@xpack/doxygen2docusaurus 2.0.0 → 2.1.0

package/src/docusaurus/view-model/files-and-folders-vm.ts

@@ -0,0 +1,1293 @@
+/*
+ * This file is part of the xPack project (http://xpack.github.io).
+ * Copyright (c) 2025-2026 Liviu Ionescu. All rights reserved.
+ *
+ * Permission to use, copy, modify, and/or distribute this software
+ * for any purpose is hereby granted, under the terms of the MIT license.
+ *
+ * If a copy of the license was not distributed with this file, it can
+ * be obtained from https://opensource.org/licenses/MIT.
+ */
+
+// ----------------------------------------------------------------------------
+
+// import * as util from 'node:util'
+import assert from 'node:assert'
+
+import { CompoundBase } from './compound-base-vm.js'
+import type { CompoundDefDataModel } from '../../doxygen/data-model/compounds/compounddef-dm.js'
+import { CollectionBase } from './collection-base.js'
+import type {
+  NavbarItem,
+  SidebarCategory,
+  SidebarCategoryItem,
+  SidebarDocItem,
+  SidebarItem,
+  FrontMatter,
+} from '../types.js'
+import type { Workspace } from '../workspace.js'
+import { flattenPath, sanitizeHierarchicalPath } from '../utils.js'
+import type { ProgramListingDataModel } from '../../doxygen/data-model/compounds/descriptiontype-dm.js'
+import { FileTreeEntry } from './tree-entries-vm.js'
+import type { TreeEntryBase } from './tree-entries-vm.js'
+import { Class } from './classes-vm.js'
+import { Namespace } from './namespaces-vm.js'
+import { Concept } from './concepts-vm.js'
+
+// ----------------------------------------------------------------------------
+
+/**
+ * Manages the collection of file and folder documentation compounds.
+ *
+ * @remarks
+ * Handles the organisation and generation of file-based documentation,
+ * including folder hierarchies, file listings, sidebar generation, and
+ * index file creation. Provides a structured view of the source code
+ * organisation with proper navigation support.
+ *
+ * @public
+ */
+export class FilesAndFolders extends CollectionBase {
+  // compoundsById: Map<string, File | Folder>
+
+  /**
+   * Map of folder compounds indexed by identifier.
+   *
+   * @remarks
+   * Stores all folder instances for efficient lookup and hierarchy
+   * construction, separate from the main compounds collection.
+   */
+  compoundFoldersById: Map<string, Folder>
+
+  /**
+   * Map of file compounds indexed by identifier.
+   *
+   * @remarks
+   * Stores all file instances for efficient lookup and organisation,
+   * separate from the main compounds collection.
+   */
+  compoundFilesById: Map<string, File>
+
+  /**
+   * Array of top-level folders without parent folders.
+   *
+   * @remarks
+   * Contains folders that are at the root level of the documentation
+   * hierarchy, used for organising hierarchical displays.
+   */
+  topLevelFolders: Folder[] = []
+
+  /**
+   * Array of top-level files without parent folders.
+   *
+   * @remarks
+   * Contains files that are at the root level of the documentation
+   * hierarchy, not contained within any documented folder.
+   */
+  topLevelFiles: File[] = []
+
+  // folders: Folders
+
+  // --------------------------------------------------------------------------
+
+  /**
+   * Creates a new files and folders collection.
+   *
+   * @remarks
+   * Initialises the collection with separate maps for folders and files
+   * to enable efficient organisation and hierarchy construction.
+   *
+   * @param workspace - The workspace instance
+   */
+  constructor(workspace: Workspace) {
+    super(workspace)
+
+    // this.compoundsById = new Map()
+    this.compoundFoldersById = new Map()
+    this.compoundFilesById = new Map()
+  }
+
+  // --------------------------------------------------------------------------
+
+  /**
+   * Adds a file or folder compound to the collection.
+   *
+   * @remarks
+   * Creates either a File or Folder instance based on the compound kind,
+   * registers it in the appropriate collections, and returns the created
+   * instance for further processing.
+   *
+   * @param compoundDef - The compound definition for the file or folder
+   * @returns The created File or Folder instance
+   * @throws Error if compound kind is not 'file' or 'dir'
+   */
+  override addChild(compoundDef: CompoundDefDataModel): CompoundBase {
+    if (compoundDef.kind === 'file') {
+      const file = new File(this, compoundDef)
+      this.collectionCompoundsById.set(file.id, file)
+      this.compoundFilesById.set(file.id, file)
+      return file
+    } else if (compoundDef.kind === 'dir') {
+      const folder = new Folder(this, compoundDef)
+      this.collectionCompoundsById.set(folder.id, folder)
+      this.compoundFoldersById.set(folder.id, folder)
+      return folder
+    } else {
+      throw new Error(
+        `kind ${compoundDef.kind} not implemented in ${this.constructor.name}`
+      )
+    }
+  }
+
+  // --------------------------------------------------------------------------
+
+  /**
+   * Creates hierarchical relationships between file and folder compounds.
+   *
+   * @remarks
+   * Establishes parent-child relationships for folders and files,
+   * builds the complete file hierarchy, and generates relative paths
+   * and permalinks for all compounds. Registers files in the workspace
+   * for global lookup and identifies top-level entities.
+   */
+  override createCompoundsHierarchies(): void {
+    // Recreate files and folders hierarchies.
+    // console.log(this.compoundsById.size)
+    for (const [, folder] of this.compoundFoldersById) {
+      for (const childFolderId of folder.childrenFolderIds) {
+        const childFolder = this.compoundFoldersById.get(childFolderId)
+        assert(childFolder !== undefined)
+        if (this.workspace.options.debug) {
+          console.log(
+            'childFolderId',
+            childFolderId,
+            childFolder.compoundName,
+            'has parent',
+            folder.parent?.id ?? '(no parent id)',
+            folder.compoundName
+          )
+        }
+        childFolder.parent = folder
+        folder.children.push(childFolder)
+      }
+      for (const childFileId of folder.childrenFileIds) {
+        const childFile = this.compoundFilesById.get(childFileId)
+        if (childFile !== undefined) {
+          if (this.workspace.options.debug) {
+            console.log(
+              'childFileId',
+              childFileId,
+              childFile.compoundName,
+              'has parent',
+              folder.parent?.id ?? '(no parent id)',
+              folder.compoundName
+            )
+          }
+          childFile.parent = folder
+          folder.children.push(childFile)
+        } else {
+          console.warn(childFileId, 'not a child of', folder.id)
+        }
+      }
+    }
+
+    for (const [fileId, file] of this.compoundFilesById) {
+      this.workspace.viewModel.compoundsById.set(fileId, file)
+    }
+
+    for (const [folderId, folder] of this.compoundFoldersById) {
+      if (folder.parent === undefined) {
+        if (this.workspace.options.debug) {
+          console.log('topFolderId:', folderId, folder.compoundName)
+        }
+        this.topLevelFolders.push(folder)
+      }
+    }
+
+    for (const [fileId, file] of this.compoundFilesById) {
+      if (file.parent === undefined) {
+        if (this.workspace.options.debug) {
+          console.log('topFileId:', fileId, file.compoundName)
+        }
+        this.topLevelFiles.push(file)
+      }
+
+      const { locationFilePath } = file
+      assert(locationFilePath !== undefined)
+      this.workspace.filesByPath.set(locationFilePath, file)
+      if (this.workspace.options.debug) {
+        // console.log('filesByPath.set', path, file)
+        console.log('filesByPath.set', locationFilePath)
+      }
+    }
+
+    for (const [, folder] of this.compoundFoldersById) {
+      let parentPath = ''
+      if (folder.parent !== undefined) {
+        if (folder.parent instanceof Folder) {
+          parentPath = `${this.getRelativePathRecursively(folder.parent)}/`
+        }
+      }
+
+      // console.log(folder.compoundName)
+      folder.relativePath = `${parentPath}${folder.compoundName}`
+
+      const sanitizedPath: string = sanitizeHierarchicalPath(
+        folder.relativePath
+      )
+      folder.relativePermalink = `folders/${sanitizedPath}`
+
+      folder.sidebarId = `folders/${flattenPath(sanitizedPath)}`
+
+      // console.log('0', folder.id)
+      // console.log('1', folder.compoundName)
+      // console.log('2', folder.relativePermalink)
+      // console.log('3', folder.docusaurusId)
+      // console.log('4', folder.sidebarLabel)
+      // console.log('5', folder.indexName)
+      // console.log()
+    }
+
+    // Cannot be done in each object, since it needs the hierarchy.
+    for (const [, file] of this.compoundFilesById) {
+      let parentPath = ''
+      if (file.parent !== undefined) {
+        if (file.parent instanceof Folder) {
+          parentPath = `${this.getRelativePathRecursively(file.parent)}/`
+        }
+      }
+
+      // console.log(file.compoundName)
+      file.relativePath = `${parentPath}${file.compoundName}`
+
+      const sanitizedPath: string = sanitizeHierarchicalPath(file.relativePath)
+      file.relativePermalink = `files/${sanitizedPath}`
+
+      file.sidebarId = `files/${flattenPath(sanitizedPath)}`
+
+      // console.log('0', file.id)
+      // console.log('1', file.compoundName)
+      // console.log('2', file.relativePermalink)
+      // console.log('3', file.docusaurusId)
+      // console.log('4', file.sidebarLabel)
+      // console.log('5', file.indexName)
+      // console.log()
+    }
+  }
+
+  /**
+   * Recursively builds the relative path for a folder from root.
+   *
+   * @remarks
+   * Traverses the folder hierarchy upwards to construct the complete
+   * relative path by concatenating parent folder names. Used for
+   * generating proper folder permalinks and navigation structures.
+   *
+   * @param folder - The folder to build the path for
+   * @returns The complete relative path from root to the folder
+   */
+  private getRelativePathRecursively(folder: Folder): string {
+    let parentPath = ''
+    if (folder.parent !== undefined) {
+      if (folder.parent instanceof Folder) {
+        parentPath = `${this.getRelativePathRecursively(folder.parent)}/`
+      }
+    }
+    return `${parentPath}${folder.compoundName}`
+  }
+
+  // --------------------------------------------------------------------------
+
+  override addSidebarItems(sidebarCategory: SidebarCategory): void {
+    const indicesSet = this.workspace.indicesMaps.get('files')
+    if (indicesSet === undefined) {
+      return
+    }
+
+    // Add folders & files to the sidebar.
+    // Top level folders & files are added below a Files category
+    const filesCategory: SidebarCategoryItem = {
+      type: 'category',
+      label: 'Files',
+      link: {
+        type: 'doc',
+        id: `${this.workspace.sidebarBaseId}indices/files/index`,
+      },
+      collapsed: true,
+      items: [
+        {
+          type: 'category',
+          label: 'Hierarchy',
+          link: {
+            type: 'doc',
+            id: `${this.workspace.sidebarBaseId}indices/files/index`,
+          },
+          collapsed: true,
+          items: [],
+        },
+      ],
+    }
+
+    for (const folder of this.topLevelFolders) {
+      const item = this.createFolderSidebarItemRecursively(folder)
+      if (item !== undefined) {
+        ;(filesCategory.items[0] as SidebarCategoryItem).items.push(item)
+      }
+    }
+
+    for (const file of this.topLevelFiles) {
+      const item = this.createFileSidebarItem(file)
+      if (item !== undefined) {
+        ;(filesCategory.items[0] as SidebarCategoryItem).items.push(item)
+      }
+    }
+
+    if (indicesSet.has('all')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'All',
+        id: `${this.workspace.sidebarBaseId}indices/files/all`,
+      })
+    }
+
+    if (indicesSet.has('concepts')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Concepts',
+        id: `${this.workspace.sidebarBaseId}indices/files/concepts`,
+      })
+    }
+
+    if (indicesSet.has('classes')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Classes',
+        id: `${this.workspace.sidebarBaseId}indices/files/classes`,
+      })
+    }
+
+    if (indicesSet.has('namespaces')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Namespaces',
+        id: `${this.workspace.sidebarBaseId}indices/files/namespaces`,
+      })
+    }
+
+    if (indicesSet.has('functions')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Functions',
+        id: `${this.workspace.sidebarBaseId}indices/files/functions`,
+      })
+    }
+
+    if (indicesSet.has('variables')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Variables',
+        id: `${this.workspace.sidebarBaseId}indices/files/variables`,
+      })
+    }
+
+    if (indicesSet.has('typedefs')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Typedefs',
+        id: `${this.workspace.sidebarBaseId}indices/files/typedefs`,
+      })
+    }
+
+    if (indicesSet.has('enums')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Enums',
+        id: `${this.workspace.sidebarBaseId}indices/files/enums`,
+      })
+    }
+
+    if (indicesSet.has('enumvalues')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Enum Values',
+        id: `${this.workspace.sidebarBaseId}indices/files/enumvalues`,
+      })
+    }
+
+    if (indicesSet.has('defines')) {
+      filesCategory.items.push({
+        type: 'doc',
+        label: 'Macro Definitions',
+        id: `${this.workspace.sidebarBaseId}indices/files/defines`,
+      })
+    }
+
+    sidebarCategory.items.push(filesCategory)
+  }
+
+  /**
+   * Creates sidebar items for folder hierarchies recursively.
+   *
+   * @remarks
+   * Generates hierarchical sidebar structures for folder trees,
+   * creating category items with nested children for subfolders
+   * and files. Processes folders first, then files within each
+   * folder level.
+   *
+   * @param folder - The folder to create sidebar items for
+   * @returns The sidebar category item or undefined if folder lacks data
+   */
+  private createFolderSidebarItemRecursively(
+    folder: Folder
+  ): SidebarItem | undefined {
+    if (folder.sidebarLabel === undefined || folder.sidebarId == undefined) {
+      return undefined
+    }
+
+    const categoryItem: SidebarCategoryItem = {
+      type: 'category',
+      label: folder.sidebarLabel,
+      link: {
+        type: 'doc',
+        id: `${this.workspace.sidebarBaseId}${folder.sidebarId}`,
+      },
+      className: 'doxyEllipsis',
+      collapsed: true,
+      items: [],
+    }
+
+    for (const fileOrFolder of folder.children) {
+      if (fileOrFolder instanceof Folder) {
+        const item = this.createFolderSidebarItemRecursively(fileOrFolder)
+        if (item !== undefined) {
+          categoryItem.items.push(item)
+        }
+      }
+    }
+
+    for (const fileOrFolder of folder.children) {
+      if (fileOrFolder instanceof File) {
+        const item = this.createFileSidebarItem(fileOrFolder)
+        if (item !== undefined) {
+          categoryItem.items.push(item)
+        }
+      }
+    }
+
+    return categoryItem
+  }
+
+  /**
+   * Creates a sidebar document item for a file.
+   *
+   * @remarks
+   * Generates a simple document sidebar item for individual files
+   * with appropriate CSS classes and navigation links. Used for
+   * leaf nodes in the file hierarchy sidebar.
+   *
+   * @param file - The file to create a sidebar item for
+   * @returns The sidebar document item or undefined if file lacks data
+   */
+  private createFileSidebarItem(file: File): SidebarItem | undefined {
+    if (file.sidebarLabel === undefined || file.sidebarId === undefined) {
+      return undefined
+    }
+
+    const docItem: SidebarDocItem = {
+      type: 'doc',
+      label: file.sidebarLabel,
+      className: 'doxyEllipsis',
+      id: `${this.workspace.sidebarBaseId}${file.sidebarId}`,
+    }
+    return docItem
+  }
+
+  // --------------------------------------------------------------------------
+
+  override createNavbarItems(): NavbarItem[] {
+    const navbarItem: NavbarItem = {
+      label: 'Files',
+      to: `${this.workspace.menuBaseUrl}files/`,
+    }
+    return [navbarItem]
+  }
+
+  // --------------------------------------------------------------------------
+
+  override async generateIndexDotMdFile(): Promise<void> {
+    if (this.topLevelFolders.length === 0 && this.topLevelFiles.length === 0) {
+      return
+    }
+
+    const filePath = `${this.workspace.outputFolderPath}indices/files/index.md`
+    const permalink = 'files'
+
+    const frontMatter: FrontMatter = {
+      title: 'Files & Folders',
+      slug: `${this.workspace.slugBaseUrl}${permalink}`,
+      description:
+        'The files and folders that contributed content to this site',
+      custom_edit_url: null,
+      keywords: ['doxygen', 'files', 'folders', 'reference'],
+    }
+
+    const contentLines: string[] = []
+    for (const folder of this.topLevelFolders) {
+      contentLines.push(...this.generateIndexMdFileRecursively(folder, 0))
+    }
+
+    for (const file of this.topLevelFiles) {
+      contentLines.push(...this.generateFileIndexMd(file, 0))
+    }
+
+    if (contentLines.length === 0) {
+      return
+    }
+
+    const lines: string[] = []
+
+    lines.push('The files & folders that contributed content to this site are:')
+
+    lines.push(...this.workspace.renderTreeTableToHtmlLines({ contentLines }))
+
+    if (this.workspace.options.verbose) {
+      console.log(`Writing files index file '${filePath}'...`)
+    }
+
+    await this.workspace.writeOutputMdFile({
+      filePath,
+      frontMatter,
+      bodyLines: lines,
+    })
+  }
+
+  /**
+   * Generates hierarchical index content for folders recursively.
+   *
+   * @remarks
+   * Creates HTML tree table rows for folder hierarchies with proper
+   * indentation and folder icons. Processes subfolders first, then
+   * files within each folder level to maintain organised structure.
+   *
+   * @param folder - The folder to generate index content for
+   * @param depth - The current depth level in the hierarchy (0-based)
+   * @returns Array of HTML strings representing the tree table rows
+   */
+  private generateIndexMdFileRecursively(
+    folder: Folder,
+    depth: number
+  ): string[] {
+    // console.log(util.inspect(folder, { compact: false, depth: 999 }))
+
+    const lines: string[] = []
+
+    const label = this.workspace.renderString(folder.compoundName, 'html')
+
+    const permalink = this.workspace.getPagePermalink(folder.id)
+    if (permalink === undefined || permalink.length === 0) {
+      // console.log(namespace)
+      return []
+    }
+
+    let description = ''
+    if (
+      folder.briefDescriptionHtmlString !== undefined &&
+      folder.briefDescriptionHtmlString.length > 0
+    ) {
+      description = folder.briefDescriptionHtmlString.replace(/[.]$/, '')
+    }
+
+    lines.push('')
+    lines.push(
+      ...this.workspace.renderTreeTableRowToHtmlLines({
+        itemIconClass: 'doxyIconFolder',
+        itemLabel: label,
+        itemLink: permalink,
+        depth,
+        description,
+      })
+    )
+
+    if (folder.children.length > 0) {
+      for (const childFileOrFolder of folder.children) {
+        if (childFileOrFolder instanceof Folder) {
+          lines.push(
+            ...this.generateIndexMdFileRecursively(childFileOrFolder, depth + 1)
+          )
+        }
+      }
+
+      for (const childFileOrFolder of folder.children) {
+        if (childFileOrFolder instanceof File) {
+          lines.push(...this.generateFileIndexMd(childFileOrFolder, depth + 1))
+        }
+      }
+    }
+
+    return lines
+  }
+
+  /**
+   * Generates index content for individual files.
+   *
+   * @remarks
+   * Creates HTML tree table rows for file entries with appropriate
+   * file icons, labels, and descriptions. Generates consistent
+   * formatting for file documentation links within hierarchical
+   * index structures.
+   *
+   * @param file - The file to generate index content for
+   * @param depth - The current depth level in the hierarchy (0-based)
+   * @returns Array of HTML strings representing the file table row
+   */
+  private generateFileIndexMd(file: File, depth: number): string[] {
+    // console.log(util.inspect(file, { compact: false, depth: 999 }))
+    const lines: string[] = []
+
+    const label = this.workspace.renderString(file.compoundName, 'html')
+
+    const permalink = this.workspace.getPagePermalink(file.id, true)
+    if (permalink === undefined || permalink.length === 0) {
+      return []
+    }
+
+    let description = ''
+    if (
+      file.briefDescriptionHtmlString !== undefined &&
+      file.briefDescriptionHtmlString.length > 0
+    ) {
+      description = file.briefDescriptionHtmlString.replace(/[.]$/, '')
+    }
+
+    lines.push('')
+    lines.push(
+      ...this.workspace.renderTreeTableRowToHtmlLines({
+        itemIconClass: 'doxyIconFile',
+        itemLabel: label,
+        itemLink: permalink,
+        depth,
+        description,
+      })
+    )
+
+    return lines
+  }
+
+  override isVisibleInSidebar(): boolean {
+    for (const [, compound] of this.collectionCompoundsById) {
+      if (compound instanceof File && compound.hasAnyContent()) {
+        return true
+      } else if (compound instanceof Folder && compound.children.length > 0) {
+        return true
+      }
+    }
+    console.log('none')
+    return false
+  }
+
+  override async generatePerInitialsIndexMdFiles(): Promise<void> {
+    if (this.topLevelFiles.length === 0) {
+      return
+    }
+
+    const allUnorderedEntriesMap = new Map<string, TreeEntryBase>()
+
+    for (const [, compound] of this.collectionCompoundsById) {
+      if (!(compound instanceof File)) {
+        continue
+      }
+
+      if (compound.innerCompounds !== undefined) {
+        if (this.workspace.options.debug) {
+          console.log(
+            compound.indexName,
+            Array.from(compound.innerCompounds.keys())
+          )
+        }
+        const conceptCompoundDef = compound.innerCompounds.get('innerConcepts')
+        if (conceptCompoundDef?.innerConcepts !== undefined) {
+          for (const innerConcept of conceptCompoundDef.innerConcepts) {
+            // console.log(innerConcept.refid)
+            const compoundConcept = this.workspace.viewModel.compoundsById.get(
+              innerConcept.refid
+            )
+            if (compoundConcept instanceof Concept) {
+              const conceptEntry = new FileTreeEntry(compoundConcept, compound)
+              allUnorderedEntriesMap.set(conceptEntry.id, conceptEntry)
+            }
+          }
+        }
+        const classCompoundDef = compound.innerCompounds.get('innerClasses')
+        if (classCompoundDef?.innerClasses !== undefined) {
+          for (const innerClass of classCompoundDef.innerClasses) {
+            // console.log(innerClass.refid)
+            const compoundClass = this.workspace.viewModel.compoundsById.get(
+              innerClass.refid
+            )
+            if (compoundClass instanceof Class) {
+              const classEntry = new FileTreeEntry(compoundClass, compound)
+              allUnorderedEntriesMap.set(classEntry.id, classEntry)
+            }
+          }
+        }
+        const namespaceCompoundDef =
+          compound.innerCompounds.get('innerNamespaces')
+        if (namespaceCompoundDef?.innerNamespaces !== undefined) {
+          for (const innerNamespace of namespaceCompoundDef.innerNamespaces) {
+            // console.log(innerNamespace.refid)
+            const compoundNamespace =
+              this.workspace.viewModel.compoundsById.get(innerNamespace.refid)
+            if (compoundNamespace instanceof Namespace) {
+              const namespaceEntry = new FileTreeEntry(
+                compoundNamespace,
+                compound
+              )
+              allUnorderedEntriesMap.set(namespaceEntry.id, namespaceEntry)
+            }
+          }
+        }
+      }
+
+      for (const section of compound.sections) {
+        for (const member of section.definitionMembers) {
+          const memberEntry = new FileTreeEntry(member, compound)
+          allUnorderedEntriesMap.set(memberEntry.id, memberEntry)
+          if (member.enumValues !== undefined) {
+            for (const enumValue of member.enumValues) {
+              const enumValueEntry = new FileTreeEntry(enumValue, compound)
+              allUnorderedEntriesMap.set(enumValueEntry.id, enumValueEntry)
+            }
+          }
+        }
+      }
+    }
+
+    // ------------------------------------------------------------------------
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'all',
+      title: 'Files Definitions Index',
+      description: 'The definitions part of the files are:',
+      map: allUnorderedEntriesMap,
+      // eslint-disable-next-line @typescript-eslint/no-unused-vars
+      filter: (kind) => true,
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'concepts',
+      title: 'Files Concepts Index',
+      description: 'The concepts defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'concept',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'classes',
+      title: 'Files Classes Index',
+      description: 'The classes, structs, unions defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) =>
+        kind === 'class' || kind === 'struct' || kind === 'union',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'namespaces',
+      title: 'Files Namespaces Index',
+      description: 'The namespaces defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'namespace',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'functions',
+      title: 'Files Functions Index',
+      description: 'The functions defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'function',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'variables',
+      title: 'Files Variables Index',
+      description: 'The variables defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'variable',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'typedefs',
+      title: 'Files Type Definitions Index',
+      description: 'The typedefs defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'typedef',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'enums',
+      title: 'Files Enums Index',
+      description: 'The enums defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'enum',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'enumvalues',
+      title: 'Files Enum Values Index',
+      description: 'The enum values defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'enumvalue',
+    })
+
+    await this.generateIndexFile({
+      group: 'files',
+      fileKind: 'defines',
+      title: 'Files Macro Definitions Index',
+      description: 'The macros defined in the project are:',
+      map: allUnorderedEntriesMap,
+      filter: (kind) => kind === 'define',
+    })
+  }
+}
+
+// ----------------------------------------------------------------------------
+
+/**
+ * Represents a folder compound for directory documentation.
+ *
+ * @remarks
+ * Manages folder-specific functionality including child file and folder
+ * tracking, hierarchy construction, and documentation generation. Provides
+ * structured organisation for file system hierarchies within the
+ * documentation.
+ *
+ * @public
+ */
+export class Folder extends CompoundBase {
+  /** Array of child file identifiers contained in this folder. */
+  childrenFileIds: string[] = []
+
+  /** Array of child folder identifiers contained in this folder. */
+  childrenFolderIds: string[] = []
+
+  /** Relative path from root to this folder. */
+  relativePath = ''
+
+  // --------------------------------------------------------------------------
+
+  /**
+   * Creates a new Folder instance from compound definition data.
+   *
+   * @remarks
+   * Initialises folder metadata including child file and folder
+   * references, display labels, and page titles. Sets up the
+   * folder structure for hierarchy construction and documentation
+   * generation.
+   *
+   * @param collection - The parent FilesAndFolders collection
+   * @param compoundDef - The Doxygen compound definition for the folder
+   */
+  constructor(collection: FilesAndFolders, compoundDef: CompoundDefDataModel) {
+    super(collection, compoundDef)
+
+    // console.log('folder:', util.inspect(compoundDef))
+    // console.log('folder:', compoundDef.compoundName)
+
+    if (Array.isArray(compoundDef.innerDirs)) {
+      for (const ref of compoundDef.innerDirs) {
+        // console.log(
+        //   'component', compoundDef.id, 'has child folder', ref.refid
+        // )
+        this.childrenIds.push(ref.refid)
+        this.childrenFolderIds.push(ref.refid)
+      }
+    }
+
+    if (Array.isArray(compoundDef.innerFiles)) {
+      for (const ref of compoundDef.innerFiles) {
+        // console.log('component', compoundDef.id, 'has child file', ref.refid)
+        this.childrenIds.push(ref.refid)
+        this.childrenFileIds.push(ref.refid)
+      }
+    }
+
+    const { compoundName } = compoundDef
+    this.sidebarLabel = compoundName
+    this.indexName = compoundName
+    this.treeEntryName = compoundName
+
+    this.pageTitle = `\`${this.sidebarLabel}\` Folder`
+
+    this.createSections()
+  }
+
+  /**
+   * Determines if the folder has any children worth displaying.
+   *
+   * @remarks
+   * Recursively checks for files or non-empty subfolders to determine
+   * if the folder should be included in documentation. Empty folders
+   * without content are typically excluded from navigation.
+   *
+   * @returns True if the folder contains files or non-empty subfolders
+   */
+  hasChildren(): boolean {
+    for (const child of this.children) {
+      if (child instanceof File) {
+        return true
+      } else if (child instanceof Folder && child.hasChildren()) {
+        return true
+      }
+    }
+
+    return false
+  }
+
+  override hasAnyContent(): boolean {
+    // console.log('checking', this.compoundName)
+    if (this.hasChildren()) {
+      // console.log('has content children', this)
+      return true
+    }
+    // if (!super.hasAnyContent()) {
+    //   console.log('has no content', this)
+    // }
+    return super.hasAnyContent()
+  }
+
+  // --------------------------------------------------------------------------
+
+  /**
+   * Renders the complete folder documentation to markdown lines.
+   *
+   * @remarks
+   * Generates the full documentation page including brief descriptions,
+   * inner directory and file indices, member sections, and detailed
+   * descriptions. Creates structured folder documentation with proper
+   * navigation and content organisation.
+   *
+   * @param frontMatter - The frontmatter configuration for the page
+   * @returns Array of markdown strings representing the complete documentation
+   */
+  // eslint-disable-next-line @typescript-eslint/no-unused-vars
+  override renderToLines(frontMatter: FrontMatter): string[] {
+    const lines: string[] = []
+
+    const descriptionTodo = `@dir ${this.collection.workspace.renderString(
+      this.relativePath,
+      'html'
+    )}`
+
+    // The Description header is always shown.
+    const morePermalink = '#details'
+
+    lines.push(
+      this.renderBriefDescriptionToHtmlString({
+        briefDescriptionHtmlString: this.briefDescriptionHtmlString,
+        todo: descriptionTodo,
+        morePermalink,
+      })
+    )
+
+    lines.push(
+      ...this.renderInnerIndicesToLines({
+        suffixes: ['Dirs', 'Files'],
+      })
+    )
+
+    lines.push(...this.renderSectionIndicesToLines())
+
+    lines.push(
+      ...this.renderDetailedDescriptionToHtmlLines({
+        briefDescriptionHtmlString: this.briefDescriptionHtmlString,
+        detailedDescriptionHtmlLines: this.detailedDescriptionHtmlLines,
+        todo: descriptionTodo,
+        showHeader: true,
+        showBrief: !this.hasSect1InDescription,
+      })
+    )
+
+    lines.push(...this.renderSectionsToLines())
+
+    return lines
+  }
+
+  /**
+   * Performs late initialisation for folders with content validation.
+   *
+   * @remarks
+   * Validates folder content and conditionally disables sidebar generation for
+   * empty folders. This ensures that folders without meaningful documentation
+   * do not appear in the generated sidebar navigation.
+   *
+   * @public
+   */
+  override initializeLate(): void {
+    super.initializeLate()
+
+    const { workspace } = this.collection
+
+    // console.log(this)
+    if (!this.hasAnyContent()) {
+      if (!workspace.options.suggestToDoDescriptions) {
+        console.log(this.kind, this.compoundName, 'has no content, not shown')
+
+        this.sidebarId = undefined
+        this.sidebarLabel = undefined
+        this.relativePermalink = undefined
+
+        return
+      } else {
+        if (workspace.options.verbose) {
+          console.log(
+            this.kind,
+            this.compoundName,
+            'has no content, see the TODO description'
+          )
+        }
+      }
+    }
+  }
+}
+
+// ----------------------------------------------------------------------------
+
+/**
+ * Represents a file compound for source code documentation.
+ *
+ * @remarks
+ * Manages file-specific functionality including program listings,
+ * line number tracking, and source code documentation generation.
+ * Provides structured representation of source files within the
+ * documentation hierarchy.
+ *
+ * @public
+ */
+export class File extends CompoundBase {
+  /** Relative path from root to this file. */
+  relativePath = ''
+
+  /** Set of line numbers available in the program listing. */
+  listingLineNumbers = new Set<number>()
+
+  /** Program listing data for source code display. */
+  programListing: ProgramListingDataModel | undefined
+
+  /**
+   * Creates a new File instance from compound definition data.
+   *
+   * @remarks
+   * Initialises file metadata including display labels, page titles,
+   * and member sections. Sets up the file structure for documentation
+   * generation and source code listing display.
+   *
+   * @param collection - The parent FilesAndFolders collection
+   * @param compoundDef - The Doxygen compound definition for the file
+   */
+  constructor(collection: FilesAndFolders, compoundDef: CompoundDefDataModel) {
+    super(collection, compoundDef)
+
+    // console.log('file:', compoundDef.compoundName)
+
+    // The compoundName is the actual file name, without path.
+    const { compoundName } = compoundDef
+    assert(compoundName.length > 0)
+    this.sidebarLabel = compoundName
+    this.indexName = compoundName
+    this.treeEntryName = compoundName
+
+    this.pageTitle = `\`${this.sidebarLabel}\` File`
+
+    this.createSections()
+  }
+
+  /**
+   * Performs late initialisation for files with program listing setup.
+   *
+   * @remarks
+   * Processes the program listing for source code rendering and tracks valid
+   * line numbers for link validation. Also validates file content and
+   * conditionally disables sidebar generation for empty files.
+   *
+   * @public
+   */
+  override initializeLate(): void {
+    super.initializeLate()
+
+    const compoundDef = this._private._compoundDef
+    assert(compoundDef !== undefined)
+
+    const { programListing } = compoundDef
+    this.programListing = programListing
+
+    if (this.collection.workspace.options.renderProgramListing) {
+      // Keep track of line number, since not all lines referred exist and
+      // this might result in broken links.
+      if (this.programListing?.codelines !== undefined) {
+        for (const codeline of this.programListing.codelines) {
+          if (codeline.lineno !== undefined) {
+            this.listingLineNumbers.add(codeline.lineno.valueOf())
+          }
+        }
+      }
+    }
+
+    const { workspace } = this.collection
+
+    // console.log(this)
+    if (!this.hasAnyContent()) {
+      if (!workspace.options.suggestToDoDescriptions) {
+        console.log(this.kind, this.compoundName, 'has no content, not shown')
+
+        this.sidebarId = undefined
+        this.sidebarLabel = undefined
+        this.relativePermalink = undefined
+
+        return
+      } else {
+        if (workspace.options.verbose) {
+          console.log(
+            this.kind,
+            this.compoundName,
+            'has no content, see the TODO description'
+          )
+        }
+      }
+    }
+  }
+
+  /**
+   * Determines if the file has any documentable content.
+   *
+   * @remarks
+   * Checks for children elements, inner compounds, and include relationships
+   * to determine content availability. This method helps filter empty files
+   * from the generated documentation.
+   *
+   * @returns True if the file contains documentable content, false otherwise.
+   *
+   * @public
+   */
+  override hasAnyContent(): boolean {
+    // console.log('checking', this.compoundName)
+    if (this.childrenIds.length > 0) {
+      // console.log('has content childrenIds', this)
+      return true
+    }
+    if (this.children.length > 0) {
+      // console.log('has content children.length', this)
+      return true
+    }
+    if (this.innerCompounds !== undefined) {
+      // console.log('has content innerCompounds', this)
+      return true
+    }
+    if (this.includes !== undefined) {
+      // console.log('has content includes', this)
+      return true
+    }
+
+    // if (this.collection.workspace.options.renderProgramListing) {
+    //   if (this.programListing !== undefined) {
+    //     return true
+    //   }
+    // }
+
+    return super.hasAnyContent()
+  }
+
+  // --------------------------------------------------------------------------
+
+  /**
+   * Renders the file documentation to Markdown lines.
+   *
+   * @remarks
+   * Generates comprehensive file documentation including brief description,
+   * includes index, inner compound indices, section indices, detailed
+   * description, and optionally the program listing. The output follows
+   * Docusaurus conventions for file documentation pages.
+   *
+   * @param frontMatter - The front matter configuration for the page
+   * @returns Array of Markdown lines representing the file documentation
+   *
+   * @public
+   */
+  // eslint-disable-next-line @typescript-eslint/no-unused-vars
+  override renderToLines(frontMatter: FrontMatter): string[] {
+    const lines: string[] = []
+
+    const descriptionTodo = `@file ${this.collection.workspace.renderString(
+      this.relativePath,
+      'html'
+    )}`
+
+    // The Description header is always shown.
+    const morePermalink = '#details'
+
+    lines.push(
+      this.renderBriefDescriptionToHtmlString({
+        briefDescriptionHtmlString: this.briefDescriptionHtmlString,
+        todo: descriptionTodo,
+        morePermalink,
+      })
+    )
+
+    lines.push(...this.renderIncludesIndexToLines())
+
+    lines.push(
+      ...this.renderInnerIndicesToLines({
+        suffixes: ['Namespaces', 'Classes', 'Concepts'],
+      })
+    )
+
+    // TODO: render Concepts Index
+    // For now the xml does not include the necessary information to do so,
+    // since the inner compounds only include namespaces and classes, but
+    // not concepts. This would require changes in the XML generation in
+    // Doxygen.
+
+    lines.push(...this.renderSectionIndicesToLines())
+
+    lines.push(
+      ...this.renderDetailedDescriptionToHtmlLines({
+        briefDescriptionHtmlString: this.briefDescriptionHtmlString,
+        detailedDescriptionHtmlLines: this.detailedDescriptionHtmlLines,
+        todo: descriptionTodo,
+        showHeader: true,
+        showBrief: !this.hasSect1InDescription,
+      })
+    )
+
+    lines.push(...this.renderSectionsToLines())
+
+    if (
+      this.programListing !== undefined &&
+      this.collection.workspace.options.renderProgramListing
+    ) {
+      lines.push('')
+      lines.push('## File Listing')
+
+      lines.push('')
+      lines.push('The file content with the documentation metadata removed is:')
+
+      lines.push(
+        ...this.collection.workspace.renderElementToLines(
+          this.programListing,
+          'html'
+        )
+      )
+    }
+
+    return lines
+  }
+}
+
+// ----------------------------------------------------------------------------