@xrkseek/harness 0.4.0-rc.4 → 0.4.1

package/node_modules/@xrkseek/checkpoint/dist/store.js

@@ -0,0 +1,312 @@
+import { createHash } from "node:crypto";
+import { existsSync, mkdirSync, readFileSync, writeFileSync } from "node:fs";
+import path from "node:path";
+import { readJsonFile, writeJsonFileAtomic } from "./json-file.js";
+import { WorkspaceCheckpointError, } from "./types.js";
+const INDEX_VERSION = 1;
+const ID_LENGTH = 12;
+/**
+ * Synthetic commit identity for shadow commits. The store must not depend on
+ * (or write to) the operator's git config.
+ */
+export const CHECKPOINT_AUTHOR_NAME = "XRK Checkpoint";
+export const CHECKPOINT_AUTHOR_EMAIL = "checkpoint@xrk.invalid";
+/** Stable, filesystem-safe id for one workspace path. */
+export function workspaceCheckpointId(workspaceDir) {
+    return createHash("sha1")
+        .update(path.resolve(workspaceDir))
+        .digest("hex")
+        .slice(0, ID_LENGTH);
+}
+/** `<workspace>/.xrk/checkpoints` — shadow repo + index live here. */
+export function workspaceCheckpointDir(workspaceDir) {
+    return path.join(path.resolve(workspaceDir), ".xrk", "checkpoints");
+}
+/** Shadow git dir inside the checkpoint dir. */
+export function shadowGitDir(shadowDir) {
+    return path.join(shadowDir, "git");
+}
+/** Snapshot index (chronological records) inside the checkpoint dir. */
+export function checkpointIndexPath(shadowDir) {
+    return path.join(shadowDir, "index.json");
+}
+/** Git-level ignore file pinning the shadow dir out of every snapshot. */
+export function checkpointExcludePath(shadowDir) {
+    return path.join(shadowDir, "exclude");
+}
+function splitLines(text) {
+    return text
+        .split(/\r?\n/)
+        .map((line) => line.trim())
+        .filter((line) => line.length > 0);
+}
+/** Parse `git clean` output lines carrying a known prefix. */
+function parseCleanOutput(stdout, prefix) {
+    const out = [];
+    for (const line of splitLines(stdout)) {
+        if (!line.startsWith(prefix))
+            continue;
+        const entry = line.slice(prefix.length).trim();
+        if (entry.length > 0)
+            out.push(entry);
+    }
+    return out;
+}
+function isCheckpointRecord(value) {
+    if (!value || typeof value !== "object" || Array.isArray(value))
+        return false;
+    const record = value;
+    return (typeof record.id === "string" &&
+        record.id.length > 0 &&
+        typeof record.sessionId === "string" &&
+        typeof record.seq === "number" &&
+        Number.isFinite(record.seq) &&
+        typeof record.createdAt === "number" &&
+        typeof record.fileCount === "number");
+}
+/**
+ * Turn-scoped workspace snapshots in a shadow git repo.
+ *
+ * Every command pins `--git-dir=<shadow>` **and** `--work-tree=<workspace>`, so
+ * the operator's own repository (and its history) is never touched. `snapshot`
+ * commits the current worktree (`--allow-empty`, so a no-change turn still
+ * records a recoverable point); `restore` checks that commit back out, leaving
+ * files the snapshot never saw in place unless `prune` is requested.
+ *
+ * The shadow dir usually lives *inside* the workspace, so it is pinned into
+ * `core.excludesFile`. Without that, `add -A` would stage the repo's own
+ * objects and `clean -fd` would delete them.
+ */
+export class WorkspaceCheckpointStore {
+    workspaceDir;
+    shadowDir;
+    /** {@link workspaceCheckpointId} for this workspace. */
+    id;
+    /** Git-level ignore file (see {@link checkpointExcludePath}). */
+    excludesFile;
+    gitDir;
+    indexFile;
+    runGit;
+    now;
+    /** Work-tree-relative shadow path, when the shadow lives in the workspace. */
+    shadowRelPath;
+    records;
+    repoReady = false;
+    constructor(options) {
+        const workspace = path.resolve(options.workspaceDir);
+        this.workspaceDir = workspace;
+        this.id = workspaceCheckpointId(workspace);
+        const shadow = path.resolve(options.shadowDir ?? workspaceCheckpointDir(workspace));
+        this.shadowDir = shadow;
+        this.gitDir = shadowGitDir(shadow);
+        this.excludesFile = checkpointExcludePath(shadow);
+        this.indexFile = options.indexFile ?? checkpointIndexPath(shadow);
+        const rel = path.relative(workspace, shadow);
+        this.shadowRelPath =
+            rel.length > 0 && !rel.startsWith("..") && !path.isAbsolute(rel)
+                ? rel.split(path.sep).join("/")
+                : undefined;
+        this.runGit = options.runGit;
+        this.now = options.now ?? (() => Date.now());
+        this.records = this.loadIndex();
+    }
+    /**
+     * Git-level argv shared by every command.
+     *
+     * - `core.excludesFile` keeps the shadow dir out of staging and `clean`.
+     * - `core.autocrlf=false` stops a Windows checkout rewriting line endings.
+     * - A synthetic commit identity + `commit.gpgsign=false` make shadow commits
+     *   independent of the operator's git config, so snapshotting works on a
+     *   machine with no `user.name` / `user.email` and never tries to sign.
+     */
+    get baseArgs() {
+        return [
+            `--git-dir=${this.gitDir}`,
+            `--work-tree=${this.workspaceDir}`,
+            "-c",
+            `core.excludesFile=${this.excludesFile}`,
+            "-c",
+            "core.autocrlf=false",
+            "-c",
+            "core.safecrlf=false",
+            "-c",
+            "core.filemode=false",
+            "-c",
+            "commit.gpgsign=false",
+            "-c",
+            `user.name=${CHECKPOINT_AUTHOR_NAME}`,
+            "-c",
+            `user.email=${CHECKPOINT_AUTHOR_EMAIL}`,
+        ];
+    }
+    async exec(args) {
+        return this.runGit([...this.baseArgs, ...args]);
+    }
+    async execOk(args, errorCode, what) {
+        const result = await this.exec(args);
+        if (result.code === -1) {
+            throw new WorkspaceCheckpointError("git-unavailable", `git ${what} could not start: ${result.stderr.trim() || "git was not found on PATH"}`);
+        }
+        if (result.code !== 0) {
+            throw new WorkspaceCheckpointError(errorCode, `git ${what} failed (exit ${result.code}): ${result.stderr.trim() || result.stdout.trim()}`);
+        }
+        return result;
+    }
+    /**
+     * (Re)write the git-level ignore file. Idempotent and cheap: patterns are
+     * only rewritten when the content differs. Safety-critical — `clean -fd`
+     * must never see the shadow repo as untracked.
+     */
+    ensureExcludesFile() {
+        mkdirSync(this.shadowDir, { recursive: true });
+        const patterns = [];
+        if (this.shadowRelPath)
+            patterns.push(`${this.shadowRelPath}/`);
+        const content = patterns.length > 0 ? `${patterns.join("\n")}\n` : "";
+        try {
+            if (existsSync(this.excludesFile)) {
+                if (readFileSync(this.excludesFile, "utf8") === content)
+                    return;
+            }
+            writeFileSync(this.excludesFile, content, "utf8");
+        }
+        catch {
+            /* read-only workspace: git will still work, only self-ignore is lost */
+        }
+    }
+    /** Create the shadow repo on first use; idempotent afterwards. */
+    async ensureRepo() {
+        if (this.repoReady)
+            return;
+        this.ensureExcludesFile();
+        if (!existsSync(path.join(this.gitDir, "HEAD"))) {
+            await this.execOk(["init", "--quiet"], "init-failed", "init (shadow repo)");
+        }
+        this.repoReady = true;
+    }
+    /** Like {@link ensureRepo} but never creates: a missing repo is a lost point. */
+    async requireRepo() {
+        if (this.repoReady)
+            return;
+        if (!existsSync(path.join(this.gitDir, "HEAD"))) {
+            throw new WorkspaceCheckpointError("unknown-checkpoint", `shadow checkpoint repo is missing at ${this.gitDir}`);
+        }
+        this.ensureExcludesFile();
+        this.repoReady = true;
+    }
+    /** Snapshot the workspace and record it against a session seq. */
+    async snapshot(input) {
+        const sessionId = input.sessionId.trim();
+        if (!sessionId) {
+            throw new WorkspaceCheckpointError("bad-argument", "snapshot: sessionId is required");
+        }
+        if (!Number.isFinite(input.seq)) {
+            throw new WorkspaceCheckpointError("bad-argument", "snapshot: seq must be a finite number");
+        }
+        await this.ensureRepo();
+        await this.execOk(["add", "-A"], "snapshot-failed", "add -A");
+        const label = input.label?.trim();
+        const message = [
+            `xrk checkpoint session=${sessionId} seq=${input.seq}`,
+            ...(label ? [`label=${label}`] : []),
+        ].join(" ");
+        await this.execOk(["commit", "--quiet", "--allow-empty", "-m", message], "snapshot-failed", "commit");
+        const rev = await this.execOk(["rev-parse", "HEAD"], "snapshot-failed", "rev-parse HEAD");
+        const id = rev.stdout.trim();
+        if (!id) {
+            throw new WorkspaceCheckpointError("snapshot-failed", "git rev-parse HEAD returned no commit id");
+        }
+        const files = await this.execOk(["ls-files"], "snapshot-failed", "ls-files");
+        const record = {
+            id,
+            sessionId,
+            seq: input.seq,
+            createdAt: this.now(),
+            ...(label ? { label } : {}),
+            fileCount: splitLines(files.stdout).length,
+        };
+        this.records.push(record);
+        this.saveIndex();
+        return record;
+    }
+    /** Chronological (oldest first) records, newest last. */
+    list() {
+        return [...this.records];
+    }
+    get(id) {
+        const needle = id.trim();
+        const found = this.records.find((record) => record.id === needle);
+        if (!found) {
+            throw new WorkspaceCheckpointError("unknown-checkpoint", `unknown checkpoint: ${needle || "(empty id)"}`);
+        }
+        return found;
+    }
+    /** Untracked, non-ignored files present now but absent from the snapshot. */
+    async extraFiles() {
+        const clean = await this.execOk(["clean", "-nd"], "restore-failed", "clean -nd");
+        return parseCleanOutput(clean.stdout, "Would remove ");
+    }
+    /** What a restore would restore and which files it would leave behind. */
+    async planRestore(id) {
+        this.get(id);
+        await this.requireRepo();
+        const target = id.trim();
+        const tree = await this.execOk(["ls-tree", "-r", "--name-only", target], "restore-failed", `ls-tree ${target}`);
+        return {
+            id: target,
+            fileCount: splitLines(tree.stdout).length,
+            extra: await this.extraFiles(),
+        };
+    }
+    /**
+     * Restore the snapshot into the worktree. Files the snapshot does not know
+     * about survive unless `prune` is set.
+     */
+    async restore(id, options = {}) {
+        this.get(id);
+        await this.requireRepo();
+        const target = id.trim();
+        const plan = await this.planRestore(target);
+        await this.execOk(["checkout", "--force", target, "--", "."], "restore-failed", `checkout ${target}`);
+        let removed = [];
+        if (options.prune) {
+            const clean = await this.execOk(["clean", "-fd"], "restore-failed", "clean -fd");
+            removed = parseCleanOutput(clean.stdout, "Removing ");
+        }
+        return {
+            ...plan,
+            restored: plan.fileCount,
+            removed,
+        };
+    }
+    /**
+     * Drop the oldest records, keeping the newest `keep`. Index-only: the
+     * shadow commits stay until git prunes them, so a dropped record is still
+     * restorable by sha when the operator kept a copy.
+     */
+    prune(keep) {
+        if (!Number.isInteger(keep) || keep < 0) {
+            throw new WorkspaceCheckpointError("bad-argument", `prune: keep must be a non-negative integer (got ${String(keep)})`);
+        }
+        const drop = Math.max(0, this.records.length - keep);
+        if (drop === 0)
+            return [];
+        const removed = this.records.splice(0, drop).map((record) => record.id);
+        this.saveIndex();
+        return removed;
+    }
+    loadIndex() {
+        const raw = readJsonFile(this.indexFile);
+        const records = raw?.records;
+        if (!Array.isArray(records))
+            return [];
+        return records.filter(isCheckpointRecord);
+    }
+    saveIndex() {
+        writeJsonFileAtomic(this.indexFile, {
+            version: INDEX_VERSION,
+            records: this.records,
+        });
+    }
+}
+//# sourceMappingURL=store.js.map

package/node_modules/@xrkseek/checkpoint/dist/store.js.map

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package/node_modules/@xrkseek/checkpoint/dist/types.d.ts

@@ -0,0 +1,65 @@
+/**
+ * Recoverable workspace file snapshots for turn rewind.
+ *
+ * A snapshot is a commit in a **shadow** git repository: a separate
+ * `--git-dir` that points at the workspace as its work-tree. The user's own
+ * `.git` is never read or written, so checkpointing works in a plain
+ * directory and cannot rewrite the operator's history.
+ */
+/** Result of one git invocation. Negative `code` means git did not start. */
+export interface GitResult {
+    readonly code: number;
+    readonly stdout: string;
+    readonly stderr: string;
+}
+/**
+ * Injected git seam. Production uses {@link createProcessGitRunner}; tests
+ * pass a scripted fake so the command sequence is asserted without spawning.
+ */
+export type GitRunner = (args: readonly string[], opts?: {
+    readonly cwd?: string;
+}) => Promise<GitResult>;
+/** One recoverable point, keyed by the shadow commit sha. */
+export interface WorkspaceCheckpointRecord {
+    /** Shadow-repo commit sha — the snapshot id used by `restore`. */
+    readonly id: string;
+    readonly sessionId: string;
+    /** Session log seq the workspace state precedes. */
+    readonly seq: number;
+    /** Epoch ms when the snapshot was taken. */
+    readonly createdAt: number;
+    readonly label?: string;
+    /** Tracked files captured at this point. */
+    readonly fileCount: number;
+}
+export interface SnapshotInput {
+    readonly sessionId: string;
+    /** Session log seq; `-1` for a snapshot taken before the first turn. */
+    readonly seq: number;
+    readonly label?: string;
+}
+export interface RestoreOptions {
+    /**
+     * Also delete worktree files the snapshot does not know about
+     * (`git clean -fd`). Ignored paths are never touched. Default `false`.
+     */
+    readonly prune?: boolean;
+}
+export interface RestorePlan {
+    readonly id: string;
+    /** Files the snapshot defines (restored by `checkout`). */
+    readonly fileCount: number;
+    /** Untracked, non-ignored files present now but absent from the snapshot. */
+    readonly extra: readonly string[];
+}
+export interface RestoreResult extends RestorePlan {
+    readonly restored: number;
+    readonly removed: readonly string[];
+}
+export type WorkspaceCheckpointErrorCode = "bad-argument" | "git-unavailable" | "init-failed" | "snapshot-failed" | "restore-failed" | "unknown-checkpoint";
+/** Failure with a stable code so callers can map it to a tool result. */
+export declare class WorkspaceCheckpointError extends Error {
+    readonly code: WorkspaceCheckpointErrorCode;
+    constructor(code: WorkspaceCheckpointErrorCode, message: string);
+}
+//# sourceMappingURL=types.d.ts.map

package/node_modules/@xrkseek/checkpoint/dist/types.d.ts.map

@@ -0,0 +1 @@
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package/node_modules/@xrkseek/checkpoint/dist/types.js

@@ -0,0 +1,18 @@
+/**
+ * Recoverable workspace file snapshots for turn rewind.
+ *
+ * A snapshot is a commit in a **shadow** git repository: a separate
+ * `--git-dir` that points at the workspace as its work-tree. The user's own
+ * `.git` is never read or written, so checkpointing works in a plain
+ * directory and cannot rewrite the operator's history.
+ */
+/** Failure with a stable code so callers can map it to a tool result. */
+export class WorkspaceCheckpointError extends Error {
+    code;
+    constructor(code, message) {
+        super(message);
+        this.name = "WorkspaceCheckpointError";
+        this.code = code;
+    }
+}
+//# sourceMappingURL=types.js.map

package/node_modules/@xrkseek/checkpoint/dist/types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"types.js","sourceRoot":"","sources":["../src/types.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAoEH,yEAAyE;AACzE,MAAM,OAAO,wBAAyB,SAAQ,KAAK;IACxC,IAAI,CAA+B;IAE5C,YAAY,IAAkC,EAAE,OAAe;QAC7D,KAAK,CAAC,OAAO,CAAC,CAAC;QACf,IAAI,CAAC,IAAI,GAAG,0BAA0B,CAAC;QACvC,IAAI,CAAC,IAAI,GAAG,IAAI,CAAC;IACnB,CAAC;CACF"}

package/node_modules/@xrkseek/checkpoint/package.json

@@ -0,0 +1,23 @@
+{
+  "name": "@xrkseek/checkpoint",
+  "version": "0.1.0",
+  "type": "module",
+  "exports": {
+    ".": {
+      "types": "./dist/index.d.ts",
+      "import": "./dist/index.js",
+      "default": "./dist/index.js"
+    }
+  },
+  "files": [
+    "dist",
+    "README.md"
+  ],
+  "license": "MIT",
+  "repository": {
+    "type": "git",
+    "url": "git+https://github.com/xrkseek/XRK-harness.git",
+    "directory": "packages/checkpoint"
+  },
+  "private": true
+}

package/node_modules/@xrkseek/code-runtime/README.md

@@ -1,13 +1,20 @@
 # @xrkseek/code-runtime
 
-Experimental Code Mode: `run_code` via worker_threads.
+Experimental Code Mode: `run_code`.
 
-**Default off.** Enable only with `--presentation code` or an experimental preset.
+**Default off.** Enable with `--presentation code` or an experimental preset.
 
-Bounds (overridable on `createWorkerCodeRuntime`):
+## Paths
+
+| Bridge | Runner | Nested tools |
+| --- | --- | --- |
+| Yes (`createRegistryCodeToolBridge`) | In-process AsyncFunction + `tools` Proxy | `await tools.name(args)` → live pipeline |
+| No | Worker thread (or SSH `CodeRuntime`) | Snippet only |
+
+Bounds (overridable on `createWorkerCodeRuntime` / `runCodeWithTools`):
 
 | Cap | Default |
 | --- | --- |
 | `timeoutMs` / `maxTimeoutMs` | 120s / 600s (per-call `timeoutMs` clamped) |
 | `maxOutputBytes` | 64MiB UTF-8 |
-| `maxOldGenerationSizeMb` | 512 (Worker `resourceLimits`) |
+| `maxOldGenerationSizeMb` | 512 (Worker `resourceLimits`; unused while bridged) |

package/node_modules/@xrkseek/code-runtime/dist/index.d.ts

@@ -1,4 +1,4 @@
-import type { ToolDefinition } from "@xrkseek/core-tools";
+import type { ToolDefinition, ToolPipeline, ToolRegistry } from "@xrkseek/core-tools";
 /** Largest delay Node schedules without clamping it to one millisecond. */
 export declare const MAX_TIMER_DELAY_MS = 2147483647;
 /** Default elapsed deadline for one `run_code` call (aligned with PTC node defaults). */
@@ -53,8 +53,48 @@ export declare function boundCodeOutput(text: string, maxBytes: number): {
 /**
  * Worker-thread JS runner. No npm install, no network by default.
  * Presentation mode only — default presets do NOT register this tool.
+ * Nested `tools.*` calls use {@link createRunCodeTool} with a tool bridge
+ * (in-process AsyncFunction); the worker path remains snippet-only.
  */
 export declare function createWorkerCodeRuntime(options?: CodeRuntimeOptions): CodeRuntime;
-/** Sole Code Mode wire: `run_code`. Sub-calls must re-enter the tool pipeline. */
-export declare function createRunCodeTool(runtime: CodeRuntime): ToolDefinition;
+/** Sole Code Mode wire: `run_code`. Sub-calls re-enter the tool pipeline via bridge. */
+export interface CodeToolCallResult {
+    readonly content: string;
+    readonly isError?: boolean;
+}
+/**
+ * Host bridge so `await tools.name(args)` re-enters the live tool waterfall
+ * (Codex / dsh code-mode nested dispatch). Omit → worker snippet only.
+ */
+export interface CodeToolBridge {
+    /** Names exposed on the `tools` Proxy (exclude `run_code` itself). */
+    readonly listNames: () => readonly string[];
+    readonly call: (name: string, args: unknown, signal?: AbortSignal) => Promise<CodeToolCallResult>;
+}
+/**
+ * Build a bridge over a live {@link ToolRegistry} (same waterfall as the agent).
+ * Nested calls cannot target `run_code` (no recursion).
+ */
+export declare function createRegistryCodeToolBridge(registry: ToolRegistry, options?: {
+    /** Prefer this so nested calls share policy / settle with the agent. */
+    readonly pipeline?: ToolPipeline;
+    /**
+     * Optional full override. Defaults to `runTool` (± pipeline).
+     */
+    readonly run?: (name: string, args: unknown, signal?: AbortSignal) => Promise<CodeToolCallResult>;
+}): CodeToolBridge;
+/**
+ * In-process program with `tools` / `console` (Codex/dsh code-mode shape).
+ * Source is the body of an async function — top-level `await` / `return` work.
+ * When a bridge is wired, this path is preferred over Worker/SSH snippet runners
+ * so nested `tools.*` can re-enter the host pipeline.
+ */
+export declare function runCodeWithTools(source: string, bridge: CodeToolBridge, signal?: AbortSignal, opts?: {
+    readonly timeoutMs?: number;
+    readonly maxTimeoutMs?: number;
+    readonly defaultTimeoutMs?: number;
+    readonly maxOutputBytes?: number;
+}): Promise<CodeRunResult>;
+/** Sole Code Mode wire: `run_code`. With a bridge, programs call `await tools.name(args)`. */
+export declare function createRunCodeTool(runtime: CodeRuntime, bridge?: CodeToolBridge): ToolDefinition;
 //# sourceMappingURL=index.d.ts.map

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