@younndai/lyt 0.9.0

package/dist/flows/init-bootstrap.js

@@ -0,0 +1,561 @@
+/*
+ * Copyright 2026 MARLINK TRADING SRL (YounndAI)
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+// v1.B.4 — `lyt init` bootstrap flow.
+//
+// Composes existing sub-flows from @younndai/lyt-vault (meshInitFlow,
+// federationInitFlow) into an idempotent + re-runnable bootstrap with
+// three branches selected by local-state probe + the --discover flag.
+//
+// Source: lyt-master-plan §v1.B.4:538-557 + lyt-federation-design.md
+// §5:209-241 (probe order + branch table) + brief
+// 2026-05-31-v1-b-4-lyt-init-bootstrap.md.
+//
+// Branch decision (per federation-design §5 + brief OD-7):
+// 1. mode === 'discover' (set by --discover flag) → DISCOVERY
+// 2. meshes count == 0 && vaults count == 0 → FRESH
+// 3. otherwise (registry has ≥1 mesh OR ≥1 vault) → RE-INIT
+//
+// Lives in the meta package (`packages/lyt/src/flows/`) — composing
+// flows from lyt-vault here would create a logical inversion (lyt-vault
+// would depend on its own composition). The meta package is the
+// natural composer; this flow file is the FIRST member of packages/lyt's
+// flows/ directory.
+//
+// Open-once `registryDb?` seam from line 1 per v1.A.5 CR-B1 (10th
+// application across v1.A.5 → v1.D.* → v1.B.* lineage).
+import { existsSync, readFileSync } from "node:fs";
+import { adoptAndPrimeFlow, backfillFigmentCaches, closeRegistry, deriveProvisionalHandle, federationInitFlow, federationRepoName, getHandleFromIdentity, getMeshByRid, isProvisionalIdentity, isValidGhHandle, listMeshes, listVaults, meshInitFlow, openRegistry, parseVaultYon, readIdentityCache, realFederationGhClient, regeneratePodManifestNonFatal, writeProvisionalIdentity, } from "@younndai/lyt-vault";
+// v1.G.13 Gap 1 — fresh-state probe exposed for the meta CLI's no-flag
+// wizard auto-route. Reuses the SAME predicate that initBootstrapFlow's
+// internal branch decision uses (line 158): meshes.length === 0 && vaults
+// .length === 0 → fresh. Lifting it as a public helper avoids duplicating
+// the detector in init.ts per project rule #9.
+export async function probeFreshState(registryDb) {
+    const ownDb = registryDb === undefined;
+    const db = registryDb ?? (await openRegistry());
+    try {
+        const meshes = await listMeshes(db);
+        const vaults = await listVaults(db);
+        return meshes.length === 0 && vaults.length === 0;
+    }
+    finally {
+        if (ownDb)
+            await closeRegistry(db);
+    }
+}
+// MF1 (V-A-11) — shared PROVISIONAL-cache test (read-only, no side effects). True
+// when the identity cache is provisional: this machine inited LOCAL-ONLY (gh
+// absent/unauthed) before. This predicate unifies the `isProvisionalIdentity` CHECK
+// across the three sites (adopt router, doFreshBranch, init.ts isLocalFirstContext)
+// — but each site COMPOSES it differently, and that is INTENTIONAL (a review finding): the
+// router gates on this ALONE (any provisional cache ⇒ never auto-adopt,
+// handle-agnostic — the safer default), while doFreshBranch ALSO requires
+// `cached.handle === handle` before going local-only. So the provisional TEST
+// cannot drift; the surrounding local-first DECISION is deliberately per-site.
+// Returns false on a null / non-provisional (gh-cli) cache.
+export function resolveLocalFirst(cached) {
+    return cached !== null && isProvisionalIdentity(cached);
+}
+// V-A-11 / MF1 — decide whether a FRESH-state init should ADOPT a remote pod
+// (clone its content) instead of scaffolding an empty fresh pod. Returns the
+// handle to adopt under, or null to fall through to `fresh`.
+//
+// Resilience-core (MF1): the gh probe is GUARDED. `repoExists` returns false ONLY
+// on HTTP 404 and THROWS on everything else (no-gh ENOENT, auth, network, 5xx —
+// gh-federation.ts:289-294). Any throw degrades to null (→ fresh), so a transient
+// gh failure NEVER aborts the common fresh init. A provisional local-first cache
+// short-circuits BEFORE any probe (a returning local-first user is never gh-probed).
+async function probeAdoptable(args) {
+    // Gate: a provisional identity cache ⇒ local-first returner ⇒ never probe.
+    if (resolveLocalFirst(readIdentityCache()))
+        return null;
+    // Resolve the handle (explicit override → identity → null/gh-less ⇒ fresh).
+    const handle = args.handle ?? safeIdentityResolve();
+    if (handle === null)
+        return null;
+    // a review finding (release review fix-pass) — defense-in-depth: NEVER reach a `gh` spawn with
+    // a handle that isn't a valid GitHub username. The handle can come from a
+    // hand-editable identity cache / LYT_IDENTITY_OVERRIDE; repoExists interpolates it
+    // into `gh api /repos/${handle}/lyt-pod`, so a `/`-bearing or metachar handle could
+    // reshape the endpoint (or hit the Windows .cmd shell fallback). Mirror the
+    // pre-spawn guard every sibling caller enforces (federationInitFlow,
+    // recoverVaultsFromPodManifest, the engine's gh-walk). Invalid ⇒ not-adoptable ⇒ fresh.
+    if (!isValidGhHandle(handle))
+        return null;
+    // Probe the remote pod, GUARDED — reuse the SAME federationGhClient detection
+    // federationInitFlow uses internally (so router + flow cannot disagree).
+    const ghClient = args.federationGhClient ?? realFederationGhClient;
+    try {
+        const exists = await ghClient.repoExists(handle, federationRepoName());
+        return exists ? handle : null;
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        // eslint-disable-next-line no-console
+        console.error(`lyt init: pod-exists probe failed non-fatally — ${msg}. Proceeding with a fresh init.`);
+        return null;
+    }
+}
+export async function initBootstrapFlow(args) {
+    const startedAtMs = nowMs(args.nowIso);
+    const ownDb = args.registryDb === undefined;
+    const db = args.registryDb ?? (await openRegistry());
+    try {
+        // Probe local state ONCE up front.
+        const meshes = await listMeshes(db);
+        const vaults = await listVaults(db);
+        // Branch decision (federation-design §5 + brief OD-7; V-A-11 adds ADOPT).
+        let branch;
+        let adoptHandle = null;
+        if (args.mode === "discover") {
+            branch = "discovery";
+        }
+        else if (meshes.length === 0 && vaults.length === 0) {
+            // V-A-11 — a FRESH registry prefers ADOPT when a remote `{handle}/lyt-pod`
+            // exists (clone its content), else scaffolds a FRESH pod. probeAdoptable is
+            // GUARDED (gh flake / no-gh / provisional-local-first → null → fresh), so it
+            // never aborts the common fresh path (MF1, SC3/SC7).
+            adoptHandle = await probeAdoptable(args);
+            branch = adoptHandle !== null ? "adopt" : "fresh";
+        }
+        else {
+            branch = "re-init";
+        }
+        if (branch === "adopt") {
+            // adoptHandle is non-null here (branch was set from it).
+            const result = await doAdoptBranch(args, db, adoptHandle);
+            // a review finding — on adopt failure surface it cleanly: no heal/materialize, the
+            // command layer renders the actionable error + sets a non-zero exit.
+            if (result.adoptError !== undefined) {
+                return finalize({ ...result, branch }, startedAtMs, args.nowIso);
+            }
+            // New machine cloning a pod still wants its skills + agent-manuals aligned,
+            // so run heal (parity with fresh + the interactive wizard). The flow already
+            // ran healPatterns (idempotent, version-gated) — the patterns subset double
+            // is a near-noop. Do NOT materialize: adopt clones EXISTING remotes; a
+            // materialize-publish would try to forge/commit remotes for already-remote
+            // vaults (wrong for adopt + would touch the push surface).
+            const heal = await runHealIfProvided(args);
+            return finalize({
+                ...result,
+                branch,
+                ...(heal !== null ? { heal } : {}),
+            }, startedAtMs, args.nowIso);
+        }
+        if (branch === "fresh") {
+            const result = await doFreshBranch(args, db);
+            const heal = await runHealIfProvided(args);
+            const publish = await runMaterializeIfProvided(args, db);
+            return finalize({
+                ...result,
+                branch,
+                ...(heal !== null ? { heal } : {}),
+                ...(publish !== null ? { publish } : {}),
+            }, startedAtMs, args.nowIso);
+        }
+        if (branch === "re-init") {
+            const result = await doReInitBranch(args, db);
+            const heal = await runHealIfProvided(args);
+            const publish = await runMaterializeIfProvided(args, db);
+            return finalize({
+                ...result,
+                branch,
+                ...(heal !== null ? { heal } : {}),
+                ...(publish !== null ? { publish } : {}),
+            }, startedAtMs, args.nowIso);
+        }
+        // DISCOVERY — read-only; never heals.
+        const result = await doDiscoveryBranch(args, db, meshes);
+        return finalize({ ...result, branch }, startedAtMs, args.nowIso);
+    }
+    finally {
+        if (ownDb)
+            await closeRegistry(db);
+    }
+}
+// W2.2 — Lane M FTS reconcile of on-disk vaults so a `lyt init` re-run leaves
+// search FRESH. Operates on each vault's OWN libSQL db (under LYT_HOME), so it
+// is hermetic + side-effect-local. Per-vault failure is swallowed (never-fail).
+async function reconcileVaults(vaultPaths) {
+    const reconciled = [];
+    for (const p of vaultPaths) {
+        try {
+            await backfillFigmentCaches(p);
+            reconciled.push(p);
+        }
+        catch (err) {
+            const msg = err instanceof Error ? err.message : String(err);
+            // eslint-disable-next-line no-console
+            console.error(`lyt init: reconcile of ${p} failed non-fatally — ${msg}`);
+        }
+    }
+    return reconciled;
+}
+// W1.2 — run the injected heal runner, swallowing any failure so heal can
+// NEVER fail an init (D30 never-fail). Returns null when no runner was
+// supplied (the hermetic-test default) or when the heal threw.
+async function runHealIfProvided(args) {
+    if (args.heal === undefined)
+        return null;
+    try {
+        return await args.heal();
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        // eslint-disable-next-line no-console
+        console.error(`lyt init: heal step failed non-fatally — ${msg}`);
+        return null;
+    }
+}
+// Brief B (B.1) — run the injected materialize-publish runner, swallowing any
+// failure so it can NEVER fail an init (never-fail posture, same as heal/regen).
+// Returns null when no runner was supplied (hermetic-test default) or it threw.
+// Runs AFTER the pod.yon regen so the pod commit captures the populated manifest.
+async function runMaterializeIfProvided(args, db) {
+    if (args.materializePublish === undefined)
+        return null;
+    try {
+        return await args.materializePublish(db);
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        // eslint-disable-next-line no-console
+        console.error(`lyt init: materialize-publish step failed non-fatally — ${msg}`);
+        return null;
+    }
+}
+// V-A-11 — route a fresh-state init with a resolvable remote pod through the
+// wizard's PROVEN engine (adoptAndPrimeFlow), which clones the pod + recovers its
+// vaults from pod.yon. This is the fix for the empty-scaffold `--auto` bug: the
+// fresh branch's doFreshBranch scaffolds personal/main BEFORE the federation forge
+// and never recovers vault CONTENT; adoptAndPrimeFlow orders it correctly
+// (adopt pod → clone vaults → scaffold only if 0 recovered).
+async function doAdoptBranch(args, db, handle) {
+    // MF2 — skipDiscover:true makes adopt MANIFEST-AUTHORITATIVE (pod.yon is the
+    // catalog): deterministic, and it eliminates the gh-walk-reaches-the-real-account
+    // hole (discoverFlow walks `gh api /user/repos`, which LYT_HOME does not sandbox).
+    // noPush:true — adopt writes only local, un-pushed init commits (V-A-9: a
+    // machine-id discriminator gates the PUSH, not the adopt). Reuse the SAME
+    // federationGhClient the router probed with (router + flow cannot disagree).
+    let adopt;
+    try {
+        adopt = await adoptAndPrimeFlow({
+            handle,
+            registryDb: db,
+            noPush: true,
+            skipDiscover: true,
+            ...(args.federationGhClient !== undefined
+                ? { federationGhClient: args.federationGhClient }
+                : {}),
+            ...(args.meshGhClient !== undefined ? { meshGhClient: args.meshGhClient } : {}),
+            ...(args.vaultCloneFn !== undefined ? { vaultCloneFn: args.vaultCloneFn } : {}),
+        });
+    }
+    catch (err) {
+        // a review finding (release review) — the pod/vault clone threw (network drop, private-repo
+        // credential miss with GIT_TERMINAL_PROMPT=0, gh/git failure). Do NOT crash and
+        // do NOT silently fall through to an empty `fresh` scaffold (that would
+        // re-introduce the exact V-A-11 empty-pod symptom). Return a structured,
+        // AI-actionable failure; the common pod-clone throw leaves the registry empty
+        // (re-runnable). The COMMAND LAYER owns all rendering — no console.error here
+        // (Phase-D a review finding: a flow-layer log duplicated the message + leaked a non-JSON
+        // line onto stderr under --json).
+        const reason = err instanceof Error ? err.message : String(err);
+        return { adoptError: { reason } };
+    }
+    return {
+        adopt: {
+            podBranch: adopt.podBranch,
+            podHandle: adopt.podHandle,
+            podLocalPath: adopt.podLocalPath,
+            vaultsRecoveredFromManifest: adopt.vaultsRecoveredFromManifest,
+            vaultsAcquired: adopt.vaultsAcquired,
+            manifestSkipped: adopt.manifestSkipped,
+            firstVaultCreated: adopt.firstVaultCreated,
+            primaryVaultPath: adopt.primaryVaultPath,
+            primaryMeshName: adopt.primaryMeshName,
+            reconciledVaultPaths: adopt.reconciledVaultPaths,
+        },
+        // Surface the reconcile at the top level too (parity with fresh/re-init —
+        // the command layer reads reconciledVaultPaths for its re-index summary).
+        reconciledVaultPaths: adopt.reconciledVaultPaths,
+    };
+}
+async function doFreshBranch(args, db) {
+    const meshName = args.customOverrides?.meshName ?? "personal";
+    const onPhase = args.onPhase ?? (() => { });
+    // V-A-1 (Phase E) — establish identity BEFORE the scaffold. meshInitFlow +
+    // the vault scaffold call getIdentity() / getHandleFromIdentity(), which
+    // HARD-THROW gh-less ("Identity refresh failed: GitHub CLI is not
+    // authenticated"). The provisional minting used to run AFTER meshInitFlow, so
+    // gh-less `lyt init --auto` threw MID-SCAFFOLD and left a partial pod
+    // (registry.db + patterns/ + a half-built vaults/ with no personal/main —
+    // the very state that then errored `no vault named 'personal/main'`).
+    // Resolving — or minting a PROVISIONAL local identity — FIRST means the
+    // scaffold's getIdentity() resolves from the just-written cache and the
+    // gh-less `--auto` degrades to a LOCAL pod, exactly like the interactive
+    // wizard (the brief's reference), instead of half-failing.
+    //
+    // D34 (OD-LOCALFIRST): no gh handle resolves → mint a provisional identity
+    // (default OS username) + forge LOCAL-ONLY (no gh probe, no remote). `lyt
+    // sync` reconciles to the real gh handle at connect. A provisional cache for
+    // THIS handle → stay local-only too (don't gh-probe).
+    let handle = args.handle ?? safeIdentityResolve();
+    let localOnly = false;
+    if (handle === null) {
+        handle = deriveProvisionalHandle();
+        writeProvisionalIdentity(handle);
+        localOnly = true;
+    }
+    else if (args.handle === undefined) {
+        // MF1 — provisional-cache → local-first via the shared resolveLocalFirst
+        // predicate. The handle-match guard stays: only treat as local-only when the
+        // provisional cache is THIS handle.
+        const cached = readIdentityCache();
+        if (cached !== null && cached.handle === handle && resolveLocalFirst(cached)) {
+            localOnly = true;
+        }
+    }
+    // (a) Scaffold the personal mesh (which scaffolds personal/main as the
+    // mesh's main vault per meshInitFlow). `noPush: true` per OD-3 default;
+    // the handler explicitly publishes later via `lyt sync` (D31 Brief B). The
+    // identity established above lets the scaffold's getIdentity() resolve
+    // locally gh-less (V-A-1).
+    await onPhase("git-init", "your personal mesh + main vault");
+    const meshResult = await meshInitFlow({
+        name: meshName,
+        noPush: true,
+        // Open-once seam (A.4): reuse the bootstrap's registry connection so
+        // mesh-init does not open a 2nd one (nested-open SQLITE_BUSY risk).
+        db,
+        ...(args.meshGhClient !== undefined ? { ghClient: args.meshGhClient } : {}),
+    });
+    // (b) Forge the federation repo locally. `pushToRemote: false` per OD-3
+    // default. The federation init's own three-branch state-machine handles the
+    // case where the remote repo already exists on GH (Branch B adopted) — we
+    // don't second-guess it here. localOnly (resolved above) forges the pod
+    // without any gh probe/remote.
+    let federation;
+    if (handle !== null) {
+        // Forging phase: federationInitFlow runs a sync prelude (registry probe,
+        // git init, pod.yon write) THEN its own per-op gh spinner for the
+        // `gh repo create` spawn. Re-label the spanning spinner to "Forging…"
+        // here so the sync prelude is covered too (it was the silent gap F7
+        // wrapped only the spawn — leaving the prelude dark).
+        await onPhase("create", `your pod repo (${handle}/lyt-pod)`);
+        try {
+            const fedResult = await federationInitFlow({
+                handle,
+                pushToRemote: false,
+                localOnly,
+                db,
+                ...(args.federationGhClient !== undefined ? { ghClient: args.federationGhClient } : {}),
+            });
+            federation = {
+                handle: fedResult.handle,
+                fedRidHex: fedResult.fedRidHex,
+                branch: fedResult.branch,
+                localPath: fedResult.localPath,
+                federationYonPath: fedResult.federationYonPath,
+                remoteCreated: fedResult.remoteCreated,
+                pushed: fedResult.pushed,
+                remoteFullName: fedResult.remoteFullName,
+            };
+        }
+        catch (err) {
+            // Federation init failure is NON-FATAL per OD-3 default — the
+            // personal mesh + personal/main vault are already on disk; the
+            // handler can re-invoke `lyt init` (which lands in re-init branch)
+            // or run `lyt federation init` directly to recover. Emit the
+            // failure as a console.error so the handler sees it without
+            // forcing the whole bootstrap to fail.
+            const msg = err instanceof Error ? err.message : String(err);
+            // eslint-disable-next-line no-console
+            console.error(`lyt init (fresh): federation init failed non-fatally — ${msg}`);
+        }
+    }
+    // D31 (Brief A) — regenerate the derived pod manifest from the now-populated
+    // registry so `lyt init` (fresh) leaves a POPULATED pod.yon listing
+    // personal/main (acceptance #1). Runs AFTER the federation forge wrote the
+    // skeleton + federation_state row. Non-fatal; reuses the open db.
+    if (handle !== null) {
+        await regeneratePodManifestNonFatal(db, {
+            handle,
+            ...(args.nowIso !== undefined ? { nowIso: args.nowIso } : {}),
+        });
+    }
+    // W2.2 — index the freshly-scaffolded vault so it is search-fresh on first
+    // use (mirrors the adopt path's reconcile; non-fatal).
+    const reconciledVaultPaths = await reconcileVaults([meshResult.mainVault.path]);
+    return {
+        meshAssignment: {
+            meshRidHex: meshResult.meshRidHex,
+            meshName: meshResult.meshName,
+            meshAutoCreated: true,
+            mainVaultName: meshResult.mainVault.name,
+            mainVaultPath: meshResult.mainVault.path,
+        },
+        ...(federation !== undefined ? { federation } : {}),
+        reconciledVaultPaths,
+    };
+}
+async function doReInitBranch(args, db) {
+    const vaults = await listVaults(db);
+    const issues = [];
+    for (const vault of vaults) {
+        const status = await probeVaultIntegrity(db, vault);
+        issues.push(status);
+    }
+    // W2.2 — re-index every HEALTHY vault so a re-run leaves search fresh (the
+    // spec's "existing structure on disk → re-sync + re-index"). Only vaults
+    // that probed `ok` are reconciled; missing/unparseable are skipped (their
+    // db isn't reliably readable). Non-fatal per vault.
+    const okPaths = vaults
+        .filter((v) => issues.find((i) => i.vaultName === v.name)?.status === "ok")
+        .map((v) => v.path);
+    const reconciledVaultPaths = await reconcileVaults(okPaths);
+    // D31 (Brief A) — re-init against an existing pod regenerates pod.yon so it
+    // reflects the ACTUAL registered vaults (acceptance #2). Non-fatal; skipped
+    // if the pod has no federation_state yet.
+    await regeneratePodManifestNonFatal(db, args.nowIso !== undefined ? { nowIso: args.nowIso } : {});
+    return { integrityIssues: issues, reconciledVaultPaths };
+}
+async function probeVaultIntegrity(db, vault) {
+    // (a) Disk presence.
+    if (!existsSync(vault.path)) {
+        return {
+            vaultName: vault.name,
+            status: "missing",
+            error: `vault path does not exist: ${vault.path}`,
+        };
+    }
+    // (b) vault.yon presence.
+    const yonPath = `${vault.path}/.lyt/vault.yon`;
+    if (!existsSync(yonPath)) {
+        return {
+            vaultName: vault.name,
+            status: "missing",
+            error: `vault.yon not found at ${yonPath}`,
+        };
+    }
+    // (c) vault.yon parses.
+    let parsed;
+    try {
+        parsed = parseVaultYon(readFileSync(yonPath, "utf8"));
+    }
+    catch (err) {
+        const msg = err instanceof Error ? err.message : String(err);
+        return {
+            vaultName: vault.name,
+            status: "unparseable",
+            error: msg,
+        };
+    }
+    // (d) home_mesh_rid resolves (if set).
+    if (vault.homeMeshRid !== null) {
+        const meshRow = await getMeshByRid(db, vault.homeMeshRid);
+        if (meshRow === null) {
+            return {
+                vaultName: vault.name,
+                status: "orphaned-home-mesh",
+                error: `home_mesh_rid does not resolve to a meshes row`,
+            };
+        }
+    }
+    // Re-bind the parsed reference so it isn't flagged unused.
+    void parsed.rid;
+    return { vaultName: vault.name, status: "ok" };
+}
+async function doDiscoveryBranch(args, db, meshes) {
+    const handle = args.handle ?? safeIdentityResolve();
+    if (handle === null) {
+        // No identity → empty discovery (read-only flow stays well-defined).
+        return { discoveredRepos: [] };
+    }
+    const probe = args.discoveryProbe ?? defaultDiscoveryProbe();
+    const probed = await probe.probe(handle);
+    // Filter: keep lyt-prefix OR lyt-public-topic kinds (OD-5 default — the
+    // .lyt/vault.yon per-repo probe is deferred to v1.C.3). Probe is
+    // expected to tag each row with its source `kind`; the bootstrap
+    // doesn't re-classify.
+    const filtered = probed.repos.filter((r) => r.kind === "lyt-prefix" || r.kind === "lyt-public-topic");
+    // Cross-check against the local registry. A repo is "already in
+    // registry" when one of the registered meshes has `push_target` that
+    // matches `<handle>/<name>` (i.e. a known mesh-main repo) OR matches
+    // the bare name (legacy lyt- prefix). We use a Set for O(1) lookup
+    // even though discovery sets are small.
+    const knownPushTargets = new Set();
+    for (const m of meshes) {
+        if (m.pushTarget !== null)
+            knownPushTargets.add(m.pushTarget);
+    }
+    // Also cross-check the vault.git_url surface in case a vault was
+    // adopted from a public repo that didn't go through `lyt mesh init`.
+    // Inexpensive ORM walk; bounded by registered vault count.
+    const knownVaultUrls = new Set();
+    const knownVaults = await listVaults(db);
+    for (const v of knownVaults) {
+        if (v.gitUrl !== null) {
+            // Strip protocol + .git suffix for fuzzy match against
+            // `<handle>/<repo>` slug shape (e.g. https://github.com/x/y.git →
+            // x/y).
+            const m = v.gitUrl.match(/[/:]([^/]+\/[^/]+?)(?:\.git)?$/);
+            if (m)
+                knownVaultUrls.add(m[1]);
+        }
+    }
+    // Annotate alreadyInRegistry + Lock 0.3 deterministic sort.
+    const annotated = filtered.map((r) => ({
+        fullName: r.fullName,
+        kind: r.kind,
+        alreadyInRegistry: r.alreadyInRegistry || knownPushTargets.has(r.fullName) || knownVaultUrls.has(r.fullName),
+    }));
+    annotated.sort((a, b) => a.fullName.localeCompare(b.fullName));
+    return { discoveredRepos: annotated };
+}
+// Default impl returns an empty probe — the production gh-api integration
+// ships in v1.C.3 (per OD-5 default; v1.B.4 keeps discovery wired
+// structurally with the probe as an injectable seam used by tests + the
+// future v1.C.3 prod impl). This default makes the no-injection happy
+// path predictable: discovery returns an empty list rather than throwing.
+function defaultDiscoveryProbe() {
+    return {
+        async probe(_handle) {
+            return { repos: [] };
+        },
+    };
+}
+function safeIdentityResolve() {
+    try {
+        return getHandleFromIdentity();
+    }
+    catch {
+        return null;
+    }
+}
+function finalize(partial, startedAtMs, nowIso) {
+    const elapsed = nowMs(nowIso) - startedAtMs;
+    return {
+        ...partial,
+        durationMs: Math.max(0, elapsed),
+    };
+}
+function nowMs(nowIso) {
+    if (nowIso !== undefined)
+        return Date.parse(nowIso);
+    return Date.now();
+}
+//# sourceMappingURL=init-bootstrap.js.map

package/dist/flows/init-bootstrap.js.map

@@ -0,0 +1 @@
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package/dist/index.d.ts

@@ -0,0 +1,11 @@
+export { buildVaultSubcommand, buildRegistrySubcommand, buildHelpCommand, buildDoctorCommand, buildPatternCommand, } from "@younndai/lyt-vault";
+export { buildMeshSubcommand, buildSyncCommand } from "@younndai/lyt-mesh";
+export { buildMcpSubcommand } from "@younndai/lyt-mcp";
+export { buildSearchCommand } from "./commands/search.js";
+export { buildPrimerCommand } from "./commands/primer.js";
+export { buildLytInitCommand } from "./commands/init.js";
+export { healPod, summarizeHeal } from "./flows/heal.js";
+export type { HealResult, HealPodOptions, ManualHealAction, ManualHealEntry, } from "./flows/heal.js";
+export { initBootstrapFlow } from "./flows/init-bootstrap.js";
+export type { DiscoveredRepo, DiscoveredRepoKind, DiscoveryProbe, DiscoveryProbeResult, InitBootstrapArgs, InitBootstrapBranch, InitBootstrapCustomOverrides, InitBootstrapFederation, InitBootstrapMeshAssignment, InitBootstrapMode, InitBootstrapResult, IntegrityIssue, IntegrityStatus, } from "./flows/init-bootstrap.js";
+//# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/index.js

@@ -0,0 +1,27 @@
+/*
+ * Copyright 2026 MARLINK TRADING SRL (YounndAI)
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ * http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+// @younndai/lyt is primarily a CLI meta package. For programmatic access,
+// import from @younndai/lyt-vault, lyt-mesh, or lyt-mcp directly. This module
+// re-exports the unified subcommand factories so consumers can compose them.
+export { buildVaultSubcommand, buildRegistrySubcommand, buildHelpCommand, buildDoctorCommand, buildPatternCommand, } from "@younndai/lyt-vault";
+export { buildMeshSubcommand, buildSyncCommand } from "@younndai/lyt-mesh";
+export { buildMcpSubcommand } from "@younndai/lyt-mcp";
+export { buildSearchCommand } from "./commands/search.js";
+export { buildPrimerCommand } from "./commands/primer.js";
+export { buildLytInitCommand } from "./commands/init.js";
+export { healPod, summarizeHeal } from "./flows/heal.js";
+export { initBootstrapFlow } from "./flows/init-bootstrap.js";
+//# sourceMappingURL=index.js.map

package/dist/index.js.map

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