248. package/.opencode/agents/aether-architect.md +103 -36
  249. package/.opencode/agents/aether-auditor.md +51 -18
  250. package/.opencode/agents/aether-builder.md +70 -20
  251. package/.opencode/agents/aether-chaos.md +29 -12
  252. package/.opencode/agents/aether-chronicler.md +60 -18
  253. package/.opencode/agents/aether-gatekeeper.md +27 -18
  254. package/.opencode/agents/aether-includer.md +27 -18
  255. package/.opencode/agents/aether-keeper.md +89 -18
  256. package/.opencode/agents/aether-measurer.md +27 -18
  257. package/.opencode/agents/aether-oracle.md +137 -0
  258. package/.opencode/agents/aether-probe.md +60 -18
  259. package/.opencode/agents/aether-queen.md +172 -24
  260. package/.opencode/agents/aether-route-setter.md +57 -12
  261. package/.opencode/agents/aether-sage.md +26 -18
  262. package/.opencode/agents/aether-scout.md +28 -20
  263. package/.opencode/agents/aether-surveyor-disciplines.md +59 -2
  264. package/.opencode/agents/aether-surveyor-nest.md +59 -2
  265. package/.opencode/agents/aether-surveyor-pathogens.md +57 -2
  266. package/.opencode/agents/aether-surveyor-provisions.md +59 -2
  267. package/.opencode/agents/aether-tracker.md +64 -18
  268. package/.opencode/agents/aether-watcher.md +66 -19
  269. package/.opencode/agents/aether-weaver.md +61 -18
  270. package/.opencode/commands/ant/archaeology.md +7 -14
  271. package/.opencode/commands/ant/build.md +437 -257
  272. package/.opencode/commands/ant/chaos.md +7 -24
  273. package/.opencode/commands/ant/colonize.md +8 -17
  274. package/.opencode/commands/ant/continue.md +661 -142
  275. package/.opencode/commands/ant/council.md +11 -22
  276. package/.opencode/commands/ant/data-clean.md +77 -0
  277. package/.opencode/commands/ant/dream.md +15 -17
  278. package/.opencode/commands/ant/entomb.md +133 -62
  279. package/.opencode/commands/ant/export-signals.md +54 -0
  280. package/.opencode/commands/ant/feedback.md +24 -5
  281. package/.opencode/commands/ant/flag.md +16 -4
  282. package/.opencode/commands/ant/flags.md +24 -10
  283. package/.opencode/commands/ant/focus.md +22 -5
  284. package/.opencode/commands/ant/help.md +41 -8
  285. package/.opencode/commands/ant/history.md +9 -0
  286. package/.opencode/commands/ant/import-signals.md +68 -0
  287. package/.opencode/commands/ant/init.md +374 -167
  288. package/.opencode/commands/ant/insert-phase.md +107 -0
  289. package/.opencode/commands/ant/interpret.md +16 -0
  290. package/.opencode/commands/ant/lay-eggs.md +184 -112
  291. package/.opencode/commands/ant/maturity.md +18 -2
  292. package/.opencode/commands/ant/memory-details.md +83 -0
  293. package/.opencode/commands/ant/migrate-state.md +12 -0
  294. package/.opencode/commands/ant/oracle.md +322 -67
  295. package/.opencode/commands/ant/organize.md +18 -16
  296. package/.opencode/commands/ant/patrol.md +626 -0
  297. package/.opencode/commands/ant/pause-colony.md +12 -29
  298. package/.opencode/commands/ant/phase.md +30 -40
  299. package/.opencode/commands/ant/pheromones.md +162 -0
  300. package/.opencode/commands/ant/plan.md +184 -56
  301. package/.opencode/commands/ant/preferences.md +71 -0
  302. package/.opencode/commands/ant/redirect.md +22 -5
  303. package/.opencode/commands/ant/resume-colony.md +38 -27
  304. package/.opencode/commands/ant/resume.md +385 -0
  305. package/.opencode/commands/ant/run.md +201 -0
  306. package/.opencode/commands/ant/seal.md +259 -45
  307. package/.opencode/commands/ant/skill-create.md +63 -0
  308. package/.opencode/commands/ant/status.md +135 -31
  309. package/.opencode/commands/ant/swarm.md +3 -345
  310. package/.opencode/commands/ant/tunnels.md +152 -9
  311. package/.opencode/commands/ant/update.md +70 -91
  312. package/.opencode/commands/ant/verify-castes.md +96 -42
  313. package/.opencode/commands/ant/watch.md +7 -0
  314. package/CHANGELOG.md +356 -0
  315. package/README.md +203 -573
  316. package/bin/cli.js +455 -527
  317. package/bin/generate-commands.js +186 -0
  318. package/bin/generate-commands.sh +127 -88
  319. package/bin/lib/init.js +13 -3
  320. package/bin/lib/spawn-logger.js +0 -15
  321. package/bin/lib/update-transaction.js +392 -140
  322. package/bin/npx-install.js +178 -0
  323. package/bin/sync-to-runtime.sh +5 -137
  324. package/bin/validate-package.sh +166 -0
  325. package/package.json +14 -7
  326. package/.opencode/agents/aether-guardian.md +0 -107
  327. package/.opencode/agents/workers.md +0 -1034
  328. package/bin/lib/model-profiles.js +0 -445
  329. package/bin/lib/model-verify.js +0 -288
  330. package/bin/lib/proxy-health.js +0 -253
  331. package/bin/lib/telemetry.js +0 -441
  332. package/runtime/CONTEXT.md +0 -160
  333. package/runtime/QUEEN_ANT_ARCHITECTURE.md +0 -402
  334. package/runtime/aether-utils.sh +0 -3879
  335. package/runtime/data/signatures.json +0 -41
  336. package/runtime/docs/AETHER-2.0-IMPLEMENTATION-PLAN.md +0 -1343
  337. package/runtime/docs/AETHER-PHEROMONE-SYSTEM-MASTER-SPEC.md +0 -2642
  338. package/runtime/docs/PHEROMONE-INJECTION.md +0 -240
  339. package/runtime/docs/PHEROMONE-INTEGRATION.md +0 -192
  340. package/runtime/docs/PHEROMONE-SYSTEM-DESIGN.md +0 -426
  341. package/runtime/docs/README.md +0 -94
  342. package/runtime/docs/VISUAL-OUTPUT-SPEC.md +0 -219
  343. package/runtime/docs/biological-reference.md +0 -272
  344. package/runtime/docs/codebase-review.md +0 -399
  345. package/runtime/docs/command-sync.md +0 -164
  346. package/runtime/docs/constraints.md +0 -116
  347. package/runtime/docs/implementation-learnings.md +0 -89
  348. package/runtime/docs/known-issues.md +0 -217
  349. package/runtime/docs/namespace.md +0 -148
  350. package/runtime/docs/pathogen-schema-example.json +0 -36
  351. package/runtime/docs/pathogen-schema.md +0 -111
  352. package/runtime/docs/planning-discipline.md +0 -159
  353. package/runtime/docs/progressive-disclosure.md +0 -184
  354. package/runtime/lib/queen-utils.sh +0 -729
  355. package/runtime/model-profiles.yaml +0 -100
  356. package/runtime/planning.md +0 -159
  357. package/runtime/recover.sh +0 -136
  358. package/runtime/templates/QUEEN.md.template +0 -79
  359. package/runtime/utils/chamber-utils.sh +0 -285
  360. package/runtime/utils/file-lock.sh +0 -122
  361. package/runtime/utils/spawn-tree.sh +0 -428
  362. package/runtime/utils/spawn-with-model.sh +0 -56
  363. package/runtime/utils/xml-utils.sh +0 -2196
  364. package/runtime/workers-new-castes.md +0 -516
  365. /package/{runtime β†’ .aether/docs/disciplines}/coding-standards.md +0 -0
  366. /package/{runtime β†’ .aether/docs/disciplines}/debugging.md +0 -0
  367. /package/{runtime β†’ .aether/docs/disciplines}/learning.md +0 -0
  368. /package/{runtime β†’ .aether/docs/disciplines}/tdd.md +0 -0
  369. /package/{runtime β†’ .aether/docs/disciplines}/verification-loop.md +0 -0
  370. /package/{runtime β†’ .aether/docs/disciplines}/verification.md +0 -0
  371. /package/{runtime β†’ .aether}/schemas/aether-types.xsd +0 -0
  372. /package/{runtime β†’ .aether}/schemas/colony-registry.xsd +0 -0
  373. /package/{runtime β†’ .aether}/schemas/pheromone.xsd +0 -0
  374. /package/{runtime β†’ .aether}/schemas/prompt.xsd +0 -0
  375. /package/{runtime β†’ .aether}/schemas/queen-wisdom.xsd +0 -0
  376. /package/{runtime β†’ .aether}/schemas/worker-priming.xsd +0 -0
  377. /package/{runtime β†’ .aether}/utils/colorize-log.sh +0 -0
  378. /package/{runtime β†’ .aether}/utils/queen-to-md.xsl +0 -0
@@ -1,17 +1,18 @@
1
+ <!-- Generated from .aether/commands/init.yaml - DO NOT EDIT DIRECTLY -->
1
2
  ---
2
3
  name: ant:init
3
- description: "πŸŒ±πŸœπŸ†•πŸœπŸŒ± Initialize Aether colony - Queen sets intention, colony mobilizes"
4
+ description: "Initialize Aether colony - scan repo, approve charter, create colony"
4
5
  ---
5
6
 
6
- You are the **Queen Ant Colony**. Initialize the colony with the Queen's intention.
7
-
8
- ## Instructions
9
-
10
7
  ### Step -1: Normalize Arguments
11
8
 
12
9
  Run: `normalized_args=$(bash .aether/aether-utils.sh normalize-args "$@")`
13
10
 
14
- This ensures arguments work correctly in both Claude Code and OpenCode.
11
+ This ensures arguments work correctly in both Claude Code and OpenCode. Use `$normalized_args` throughout this command.
12
+
13
+ You are the **Queen Ant Colony**. Initialize the colony with the Queen's intention.
14
+
15
+ ## Instructions
15
16
 
16
17
  The user's goal is: `$normalized_args`
17
18
 
@@ -19,25 +20,42 @@ Parse `$normalized_args`:
19
20
  - If contains `--no-visual`: set `visual_mode = false` (visual is ON by default)
20
21
  - Otherwise: set `visual_mode = true`
21
22
 
23
+
22
24
  Note: Use `$normalized_args` instead of `$ARGUMENTS` throughout this command.
23
25
 
24
26
  ### Step 0: Initialize Visual Mode (if enabled)
25
27
 
26
28
  If `visual_mode` is true:
27
- ```bash
28
- # Generate session ID
29
- init_id="init-$(date +%s)"
30
-
31
- # Initialize swarm display
32
- bash .aether/aether-utils.sh swarm-display-init "$init_id"
33
- bash .aether/aether-utils.sh swarm-display-update "Queen" "prime" "excavating" "Colony initialization" "Colony" '{"read":0,"grep":0,"edit":0,"bash":0}' 0 "fungus_garden" 0
34
- ```
35
-
36
- ### Step 0.5: Version Check (Non-blocking)
37
29
 
38
- Run using the Bash tool: `bash .aether/aether-utils.sh version-check 2>/dev/null || true`
39
30
 
40
- If the command succeeds and the JSON result contains a non-empty string, display it as a one-line notice. Proceed regardless of outcome.
31
+ <failure_modes>
32
+ ### Colony State Overwrite
33
+ Re-init mode detects existing COLONY_STATE.json and preserves all state. Charter content is updated in-place via charter-write. Colony state, wisdom, instincts, learnings, pheromones, and phase progress are never reset.
34
+
35
+ ### Write Failure Mid-Init
36
+ If writing COLONY_STATE.json fails partway:
37
+ - Remove the incomplete file (partial state is worse than no state)
38
+ - Report the error
39
+ - Recovery: user can run /ant:init again safely
40
+ </failure_modes>
41
+
42
+ <success_criteria>
43
+ Command is complete when:
44
+ - User has approved the charter prompt (Charter, Context, Pheromones sections)
45
+ - Charter content is written to QUEEN.md via charter-write
46
+ - COLONY_STATE.json exists and is valid JSON (fresh init only)
47
+ - Session file is written
48
+ - User sees confirmation of colony creation or re-init
49
+ </success_criteria>
50
+
51
+ <read_only>
52
+ Do not touch during init:
53
+ - .aether/dreams/ (user notes)
54
+ - .aether/chambers/ (archived colonies)
55
+ - .env* files
56
+ - .claude/settings.json
57
+ - .github/workflows/
58
+ </read_only>
41
59
 
42
60
  ### Step 1: Validate Input
43
61
 
@@ -46,8 +64,8 @@ If `$normalized_args` is empty or blank, output:
46
64
  ```
47
65
  Aether Colony
48
66
 
49
- Initialize the colony with a goal. This creates the colony state,
50
- initializes constraints, and logs the init event.
67
+ Initialize the colony with a goal. This scans the repo, generates
68
+ a charter for your approval, then creates colony files.
51
69
 
52
70
  Usage: /ant:init "<your goal here>"
53
71
 
@@ -59,213 +77,402 @@ Aether Colony
59
77
 
60
78
  Stop here. Do not proceed.
61
79
 
62
- ### Step 1.5: Bootstrap System Files (Conditional)
80
+ ### Step 1.5: Verify Aether Setup
63
81
 
64
82
  Check if `.aether/aether-utils.sh` exists using the Read tool.
65
83
 
66
- **If the file already exists** β€” skip this step entirely. System files are present.
84
+ **If the file already exists** -- skip this step entirely. Aether is set up.
67
85
 
68
86
  **If the file does NOT exist:**
69
- - Check if `~/.aether/system/` exists (expand `~` to the user's home directory)
70
- - **If the hub exists:** Run using the Bash tool:
71
- ```
72
- bash ~/.aether/system/aether-utils.sh bootstrap-system
73
- ```
74
- This copies system files from the global hub into `.aether/`. Display:
75
- ```
76
- Bootstrapped system files from global hub.
77
- ```
78
- - **If the hub does NOT exist:** Output:
79
- ```
80
- No Aether system files found locally or in ~/.aether/.
81
- Run `aether install` or `npx aether-colony install` to set up the global hub first.
82
- ```
83
- Stop here. Do not proceed.
84
-
85
- ### Step 2: Read Current State
86
-
87
- Use the Read tool to read `.aether/data/COLONY_STATE.json`.
88
-
89
- If the `goal` field is not null, output:
87
+ ```
88
+ Aether is not set up in this repo yet.
90
89
 
90
+ Run /ant:lay-eggs first to create the .aether/ directory
91
+ with all system files, then run /ant:init "your goal" to
92
+ start a colony.
93
+
94
+ If the global hub isn't installed either:
95
+ npm install -g aether-colony (installs the hub)
96
+ /ant:lay-eggs (sets up this repo)
97
+ /ant:init "your goal" (starts the colony)
91
98
  ```
92
- Colony already initialized with goal: "{existing_goal}"
99
+ Stop here. Do not proceed.
100
+
101
+ ### Step 2: Initialize QUEEN.md
102
+
103
+ Run:
104
+ ```
105
+ bash .aether/aether-utils.sh queen-init
106
+ ```
107
+
108
+ Parse the JSON result:
109
+ - If `created` is true: Display `QUEEN.md initialized`
110
+ - If `created` is false and `reason` is "already_exists": Display `QUEEN.md already exists`
111
+
112
+ This step is non-blocking -- proceed regardless of outcome.
93
113
 
94
- To reinitialize with a new goal, the current state will be reset.
95
- Proceeding with new goal: "{new_goal}"
114
+ ### Step 3: Scan Repository
115
+
116
+ Run the scan via Bash tool:
117
+ ```bash
118
+ scan_result=$(bash .aether/aether-utils.sh init-research 2>/dev/null)
119
+ scan_data=$(echo "$scan_result" | jq '.result')
96
120
  ```
97
121
 
98
- ### Step 2.5: Load Prior Colony Knowledge (Optional)
122
+ Extract fields with jq defaults for missing data:
123
+ - `tech_langs`: `.tech_stack.languages | if length > 0 then join(", ") else "not detected" end`
124
+ - `tech_fwks`: `.tech_stack.frameworks | if length > 0 then join(", ") else "none" end`
125
+ - `tech_pkg`: `.tech_stack.package_managers | join(", ")`
126
+ - `complexity`: `.complexity.size`
127
+ - `file_count`: `.complexity.metrics.file_count`
128
+ - `top_dirs`: `.directory_structure.top_level_dirs | if . and length > 0 then join(", ") else "flat" end`
129
+ - `commit_count`: `.git_history.commit_count // "unknown"`
130
+ - `is_git`: `.git_history.is_git_repo // false`
131
+ - `survey_suggestion`: `.survey_status.suggestion.reason // empty`
132
+ - `has_active`: `.prior_colonies.has_active_colony // false`
133
+ - `active_goal`: `.prior_colonies.active_goal // empty`
134
+
135
+ **Intelligence fields (new):**
136
+ - `colony_context_colonies`: `.colony_context.prior_colonies // []` -- array of prior colony summaries (each has goal, phases, outcome, summary)
137
+ - `colony_context_charter`: `.colony_context.existing_charter // {}` -- existing charter content from QUEEN.md
138
+ - `governance_rules`: `.governance.rules // []` -- array of governance rule objects (each has rule, source, strength)
139
+ - `pheromone_suggestions`: `.pheromone_suggestions // []` -- array of suggestion objects (each has type, content, reason, priority)
99
140
 
100
- Check if `.aether/data/completion-report.md` exists using the Read tool.
141
+ If `scan_result` is empty or `jq` fails, set all fields to fallback values (empty arrays/objects for intelligence fields) and proceed (graceful degradation -- never stop init because scan fails).
101
142
 
102
- **If the file does NOT exist**, skip to Step 3 β€” this is a fresh colony with no prior history.
143
+ ### Step 4: Detect Re-Init Mode
103
144
 
104
- **If the file exists**, read it and extract:
105
- 1. **Instincts** β€” look for the `## Colony Instincts` section. Each line has format: `N. [confidence] domain: description`. Keep only instincts with confidence >= 0.5.
106
- 2. **Learnings** β€” look for the `## Colony Learnings (Validated)` section. Keep all numbered items.
145
+ Use Read tool to check `.aether/data/COLONY_STATE.json`.
107
146
 
108
- Store the extracted instincts and learnings for use in Step 3. Display a brief note:
147
+ - If file exists AND has a non-null `goal` field: set `reinit_mode = true`, store `existing_goal`
148
+ - Otherwise: set `reinit_mode = false`
109
149
 
150
+ If re-init mode, read existing charter entries from `.aether/QUEEN.md`:
151
+ ```bash
152
+ existing_intent=$(grep '\[charter\] \*\*Intent\*\*:' .aether/QUEEN.md 2>/dev/null | sed 's/.*\*\*Intent\*\*: //' | sed 's/ (Colony:.*//' || true)
153
+ existing_vision=$(grep '\[charter\] \*\*Vision\*\*:' .aether/QUEEN.md 2>/dev/null | sed 's/.*\*\*Vision\*\*: //' | sed 's/ (Colony:.*//' || true)
154
+ existing_governance=$(grep '\[charter\] \*\*Governance\*\*:' .aether/QUEEN.md 2>/dev/null | sed 's/.*\*\*Governance\*\*: //' | sed 's/ (Colony:.*//' || true)
155
+ existing_goals=$(grep '\[charter\] \*\*Goal\*\*:' .aether/QUEEN.md 2>/dev/null | sed 's/.*\*\*Goal\*\*: //' | sed 's/ (Colony:.*//' || true)
110
156
  ```
111
- 🧠 Prior colony knowledge found:
112
- {N} instinct(s) inherited (confidence >= 0.5)
113
- {N} validated learning(s) carried forward
157
+
158
+ Strip `(Colony: ...)` suffixes using sed. If grep finds nothing, variables remain empty.
159
+
160
+ ### Step 5: Assemble and Display Approval Prompt
161
+
162
+ Display a brief header:
163
+ ```
164
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
165
+ A E T H E R C O L O N Y I N I T
166
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
114
167
  ```
115
168
 
116
- If no instincts meet the threshold, display:
169
+ If re-init mode, display:
117
170
  ```
118
- 🧠 Prior colony knowledge found but no high-confidence instincts to inherit.
171
+ Re-init mode detected (existing goal: "{existing_goal}")
172
+ Charter will be updated. All colony state, wisdom, instincts, and progress will be preserved.
119
173
  ```
120
174
 
121
- **Important:** This step is read-only and non-blocking. If the file is malformed or unreadable, skip silently and proceed to Step 3 with empty memory.
122
-
123
- ### Step 3: Write Colony State
124
-
125
- Generate a session ID in the format `session_{unix_timestamp}_{random}` and an ISO-8601 UTC timestamp.
126
-
127
- Use the Write tool to write `.aether/data/COLONY_STATE.json` with the v3.0 structure.
128
-
129
- **If Step 2.5 found instincts to inherit**, convert each into the instinct format and seed the `memory.instincts` array. Each inherited instinct should have:
130
- - `id`: `instinct_inherited_{index}`
131
- - `trigger`: inferred from the instinct description
132
- - `action`: the instinct description
133
- - `confidence`: the original confidence value (from the completion report)
134
- - `domain`: the original domain (from the completion report)
135
- - `source`: `"inherited:completion-report"`
136
- - `evidence`: `["Validated in prior colony session"]`
137
- - `created_at`: current ISO-8601 timestamp
138
- - `last_applied`: null
139
- - `applications`: 0
140
- - `successes`: 0
141
-
142
- **If Step 2.5 found validated learnings**, seed `memory.phase_learnings` with each as:
143
- - `phase`: `"inherited"`
144
- - `learning`: the learning text
145
- - `status`: `"validated"`
146
- - `source`: `"inherited:completion-report"`
147
-
148
- **If Step 2.5 was skipped or found nothing**, use empty arrays as before.
149
-
150
- ```json
151
- {
152
- "version": "3.0",
153
- "goal": "<the user's goal>",
154
- "state": "READY",
155
- "current_phase": 0,
156
- "session_id": "<generated session_id>",
157
- "initialized_at": "<ISO-8601 timestamp>",
158
- "build_started_at": null,
159
- "plan": {
160
- "generated_at": null,
161
- "confidence": null,
162
- "phases": []
163
- },
164
- "memory": {
165
- "phase_learnings": "<inherited learnings or []>",
166
- "decisions": [],
167
- "instincts": "<inherited instincts or []>"
168
- },
169
- "errors": {
170
- "records": [],
171
- "flagged_patterns": []
172
- },
173
- "signals": [],
174
- "graveyards": [],
175
- "events": [
176
- "<ISO-8601 timestamp>|colony_initialized|init|Colony initialized with goal: <the user's goal>"
177
- ]
178
- }
175
+ Then display the approval prompt as formatted Markdown. Section ordering: Prior Context (if any) -> Charter -> Context -> Pheromones.
176
+
177
+ **Section 1: Prior Context (conditional -- only when prior colonies exist)**
178
+
179
+ If `colony_context_colonies` has entries (length > 0), display:
180
+ ```markdown
181
+ ## Prior Context
182
+
183
+ Previous colonies in this repo:
184
+
185
+ {For each colony (max 3, most recent first):}
186
+ - **{goal}** -- {outcome} ({phases} phases){if summary is non-empty: ". {summary}"}
179
187
  ```
180
188
 
181
- ### Step 4: Initialize Constraints
189
+ Per locked decision: when no prior colonies exist, omit this section entirely. No placeholder, no header.
190
+
191
+ Keep each colony to 1-2 lines. Show goal, outcome (milestone), phase count, and summary from CROWNED-ANTHILL.md if available.
182
192
 
183
- Write `.aether/data/constraints.json`:
193
+ **Section 2: Charter**
194
+ ```markdown
195
+ ## Charter
184
196
 
185
- ```json
186
- {
187
- "version": "1.0",
188
- "focus": [],
189
- "constraints": []
190
- }
197
+ **Intent:** {user's goal from $normalized_args, or existing_intent if re-init}
198
+ **Vision:** {derived from user's goal by Claude, or existing_vision if re-init}
199
+ **Governance:** {see governance logic below}
200
+ **Goals:** {blank for fresh init, or existing_goals if re-init}
191
201
  ```
192
202
 
193
- ### Step 5: Validate State File
203
+ For fresh init, Claude should derive a brief Vision from the user's goal (1-2 sentences). Goals start blank. The user fills them in if desired.
204
+
205
+ **Governance field logic:**
206
+ - For fresh init with `governance_rules` available (length > 0): pre-populate with semicolon-separated rule text from the detected rules. Format: `"TDD required; ESLint enforced; Follow CONTRIBUTING.md"`. These are editable by the user.
207
+ - For fresh init with no governance_rules: leave blank.
208
+ - For re-init with existing_governance non-empty: pre-populate from existing QUEEN.md charter entries.
209
+ - For re-init with existing_governance empty but governance_rules available: pre-populate from governance_rules.
194
210
 
195
- Use the Bash tool to run:
211
+ For re-init, pre-populate Intent, Vision, and Goals from existing QUEEN.md charter entries.
212
+
213
+ **Section 3: Context**
214
+ ```markdown
215
+ ## Context
216
+
217
+ **Tech Stack:** {tech_langs} | {tech_fwks} | {tech_pkg}
218
+ **Project Size:** {complexity} ({file_count} files)
219
+ **Structure:** {top_dirs}
220
+ **Git:** {commit_count} commits
221
+ {if survey_suggestion: **Note:** {survey_suggestion}}
196
222
  ```
197
- bash .aether/aether-utils.sh validate-state colony
223
+
224
+ **Section 4: Pheromones**
225
+
226
+ If `pheromone_suggestions` has entries (length > 0), display:
227
+ ```markdown
228
+ ## Pheromones
229
+
230
+ Suggested signals based on repo analysis:
231
+
232
+ 1. [FOCUS] Testing infrastructure present (47 test files) -- maintain TDD discipline
233
+ 2. [REDIRECT] Environment files detected -- never commit secrets or .env files
234
+ 3. [FOCUS] Code quality tools configured -- follow existing lint/format rules
235
+
236
+ Edit, remove, or add signals as needed. Approved signals will be auto-applied.
198
237
  ```
199
238
 
200
- This validates COLONY_STATE.json structure. If validation fails, output a warning.
239
+ The numbered list uses the actual type and content from `pheromone_suggestions`. Each line format: `{N}. [{type}] {content}`.
201
240
 
202
- ### Step 5.5: Detect Nestmates
241
+ Per locked decision: suggestions are fully editable. User can reword, remove, or add their own.
242
+ Per locked decision: all sections look the same -- no visual distinction between auto-generated and user-written content.
203
243
 
204
- Run using Bash tool: `node -e "const nl = require('./bin/lib/nestmate-loader'); console.log(JSON.stringify(nl.findNestmates(process.cwd())))"`
244
+ If no pheromone suggestions available (empty array), display the existing default:
245
+ ```markdown
246
+ ## Pheromones
205
247
 
206
- If nestmates are found:
207
- 1. Display: `Nestmates found: N related colonies`
208
- 2. List each nestmate with name and truncated goal
209
- 3. Check for shared TO-DOs or cross-project dependencies
248
+ No pheromone suggestions yet -- use /ant:focus and /ant:redirect to guide the colony.
249
+ ```
210
250
 
211
- ### Step 5.6: Register Repo (Silent)
251
+ End with clear instructions:
252
+ ```
253
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
254
+ Review the prompt above. You can:
255
+ - Edit any section (just describe your changes)
256
+ - Say "approve" or "looks good" to proceed
257
+ - Say "cancel" to abort
258
+
259
+ If you don't respond, the colony will not be initialized.
260
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
261
+ ```
262
+
263
+ **STOP HERE.** Wait for the user's response. Do NOT proceed to Step 6 until the user responds.
264
+
265
+ ### Step 6: Handle User Response
266
+
267
+ Parse the user's response:
268
+ - If the user approves (says "approve", "looks good", "yes", "ok", or similar): proceed to Step 7
269
+ - If the user provides edits: apply the edits to the relevant section(s), re-display the full prompt, increment a revision counter, and wait again
270
+ - If the user cancels: display "Colony initialization cancelled." and stop
271
+ - Max 2 revision rounds. After 2 rejections/edits, display: "Maximum revisions reached. Approve current version, or cancel init?" and wait for final decision
272
+
273
+ When applying edits, Claude updates the section content in memory (not files) and re-displays the full prompt. Each re-display includes a revision counter: "(Revision {N}/2)"
212
274
 
213
- Attempt to register this repo in the global hub. Both steps are silent on failure β€” registry is not required for the colony to work.
275
+ ### Step 7: Create Colony (Post-Approval)
214
276
 
215
- Run using the Bash tool (ignore errors):
277
+ Only reached after user approval. ALL file writes happen here.
278
+
279
+ **If re-init mode:**
280
+
281
+ 1. Write charter content via:
282
+ ```bash
283
+ bash .aether/aether-utils.sh charter-write --intent "{approved_intent}" --vision "{approved_vision}" --governance "{approved_governance}" --goals "{approved_goals}"
216
284
  ```
217
- bash .aether/aether-utils.sh registry-add "$(pwd)" "$(jq -r '.version // "unknown"' ~/.aether/version.json 2>/dev/null || echo 'unknown')" 2>/dev/null || true
285
+
286
+ 2. Auto-apply approved pheromone suggestions (see pheromone auto-apply below).
287
+
288
+ 3. Optionally update the goal field in COLONY_STATE.json in-place:
289
+ ```bash
290
+ jq --arg new_goal "{approved_intent}" '.goal = $new_goal' .aether/data/COLONY_STATE.json > .aether/data/COLONY_STATE.json.tmp && mv .aether/data/COLONY_STATE.json.tmp .aether/data/COLONY_STATE.json
218
291
  ```
219
292
 
220
- Then attempt to write `.aether/version.json` with the hub version:
293
+ 4. Run `bash .aether/aether-utils.sh session-init "$(jq -r '.session_id' .aether/data/COLONY_STATE.json)" "{approved_intent}"`
294
+
295
+ 5. Skip to Step 8 (display result). Do NOT write COLONY_STATE.json from template, do NOT write constraints.json, do NOT write pheromones.json.
296
+
297
+ **If fresh init:**
298
+
299
+ 1. Initialize QUEEN.md (already done in Step 2)
300
+ 2. Write charter content via charter-write (same command as above)
301
+ 3. Auto-apply approved pheromone suggestions (see pheromone auto-apply below).
302
+ 4. Write COLONY_STATE.json from template:
303
+ - Generate a session ID in the format `session_{unix_timestamp}_{random}` and an ISO-8601 UTC timestamp
304
+ - Resolve template: check `~/.aether/system/templates/colony-state.template.json` first, then `.aether/templates/colony-state.template.json`
305
+ - If no template found: output "Template missing: colony-state.template.json. Run aether update to fix." and stop
306
+ - Read the template file. Follow its `_instructions` field
307
+ - Replace placeholders: `__GOAL__` with approved intent, `__SESSION_ID__` with generated session ID, `__ISO8601_TIMESTAMP__` with current timestamp, `__PHASE_LEARNINGS__` with `[]`, `__INSTINCTS__` with `[]`
308
+ - Remove ALL keys starting with underscore
309
+ - Write the resulting JSON to `.aether/data/COLONY_STATE.json` using the Write tool
310
+
311
+ 5. Write constraints.json from template:
312
+ - Resolve template: check `~/.aether/system/templates/constraints.template.json` first, then `.aether/templates/constraints.template.json`
313
+ - If no template found: output "Template missing: constraints.template.json. Run aether update to fix." and stop
314
+ - Read template, follow `_instructions`, remove `_` prefixed keys, write to `.aether/data/constraints.json`
315
+
316
+ 6. Initialize runtime files from templates (non-blocking):
317
+ ```bash
318
+ for template in pheromones midden learning-observations; do
319
+ if [[ "$template" == "midden" ]]; then
320
+ target=".aether/data/midden/midden.json"
321
+ else
322
+ target=".aether/data/${template}.json"
323
+ fi
324
+ if [[ ! -f "$target" ]]; then
325
+ template_file=""
326
+ for path in ~/.aether/system/templates/${template}.template.json .aether/templates/${template}.template.json; do
327
+ if [[ -f "$path" ]]; then
328
+ template_file="$path"
329
+ break
330
+ fi
331
+ done
332
+ if [[ -n "$template_file" ]]; then
333
+ jq 'with_entries(select(.key | startswith("_") | not))' "$template_file" > "$target" 2>/dev/null || true
334
+ fi
335
+ fi
336
+ done
221
337
  ```
338
+
339
+ 7. Run `bash .aether/aether-utils.sh context-update init "{approved_intent}"`
340
+ 8. Run `bash .aether/aether-utils.sh validate-state colony`
341
+ 9. Register repo (silent on failure):
342
+ ```bash
343
+ domain_tags=$(bash .aether/aether-utils.sh domain-detect 2>/dev/null | jq -r '.result.tags // ""' || echo "")
344
+ bash .aether/aether-utils.sh registry-add "$(pwd)" "$(jq -r '.version // "unknown"' ~/.aether/version.json 2>/dev/null || echo 'unknown')" --goal "{approved_intent}" --active true --tags "$domain_tags" 2>/dev/null || true
222
345
  cp ~/.aether/version.json .aether/version.json 2>/dev/null || true
223
346
  ```
347
+ 10. Seed QUEEN.md from hive (non-blocking):
348
+ ```bash
349
+ domain_tags=$(jq -r --arg repo "$(pwd)" \
350
+ '[.repos[] | select(.path == $repo) | .domain_tags // []] | .[0] // [] | join(",")' \
351
+ "$HOME/.aether/registry.json" 2>/dev/null || echo "")
352
+ seed_args="queen-seed-from-hive --limit 5"
353
+ [[ -n "$domain_tags" ]] && seed_args="$seed_args --domain $domain_tags"
354
+ seed_result=$(bash .aether/aether-utils.sh $seed_args 2>/dev/null || echo '{}')
355
+ seeded_count=$(echo "$seed_result" | jq -r '.result.seeded // 0' 2>/dev/null || echo "0")
356
+ ```
357
+ 11. Run `bash .aether/aether-utils.sh session-init "{session_id}" "{approved_intent}"`
224
358
 
225
- If either command fails, proceed silently. These are optional bookkeeping.
359
+ **Pheromone auto-apply (referenced by both re-init and fresh init paths above):**
226
360
 
227
- ### Step 6: Display Result
361
+ If approved pheromone suggestions exist (the user kept them in the prompt and didn't remove them during the approval loop):
228
362
 
229
- **If visual_mode is true, render final swarm display:**
363
+ For each approved pheromone suggestion, call:
230
364
  ```bash
231
- bash .aether/aether-utils.sh swarm-display-update "Queen" "prime" "completed" "Colony initialized" "Colony" '{"read":5,"grep":2,"edit":3,"bash":2}' 100 "fungus_garden" 100
232
- bash .aether/aether-utils.sh swarm-display-render "$init_id"
365
+ bash .aether/aether-utils.sh pheromone-write "{type}" '{content}' --source "system:init" --reason '{reason}' --ttl "30d" 2>/dev/null || true
233
366
  ```
234
367
 
235
- Output this header:
368
+ Implementation notes:
369
+ - Claude (the LLM executing init.md) tracks which pheromones the user kept, edited, or removed during the approval loop (Step 6). Only emit pheromones that survived approval.
370
+ - Use single quotes around pheromone content and reason to avoid shell metacharacter issues (per pitfall 4).
371
+ - Each `pheromone-write` call uses `2>/dev/null || true` to make it non-blocking -- a failed write should never stop colony creation.
372
+ - The `--source "system:init"` tag identifies these as init-derived pheromones.
373
+ - The `--ttl "30d"` gives suggestions a 30-day lifespan (project-level conventions, not phase-specific).
374
+ - `pheromone-write` handles deduplication via content hashing -- if a signal with the same content already exists, it will reinforce rather than duplicate.
236
375
 
376
+ ### Step 7.5: Import Previous Colony Data (optional)
377
+
378
+ Check if previous colony chambers contain importable XML data:
379
+
380
+ ```bash
381
+ # Find most recent chamber with XML files (per D-07)
382
+ latest_chamber=$(ls -d .aether/chambers/20* 2>/dev/null | sort -r | head -1)
383
+ xml_import_available=false
384
+ import_summary=""
385
+
386
+ if [[ -n "$latest_chamber" ]]; then
387
+ xml_count=$(find "$latest_chamber" -maxdepth 1 -name "*.xml" ! -name "colony-archive.xml" 2>/dev/null | wc -l | tr -d ' ')
388
+ if [[ "$xml_count" -gt 0 ]] && command -v xmllint >/dev/null 2>&1; then
389
+ xml_import_available=true
390
+ chamber_name=$(basename "$latest_chamber")
391
+ # Count importable items for display
392
+ signal_count=$(jq '.signals | length' "$latest_chamber/pheromones.json" 2>/dev/null || echo "0")
393
+ import_summary="Found ${signal_count} signal(s) and ${xml_count} XML file(s) from colony '${chamber_name}'"
394
+ fi
395
+ fi
237
396
  ```
238
- πŸŒ±πŸœπŸ†•πŸœπŸŒ± ═══════════════════════════════════════════════════
239
- A E T H E R C O L O N Y
240
- ═══════════════════════════════════════════════════ πŸŒ±πŸœπŸ†•πŸœπŸŒ±
397
+
398
+ **If xml_import_available is true:**
399
+
400
+ Display the import offer (per D-08):
241
401
  ```
402
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
403
+ PREVIOUS COLONY DATA FOUND
404
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
242
405
 
243
- Then output the result:
406
+ {import_summary}
244
407
 
408
+ Import signals and wisdom from this colony?
409
+ This will add to (not replace) your current colony data.
410
+
411
+ Import? (yes/no)
245
412
  ```
246
- πŸ‘‘ Queen has set the colony's intention
247
413
 
248
- "{goal}"
414
+ Use `AskUserQuestion` with yes/no options.
415
+
416
+ **If user selects "yes":**
417
+
418
+ Import ALL available data types (per D-09 -- no cherry-picking):
419
+
420
+ ```bash
421
+ # Import pheromones (per D-09)
422
+ if [[ -f "$latest_chamber/pheromones.xml" ]]; then
423
+ pher_import=$(bash .aether/aether-utils.sh pheromone-import-xml "$latest_chamber/pheromones.xml" "imported" 2>/dev/null || echo '{"ok":false}')
424
+ pher_imported=$(echo "$pher_import" | jq -r '.result.imported // 0' 2>/dev/null || echo "0")
425
+ echo "Pheromones: ${pher_imported} signal(s) imported"
426
+ fi
427
+
428
+ # Import wisdom to queen-wisdom.json (per D-09)
429
+ if [[ -f "$latest_chamber/queen-wisdom.xml" ]]; then
430
+ wis_import=$(bash .aether/aether-utils.sh wisdom-import-xml "$latest_chamber/queen-wisdom.xml" ".aether/data/queen-wisdom.json" 2>/dev/null || echo '{"ok":false}')
431
+ wis_imported=$(echo "$wis_import" | jq -r '.result.imported // 0' 2>/dev/null || echo "0")
432
+ echo "Wisdom: ${wis_imported} entries(s) imported to queen-wisdom.json"
433
+ fi
434
+
435
+ # Import registry lineage (per D-09)
436
+ if [[ -f "$latest_chamber/colony-registry.xml" ]]; then
437
+ reg_import=$(bash .aether/aether-utils.sh registry-import-xml "$latest_chamber/colony-registry.xml" 2>/dev/null || echo '{"ok":false}')
438
+ reg_imported=$(echo "$reg_import" | jq -r '.result.imported // 0' 2>/dev/null || echo "0")
439
+ echo "Registry: ${reg_imported} colon(ies) lineage imported"
440
+ fi
441
+ ```
442
+
443
+ All imports are non-blocking -- log warning and continue if any fails.
444
+
445
+ **If user selects "no":**
446
+
447
+ Display "Import skipped. Starting fresh colony." and proceed to Step 8.
448
+
449
+ **If xml_import_available is false (no chambers, no XML, or no xmllint):**
450
+
451
+ Skip silently -- proceed directly to Step 8 without any mention of import (per D-11).
452
+ ### Step 8: Display Result
453
+
454
+ Display the success header and result block:
455
+
456
+ ```
457
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
458
+ A E T H E R C O L O N Y
459
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
249
460
 
250
- 🏠 Colony Status: READY
251
- πŸ“‹ Session: <session_id>
461
+ Queen has set the colony's intention
252
462
 
253
- {If instincts or learnings were inherited from Step 2.5:}
254
- 🧠 Inherited from prior colony:
255
- {N} instinct(s) | {N} learning(s)
256
- {End if}
463
+ "{approved_intent}"
257
464
 
258
- {If nestmates found in Step 5.5:}
259
- 🏘️ Nest Context: {N} sibling colonies detected
260
- Context from related projects will be automatically considered
261
- during planning and execution.
262
- {End if}
465
+ Colony Status: READY
263
466
 
264
- 🐜 The colony awaits your command:
467
+ {If re-init: " Mode: Re-init (charter updated, state preserved)"}
468
+ {If fresh and seeded_count > 0: " Hive wisdom: {seeded_count} cross-colony pattern(s) seeded into QUEEN.md"}
265
469
 
266
- /ant:plan πŸ“‹ Generate project plan
267
- /ant:colonize πŸ—ΊοΈ Analyze existing codebase first
268
- /ant:watch πŸ‘οΈ Set up live visibility
470
+ State persisted -- safe to /clear, then run /ant:plan
269
471
 
270
- πŸ’Ύ State persisted β€” safe to /clear, then run /ant:plan
472
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
473
+ Next Up
474
+ ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
475
+ /ant:plan Generate execution plan
476
+ /ant:status Check colony state
477
+ /ant:focus Set initial focus
271
478
  ```