@zigrivers/scaffold 2.38.1 → 2.44.2

package/README.md

@@ -1,6 +1,6 @@
 # Scaffold
 
-A TypeScript CLI that assembles AI-powered prompts at runtime to guide you from "I have an idea" to working software. Scaffold walks you through 60 structured pipeline steps — organized into 16 phases — plus 7 utility tools, and Claude Code handles the research, planning, and implementation for you.
+A TypeScript CLI that assembles AI-powered prompts at runtime to guide you from "I have an idea" to working software. Scaffold walks you through 60 structured pipeline steps — organized into 16 phases — plus 9 utility tools, and Claude Code handles the research, planning, and implementation for you.
 
 By the end, you'll have a fully planned, standards-documented, implementation-ready project with working code.
 
@@ -586,7 +586,7 @@ You can change methodology mid-pipeline with `scaffold init --methodology <prese
 | `scaffold skip <step> [<step2>...]` | Skip one or more steps with a reason |
 | `scaffold complete <step>` | Mark a step as completed (for steps executed outside `scaffold run`) |
 | `scaffold reset <step>` | Reset a step back to pending |
-| `scaffold status [--compact]` | Show pipeline progress (`--compact` shows only remaining work) |
+| `scaffold status [--compact]` | Show pipeline progress (`--compact` shows only remaining work). Warns if commands are stale. |
 | `scaffold next` | List next unblocked step(s) |
 | `scaffold check <step>` | Check if a conditional step applies to this project |
 | `scaffold validate` | Validate meta-prompts, config, state, and dependency graph |
@@ -686,7 +686,7 @@ These are stateless pipeline steps — they appear in `scaffold next` once Phase
 
 ### Utility Tools
 
-These are orthogonal to the pipeline — usable at any time, not tied to pipeline state. Defined in `tools/` with `category: tool` frontmatter:
+These are orthogonal to the pipeline — usable at any time, not tied to pipeline state. Defined in `tools/` with `category: tool` frontmatter. Run `scaffold list --section tools` for a complete listing (or `--verbose` for argument hints, `--format json` for machine-readable output):
 
 | Command | When to Use |
 |---------|-------------|
@@ -696,6 +696,8 @@ These are orthogonal to the pipeline — usable at any time, not tied to pipelin
 | `scaffold run update` | Update Scaffold to the latest version. |
 | `scaffold run dashboard` | Open a visual progress dashboard in your browser. |
 | `scaffold run prompt-pipeline` | Print the full pipeline reference table. |
+| `scaffold run review-pr` | Run all 3 code review channels (Codex CLI, Gemini CLI, Superpowers) on a PR. |
+| `scaffold run post-implementation-review` | Full 3-channel codebase review after an AI agent completes all tasks — checks requirements coverage, security, architecture alignment, and more. |
 | `scaffold run session-analyzer` | Analyze Claude Code session logs for patterns and insights. |
 
 All of these are also available as slash commands (`/scaffold:release`, `/scaffold:quick-task`, etc.) when the plugin is installed.
@@ -831,10 +833,10 @@ src/
 
 ```
 pipeline/             # 60 meta-prompts organized by 16 phases (phases 0-15, including build)
-tools/                # 7 tool meta-prompts (stateless, category: tool)
-knowledge/            # 60 domain expertise entries (core, product, review, validation, finalization, execution, tools)
+tools/                # 9 tool meta-prompts (stateless, category: tool)
+knowledge/            # 61 domain expertise entries (core, product, review, validation, finalization, execution, tools)
 methodology/          # 3 YAML presets (deep, mvp, custom)
-commands/             # 80 Claude Code slash commands (60 pipeline + 13 build-phase + 7 tools)
+commands/             # 72 Claude Code slash commands (60 pipeline + 9 tools + 3 supplemental)
 skills/               # 3 Claude Code skills (pipeline reference, runner, multi-model dispatch)
 ```
 
@@ -850,10 +852,11 @@ skills/               # 3 Claude Code skills (pipeline reference, runner, multi-
 ### Contributing
 
 1. Meta-prompt content lives in `pipeline/` — edit the relevant `.md` file
-2. Run `scaffold build` to regenerate `commands/` from pipeline meta-prompts
+2. Run `scaffold build` to regenerate `commands/` from pipeline meta-prompts. The pre-commit hook will block commits that change `pipeline/` or `knowledge/` without also updating `commands/`.
 3. Run `make check-all` (lint + type-check + test + evals) before submitting
 4. Knowledge entries live in `knowledge/` — follow the existing frontmatter schema
 5. ADRs documenting architectural decisions are in `docs/v2/adrs/`
+6. Run `make hooks` to install git hooks (ShellCheck, frontmatter validation, stale command detection)
 
 ## License
 

package/dist/cli/commands/build.js

@@ -4,7 +4,7 @@ import { resolveOutputMode } from '../middleware/output-mode.js';
 import { createOutputContext } from '../output/context.js';
 import { loadConfig } from '../../config/loader.js';
 import { discoverAllMetaPrompts } from '../../core/assembly/meta-prompt-loader.js';
-import { getPackagePipelineDir, getPackageMethodologyDir, getPackageKnowledgeDir, getPackageToolsDir, } from '../../utils/fs.js';
+import { getPackagePipelineDir, getPackageMethodologyDir, getPackageKnowledgeDir, getPackageToolsDir, atomicWriteFile, } from '../../utils/fs.js';
 import { loadAllPresets } from '../../core/assembly/preset-loader.js';
 import { buildGraph } from '../../core/dependency/graph.js';
 import { detectCycles, topologicalSort } from '../../core/dependency/dependency.js';
@@ -60,8 +60,8 @@ const buildCommand = {
             const methodologyDir = getPackageMethodologyDir(projectRoot);
             loadAllPresets(methodologyDir, stepNames);
         }
-        catch {
-            // No presets available — continue without them
+        catch (err) {
+            process.stderr.write(`[scaffold] Warning: could not load methodology presets: ${err.message}\n`);
         }
         // Step 5: Build dependency graph
         const graph = buildGraph([...metaPrompts.values()].map(m => m.frontmatter), new Map());
@@ -160,7 +160,7 @@ const buildCommand = {
             if (!fs.existsSync(dir)) {
                 fs.mkdirSync(dir, { recursive: true });
             }
-            fs.writeFileSync(fullPath, file.content, 'utf8');
+            atomicWriteFile(fullPath, file.content);
             generatedCount++;
         }
         // Step 13: Report build stats

package/dist/cli/commands/build.js.map

@@ -1 +1 @@
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package/dist/cli/commands/check.test.js

@@ -83,7 +83,10 @@ describe('check command', () => {
             writtenLines.push(String(chunk));
             return true;
         });
-        vi.spyOn(process.stderr, 'write').mockImplementation(() => true);
+        vi.spyOn(process.stderr, 'write').mockImplementation((chunk) => {
+            writtenLines.push(String(chunk));
+            return true;
+        });
         mockResolveOutputMode.mockReturnValue('interactive');
         mockFindProjectRoot.mockReturnValue('/fake/project');
         mockFindClosestMatch.mockReturnValue(null);
@@ -270,10 +273,10 @@ describe('check command', () => {
     it('detects automated-pr-review as applicable when GitHub remote exists', async () => {
         const dir = makeTmpProject();
         tmpDirs.push(dir);
-        // Init a git repo with a GitHub remote
+        // Init a git repo with a GitHub remote (stdio: 'pipe' prevents git hint messages from polluting the spy)
         const { execSync } = await import('node:child_process');
-        execSync('git init', { cwd: dir });
-        execSync('git remote add origin https://github.com/test/repo.git', { cwd: dir });
+        execSync('git init', { cwd: dir, stdio: 'pipe' });
+        execSync('git remote add origin https://github.com/test/repo.git', { cwd: dir, stdio: 'pipe' });
         fs.mkdirSync(path.join(dir, '.github', 'workflows'), { recursive: true });
         mockFindProjectRoot.mockReturnValue(dir);
         mockDiscoverMetaPrompts.mockReturnValue(new Map([
@@ -294,9 +297,9 @@ describe('check command', () => {
     it('detects automated-pr-review as not applicable without GitHub remote', async () => {
         const dir = makeTmpProject();
         tmpDirs.push(dir);
-        // Init a git repo with NO GitHub remote
+        // Init a git repo with NO GitHub remote (stdio: 'pipe' prevents git hint messages from polluting the spy)
         const { execSync } = await import('node:child_process');
-        execSync('git init', { cwd: dir });
+        execSync('git init', { cwd: dir, stdio: 'pipe' });
         mockFindProjectRoot.mockReturnValue(dir);
         mockDiscoverMetaPrompts.mockReturnValue(new Map([
             ['automated-pr-review', makeMetaPrompt('automated-pr-review', 'if-needed')],
@@ -314,8 +317,8 @@ describe('check command', () => {
         const dir = makeTmpProject();
         tmpDirs.push(dir);
         const { execSync } = await import('node:child_process');
-        execSync('git init', { cwd: dir });
-        execSync('git remote add origin https://github.com/test/repo.git', { cwd: dir });
+        execSync('git init', { cwd: dir, stdio: 'pipe' });
+        execSync('git remote add origin https://github.com/test/repo.git', { cwd: dir, stdio: 'pipe' });
         fs.writeFileSync(path.join(dir, 'AGENTS.md'), '# Code Review Instructions');
         mockFindProjectRoot.mockReturnValue(dir);
         mockDiscoverMetaPrompts.mockReturnValue(new Map([

package/dist/cli/commands/check.test.js.map

@@ -1 +1 @@
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package/dist/cli/commands/complete.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"complete.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/complete.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,OAAO,CAAA;AAQ1C,UAAU,YAAY;IACpB,IAAI,EAAE,MAAM,CAAA;IACZ,MAAM,CAAC,EAAE,MAAM,CAAA;IACf,IAAI,CAAC,EAAE,OAAO,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,IAAI,CAAC,EAAE,MAAM,CAAA;IACb,KAAK,CAAC,EAAE,OAAO,CAAA;CAChB;AAED,QAAA,MAAM,eAAe,EAAE,aAAa,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,YAAY,CAqGzE,CAAA;AAED,eAAe,eAAe,CAAA"}
+{"version":3,"file":"complete.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/complete.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,OAAO,CAAA;AAS1C,UAAU,YAAY;IACpB,IAAI,EAAE,MAAM,CAAA;IACZ,MAAM,CAAC,EAAE,MAAM,CAAA;IACf,IAAI,CAAC,EAAE,OAAO,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,IAAI,CAAC,EAAE,MAAM,CAAA;IACb,KAAK,CAAC,EAAE,OAAO,CAAA;CAChB;AAED,QAAA,MAAM,eAAe,EAAE,aAAa,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,YAAY,CAqGzE,CAAA;AAED,eAAe,eAAe,CAAA"}

package/dist/cli/commands/complete.js

@@ -4,6 +4,7 @@ import { createOutputContext } from '../output/context.js';
 import { StateManager } from '../../state/state-manager.js';
 import { acquireLock, releaseLock } from '../../state/lock-manager.js';
 import { findClosestMatch } from '../../utils/levenshtein.js';
+import { buildComputeEligibleFn } from '../../utils/eligible.js';
 const completeCommand = {
     command: 'complete <step>',
     describe: 'Mark a step as completed (for steps executed outside scaffold run)',
@@ -36,7 +37,7 @@ const completeCommand = {
             return;
         }
         try {
-            const stateManager = new StateManager(projectRoot, () => []);
+            const stateManager = new StateManager(projectRoot, buildComputeEligibleFn(projectRoot));
             const state = stateManager.loadState();
             // Check step exists in state
             if (!(argv.step in state.steps)) {

package/dist/cli/commands/complete.js.map

@@ -1 +1 @@
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+{"version":3,"file":"complete.js","sourceRoot":"","sources":["../../../src/cli/commands/complete.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAA;AAC/D,OAAO,EAAE,iBAAiB,EAAE,MAAM,8BAA8B,CAAA;AAChE,OAAO,EAAE,mBAAmB,EAAE,MAAM,sBAAsB,CAAA;AAC1D,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAA;AAC3D,OAAO,EAAE,WAAW,EAAE,WAAW,EAAE,MAAM,6BAA6B,CAAA;AACtE,OAAO,EAAE,gBAAgB,EAAE,MAAM,4BAA4B,CAAA;AAC7D,OAAO,EAAE,sBAAsB,EAAE,MAAM,yBAAyB,CAAA;AAWhE,MAAM,eAAe,GAAyD;IAC5E,OAAO,EAAE,iBAAiB;IAC1B,QAAQ,EAAE,oEAAoE;IAC9E,OAAO,EAAE,CAAC,KAAK,EAAE,EAAE;QACjB,OAAO,KAAK,CAAC,UAAU,CAAC,MAAM,EAAE;YAC9B,IAAI,EAAE,QAAQ;YACd,WAAW,EAAE,gCAAgC;YAC7C,YAAY,EAAE,IAAI;SACnB,CAAC,CAAA;IACJ,CAAC;IACD,OAAO,EAAE,KAAK,EAAE,IAAI,EAAE,EAAE;QACtB,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,IAAI,eAAe,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC,CAAA;QAC/D,IAAI,CAAC,WAAW,EAAE,CAAC;YACjB,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,yEAAyE,CAAC,CAAA;YAC/F,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;YACf,OAAM;QACR,CAAC;QAED,MAAM,UAAU,GAAG,iBAAiB,CAAC,IAAI,CAAC,CAAA;QAC1C,MAAM,MAAM,GAAG,mBAAmB,CAAC,UAAU,CAAC,CAAA;QAE9C,eAAe;QACf,MAAM,UAAU,GAAG,WAAW,CAAC,WAAW,EAAE,UAAU,EAAE,IAAI,CAAC,IAAI,CAAC,CAAA;QAClE,IAAI,CAAC,UAAU,CAAC,QAAQ,IAAI,CAAC,IAAI,CAAC,KAAK,EAAE,CAAC;YACxC,IAAI,UAAU,CAAC,KAAK,EAAE,CAAC;gBACrB,MAAM,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,KAAK,CAAC,IAAI,KAAK,UAAU,CAAC,KAAK,CAAC,OAAO,EAAE,CAAC,CAAA;YACtE,CAAC;iBAAM,CAAC;gBACN,MAAM,CAAC,IAAI,CAAC,iCAAiC,CAAC,CAAA;YAChD,CAAC;YACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;YACf,OAAM;QACR,CAAC;QAED,IAAI,CAAC;YACH,MAAM,YAAY,GAAG,IAAI,YAAY,CAAC,WAAW,EAAE,sBAAsB,CAAC,WAAW,CAAC,CAAC,CAAA;YACvF,MAAM,KAAK,GAAG,YAAY,CAAC,SAAS,EAAE,CAAA;YAEtC,6BAA6B;YAC7B,IAAI,CAAC,CAAC,IAAI,CAAC,IAAI,IAAI,KAAK,CAAC,KAAK,CAAC,EAAE,CAAC;gBAChC,MAAM,UAAU,GAAG,gBAAgB,CAAC,IAAI,CAAC,IAAI,EAAE,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC,CAAA;gBACxE,MAAM,GAAG,GAAG,UAAU;oBACpB,CAAC,CAAC,SAAS,IAAI,CAAC,IAAI,8BAA8B,UAAU,IAAI;oBAChE,CAAC,CAAC,SAAS,IAAI,CAAC,IAAI,aAAa,CAAA;gBACnC,MAAM,CAAC,KAAK,CAAC;oBACX,IAAI,EAAE,oBAAoB;oBAC1B,OAAO,EAAE,GAAG;oBACZ,QAAQ,EAAE,CAAC;oBACX,QAAQ,EAAE,4CAA4C;iBACvD,CAAC,CAAA;gBACF,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;gBACf,OAAM;YACR,CAAC;YAED,MAAM,SAAS,GAAG,KAAK,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;YAExC,8CAA8C;YAC9C,IAAI,SAAS,CAAC,MAAM,KAAK,WAAW,EAAE,CAAC;gBACrC,IAAI,UAAU,KAAK,MAAM,EAAE,CAAC;oBAC1B,MAAM,CAAC,MAAM,CAAC,EAAE,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,IAAI,EAAE,CAAC,CAAA;gBACjF,CAAC;qBAAM,CAAC;oBACN,MAAM,CAAC,IAAI,CAAC,SAAS,IAAI,CAAC,IAAI,wBAAwB,CAAC,CAAA;gBACzD,CAAC;gBACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;gBACf,OAAM;YACR,CAAC;YAED,MAAM,cAAc,GAAG,SAAS,CAAC,MAAM,CAAA;YAEvC,oBAAoB;YACpB,KAAK,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG;gBACvB,MAAM,EAAE,WAAW;gBACnB,MAAM,EAAE,SAAS,CAAC,MAAM,IAAI,UAAU;gBACtC,QAAQ,EAAE,SAAS,CAAC,QAAQ,IAAI,EAAE;gBAClC,EAAE,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;gBAC5B,YAAY,EAAE,MAAM;aACrB,CAAA;YAED,+CAA+C;YAC/C,IAAI,KAAK,CAAC,WAAW,EAAE,IAAI,KAAK,IAAI,CAAC,IAAI,EAAE,CAAC;gBAC1C,KAAK,CAAC,WAAW,GAAG,IAAI,CAAA;YAC1B,CAAC;YAED,YAAY,CAAC,SAAS,CAAC,KAAK,CAAC,CAAA;YAE7B,IAAI,UAAU,KAAK,MAAM,EAAE,CAAC;gBAC1B,MAAM,CAAC,MAAM,CAAC;oBACZ,IAAI,EAAE,IAAI,CAAC,IAAI;oBACf,cAAc;oBACd,SAAS,EAAE,WAAW;iBACvB,CAAC,CAAA;YACJ,CAAC;iBAAM,CAAC;gBACN,MAAM,CAAC,OAAO,CAAC,SAAS,IAAI,CAAC,IAAI,8BAA8B,cAAc,GAAG,CAAC,CAAA;gBACjF,MAAM,CAAC,IAAI,CAAC,2CAA2C,CAAC,CAAA;YAC1D,CAAC;YACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;QACjB,CAAC;gBAAS,CAAC;YACT,IAAI,UAAU,CAAC,QAAQ,EAAE,CAAC;gBACxB,WAAW,CAAC,WAAW,CAAC,CAAA;YAC1B,CAAC;QACH,CAAC;IACH,CAAC;CACF,CAAA;AAED,eAAe,eAAe,CAAA"}

package/dist/cli/commands/complete.test.js

@@ -40,7 +40,10 @@ describe('complete command', () => {
             writtenLines.push(String(chunk));
             return true;
         });
-        vi.spyOn(process.stderr, 'write').mockImplementation(() => true);
+        vi.spyOn(process.stderr, 'write').mockImplementation((chunk) => {
+            writtenLines.push(String(chunk));
+            return true;
+        });
         mockFindProjectRoot.mockReturnValue(tempDir);
         mockResolveOutputMode.mockReturnValue('auto');
     });

package/dist/cli/commands/complete.test.js.map

@@ -1 +1 @@
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package/dist/cli/commands/dashboard.js

@@ -1,7 +1,7 @@
 import fs from 'node:fs';
 import os from 'node:os';
 import path from 'node:path';
-import { execSync } from 'node:child_process';
+import { execFileSync } from 'node:child_process';
 import { findProjectRoot } from '../middleware/project-root.js';
 import { resolveOutputMode } from '../middleware/output-mode.js';
 import { createOutputContext } from '../output/context.js';
@@ -10,7 +10,7 @@ import { readDecisions } from '../../state/decision-logger.js';
 import { loadConfig } from '../../config/loader.js';
 import { generateDashboardData, generateHtml } from '../../dashboard/generator.js';
 import { discoverMetaPrompts } from '../../core/assembly/meta-prompt-loader.js';
-import { getPackagePipelineDir } from '../../utils/fs.js';
+import { getPackagePipelineDir, atomicWriteFile } from '../../utils/fs.js';
 const dashboardCommand = {
     command: 'dashboard',
     describe: 'Open pipeline dashboard in browser',
@@ -82,7 +82,7 @@ const dashboardCommand = {
         const outputPath = argv.output ?? path.join(os.tmpdir(), `scaffold-dashboard-${Date.now()}.html`);
         // 11. Create parent directory if needed and write file
         fs.mkdirSync(path.dirname(outputPath), { recursive: true });
-        fs.writeFileSync(outputPath, html, 'utf8');
+        atomicWriteFile(outputPath, html);
         // 12. Open in browser (unless --no-open)
         if (!argv['no-open']) {
             let opener = 'xdg-open';
@@ -91,7 +91,7 @@ const dashboardCommand = {
             if (process.platform === 'win32')
                 opener = 'start';
             try {
-                execSync(`${opener} "${outputPath}"`);
+                execFileSync(opener, [outputPath]);
             }
             catch {
                 // Ignore errors when opening browser

package/dist/cli/commands/dashboard.js.map

@@ -1 +1 @@
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package/dist/cli/commands/knowledge.js

@@ -1,6 +1,6 @@
 import path from 'node:path';
 import fs from 'node:fs';
-import { execSync } from 'node:child_process';
+import { execSync, execFileSync } from 'node:child_process';
 import { findProjectRoot } from '../middleware/project-root.js';
 import { resolveOutputMode } from '../middleware/output-mode.js';
 import { createOutputContext } from '../output/context.js';
@@ -148,7 +148,7 @@ const resetSubcommand = {
         let hasUncommittedChanges = false;
         if (isGitRepo) {
             try {
-                const result = execSync(`git status --porcelain "${localPath}"`, { stdio: 'pipe', cwd: projectRoot });
+                const result = execFileSync('git', ['status', '--porcelain', localPath], { stdio: 'pipe', cwd: projectRoot });
                 hasUncommittedChanges = result.toString().trim().length > 0;
             }
             catch {

package/dist/cli/commands/knowledge.js.map

@@ -1 +1 @@
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package/dist/cli/commands/knowledge.test.js

@@ -21,6 +21,7 @@ vi.mock('../../config/loader.js', () => ({
 }));
 vi.mock('node:child_process', () => ({
     execSync: vi.fn(),
+    execFileSync: vi.fn(),
 }));
 vi.mock('../../core/assembly/meta-prompt-loader.js', () => ({
     discoverMetaPrompts: vi.fn(),
@@ -37,7 +38,7 @@ import { createOutputContext } from '../../cli/output/context.js';
 import { resolveOutputMode } from '../../cli/middleware/output-mode.js';
 import { loadConfig } from '../../config/loader.js';
 import { runCli } from '../../cli/index.js';
-import { execSync } from 'node:child_process';
+import { execSync, execFileSync } from 'node:child_process';
 import { discoverMetaPrompts } from '../../core/assembly/meta-prompt-loader.js';
 import { KnowledgeUpdateAssembler } from '../../core/knowledge/knowledge-update-assembler.js';
 const PROJECT_ROOT = '/fake/project';
@@ -173,7 +174,7 @@ describe('scaffold knowledge reset', () => {
         const output = setupDefaults();
         const localPath = '/fake/project/.scaffold/knowledge/api-design.md';
         vi.mocked(buildIndex).mockReturnValueOnce(new Map([['api-design', localPath]]));
-        vi.mocked(execSync).mockReturnValue(Buffer.from('')); // empty = no changes
+        vi.mocked(execFileSync).mockReturnValue(Buffer.from('')); // empty = no changes
         await runCli(['knowledge', 'reset', 'api-design']);
         expect(vi.mocked(fs.unlinkSync)).toHaveBeenCalledWith(localPath);
         expect(vi.mocked(output.success)).toHaveBeenCalled();
@@ -182,11 +183,7 @@ describe('scaffold knowledge reset', () => {
         setupDefaults();
         const localPath = '/fake/project/.scaffold/knowledge/api-design.md';
         vi.mocked(buildIndex).mockReturnValueOnce(new Map([['api-design', localPath]]));
-        vi.mocked(execSync).mockImplementation((cmd) => {
-            if (String(cmd).includes('status'))
-                return Buffer.from(' M .scaffold/knowledge/api-design.md');
-            return Buffer.from('');
-        });
+        vi.mocked(execFileSync).mockReturnValue(Buffer.from(' M .scaffold/knowledge/api-design.md'));
         const exitSpy = vi.spyOn(process, 'exit').mockImplementation((() => undefined));
         await runCli(['knowledge', 'reset', 'api-design']);
         expect(exitSpy).toHaveBeenCalledWith(1);
@@ -196,11 +193,7 @@ describe('scaffold knowledge reset', () => {
         setupDefaults();
         const localPath = '/fake/project/.scaffold/knowledge/api-design.md';
         vi.mocked(buildIndex).mockReturnValueOnce(new Map([['api-design', localPath]]));
-        vi.mocked(execSync).mockImplementation((cmd) => {
-            if (String(cmd).includes('status'))
-                return Buffer.from(' M .scaffold/knowledge/api-design.md');
-            return Buffer.from('');
-        });
+        vi.mocked(execFileSync).mockReturnValue(Buffer.from(' M .scaffold/knowledge/api-design.md'));
         await runCli(['knowledge', 'reset', 'api-design', '--auto']);
         expect(vi.mocked(fs.unlinkSync)).toHaveBeenCalledWith(localPath);
     });