@xopcai/xopc 0.0.112 → 0.0.114

package/dist/src/agent/agent-manager.js

@@ -14,6 +14,7 @@ import { resolveEffectiveAgentProfile, resolveEffectiveAgentProfileForSession }
 import { extractTextContent, loadProfileMarkdownFiles } from "./context/workspace.js";
 import { clearBootstrapSnapshot } from "./bootstrap/bootstrap-cache.js";
 import { resolveBootstrapContextSync } from "./bootstrap/bootstrap-files.js";
+import { loadProjectAgentsContextFile } from "./bootstrap/project-agents-context.js";
 import { createSkillConfigManager, isSkillEnabled, resolveSkillConfig } from "./skills/config.js";
 import { isMemorySubsystemEnabled, shouldRegisterCuratedMemoryTool } from "./memory/memory-config.js";
 import { AgentToolsFactory } from "./tools/factory.js";
@@ -29,6 +30,7 @@ import { WorkspaceRuntimeRegistry } from "./workspace-runtime/registry.js";
 import { BackgroundReviewCoordinator } from "./background-review/coordinator.js";
 import { maybeRequestChannelExecApproval } from "../channels/exec-approval-runtime.js";
 import { SkillFilesystemWatcher } from "./skills/filesystem-watcher.js";
+import { ProjectTrustStore, hasTrustRequiringProjectResources } from "../project-trust/trust-store.js";
 import { basename, resolve, sep } from "node:path";
 import { Agent } from "@earendil-works/pi-agent-core";
 //#region src/agent/agent-manager.ts
@@ -71,6 +73,7 @@ var AgentManager = class {
 	lastExplicitSkillDiskRefreshAt = 0;
 	skillsUpdatedTimer;
 	pendingSkillsUpdatedReason;
+	projectTrustStore = new ProjectTrustStore();
 	constructor(config) {
 		this.config = config;
 		this.baseWorkspacePath = this.computeBaseWorkspacePath();
@@ -121,6 +124,13 @@ var AgentManager = class {
 		if (fromMap !== void 0) return fromMap;
 		return resolveEffectiveAgentProfileForSession(cfg, sessionKey).resolvedWorkspacePath;
 	}
+	getWorkspaceRuntimeForSession(sessionKey) {
+		const resolvedPath = sessionKey ? this.getResolvedWorkspaceForSession(sessionKey) : this.baseWorkspacePath;
+		return this.workspaceRuntimes.getOrCreate(resolvedPath);
+	}
+	getCurrentWorkspaceRuntime() {
+		return this.getWorkspaceRuntimeForSession(this.config.getCurrentContext?.()?.sessionKey);
+	}
 	/**
 	* Sync in-memory workspace override from session config (after load or PATCH).
 	* Pass `null` to clear when the session has no `workingDirectoryOverride` on disk.
@@ -184,8 +194,8 @@ var AgentManager = class {
 			bus: this.config.bus,
 			getConfig: () => this.mergedConfig(),
 			getPrimaryModel: () => this.resolveModelStringToModel(this.pickDefaultModelRef()),
-			getBuiltinMemoryStore: () => this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).builtinMemoryStore,
-			getMemoryManager: () => this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).memoryManager,
+			getBuiltinMemoryStore: () => this.getCurrentWorkspaceRuntime().builtinMemoryStore,
+			getMemoryManager: () => this.getCurrentWorkspaceRuntime().memoryManager,
 			getSessionStore: this.config.getSessionStore,
 			gatewayClarify: this.config.gatewayClarify,
 			getCronService: this.config.getCronService,
@@ -218,11 +228,10 @@ var AgentManager = class {
 		};
 	}
 	getMemoryManager() {
-		return this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).memoryManager;
+		return this.getCurrentWorkspaceRuntime().memoryManager;
 	}
 	getMemoryManagerForSession(sessionKey) {
-		const path = this.getResolvedWorkspaceForSession(sessionKey);
-		return this.workspaceRuntimes.getOrCreate(path).memoryManager;
+		return this.getWorkspaceRuntimeForSession(sessionKey).memoryManager;
 	}
 	/**
 	* Prefix the user turn with fenced prefetched memory (external providers).
@@ -259,9 +268,9 @@ var AgentManager = class {
 			agent: inst.agent,
 			registeredToolNames: inst.registeredToolNames,
 			skillAllowlist: inst.effectiveProfile.skillsAllowlist,
-			workspacePath: inst.resolvedWorkspacePath,
+			workspacePath: this.getResolvedWorkspaceForSession(sessionKey),
 			lastAssistantText: this.getLastAssistantContent(sessionKey),
-			workspaceRuntime: this.workspaceRuntimes.getOrCreate(inst.resolvedWorkspacePath)
+			workspaceRuntime: this.getWorkspaceRuntimeForSession(sessionKey)
 		});
 	}
 	/**
@@ -269,16 +278,15 @@ var AgentManager = class {
 	*/
 	expandSkillUserText(text) {
 		const sessionKey = (this.config.getCurrentContext?.())?.sessionKey;
-		const path = sessionKey ? this.getResolvedWorkspaceForSession(sessionKey) : this.baseWorkspacePath;
 		const inst = sessionKey ? this.agents.get(sessionKey) : void 0;
-		return this.workspaceRuntimes.getOrCreate(path).skillManager.expandCommand(text, {
+		return this.getWorkspaceRuntimeForSession(sessionKey).skillManager.expandCommand(text, {
 			skillAllowlist: inst?.effectiveProfile.skillsAllowlist,
 			registeredToolNames: inst?.registeredToolNames
 		});
 	}
 	/** Structured SKILL.md preview for the gateway console. */
 	getSkillMarkdownSource(skillName) {
-		const skill = this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).skillManager.findSkill(skillName);
+		const skill = this.getCurrentWorkspaceRuntime().skillManager.findSkill(skillName);
 		if (!skill) return null;
 		return {
 			name: skill.name,
@@ -294,6 +302,23 @@ var AgentManager = class {
 		const cfg = this.config.config;
 		return loadProfileMarkdownFiles(resolveAgentProfileDir(cfg, profile.agentId));
 	}
+	isProjectWorkspaceTrusted(workspaceDir) {
+		if (!hasTrustRequiringProjectResources(workspaceDir)) return false;
+		const persisted = this.projectTrustStore.get(workspaceDir);
+		if (persisted === false) return false;
+		if (persisted === true) return true;
+		try {
+			return this.config.isWorkspaceTrusted?.(workspaceDir) === true;
+		} catch (err) {
+			const errorMessage = err instanceof Error ? err.message : String(err);
+			log.warn({
+				err,
+				workspaceDir,
+				errorMessage
+			}, `Workspace trust override failed: ${errorMessage}`);
+			return false;
+		}
+	}
 	resolveContextFilesForSession(sessionKey, profile, excludeHeartbeat) {
 		const cfg = this.config.config;
 		const profileDir = resolveAgentProfileDir(cfg, profile.agentId);
@@ -306,6 +331,12 @@ var AgentManager = class {
 			excludeHeartbeat: excludeHeartbeat ?? !heartbeatEnabled,
 			contextInjection
 		});
+		const shouldAppendProjectContext = contextInjection === "always" || contextInjection === "continuation-skip" && contextFiles.length > 0;
+		const workspaceDir = this.getResolvedWorkspaceForSession(sessionKey);
+		if (shouldAppendProjectContext && this.isProjectWorkspaceTrusted(workspaceDir)) {
+			const projectAgentsFile = loadProjectAgentsContextFile(workspaceDir);
+			if (projectAgentsFile) contextFiles.push(projectAgentsFile);
+		}
 		return contextFiles;
 	}
 	skillCatalogEntryFromSkill(s, skillsConfig = createSkillConfigManager(resolveStateDir()).load(), lock = loadSkillsLock()) {
@@ -334,7 +365,7 @@ var AgentManager = class {
 	getSkillCatalogSnapshot() {
 		const skillsConfig = createSkillConfigManager(resolveStateDir()).load();
 		const lock = loadSkillsLock();
-		const rt = this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath);
+		const rt = this.getCurrentWorkspaceRuntime();
 		return {
 			catalog: rt.skillManager.getSkills().map((s) => this.skillCatalogEntryFromSkill(s, skillsConfig, lock)),
 			version: rt.skillManager.getVersion(),
@@ -387,15 +418,16 @@ var AgentManager = class {
 			touched.add(resolvedPath);
 		}
 		for (const instance of this.agents.values()) {
-			const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);
-			if (!touched.has(instance.resolvedWorkspacePath)) {
+			const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(instance.sessionKey);
+			const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);
+			if (!touched.has(resolvedWorkspacePath)) {
 				rt.skillManager.refreshPromptFromConfig();
-				touched.add(instance.resolvedWorkspacePath);
+				touched.add(resolvedWorkspacePath);
 			}
 			const contextFiles = this.resolveContextFilesForSession(instance.sessionKey, instance.effectiveProfile);
 			const newPrompt = rt.systemPromptBuilder.build(contextFiles, {
 				externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),
-				workspaceOverride: instance.resolvedWorkspacePath,
+				workspaceOverride: resolvedWorkspacePath,
 				profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),
 				systemPromptOverride: instance.effectiveProfile.systemPromptOverride,
 				skillAllowlist: instance.effectiveProfile.skillsAllowlist,
@@ -452,12 +484,13 @@ var AgentManager = class {
 		for (const rt of this.workspaceRuntimes.values()) rt.skillManager.reload();
 		const touched = /* @__PURE__ */ new Set();
 		for (const instance of this.agents.values()) {
-			const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);
-			if (!touched.has(instance.resolvedWorkspacePath)) touched.add(instance.resolvedWorkspacePath);
+			const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(instance.sessionKey);
+			const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);
+			if (!touched.has(resolvedWorkspacePath)) touched.add(resolvedWorkspacePath);
 			const contextFiles = this.resolveContextFilesForSession(instance.sessionKey, instance.effectiveProfile);
 			const newPrompt = rt.systemPromptBuilder.rebuild(contextFiles, {
 				externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),
-				workspaceOverride: instance.resolvedWorkspacePath,
+				workspaceOverride: resolvedWorkspacePath,
 				profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),
 				systemPromptOverride: instance.effectiveProfile.systemPromptOverride,
 				skillAllowlist: instance.effectiveProfile.skillsAllowlist,
@@ -572,13 +605,14 @@ var AgentManager = class {
 		const instance = this.agents.get(sessionKey);
 		if (!instance) return;
 		const cfg = this.config.config;
-		const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);
+		const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(sessionKey);
+		const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);
 		const contextFiles = this.resolveContextFilesForSession(sessionKey, instance.effectiveProfile);
 		const modelRef = instance.effectiveProfile.primaryModelRef?.trim() || this.defaultModel;
 		const thinkingLevel = instance.effectiveProfile.thinkingDefault ?? this.config.thinkingLevel ?? "medium";
 		instance.agent.state.systemPrompt = rt.systemPromptBuilder.build(contextFiles, {
 			externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),
-			workspaceOverride: instance.resolvedWorkspacePath,
+			workspaceOverride: resolvedWorkspacePath,
 			profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),
 			systemPromptOverride: instance.effectiveProfile.systemPromptOverride,
 			skillAllowlist: instance.effectiveProfile.skillsAllowlist,
@@ -743,12 +777,13 @@ var AgentManager = class {
 			const model = resolveModel(modelId);
 			instance.agent.state.model = model;
 			const cfg = this.config.config;
-			const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);
+			const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(sessionKey);
+			const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);
 			const contextFiles = this.resolveContextFilesForSession(sessionKey, instance.effectiveProfile);
 			const thinkingLevel = instance.agent.state.thinkingLevel ?? instance.effectiveProfile.thinkingDefault ?? this.config.thinkingLevel ?? "medium";
 			instance.agent.state.systemPrompt = rt.systemPromptBuilder.build(contextFiles, {
 				externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),
-				workspaceOverride: instance.resolvedWorkspacePath,
+				workspaceOverride: resolvedWorkspacePath,
 				profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),
 				systemPromptOverride: instance.effectiveProfile.systemPromptOverride,
 				skillAllowlist: instance.effectiveProfile.skillsAllowlist,

package/dist/src/agent/agent-manager.js.map

@@ -1 +1 @@
-{"version":3,"file":"agent-manager.js","names":[],"sources":["../../../src/agent/agent-manager.ts"],"sourcesContent":["/**\n * Agent Manager - Manages Agent instances per session\n *\n * Each session gets its own Agent instance for true isolation\n * and concurrent processing across sessions.\n */\n\nimport {\n  Agent,\n  type AgentMessage,\n  type AgentEvent,\n  type ThinkingLevel,\n} from '@earendil-works/pi-agent-core';\nimport type { Model, Api } from '@earendil-works/pi-ai';\nimport type { AgentInstanceGateway } from './agent-instance-gateway.js';\nimport { type Config, getAgentDefaultModelRef } from '../config/schema.js';\nimport { applyConfigOverrides } from '../config/runtime-overrides.js';\nimport { resolveAgentProfileDir } from './agent-scope.js';\nimport {\n  type EffectiveAgentProfile,\n  resolveEffectiveAgentProfile,\n  resolveEffectiveAgentProfileForSession,\n} from '../config/agent-profile.js';\nimport { expandWorkspacePathString } from '../config/workspace-path.js';\nimport type { ModelManager } from './models/manager.js';\nimport { createLogger } from '../utils/logger.js';\nimport { resolveProviderApiKeySync } from '../auth/sync-provider-auth.js';\nimport { resolveModel, getDefaultModelSync, getApiKeySync } from '../providers/index.js';\nimport { createExtensionAwareStreamFn } from '../providers/extension-stream-bridge.js';\nimport { CredentialResolver } from '../auth/credentials.js';\nimport { resolveBundledSkillsDir, resolveStateDir } from '../config/paths.js';\nimport { loadProfileMarkdownFiles, extractTextContent } from './context/workspace.js';\nimport { clearBootstrapSnapshot, resolveBootstrapContextSync } from './bootstrap/bootstrap-files.js';\nimport type { EmbeddedContextFile } from './bootstrap/types.js';\nimport { AgentToolsFactory } from './tools/factory.js';\nimport { parseMcpToolName } from './mcp/bundle-mcp-policy.js';\nimport {\n  disposeAllSessionMcpRuntimes,\n  retireSessionMcpRuntimeForSessionKey,\n} from './mcp/bundle-mcp-tools.js';\nimport { evictAllEmbeddedSessionRunners, evictEmbeddedSessionRunner } from './embedded/session-runner.js';\nimport type { GatewayClarifyRequestFn } from './tools/clarify-tool.js';\nimport type { ExtensionRegistryImpl as ExtensionRegistry } from '../extensions/index.js';\nimport type { MessageBus } from '../infra/bus/index.js';\nimport type { CronService } from '../cron/index.js';\nimport type { SessionStore } from '../session/store.js';\nimport { isValidSkillEnvVarName } from './skills/required-env-vars.js';\nimport type { SessionContext } from './session/session-context.js';\nimport type {\n  Skill,\n  SkillDiagnostic,\n  SkillMarkdownPreviewPayload,\n  SkillRuntimeStatus,\n} from './skills/types.js';\nimport { createSkillConfigManager, isSkillEnabled, resolveSkillConfig } from './skills/config.js';\nimport { isUnderManagedSkillsDir } from './skills/managed-store.js';\nimport { loadSkillsLock, type SkillHubLockEntry } from './skills/hub-lock.js';\nimport { basename, resolve, sep } from 'node:path';\n\nimport {\n  isMemorySubsystemEnabled,\n  shouldRegisterCuratedMemoryTool,\n} from './memory/memory-config.js';\nimport type { MemoryManager } from './memory/manager.js';\nimport { MemoryPrefetchCoordinator } from './memory/prefetch-coordinator.js';\nimport { WorkspaceRuntimeRegistry, type WorkspaceRuntime } from './workspace-runtime/registry.js';\nimport { BackgroundReviewCoordinator } from './background-review/coordinator.js';\nimport { maybeRequestChannelExecApproval } from '../channels/exec-approval-runtime.js';\nimport { SkillFilesystemWatcher } from './skills/filesystem-watcher.js';\n\nconst log = createLogger('AgentManager');\n\nexport interface SkillCatalogEntry {\n  directoryId: string;\n  name: string;\n  description: string;\n  category?: string;\n  source: Skill['source'];\n  path: string;\n  managed: boolean;\n  /** User toggle in ~/.xopc/skills.json (`entries[name].enabled`). Default true. */\n  enabled: boolean;\n  /** When true, skill is never injected into `<available_skills>` (SKILL.md frontmatter). */\n  disableModelInvocation: boolean;\n  /** Hub install provenance when under ~/.xopc/skills and listed in skills-lock.json. */\n  hub?: SkillHubLockEntry;\n}\n\nexport interface SkillCatalogRuntimeMeta {\n  version: string;\n  loadedAt: number;\n  diagnostics: SkillDiagnostic[];\n  status: SkillRuntimeStatus;\n}\n\nexport interface SkillCatalogSnapshot extends SkillCatalogRuntimeMeta {\n  catalog: SkillCatalogEntry[];\n}\n\nexport type AgentSkillUnavailableReason = 'agent-denied' | 'disabled' | 'requirements-unmet' | 'model-invocation-disabled';\n\nexport interface AgentSkillAvailabilityEntry extends SkillCatalogEntry {\n  availableForCurrentAgent: boolean;\n  unavailableReason: AgentSkillUnavailableReason | null;\n}\n\nexport interface AgentSkillAvailabilityPayload {\n  agentId: string;\n  version: string;\n  loadedAt: number;\n  diagnostics: SkillDiagnostic[];\n  status: SkillRuntimeStatus;\n  defaultsAllowlist?: string[];\n  agentAllowlist?: string[];\n  effectiveAllowlist?: string[];\n  skills: AgentSkillAvailabilityEntry[];\n}\n\nexport interface AgentManagerConfig {\n  workspace: string;\n  model?: string;\n  config?: Config;\n  extensionRegistry?: ExtensionRegistry;\n  hookRunner?: import('../extensions/index.js').ExtensionHookRunner;\n  bus: MessageBus;\n  getCurrentContext: () => SessionContext | null;\n  /** Session persistence (enables `session_search` when set). */\n  getSessionStore?: () => SessionStore;\n  /** Clears per-session profile default on teardown. */\n  getModelManager?: () => ModelManager;\n  // Thinking configuration\n  thinkingLevel?: ThinkingLevel;\n  reasoningLevel?: 'off' | 'on' | 'stream';\n  verboseLevel?: 'off' | 'on' | 'full';\n  gatewayClarify?: { requestClarification: GatewayClarifyRequestFn };\n  /** Gateway: exposes CronService for the `cronjob` tool. */\n  getCronService?: () => CronService | undefined;\n  /** Gateway: starts persisted workflow runs (dedicated chat session per run). */\n  getWorkflowRunService?: () => import('../workflows/service/workflow-run-service.types.js').WorkflowRunServiceLike | undefined;\n  /** Runtime notification for UI/CLI shells that cache skill catalogs. */\n  onSkillsUpdated?: (payload: { reason: 'disk' | 'config' }) => void;\n}\n\nexport interface AgentInstance {\n  agent: Agent;\n  sessionKey: string;\n  createdAt: number;\n  lastUsedAt: number;\n  effectiveProfile: EffectiveAgentProfile;\n  resolvedWorkspacePath: string;\n  /** Tool names registered on this agent (for skill indexing / tool gating). */\n  registeredToolNames: string[];\n  /** Declared env var names from skill_view; shell reads values from process.env at spawn time. */\n  skillEnvPassthroughKeys: Set<string>;\n}\n\n\nexport class AgentManager implements AgentInstanceGateway {\n  private agents = new Map<string, AgentInstance>();\n  private config: AgentManagerConfig;\n  private toolsFactory: AgentToolsFactory;\n\n  private mergedConfig(): Config | undefined {\n    const base = this.config.config;\n    return base ? applyConfigOverrides(base) : undefined;\n  }\n  /** Default agent workspace (effective profile for `getDefaultAgentId`). */\n  private baseWorkspacePath: string;\n  /** Per-session absolute markdown workspace when `SessionAgentConfig.workingDirectoryOverride` is set. */\n  private sessionWorkspaceOverrides = new Map<string, string>();\n  private defaultModel: string;\n  private credentialCache = new Map<string, string>();\n  private credentialResolver: CredentialResolver;\n  private workspaceRuntimes: WorkspaceRuntimeRegistry;\n  private memoryPrefetch: MemoryPrefetchCoordinator;\n  private backgroundReview: BackgroundReviewCoordinator;\n  private skillFilesystemWatcher: SkillFilesystemWatcher;\n  private skillDiskRefreshInProgress = false;\n  private skillDiskRefreshPending = false;\n  private lastExplicitSkillDiskRefreshAt = 0;\n  private skillsUpdatedTimer: NodeJS.Timeout | undefined;\n  private pendingSkillsUpdatedReason: 'disk' | 'config' | undefined;\n\n  constructor(config: AgentManagerConfig) {\n    this.config = config;\n    this.baseWorkspacePath = this.computeBaseWorkspacePath();\n    this.skillFilesystemWatcher = new SkillFilesystemWatcher({\n      onChange: (event) => {\n        log.info({ changedPath: event.changedPath }, 'Skill filesystem changed; refreshing skills');\n        this.refreshSkillsAfterDiskChange('watch');\n      },\n    });\n    this.skillFilesystemWatcher.refreshPrimaryWorkspace(this.baseWorkspacePath);\n    this.workspaceRuntimes = new WorkspaceRuntimeRegistry({\n      getConfig: () => this.config.config!,\n      bundledSkillsDir: resolveBundledSkillsDir(),\n      onRuntimeCreated: (resolvedPath) => {\n        this.skillFilesystemWatcher.watchWorkspace(resolvedPath);\n      },\n    });\n    this.memoryPrefetch = new MemoryPrefetchCoordinator({\n      getConfig: () => this.config.config,\n      getMemoryManagerForSession: (sk) => this.getMemoryManagerForSession(sk),\n      getLastAssistantContent: (sk) => this.getLastAssistantContent(sk),\n    });\n    this.backgroundReview = new BackgroundReviewCoordinator({\n      getConfig: () => this.mergedConfig(),\n      onSkillsFilesystemMutate: () => this.refreshSkillsAfterDiskChange('explicit'),\n    });\n    this.toolsFactory = new AgentToolsFactory(this.buildToolsFactoryDeps());\n\n    this.defaultModel = config.model || getDefaultModelSync(config.config);\n\n    this.credentialResolver = new CredentialResolver();\n    this.warmCredentialCache().catch((err) => {\n      const em = err instanceof Error ? err.message : String(err);\n      log.warn({ err, errorMessage: em }, `Credential cache pre-warm failed: ${em}`);\n    });\n  }\n\n  private computeBaseWorkspacePath(): string {\n    const cfg = this.config.config;\n    if (!cfg) {\n      return expandWorkspacePathString(this.config.workspace);\n    }\n    return resolveEffectiveAgentProfileForSession(cfg, null).resolvedWorkspacePath;\n  }\n\n  /**\n   * Workspace root for inbound attachments / side effects for this session's agent id.\n   * Uses in-memory session workspace overrides when the session has a persisted `workingDirectoryOverride`.\n   */\n  getResolvedWorkspaceForSession(sessionKey: string): string {\n    const cfg = this.config.config!;\n    const fromMap = this.sessionWorkspaceOverrides.get(sessionKey);\n    if (fromMap !== undefined) {\n      return fromMap;\n    }\n    return resolveEffectiveAgentProfileForSession(cfg, sessionKey).resolvedWorkspacePath;\n  }\n\n  /**\n   * Sync in-memory workspace override from session config (after load or PATCH).\n   * Pass `null` to clear when the session has no `workingDirectoryOverride` on disk.\n   */\n  setSessionWorkspaceOverride(sessionKey: string, absolutePath: string | null): void {\n    if (absolutePath === null || absolutePath === '') {\n      this.sessionWorkspaceOverrides.delete(sessionKey);\n    } else {\n      this.sessionWorkspaceOverrides.set(sessionKey, absolutePath);\n    }\n  }\n\n  /** Merged `thinkingDefault` for this session's agent id (defaults + `agents.list`). */\n  getThinkingDefaultForSession(\n    sessionKey: string,\n  ): import('./transcript/thinking-types.js').ThinkLevel | undefined {\n    const cfg = this.mergedConfig();\n    if (!cfg) {\n      return undefined;\n    }\n    return resolveEffectiveAgentProfileForSession(cfg, sessionKey).thinkingDefault;\n  }\n\n  private pickDefaultModelRef(): string {\n    const cfg = this.mergedConfig();\n    const ref = getAgentDefaultModelRef(cfg);\n    return ref?.trim() || getDefaultModelSync(cfg);\n  }\n\n  private resolveModelStringToModel(modelRef: string): Model<Api> {\n    try {\n      return resolveModel(modelRef);\n    } catch {\n      const fallback = getDefaultModelSync(this.mergedConfig());\n      log.warn({ modelRef, fallback }, 'Model not found, using default');\n      return resolveModel(fallback);\n    }\n  }\n\n  /**\n   * Keep defaults in sync when config is hot-reloaded or saved from the UI.\n   *\n   * The previous implementation rebuilt the entire `AgentToolsFactory` (80+ lines\n   * of dependency wiring) on every reload. The factory's deps are now built from\n   * a single helper ({@link buildToolsFactoryDeps}) and read `this.*` through\n   * closures, so existing instances automatically see the new config without\n   * reconstruction. The browser is still shut down because its cached settings\n   * (headless mode, backend choice) come from the config snapshot at connect time.\n   */\n  updateAgentDefaults(config: Config): void {\n    this.config.config = config;\n    const ref = getAgentDefaultModelRef(config);\n    this.config.model = ref;\n    this.defaultModel = ref || getDefaultModelSync(config);\n    this.baseWorkspacePath = this.computeBaseWorkspacePath();\n    this.skillFilesystemWatcher.refreshPrimaryWorkspace(this.baseWorkspacePath);\n    void this.toolsFactory.shutdownBrowser();\n    void this.workspaceRuntimes.clearAll();\n  }\n\n  /**\n   * Construct the dep bag passed to `AgentToolsFactory`. Closures reference\n   * `this.*` so they remain valid across hot reloads (no rebuild needed).\n   */\n  private buildToolsFactoryDeps(): ConstructorParameters<typeof AgentToolsFactory>[0] {\n    return {\n      workspace: this.baseWorkspacePath,\n      extensionRegistry: this.config.extensionRegistry,\n      getCurrentContext: this.config.getCurrentContext,\n      hookRunner: this.config.hookRunner,\n      bus: this.config.bus,\n      getConfig: () => this.mergedConfig(),\n      getPrimaryModel: () => this.resolveModelStringToModel(this.pickDefaultModelRef()),\n      getBuiltinMemoryStore: () =>\n        this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).builtinMemoryStore,\n      getMemoryManager: () =>\n        this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).memoryManager,\n      getSessionStore: this.config.getSessionStore,\n      gatewayClarify: this.config.gatewayClarify,\n      getCronService: this.config.getCronService,\n      getWorkflowRunService: this.config.getWorkflowRunService,\n      getSkillIndexingContext: () => {\n        const ctx = this.config.getCurrentContext?.();\n        if (!ctx?.sessionKey) return undefined;\n        const inst = this.agents.get(ctx.sessionKey);\n        if (!inst) return undefined;\n        return {\n          registeredToolNames: inst.registeredToolNames,\n          skillAllowlist: inst.effectiveProfile.skillsAllowlist,\n        };\n      },\n      onSkillsFilesystemMutate: () => {\n        this.refreshSkillsAfterDiskChange('explicit');\n      },\n      getSkillPassthroughEnvVarNames: () => {\n        const ctx = this.config.getCurrentContext?.();\n        if (!ctx?.sessionKey) return [];\n        return [...(this.agents.get(ctx.sessionKey)?.skillEnvPassthroughKeys ?? [])];\n      },\n      registerSkillEnvPassthrough: (names: string[]) => {\n        const ctx = this.config.getCurrentContext?.();\n        if (!ctx?.sessionKey) return;\n        const inst = this.agents.get(ctx.sessionKey);\n        if (!inst) return;\n        for (const n of names) {\n          if (isValidSkillEnvVarName(n)) {\n            inst.skillEnvPassthroughKeys.add(n.trim());\n          }\n        }\n      },\n    };\n  }\n\n  getMemoryManager(): MemoryManager {\n    return this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).memoryManager;\n  }\n\n  private getMemoryManagerForSession(sessionKey: string): MemoryManager {\n    const path = this.getResolvedWorkspaceForSession(sessionKey);\n    return this.workspaceRuntimes.getOrCreate(path).memoryManager;\n  }\n\n  /**\n   * Prefix the user turn with fenced prefetched memory (external providers).\n   * Delegates to {@link MemoryPrefetchCoordinator}.\n   */\n  applyMemoryPrefetchToUserMessage(\n    userMessage: AgentMessage,\n    sessionKey: string,\n  ): Promise<AgentMessage> {\n    return this.memoryPrefetch.applyToUserMessage(userMessage, sessionKey);\n  }\n\n  /**\n   * After a completed turn: sync external providers and queue next-turn prefetch.\n   * Delegates to {@link MemoryPrefetchCoordinator}.\n   */\n  afterAgentTurn(sessionKey: string, userPlainText: string): void {\n    this.memoryPrefetch.afterTurn(sessionKey, userPlainText);\n  }\n\n  /**\n   * Call once per user turn before the main `agent.prompt` (via {@link runAgentTurnWithModelFallbacks} `beforeUserPrompt`).\n   * Delegates to {@link BackgroundReviewCoordinator}.\n   */\n  beginBackgroundReviewUserTurn(sessionKey: string): void {\n    const inst = this.agents.get(sessionKey);\n    if (!inst) return;\n    this.backgroundReview.beginUserTurn(sessionKey, inst.registeredToolNames);\n  }\n\n  /**\n   * After a successful main turn (after memory sync via `afterAgentTurn`), may run a quiet follow-up for memory/skills.\n   * Delegates to {@link BackgroundReviewCoordinator}.\n   */\n  scheduleBackgroundReviewAfterUserTurn(sessionKey: string): void {\n    const inst = this.agents.get(sessionKey);\n    if (!inst) return;\n    this.backgroundReview.scheduleAfterUserTurn({\n      sessionKey,\n      agent: inst.agent,\n      registeredToolNames: inst.registeredToolNames,\n      skillAllowlist: inst.effectiveProfile.skillsAllowlist,\n      workspacePath: inst.resolvedWorkspacePath,\n      lastAssistantText: this.getLastAssistantContent(sessionKey),\n      workspaceRuntime: this.workspaceRuntimes.getOrCreate(inst.resolvedWorkspacePath),\n    });\n  }\n\n  /**\n   * Expand `/skill:name` user text into the full skill block for the current turn (WebChat, channels).\n   */\n  expandSkillUserText(text: string): string {\n    const ctx = this.config.getCurrentContext?.();\n    const sessionKey = ctx?.sessionKey;\n    const path = sessionKey\n      ? this.getResolvedWorkspaceForSession(sessionKey)\n      : this.baseWorkspacePath;\n    const inst = sessionKey ? this.agents.get(sessionKey) : undefined;\n    return this.workspaceRuntimes.getOrCreate(path).skillManager.expandCommand(text, {\n      skillAllowlist: inst?.effectiveProfile.skillsAllowlist,\n      registeredToolNames: inst?.registeredToolNames,\n    });\n  }\n\n  /** Structured SKILL.md preview for the gateway console. */\n  getSkillMarkdownSource(skillName: string): SkillMarkdownPreviewPayload | null {\n    const skill = this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath).skillManager.findSkill(skillName);\n    if (!skill) return null;\n\n    return {\n      name: skill.name,\n      description: skill.description,\n      bodyMarkdown: skill.content,\n      disableModelInvocation: skill.disableModelInvocation,\n      metadata: skill.metadata,\n      toolConditions: skill.toolConditions,\n      requiredEnvVarNames: skill.requiredEnvVarNames,\n    };\n  }\n\n  private loadProfileMarkdownForProfile(profile: EffectiveAgentProfile): ReturnType<typeof loadProfileMarkdownFiles> {\n    const cfg = this.config.config!;\n    const profileDir = resolveAgentProfileDir(cfg, profile.agentId);\n    return loadProfileMarkdownFiles(profileDir);\n  }\n\n  private resolveContextFilesForSession(\n    sessionKey: string,\n    profile: EffectiveAgentProfile,\n    excludeHeartbeat?: boolean,\n  ): EmbeddedContextFile[] {\n    const cfg = this.config.config!;\n    const profileDir = resolveAgentProfileDir(cfg, profile.agentId);\n    const heartbeatEnabled = cfg.gateway?.heartbeat?.includeSystemPromptSection ?? false;\n    const contextInjection = cfg.agents?.defaults?.contextInjection ?? 'always';\n    const { contextFiles } = resolveBootstrapContextSync({\n      profileDir,\n      config: cfg,\n      sessionKey,\n      excludeHeartbeat: excludeHeartbeat ?? !heartbeatEnabled,\n      contextInjection,\n    });\n    return contextFiles;\n  }\n\n  private skillCatalogEntryFromSkill(s: Skill, skillsConfig = createSkillConfigManager(resolveStateDir()).load(), lock = loadSkillsLock()): SkillCatalogEntry {\n    const base = resolve(s.baseDir);\n    const managed = isUnderManagedSkillsDir(s.baseDir);\n    const directoryId = base.split(sep).filter(Boolean).pop() || s.name;\n    const enabled = !(skillsConfig.entries?.[s.name]?.enabled === false);\n    const hubKey = managed ? basename(base) : '';\n    const hub = managed && hubKey ? lock.entries[hubKey] : undefined;\n\n    return {\n      directoryId,\n      name: s.name,\n      description: s.description,\n      category: s.category,\n      source: s.source,\n      path: s.baseDir,\n      managed,\n      enabled,\n      disableModelInvocation: s.disableModelInvocation,\n      ...(hub ? { hub } : {}),\n    };\n  }\n\n  getSkillCatalog(): SkillCatalogEntry[] {\n    return this.getSkillCatalogSnapshot().catalog;\n  }\n\n  getSkillCatalogSnapshot(): SkillCatalogSnapshot {\n    const skillsConfig = createSkillConfigManager(resolveStateDir()).load();\n    const lock = loadSkillsLock();\n    const rt = this.workspaceRuntimes.getOrCreate(this.baseWorkspacePath);\n    return {\n      catalog: rt.skillManager\n        .getSkills()\n        .map((s) => this.skillCatalogEntryFromSkill(s, skillsConfig, lock)),\n      version: rt.skillManager.getVersion(),\n      loadedAt: rt.skillManager.getLoadedAt(),\n      diagnostics: rt.skillManager.getDiagnostics(),\n      status: rt.skillManager.getStatus(),\n    };\n  }\n\n  getAgentSkillAvailability(agentId: string): AgentSkillAvailabilityPayload {\n    const cfg = this.config.config!;\n    const defaultsAllowlist = cfg.agents?.defaults?.skills;\n    const entry = Array.isArray(cfg.agents?.list)\n      ? cfg.agents.list.find((a) => a && a.enabled !== false && a.id.toLowerCase() === agentId.toLowerCase())\n      : undefined;\n    const profile = resolveEffectiveAgentProfile(cfg, agentId);\n    const rt = this.workspaceRuntimes.getOrCreate(profile.resolvedWorkspacePath);\n    const skillsConfig = createSkillConfigManager(resolveStateDir()).load();\n    const lock = loadSkillsLock();\n    const allow = profile.skillsAllowlist === undefined ? undefined : new Set(profile.skillsAllowlist.map((s) => s.toLowerCase()));\n\n    const skills = rt.skillManager.getSkills().map((s) => {\n      let unavailableReason: AgentSkillUnavailableReason | null = null;\n      const skillConfig = resolveSkillConfig(s, skillsConfig);\n      if (skillConfig.enabled === false) {\n        unavailableReason = 'disabled';\n      } else if (s.disableModelInvocation) {\n        unavailableReason = 'model-invocation-disabled';\n      } else if (!isSkillEnabled(s, skillsConfig)) {\n        unavailableReason = 'requirements-unmet';\n      } else if (allow !== undefined && !allow.has(s.name.toLowerCase())) {\n        unavailableReason = 'agent-denied';\n      }\n\n      return {\n        ...this.skillCatalogEntryFromSkill(s, skillsConfig, lock),\n        availableForCurrentAgent: unavailableReason === null,\n        unavailableReason,\n      };\n    });\n\n    return {\n      agentId: profile.agentId,\n      version: rt.skillManager.getVersion(),\n      loadedAt: rt.skillManager.getLoadedAt(),\n      diagnostics: rt.skillManager.getDiagnostics(),\n      status: rt.skillManager.getStatus(),\n      ...(defaultsAllowlist !== undefined ? { defaultsAllowlist: [...defaultsAllowlist] } : {}),\n      ...(entry?.skills !== undefined ? { agentAllowlist: [...entry.skills] } : {}),\n      ...(profile.skillsAllowlist !== undefined ? { effectiveAllowlist: [...profile.skillsAllowlist] } : {}),\n      skills,\n    };\n  }\n\n  /**\n   * After ~/.xopc/skills.json changes (enable/disable), refresh `<available_skills>` on active agents.\n   */\n  refreshSkillsAfterSkillConfigChange(): void {\n    const cfg = this.config.config!;\n    const touched = new Set<string>();\n    for (const [resolvedPath, rt] of this.workspaceRuntimes.entries()) {\n      rt.skillManager.refreshPromptFromConfig();\n      touched.add(resolvedPath);\n    }\n    for (const instance of this.agents.values()) {\n      const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);\n      if (!touched.has(instance.resolvedWorkspacePath)) {\n        rt.skillManager.refreshPromptFromConfig();\n        touched.add(instance.resolvedWorkspacePath);\n      }\n      const contextFiles = this.resolveContextFilesForSession(\n        instance.sessionKey,\n        instance.effectiveProfile,\n      );\n      const newPrompt = rt.systemPromptBuilder.build(contextFiles, {\n        externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n        workspaceOverride: instance.resolvedWorkspacePath,\n        profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n        systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n        skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n        registeredToolNames: instance.registeredToolNames,\n        sessionKey: instance.sessionKey,\n        modelRef: instance.effectiveProfile.primaryModelRef?.trim() || this.defaultModel,\n        agentId: instance.effectiveProfile.agentId,\n        thinkingLevel:\n          (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n          this.config.thinkingLevel ??\n          'medium',\n      });\n      instance.agent.state.systemPrompt = newPrompt;\n    }\n    log.info({ agents: this.agents.size }, 'Skill toggles applied; system prompt updated');\n    this.scheduleSkillsUpdated('config');\n  }\n\n  /**\n   * Reload skills from disk and refresh system prompt on all active Agent instances.\n   */\n  refreshSkillsAfterDiskChange(source: 'explicit' | 'watch' = 'explicit'): void {\n    const now = Date.now();\n    if (source === 'watch' && now - this.lastExplicitSkillDiskRefreshAt < 2500) {\n      log.debug({ changedWithinMs: now - this.lastExplicitSkillDiskRefreshAt }, 'Ignoring skill watcher echo after explicit refresh');\n      return;\n    }\n    if (source === 'explicit') {\n      this.lastExplicitSkillDiskRefreshAt = now;\n    }\n\n    if (this.skillDiskRefreshInProgress) {\n      this.skillDiskRefreshPending = true;\n      return;\n    }\n\n    this.skillDiskRefreshInProgress = true;\n    let refreshed = false;\n    try {\n      do {\n        this.skillDiskRefreshPending = false;\n        this.applySkillsAfterDiskChange();\n        refreshed = true;\n      } while (this.skillDiskRefreshPending);\n    } finally {\n      this.skillDiskRefreshInProgress = false;\n    }\n\n    if (refreshed) {\n      this.scheduleSkillsUpdated('disk');\n    }\n  }\n\n  private scheduleSkillsUpdated(reason: 'disk' | 'config'): void {\n    this.pendingSkillsUpdatedReason = reason === 'disk' ? 'disk' : this.pendingSkillsUpdatedReason ?? 'config';\n    if (this.skillsUpdatedTimer) clearTimeout(this.skillsUpdatedTimer);\n    this.skillsUpdatedTimer = setTimeout(() => {\n      const nextReason = this.pendingSkillsUpdatedReason ?? reason;\n      this.pendingSkillsUpdatedReason = undefined;\n      this.skillsUpdatedTimer = undefined;\n      this.config.onSkillsUpdated?.({ reason: nextReason });\n    }, 250);\n  }\n\n  private applySkillsAfterDiskChange(): void {\n    const cfg = this.config.config!;\n    // Reload every workspace SkillManager first. When there are no active agent sessions\n    // (e.g. gateway UI only), the loop below runs zero times — without this, `getSkillCatalog()`\n    // and delete flows still see stale in-memory skills after ~/.xopc/skills changes.\n    for (const rt of this.workspaceRuntimes.values()) {\n      rt.skillManager.reload();\n    }\n\n    const touched = new Set<string>();\n    for (const instance of this.agents.values()) {\n      const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);\n      if (!touched.has(instance.resolvedWorkspacePath)) {\n        touched.add(instance.resolvedWorkspacePath);\n      }\n      const contextFiles = this.resolveContextFilesForSession(\n        instance.sessionKey,\n        instance.effectiveProfile,\n      );\n      const newPrompt = rt.systemPromptBuilder.rebuild(contextFiles, {\n        externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n        workspaceOverride: instance.resolvedWorkspacePath,\n        profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n        systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n        skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n        registeredToolNames: instance.registeredToolNames,\n        sessionKey: instance.sessionKey,\n        modelRef: instance.effectiveProfile.primaryModelRef?.trim() || this.defaultModel,\n        agentId: instance.effectiveProfile.agentId,\n        thinkingLevel:\n          (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n          this.config.thinkingLevel ??\n          'medium',\n      });\n      instance.agent.state.systemPrompt = newPrompt;\n    }\n    log.info({ agents: this.agents.size }, 'Skills refreshed; system prompt updated');\n  }\n\n  /**\n   * Get or create an Agent instance for a session\n   */\n  getOrCreateAgent(sessionKey: string): Agent {\n    const cfg = this.config.config!;\n    const targetPath = this.getResolvedWorkspaceForSession(sessionKey);\n    const existing = this.agents.get(sessionKey);\n    if (existing) {\n      if (existing.resolvedWorkspacePath !== targetPath) {\n        this.removeAgent(sessionKey);\n      } else {\n        existing.lastUsedAt = Date.now();\n        log.debug({ sessionKey }, 'Reusing existing agent instance');\n        return existing.agent;\n      }\n    }\n\n    const profile = resolveEffectiveAgentProfileForSession(cfg, sessionKey);\n    const resolvedPath = targetPath;\n    const rt = this.workspaceRuntimes.getOrCreate(resolvedPath);\n\n    if (isMemorySubsystemEnabled(cfg)) {\n      void rt.memoryManager\n        .initializeAll(sessionKey, { workspace: resolvedPath })\n        .catch((err) => log.warn({ err, sessionKey }, 'memory initializeAll failed'));\n    }\n\n    if (isMemorySubsystemEnabled(cfg) && shouldRegisterCuratedMemoryTool(cfg)) {\n      rt.builtinMemoryStore.loadFromDiskSync();\n    }\n\n    const { agent, registeredToolNames } = this.createAgentForProfile(\n      sessionKey,\n      profile,\n      resolvedPath,\n      rt,\n    );\n\n    this.agents.set(sessionKey, {\n      agent,\n      sessionKey,\n      createdAt: Date.now(),\n      lastUsedAt: Date.now(),\n      effectiveProfile: profile,\n      resolvedWorkspacePath: resolvedPath,\n      registeredToolNames,\n      skillEnvPassthroughKeys: new Set<string>(),\n    });\n\n    this.backgroundReview.attachToAgent(sessionKey, agent, registeredToolNames);\n\n    const modelRef = profile.primaryModelRef?.trim() || this.defaultModel;\n    this.config.getModelManager?.().setSessionProfileDefault(sessionKey, modelRef);\n\n    log.debug({ sessionKey, totalAgents: this.agents.size, agentId: profile.agentId }, 'Created new agent instance');\n    return agent;\n  }\n\n  /**\n   * Get existing agent for a session (if any)\n   */\n  getAgent(sessionKey: string): Agent | undefined {\n    return this.agents.get(sessionKey)?.agent;\n  }\n\n  /**\n   * Check if an agent exists for a session\n   */\n  hasAgent(sessionKey: string): boolean {\n    return this.agents.has(sessionKey);\n  }\n\n  /**\n   * Remove an agent instance\n   */\n  removeAgent(sessionKey: string): boolean {\n    const instance = this.agents.get(sessionKey);\n    if (instance) {\n      this.backgroundReview.forgetSession(sessionKey);\n      void this.toolsFactory.closeBrowserPageForSession(sessionKey);\n      void retireSessionMcpRuntimeForSessionKey({ sessionKey, reason: 'agent-evict' });\n      instance.agent.abort();\n      evictEmbeddedSessionRunner(sessionKey, 'agent_removed');\n      this.agents.delete(sessionKey);\n      this.memoryPrefetch.forgetSession(sessionKey);\n      clearBootstrapSnapshot(sessionKey);\n      this.config.getModelManager?.().clearSessionProfileDefault(sessionKey);\n      log.info({ sessionKey, totalAgents: this.agents.size }, 'Removed agent instance');\n      return true;\n    }\n    return false;\n  }\n\n  /**\n   * Get all active session keys\n   */\n  getActiveSessions(): string[] {\n    return Array.from(this.agents.keys());\n  }\n\n  /**\n   * Get agent count\n   */\n  getAgentCount(): number {\n    return this.agents.size;\n  }\n\n  /**\n   * Merge per-turn channel system prompt (e.g. Telegram group/topic override) into the agent.\n   */\n  applyTurnChannelSystemPrompt(sessionKey: string, channelSystemPrompt: string): void {\n    const trimmed = channelSystemPrompt.trim();\n    if (!trimmed) return;\n\n    const instance = this.agents.get(sessionKey);\n    if (!instance) return;\n\n    const cfg = this.config.config!;\n    const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);\n    const contextFiles = this.resolveContextFilesForSession(sessionKey, instance.effectiveProfile);\n    const modelRef = instance.effectiveProfile.primaryModelRef?.trim() || this.defaultModel;\n    const thinkingLevel =\n      (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n      this.config.thinkingLevel ??\n      'medium';\n\n    instance.agent.state.systemPrompt = rt.systemPromptBuilder.build(contextFiles, {\n      externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n      workspaceOverride: instance.resolvedWorkspacePath,\n      profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n      systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n      skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n      registeredToolNames: instance.registeredToolNames,\n      sessionKey,\n      modelRef,\n      agentId: instance.effectiveProfile.agentId,\n      thinkingLevel,\n      extraSystemPrompt: trimmed,\n    });\n  }\n\n  /**\n   * Set thinking level for a session's agent\n   */\n  setThinkingLevel(sessionKey: string, level: ThinkingLevel): void {\n    const instance = this.agents.get(sessionKey);\n    if (instance) {\n      instance.agent.state.thinkingLevel = level;\n      log.debug({ sessionKey, thinkingLevel: level }, 'Set thinking level for agent');\n    }\n  }\n\n  /**\n   * Dispose all agents\n   */\n  dispose(): void {\n    if (this.skillsUpdatedTimer) clearTimeout(this.skillsUpdatedTimer);\n    this.skillFilesystemWatcher.dispose();\n    void this.toolsFactory.shutdownBrowser();\n    void disposeAllSessionMcpRuntimes().catch(() => {});\n    evictAllEmbeddedSessionRunners('agent_manager_dispose');\n    this.backgroundReview.clear();\n    for (const instance of this.agents.values()) {\n      instance.agent.abort();\n    }\n    this.agents.clear();\n    this.memoryPrefetch.clear();\n    this.sessionWorkspaceOverrides.clear();\n    void this.workspaceRuntimes.clearAll();\n    log.debug('All agent instances disposed');\n  }\n\n  async warmCredentialCache(): Promise<void> {\n    const profiles = await this.credentialResolver.listProfiles();\n    for (const profile of profiles) {\n      const secret = profile.key?.trim()\n        ? profile.key.trim()\n        : profile.envVar\n          ? process.env[profile.envVar]?.trim()\n          : undefined;\n      if (secret) {\n        this.credentialCache.set(profile.provider.toLowerCase(), secret);\n      }\n    }\n    log.debug({ count: this.credentialCache.size }, 'Credential cache warmed');\n  }\n\n  async refreshCredentials(): Promise<void> {\n    this.credentialCache.clear();\n    await this.warmCredentialCache();\n  }\n\n  private resolveApiKeyWithCache(provider: string): string | undefined {\n    const key = provider.toLowerCase();\n    const cached = this.credentialCache.get(key);\n    if (cached) return cached;\n\n    const fromDisk = resolveProviderApiKeySync(provider);\n    if (fromDisk) {\n      this.credentialCache.set(key, fromDisk);\n      return fromDisk;\n    }\n\n    const fromRegistryOrEnv = getApiKeySync(provider);\n    if (fromRegistryOrEnv) {\n      this.credentialCache.set(key, fromRegistryOrEnv);\n      return fromRegistryOrEnv;\n    }\n    return undefined;\n  }\n\n  private createAgentForProfile(\n    sessionKey: string,\n    profile: EffectiveAgentProfile,\n    resolvedWorkspacePath: string,\n    rt: WorkspaceRuntime,\n  ): { agent: Agent; registeredToolNames: string[] } {\n    const modelRef = profile.primaryModelRef?.trim() || this.defaultModel;\n    const model = this.resolveModelStringToModel(modelRef);\n\n    const contextFiles = this.resolveContextFilesForSession(sessionKey, profile);\n    const tools = this.toolsFactory.createAllTools({\n      workspace: resolvedWorkspacePath,\n      profileMarkdownRoot: resolveAgentProfileDir(this.config.config!, profile.agentId),\n      disabledTools: profile.tools.disable,\n      getPrimaryModel: () => this.resolveModelStringToModel(modelRef),\n      getBuiltinMemoryStore: () => rt.builtinMemoryStore,\n      getMemoryManager: () => rt.memoryManager,\n      getSkillManager: () => rt.skillManager,\n    });\n    const registeredToolNames = tools.map((t) => t.name);\n\n    const thinkingLevel =\n      (profile.thinkingDefault as ThinkingLevel | undefined) ?? this.config.thinkingLevel ?? 'medium';\n\n    const agent = new Agent({\n      initialState: {\n        systemPrompt: rt.systemPromptBuilder.build(contextFiles, {\n          externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n          workspaceOverride: resolvedWorkspacePath,\n          profileMarkdownPathRoot: resolveAgentProfileDir(this.config.config!, profile.agentId),\n          systemPromptOverride: profile.systemPromptOverride,\n          skillAllowlist: profile.skillsAllowlist,\n          registeredToolNames,\n          sessionKey,\n          modelRef,\n          agentId: profile.agentId,\n          thinkingLevel,\n        }),\n        model,\n        thinkingLevel,\n        tools,\n        messages: [],\n      },\n      streamFn: createExtensionAwareStreamFn(),\n      getApiKey: (provider: string) => this.resolveApiKeyWithCache(provider),\n      beforeToolCall: async ({ toolCall, args }) => {\n        const toolName = toolCall.name;\n\n        if (toolName === 'shell') {\n          const ctx = this.config.getCurrentContext();\n          const cfg = this.mergedConfig();\n          if (ctx && cfg) {\n            const command =\n              typeof (args as { command?: unknown })?.command === 'string'\n                ? (args as { command: string }).command\n                : JSON.stringify(args ?? {});\n            const accountId =\n              typeof ctx.metadata?.accountId === 'string' ? ctx.metadata.accountId : undefined;\n            const approval = await maybeRequestChannelExecApproval({\n              cfg,\n              payload: {\n                sessionKey: ctx.sessionKey,\n                channel: ctx.channel,\n                chatId: ctx.chatId,\n                accountId,\n                toolName,\n                summary: command.slice(0, 500),\n                details: { command: command.slice(0, 2000) },\n              },\n            });\n            if (approval.required && !approval.approved) {\n              return {\n                block: true,\n                reason: approval.reason ?? 'Exec approval denied or timed out.',\n              };\n            }\n          }\n        }\n\n        if (!this.config.hookRunner) {\n          return undefined;\n        }\n        const parsed = parseMcpToolName(toolName);\n        const hookResult = await this.config.hookRunner.runBeforeToolCall(\n          toolName,\n          (args ?? {}) as Record<string, unknown>,\n          {\n            sessionKey,\n            isMcpTool: parsed !== null,\n            mcpServerId: parsed?.serverId,\n          },\n        );\n        if (!hookResult.allowed) {\n          return { block: true, reason: hookResult.reason ?? 'Tool call blocked by policy hook.' };\n        }\n        return undefined;\n      },\n    });\n    return { agent, registeredToolNames };\n  }\n\n  /**\n   * Set model for a specific session\n   */\n  setModelForSession(sessionKey: string, modelId: string): boolean {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      log.warn(\n        { sessionKey, modelId, activeSessionCount: this.agents.size },\n        `setModelForSession: no agent instance for session (create session / run turn first); modelId=${modelId}`,\n      );\n      return false;\n    }\n\n    try {\n      const model = resolveModel(modelId);\n      instance.agent.state.model = model;\n\n      const cfg = this.config.config!;\n      const rt = this.workspaceRuntimes.getOrCreate(instance.resolvedWorkspacePath);\n      const contextFiles = this.resolveContextFilesForSession(\n        sessionKey,\n        instance.effectiveProfile,\n      );\n      const thinkingLevel =\n        (instance.agent.state.thinkingLevel as ThinkingLevel | undefined) ??\n        (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n        this.config.thinkingLevel ??\n        'medium';\n\n      instance.agent.state.systemPrompt = rt.systemPromptBuilder.build(contextFiles, {\n        externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n        workspaceOverride: instance.resolvedWorkspacePath,\n        profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n        systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n        skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n        registeredToolNames: instance.registeredToolNames,\n        sessionKey,\n        modelRef: modelId,\n        agentId: instance.effectiveProfile.agentId,\n        thinkingLevel,\n      });\n\n      log.info({ sessionKey, modelId }, 'Model set for session');\n      return true;\n    } catch (err) {\n      log.error({ err, sessionKey, modelId }, 'Failed to set model for session');\n      return false;\n    }\n  }\n\n  /**\n   * Get last assistant content from a session's agent\n   */\n  getLastAssistantContent(sessionKey: string): string | null {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      return null;\n    }\n\n    const messages = instance.agent.state.messages;\n    for (let i = messages.length - 1; i >= 0; i--) {\n      const msg = messages[i];\n      if (msg.role === 'assistant') {\n        const content = msg.content;\n        if (Array.isArray(content)) {\n          return extractTextContent(content as Array<{ type: string; text?: string }>);\n        }\n        return String(content);\n      }\n    }\n    return null;\n  }\n\n  /**\n   * Replace messages for a session's agent\n   */\n  replaceMessages(sessionKey: string, messages: AgentMessage[]): boolean {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      return 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+{"version":3,"file":"agent-manager.js","names":[],"sources":["../../../src/agent/agent-manager.ts"],"sourcesContent":["/**\n * Agent Manager - Manages Agent instances per session\n *\n * Each session gets its own Agent instance for true isolation\n * and concurrent processing across sessions.\n */\n\nimport {\n  Agent,\n  type AgentMessage,\n  type AgentEvent,\n  type ThinkingLevel,\n} from '@earendil-works/pi-agent-core';\nimport type { Model, Api } from '@earendil-works/pi-ai';\nimport type { AgentInstanceGateway } from './agent-instance-gateway.js';\nimport { type Config, getAgentDefaultModelRef } from '../config/schema.js';\nimport { applyConfigOverrides } from '../config/runtime-overrides.js';\nimport { resolveAgentProfileDir } from './agent-scope.js';\nimport {\n  type EffectiveAgentProfile,\n  resolveEffectiveAgentProfile,\n  resolveEffectiveAgentProfileForSession,\n} from '../config/agent-profile.js';\nimport { expandWorkspacePathString } from '../config/workspace-path.js';\nimport type { ModelManager } from './models/manager.js';\nimport { createLogger } from '../utils/logger.js';\nimport { resolveProviderApiKeySync } from '../auth/sync-provider-auth.js';\nimport { resolveModel, getDefaultModelSync, getApiKeySync } from '../providers/index.js';\nimport { createExtensionAwareStreamFn } from '../providers/extension-stream-bridge.js';\nimport { CredentialResolver } from '../auth/credentials.js';\nimport { resolveBundledSkillsDir, resolveStateDir } from '../config/paths.js';\nimport { loadProfileMarkdownFiles, extractTextContent } from './context/workspace.js';\nimport { clearBootstrapSnapshot, resolveBootstrapContextSync } from './bootstrap/bootstrap-files.js';\nimport { loadProjectAgentsContextFile } from './bootstrap/project-agents-context.js';\nimport type { EmbeddedContextFile } from './bootstrap/types.js';\nimport { AgentToolsFactory } from './tools/factory.js';\nimport { parseMcpToolName } from './mcp/bundle-mcp-policy.js';\nimport {\n  disposeAllSessionMcpRuntimes,\n  retireSessionMcpRuntimeForSessionKey,\n} from './mcp/bundle-mcp-tools.js';\nimport { evictAllEmbeddedSessionRunners, evictEmbeddedSessionRunner } from './embedded/session-runner.js';\nimport type { GatewayClarifyRequestFn } from './tools/clarify-tool.js';\nimport type { ExtensionRegistryImpl as ExtensionRegistry } from '../extensions/index.js';\nimport type { MessageBus } from '../infra/bus/index.js';\nimport type { CronService } from '../cron/index.js';\nimport type { SessionStore } from '../session/store.js';\nimport { isValidSkillEnvVarName } from './skills/required-env-vars.js';\nimport type { SessionContext } from './session/session-context.js';\nimport type {\n  Skill,\n  SkillDiagnostic,\n  SkillMarkdownPreviewPayload,\n  SkillRuntimeStatus,\n} from './skills/types.js';\nimport { createSkillConfigManager, isSkillEnabled, resolveSkillConfig } from './skills/config.js';\nimport { isUnderManagedSkillsDir } from './skills/managed-store.js';\nimport { loadSkillsLock, type SkillHubLockEntry } from './skills/hub-lock.js';\nimport { basename, resolve, sep } from 'node:path';\n\nimport {\n  isMemorySubsystemEnabled,\n  shouldRegisterCuratedMemoryTool,\n} from './memory/memory-config.js';\nimport type { MemoryManager } from './memory/manager.js';\nimport { MemoryPrefetchCoordinator } from './memory/prefetch-coordinator.js';\nimport { WorkspaceRuntimeRegistry, type WorkspaceRuntime } from './workspace-runtime/registry.js';\nimport { BackgroundReviewCoordinator } from './background-review/coordinator.js';\nimport { maybeRequestChannelExecApproval } from '../channels/exec-approval-runtime.js';\nimport { SkillFilesystemWatcher } from './skills/filesystem-watcher.js';\nimport { ProjectTrustStore, hasTrustRequiringProjectResources } from '../project-trust/trust-store.js';\n\nconst log = createLogger('AgentManager');\n\nexport interface SkillCatalogEntry {\n  directoryId: string;\n  name: string;\n  description: string;\n  category?: string;\n  source: Skill['source'];\n  path: string;\n  managed: boolean;\n  /** User toggle in ~/.xopc/skills.json (`entries[name].enabled`). Default true. */\n  enabled: boolean;\n  /** When true, skill is never injected into `<available_skills>` (SKILL.md frontmatter). */\n  disableModelInvocation: boolean;\n  /** Hub install provenance when under ~/.xopc/skills and listed in skills-lock.json. */\n  hub?: SkillHubLockEntry;\n}\n\nexport interface SkillCatalogRuntimeMeta {\n  version: string;\n  loadedAt: number;\n  diagnostics: SkillDiagnostic[];\n  status: SkillRuntimeStatus;\n}\n\nexport interface SkillCatalogSnapshot extends SkillCatalogRuntimeMeta {\n  catalog: SkillCatalogEntry[];\n}\n\nexport type AgentSkillUnavailableReason = 'agent-denied' | 'disabled' | 'requirements-unmet' | 'model-invocation-disabled';\n\nexport interface AgentSkillAvailabilityEntry extends SkillCatalogEntry {\n  availableForCurrentAgent: boolean;\n  unavailableReason: AgentSkillUnavailableReason | null;\n}\n\nexport interface AgentSkillAvailabilityPayload {\n  agentId: string;\n  version: string;\n  loadedAt: number;\n  diagnostics: SkillDiagnostic[];\n  status: SkillRuntimeStatus;\n  defaultsAllowlist?: string[];\n  agentAllowlist?: string[];\n  effectiveAllowlist?: string[];\n  skills: AgentSkillAvailabilityEntry[];\n}\n\nexport interface AgentManagerConfig {\n  workspace: string;\n  model?: string;\n  config?: Config;\n  extensionRegistry?: ExtensionRegistry;\n  hookRunner?: import('../extensions/index.js').ExtensionHookRunner;\n  bus: MessageBus;\n  getCurrentContext: () => SessionContext | null;\n  /** Session persistence (enables `session_search` when set). */\n  getSessionStore?: () => SessionStore;\n  /** Clears per-session profile default on teardown. */\n  getModelManager?: () => ModelManager;\n  // Thinking configuration\n  thinkingLevel?: ThinkingLevel;\n  reasoningLevel?: 'off' | 'on' | 'stream';\n  verboseLevel?: 'off' | 'on' | 'full';\n  gatewayClarify?: { requestClarification: GatewayClarifyRequestFn };\n  /** Gateway: exposes CronService for the `cronjob` tool. */\n  getCronService?: () => CronService | undefined;\n  /** Gateway: starts persisted workflow runs (dedicated chat session per run). */\n  getWorkflowRunService?: () => import('../workflows/service/workflow-run-service.types.js').WorkflowRunServiceLike | undefined;\n  /** Runtime notification for UI/CLI shells that cache skill catalogs. */\n  onSkillsUpdated?: (payload: { reason: 'disk' | 'config' }) => void;\n  /**\n   * Runtime trust override. Persistent \"do not trust\" entries still take precedence.\n   */\n  isWorkspaceTrusted?: (workspaceDir: string) => boolean | null | undefined;\n}\n\nexport interface AgentInstance {\n  agent: Agent;\n  sessionKey: string;\n  createdAt: number;\n  lastUsedAt: number;\n  effectiveProfile: EffectiveAgentProfile;\n  resolvedWorkspacePath: string;\n  /** Tool names registered on this agent (for skill indexing / tool gating). */\n  registeredToolNames: string[];\n  /** Declared env var names from skill_view; shell reads values from process.env at spawn time. */\n  skillEnvPassthroughKeys: Set<string>;\n}\n\n\nexport class AgentManager implements AgentInstanceGateway {\n  private agents = new Map<string, AgentInstance>();\n  private config: AgentManagerConfig;\n  private toolsFactory: AgentToolsFactory;\n\n  private mergedConfig(): Config | undefined {\n    const base = this.config.config;\n    return base ? applyConfigOverrides(base) : undefined;\n  }\n  /** Default agent workspace (effective profile for `getDefaultAgentId`). */\n  private baseWorkspacePath: string;\n  /** Per-session absolute markdown workspace when `SessionAgentConfig.workingDirectoryOverride` is set. */\n  private sessionWorkspaceOverrides = new Map<string, string>();\n  private defaultModel: string;\n  private credentialCache = new Map<string, string>();\n  private credentialResolver: CredentialResolver;\n  private workspaceRuntimes: WorkspaceRuntimeRegistry;\n  private memoryPrefetch: MemoryPrefetchCoordinator;\n  private backgroundReview: BackgroundReviewCoordinator;\n  private skillFilesystemWatcher: SkillFilesystemWatcher;\n  private skillDiskRefreshInProgress = false;\n  private skillDiskRefreshPending = false;\n  private lastExplicitSkillDiskRefreshAt = 0;\n  private skillsUpdatedTimer: NodeJS.Timeout | undefined;\n  private pendingSkillsUpdatedReason: 'disk' | 'config' | undefined;\n  private projectTrustStore = new ProjectTrustStore();\n\n  constructor(config: AgentManagerConfig) {\n    this.config = config;\n    this.baseWorkspacePath = this.computeBaseWorkspacePath();\n    this.skillFilesystemWatcher = new SkillFilesystemWatcher({\n      onChange: (event) => {\n        log.info({ changedPath: event.changedPath }, 'Skill filesystem changed; refreshing skills');\n        this.refreshSkillsAfterDiskChange('watch');\n      },\n    });\n    this.skillFilesystemWatcher.refreshPrimaryWorkspace(this.baseWorkspacePath);\n    this.workspaceRuntimes = new WorkspaceRuntimeRegistry({\n      getConfig: () => this.config.config!,\n      bundledSkillsDir: resolveBundledSkillsDir(),\n      onRuntimeCreated: (resolvedPath) => {\n        this.skillFilesystemWatcher.watchWorkspace(resolvedPath);\n      },\n    });\n    this.memoryPrefetch = new MemoryPrefetchCoordinator({\n      getConfig: () => this.config.config,\n      getMemoryManagerForSession: (sk) => this.getMemoryManagerForSession(sk),\n      getLastAssistantContent: (sk) => this.getLastAssistantContent(sk),\n    });\n    this.backgroundReview = new BackgroundReviewCoordinator({\n      getConfig: () => this.mergedConfig(),\n      onSkillsFilesystemMutate: () => this.refreshSkillsAfterDiskChange('explicit'),\n    });\n    this.toolsFactory = new AgentToolsFactory(this.buildToolsFactoryDeps());\n\n    this.defaultModel = config.model || getDefaultModelSync(config.config);\n\n    this.credentialResolver = new CredentialResolver();\n    this.warmCredentialCache().catch((err) => {\n      const em = err instanceof Error ? err.message : String(err);\n      log.warn({ err, errorMessage: em }, `Credential cache pre-warm failed: ${em}`);\n    });\n  }\n\n  private computeBaseWorkspacePath(): string {\n    const cfg = this.config.config;\n    if (!cfg) {\n      return expandWorkspacePathString(this.config.workspace);\n    }\n    return resolveEffectiveAgentProfileForSession(cfg, null).resolvedWorkspacePath;\n  }\n\n  /**\n   * Workspace root for inbound attachments / side effects for this session's agent id.\n   * Uses in-memory session workspace overrides when the session has a persisted `workingDirectoryOverride`.\n   */\n  getResolvedWorkspaceForSession(sessionKey: string): string {\n    const cfg = this.config.config!;\n    const fromMap = this.sessionWorkspaceOverrides.get(sessionKey);\n    if (fromMap !== undefined) {\n      return fromMap;\n    }\n    return resolveEffectiveAgentProfileForSession(cfg, sessionKey).resolvedWorkspacePath;\n  }\n\n  private getWorkspaceRuntimeForSession(sessionKey: string | undefined): WorkspaceRuntime {\n    const resolvedPath = sessionKey\n      ? this.getResolvedWorkspaceForSession(sessionKey)\n      : this.baseWorkspacePath;\n    return this.workspaceRuntimes.getOrCreate(resolvedPath);\n  }\n\n  private getCurrentWorkspaceRuntime(): WorkspaceRuntime {\n    return this.getWorkspaceRuntimeForSession(this.config.getCurrentContext?.()?.sessionKey);\n  }\n\n  /**\n   * Sync in-memory workspace override from session config (after load or PATCH).\n   * Pass `null` to clear when the session has no `workingDirectoryOverride` on disk.\n   */\n  setSessionWorkspaceOverride(sessionKey: string, absolutePath: string | null): void {\n    if (absolutePath === null || absolutePath === '') {\n      this.sessionWorkspaceOverrides.delete(sessionKey);\n    } else {\n      this.sessionWorkspaceOverrides.set(sessionKey, absolutePath);\n    }\n  }\n\n  /** Merged `thinkingDefault` for this session's agent id (defaults + `agents.list`). */\n  getThinkingDefaultForSession(\n    sessionKey: string,\n  ): import('./transcript/thinking-types.js').ThinkLevel | undefined {\n    const cfg = this.mergedConfig();\n    if (!cfg) {\n      return undefined;\n    }\n    return resolveEffectiveAgentProfileForSession(cfg, sessionKey).thinkingDefault;\n  }\n\n  private pickDefaultModelRef(): string {\n    const cfg = this.mergedConfig();\n    const ref = getAgentDefaultModelRef(cfg);\n    return ref?.trim() || getDefaultModelSync(cfg);\n  }\n\n  private resolveModelStringToModel(modelRef: string): Model<Api> {\n    try {\n      return resolveModel(modelRef);\n    } catch {\n      const fallback = getDefaultModelSync(this.mergedConfig());\n      log.warn({ modelRef, fallback }, 'Model not found, using default');\n      return resolveModel(fallback);\n    }\n  }\n\n  /**\n   * Keep defaults in sync when config is hot-reloaded or saved from the UI.\n   *\n   * The previous implementation rebuilt the entire `AgentToolsFactory` (80+ lines\n   * of dependency wiring) on every reload. The factory's deps are now built from\n   * a single helper ({@link buildToolsFactoryDeps}) and read `this.*` through\n   * closures, so existing instances automatically see the new config without\n   * reconstruction. The browser is still shut down because its cached settings\n   * (headless mode, backend choice) come from the config snapshot at connect time.\n   */\n  updateAgentDefaults(config: Config): void {\n    this.config.config = config;\n    const ref = getAgentDefaultModelRef(config);\n    this.config.model = ref;\n    this.defaultModel = ref || getDefaultModelSync(config);\n    this.baseWorkspacePath = this.computeBaseWorkspacePath();\n    this.skillFilesystemWatcher.refreshPrimaryWorkspace(this.baseWorkspacePath);\n    void this.toolsFactory.shutdownBrowser();\n    void this.workspaceRuntimes.clearAll();\n  }\n\n  /**\n   * Construct the dep bag passed to `AgentToolsFactory`. Closures reference\n   * `this.*` so they remain valid across hot reloads (no rebuild needed).\n   */\n  private buildToolsFactoryDeps(): ConstructorParameters<typeof AgentToolsFactory>[0] {\n    return {\n      workspace: this.baseWorkspacePath,\n      extensionRegistry: this.config.extensionRegistry,\n      getCurrentContext: this.config.getCurrentContext,\n      hookRunner: this.config.hookRunner,\n      bus: this.config.bus,\n      getConfig: () => this.mergedConfig(),\n      getPrimaryModel: () => this.resolveModelStringToModel(this.pickDefaultModelRef()),\n      getBuiltinMemoryStore: () => this.getCurrentWorkspaceRuntime().builtinMemoryStore,\n      getMemoryManager: () => this.getCurrentWorkspaceRuntime().memoryManager,\n      getSessionStore: this.config.getSessionStore,\n      gatewayClarify: this.config.gatewayClarify,\n      getCronService: this.config.getCronService,\n      getWorkflowRunService: this.config.getWorkflowRunService,\n      getSkillIndexingContext: () => {\n        const ctx = this.config.getCurrentContext?.();\n        if (!ctx?.sessionKey) return undefined;\n        const inst = this.agents.get(ctx.sessionKey);\n        if (!inst) return undefined;\n        return {\n          registeredToolNames: inst.registeredToolNames,\n          skillAllowlist: inst.effectiveProfile.skillsAllowlist,\n        };\n      },\n      onSkillsFilesystemMutate: () => {\n        this.refreshSkillsAfterDiskChange('explicit');\n      },\n      getSkillPassthroughEnvVarNames: () => {\n        const ctx = this.config.getCurrentContext?.();\n        if (!ctx?.sessionKey) return [];\n        return [...(this.agents.get(ctx.sessionKey)?.skillEnvPassthroughKeys ?? [])];\n      },\n      registerSkillEnvPassthrough: (names: string[]) => {\n        const ctx = this.config.getCurrentContext?.();\n        if (!ctx?.sessionKey) return;\n        const inst = this.agents.get(ctx.sessionKey);\n        if (!inst) return;\n        for (const n of names) {\n          if (isValidSkillEnvVarName(n)) {\n            inst.skillEnvPassthroughKeys.add(n.trim());\n          }\n        }\n      },\n    };\n  }\n\n  getMemoryManager(): MemoryManager {\n    return this.getCurrentWorkspaceRuntime().memoryManager;\n  }\n\n  private getMemoryManagerForSession(sessionKey: string): MemoryManager {\n    return this.getWorkspaceRuntimeForSession(sessionKey).memoryManager;\n  }\n\n  /**\n   * Prefix the user turn with fenced prefetched memory (external providers).\n   * Delegates to {@link MemoryPrefetchCoordinator}.\n   */\n  applyMemoryPrefetchToUserMessage(\n    userMessage: AgentMessage,\n    sessionKey: string,\n  ): Promise<AgentMessage> {\n    return this.memoryPrefetch.applyToUserMessage(userMessage, sessionKey);\n  }\n\n  /**\n   * After a completed turn: sync external providers and queue next-turn prefetch.\n   * Delegates to {@link MemoryPrefetchCoordinator}.\n   */\n  afterAgentTurn(sessionKey: string, userPlainText: string): void {\n    this.memoryPrefetch.afterTurn(sessionKey, userPlainText);\n  }\n\n  /**\n   * Call once per user turn before the main `agent.prompt` (via {@link runAgentTurnWithModelFallbacks} `beforeUserPrompt`).\n   * Delegates to {@link BackgroundReviewCoordinator}.\n   */\n  beginBackgroundReviewUserTurn(sessionKey: string): void {\n    const inst = this.agents.get(sessionKey);\n    if (!inst) return;\n    this.backgroundReview.beginUserTurn(sessionKey, inst.registeredToolNames);\n  }\n\n  /**\n   * After a successful main turn (after memory sync via `afterAgentTurn`), may run a quiet follow-up for memory/skills.\n   * Delegates to {@link BackgroundReviewCoordinator}.\n   */\n  scheduleBackgroundReviewAfterUserTurn(sessionKey: string): void {\n    const inst = this.agents.get(sessionKey);\n    if (!inst) return;\n    this.backgroundReview.scheduleAfterUserTurn({\n      sessionKey,\n      agent: inst.agent,\n      registeredToolNames: inst.registeredToolNames,\n      skillAllowlist: inst.effectiveProfile.skillsAllowlist,\n      workspacePath: this.getResolvedWorkspaceForSession(sessionKey),\n      lastAssistantText: this.getLastAssistantContent(sessionKey),\n      workspaceRuntime: this.getWorkspaceRuntimeForSession(sessionKey),\n    });\n  }\n\n  /**\n   * Expand `/skill:name` user text into the full skill block for the current turn (WebChat, channels).\n   */\n  expandSkillUserText(text: string): string {\n    const ctx = this.config.getCurrentContext?.();\n    const sessionKey = ctx?.sessionKey;\n    const inst = sessionKey ? this.agents.get(sessionKey) : undefined;\n    return this.getWorkspaceRuntimeForSession(sessionKey).skillManager.expandCommand(text, {\n      skillAllowlist: inst?.effectiveProfile.skillsAllowlist,\n      registeredToolNames: inst?.registeredToolNames,\n    });\n  }\n\n  /** Structured SKILL.md preview for the gateway console. */\n  getSkillMarkdownSource(skillName: string): SkillMarkdownPreviewPayload | null {\n    const skill = this.getCurrentWorkspaceRuntime().skillManager.findSkill(skillName);\n    if (!skill) return null;\n\n    return {\n      name: skill.name,\n      description: skill.description,\n      bodyMarkdown: skill.content,\n      disableModelInvocation: skill.disableModelInvocation,\n      metadata: skill.metadata,\n      toolConditions: skill.toolConditions,\n      requiredEnvVarNames: skill.requiredEnvVarNames,\n    };\n  }\n\n  private loadProfileMarkdownForProfile(profile: EffectiveAgentProfile): ReturnType<typeof loadProfileMarkdownFiles> {\n    const cfg = this.config.config!;\n    const profileDir = resolveAgentProfileDir(cfg, profile.agentId);\n    return loadProfileMarkdownFiles(profileDir);\n  }\n\n  private isProjectWorkspaceTrusted(workspaceDir: string): boolean {\n    if (!hasTrustRequiringProjectResources(workspaceDir)) {\n      return false;\n    }\n\n    const persisted = this.projectTrustStore.get(workspaceDir);\n    if (persisted === false) {\n      return false;\n    }\n    if (persisted === true) {\n      return true;\n    }\n\n    try {\n      return this.config.isWorkspaceTrusted?.(workspaceDir) === true;\n    } catch (err) {\n      const errorMessage = err instanceof Error ? err.message : String(err);\n      log.warn({ err, workspaceDir, errorMessage }, `Workspace trust override failed: ${errorMessage}`);\n      return false;\n    }\n  }\n\n  private resolveContextFilesForSession(\n    sessionKey: string,\n    profile: EffectiveAgentProfile,\n    excludeHeartbeat?: boolean,\n  ): EmbeddedContextFile[] {\n    const cfg = this.config.config!;\n    const profileDir = resolveAgentProfileDir(cfg, profile.agentId);\n    const heartbeatEnabled = cfg.gateway?.heartbeat?.includeSystemPromptSection ?? false;\n    const contextInjection = cfg.agents?.defaults?.contextInjection ?? 'always';\n    const { contextFiles } = resolveBootstrapContextSync({\n      profileDir,\n      config: cfg,\n      sessionKey,\n      excludeHeartbeat: excludeHeartbeat ?? !heartbeatEnabled,\n      contextInjection,\n    });\n    const shouldAppendProjectContext =\n      contextInjection === 'always' ||\n      (contextInjection === 'continuation-skip' && contextFiles.length > 0);\n    const workspaceDir = this.getResolvedWorkspaceForSession(sessionKey);\n    if (\n      shouldAppendProjectContext &&\n      this.isProjectWorkspaceTrusted(workspaceDir)\n    ) {\n      const projectAgentsFile = loadProjectAgentsContextFile(workspaceDir);\n      if (projectAgentsFile) {\n        contextFiles.push(projectAgentsFile);\n      }\n    }\n    return contextFiles;\n  }\n\n  private skillCatalogEntryFromSkill(s: Skill, skillsConfig = createSkillConfigManager(resolveStateDir()).load(), lock = loadSkillsLock()): SkillCatalogEntry {\n    const base = resolve(s.baseDir);\n    const managed = isUnderManagedSkillsDir(s.baseDir);\n    const directoryId = base.split(sep).filter(Boolean).pop() || s.name;\n    const enabled = !(skillsConfig.entries?.[s.name]?.enabled === false);\n    const hubKey = managed ? basename(base) : '';\n    const hub = managed && hubKey ? lock.entries[hubKey] : undefined;\n\n    return {\n      directoryId,\n      name: s.name,\n      description: s.description,\n      category: s.category,\n      source: s.source,\n      path: s.baseDir,\n      managed,\n      enabled,\n      disableModelInvocation: s.disableModelInvocation,\n      ...(hub ? { hub } : {}),\n    };\n  }\n\n  getSkillCatalog(): SkillCatalogEntry[] {\n    return this.getSkillCatalogSnapshot().catalog;\n  }\n\n  getSkillCatalogSnapshot(): SkillCatalogSnapshot {\n    const skillsConfig = createSkillConfigManager(resolveStateDir()).load();\n    const lock = loadSkillsLock();\n    const rt = this.getCurrentWorkspaceRuntime();\n    return {\n      catalog: rt.skillManager\n        .getSkills()\n        .map((s) => this.skillCatalogEntryFromSkill(s, skillsConfig, lock)),\n      version: rt.skillManager.getVersion(),\n      loadedAt: rt.skillManager.getLoadedAt(),\n      diagnostics: rt.skillManager.getDiagnostics(),\n      status: rt.skillManager.getStatus(),\n    };\n  }\n\n  getAgentSkillAvailability(agentId: string): AgentSkillAvailabilityPayload {\n    const cfg = this.config.config!;\n    const defaultsAllowlist = cfg.agents?.defaults?.skills;\n    const entry = Array.isArray(cfg.agents?.list)\n      ? cfg.agents.list.find((a) => a && a.enabled !== false && a.id.toLowerCase() === agentId.toLowerCase())\n      : undefined;\n    const profile = resolveEffectiveAgentProfile(cfg, agentId);\n    const rt = this.workspaceRuntimes.getOrCreate(profile.resolvedWorkspacePath);\n    const skillsConfig = createSkillConfigManager(resolveStateDir()).load();\n    const lock = loadSkillsLock();\n    const allow = profile.skillsAllowlist === undefined ? undefined : new Set(profile.skillsAllowlist.map((s) => s.toLowerCase()));\n\n    const skills = rt.skillManager.getSkills().map((s) => {\n      let unavailableReason: AgentSkillUnavailableReason | null = null;\n      const skillConfig = resolveSkillConfig(s, skillsConfig);\n      if (skillConfig.enabled === false) {\n        unavailableReason = 'disabled';\n      } else if (s.disableModelInvocation) {\n        unavailableReason = 'model-invocation-disabled';\n      } else if (!isSkillEnabled(s, skillsConfig)) {\n        unavailableReason = 'requirements-unmet';\n      } else if (allow !== undefined && !allow.has(s.name.toLowerCase())) {\n        unavailableReason = 'agent-denied';\n      }\n\n      return {\n        ...this.skillCatalogEntryFromSkill(s, skillsConfig, lock),\n        availableForCurrentAgent: unavailableReason === null,\n        unavailableReason,\n      };\n    });\n\n    return {\n      agentId: profile.agentId,\n      version: rt.skillManager.getVersion(),\n      loadedAt: rt.skillManager.getLoadedAt(),\n      diagnostics: rt.skillManager.getDiagnostics(),\n      status: rt.skillManager.getStatus(),\n      ...(defaultsAllowlist !== undefined ? { defaultsAllowlist: [...defaultsAllowlist] } : {}),\n      ...(entry?.skills !== undefined ? { agentAllowlist: [...entry.skills] } : {}),\n      ...(profile.skillsAllowlist !== undefined ? { effectiveAllowlist: [...profile.skillsAllowlist] } : {}),\n      skills,\n    };\n  }\n\n  /**\n   * After ~/.xopc/skills.json changes (enable/disable), refresh `<available_skills>` on active agents.\n   */\n  refreshSkillsAfterSkillConfigChange(): void {\n    const cfg = this.config.config!;\n    const touched = new Set<string>();\n    for (const [resolvedPath, rt] of this.workspaceRuntimes.entries()) {\n      rt.skillManager.refreshPromptFromConfig();\n      touched.add(resolvedPath);\n    }\n    for (const instance of this.agents.values()) {\n      const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(instance.sessionKey);\n      const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);\n      if (!touched.has(resolvedWorkspacePath)) {\n        rt.skillManager.refreshPromptFromConfig();\n        touched.add(resolvedWorkspacePath);\n      }\n      const contextFiles = this.resolveContextFilesForSession(\n        instance.sessionKey,\n        instance.effectiveProfile,\n      );\n      const newPrompt = rt.systemPromptBuilder.build(contextFiles, {\n        externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n        workspaceOverride: resolvedWorkspacePath,\n        profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n        systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n        skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n        registeredToolNames: instance.registeredToolNames,\n        sessionKey: instance.sessionKey,\n        modelRef: instance.effectiveProfile.primaryModelRef?.trim() || this.defaultModel,\n        agentId: instance.effectiveProfile.agentId,\n        thinkingLevel:\n          (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n          this.config.thinkingLevel ??\n          'medium',\n      });\n      instance.agent.state.systemPrompt = newPrompt;\n    }\n    log.info({ agents: this.agents.size }, 'Skill toggles applied; system prompt updated');\n    this.scheduleSkillsUpdated('config');\n  }\n\n  /**\n   * Reload skills from disk and refresh system prompt on all active Agent instances.\n   */\n  refreshSkillsAfterDiskChange(source: 'explicit' | 'watch' = 'explicit'): void {\n    const now = Date.now();\n    if (source === 'watch' && now - this.lastExplicitSkillDiskRefreshAt < 2500) {\n      log.debug({ changedWithinMs: now - this.lastExplicitSkillDiskRefreshAt }, 'Ignoring skill watcher echo after explicit refresh');\n      return;\n    }\n    if (source === 'explicit') {\n      this.lastExplicitSkillDiskRefreshAt = now;\n    }\n\n    if (this.skillDiskRefreshInProgress) {\n      this.skillDiskRefreshPending = true;\n      return;\n    }\n\n    this.skillDiskRefreshInProgress = true;\n    let refreshed = false;\n    try {\n      do {\n        this.skillDiskRefreshPending = false;\n        this.applySkillsAfterDiskChange();\n        refreshed = true;\n      } while (this.skillDiskRefreshPending);\n    } finally {\n      this.skillDiskRefreshInProgress = false;\n    }\n\n    if (refreshed) {\n      this.scheduleSkillsUpdated('disk');\n    }\n  }\n\n  private scheduleSkillsUpdated(reason: 'disk' | 'config'): void {\n    this.pendingSkillsUpdatedReason = reason === 'disk' ? 'disk' : this.pendingSkillsUpdatedReason ?? 'config';\n    if (this.skillsUpdatedTimer) clearTimeout(this.skillsUpdatedTimer);\n    this.skillsUpdatedTimer = setTimeout(() => {\n      const nextReason = this.pendingSkillsUpdatedReason ?? reason;\n      this.pendingSkillsUpdatedReason = undefined;\n      this.skillsUpdatedTimer = undefined;\n      this.config.onSkillsUpdated?.({ reason: nextReason });\n    }, 250);\n  }\n\n  private applySkillsAfterDiskChange(): void {\n    const cfg = this.config.config!;\n    // Reload every workspace SkillManager first. When there are no active agent sessions\n    // (e.g. gateway UI only), the loop below runs zero times — without this, `getSkillCatalog()`\n    // and delete flows still see stale in-memory skills after ~/.xopc/skills changes.\n    for (const rt of this.workspaceRuntimes.values()) {\n      rt.skillManager.reload();\n    }\n\n    const touched = new Set<string>();\n    for (const instance of this.agents.values()) {\n      const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(instance.sessionKey);\n      const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);\n      if (!touched.has(resolvedWorkspacePath)) {\n        touched.add(resolvedWorkspacePath);\n      }\n      const contextFiles = this.resolveContextFilesForSession(\n        instance.sessionKey,\n        instance.effectiveProfile,\n      );\n      const newPrompt = rt.systemPromptBuilder.rebuild(contextFiles, {\n        externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n        workspaceOverride: resolvedWorkspacePath,\n        profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n        systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n        skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n        registeredToolNames: instance.registeredToolNames,\n        sessionKey: instance.sessionKey,\n        modelRef: instance.effectiveProfile.primaryModelRef?.trim() || this.defaultModel,\n        agentId: instance.effectiveProfile.agentId,\n        thinkingLevel:\n          (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n          this.config.thinkingLevel ??\n          'medium',\n      });\n      instance.agent.state.systemPrompt = newPrompt;\n    }\n    log.info({ agents: this.agents.size }, 'Skills refreshed; system prompt updated');\n  }\n\n  /**\n   * Get or create an Agent instance for a session\n   */\n  getOrCreateAgent(sessionKey: string): Agent {\n    const cfg = this.config.config!;\n    const targetPath = this.getResolvedWorkspaceForSession(sessionKey);\n    const existing = this.agents.get(sessionKey);\n    if (existing) {\n      if (existing.resolvedWorkspacePath !== targetPath) {\n        this.removeAgent(sessionKey);\n      } else {\n        existing.lastUsedAt = Date.now();\n        log.debug({ sessionKey }, 'Reusing existing agent instance');\n        return existing.agent;\n      }\n    }\n\n    const profile = resolveEffectiveAgentProfileForSession(cfg, sessionKey);\n    const resolvedPath = targetPath;\n    const rt = this.workspaceRuntimes.getOrCreate(resolvedPath);\n\n    if (isMemorySubsystemEnabled(cfg)) {\n      void rt.memoryManager\n        .initializeAll(sessionKey, { workspace: resolvedPath })\n        .catch((err) => log.warn({ err, sessionKey }, 'memory initializeAll failed'));\n    }\n\n    if (isMemorySubsystemEnabled(cfg) && shouldRegisterCuratedMemoryTool(cfg)) {\n      rt.builtinMemoryStore.loadFromDiskSync();\n    }\n\n    const { agent, registeredToolNames } = this.createAgentForProfile(\n      sessionKey,\n      profile,\n      resolvedPath,\n      rt,\n    );\n\n    this.agents.set(sessionKey, {\n      agent,\n      sessionKey,\n      createdAt: Date.now(),\n      lastUsedAt: Date.now(),\n      effectiveProfile: profile,\n      resolvedWorkspacePath: resolvedPath,\n      registeredToolNames,\n      skillEnvPassthroughKeys: new Set<string>(),\n    });\n\n    this.backgroundReview.attachToAgent(sessionKey, agent, registeredToolNames);\n\n    const modelRef = profile.primaryModelRef?.trim() || this.defaultModel;\n    this.config.getModelManager?.().setSessionProfileDefault(sessionKey, modelRef);\n\n    log.debug({ sessionKey, totalAgents: this.agents.size, agentId: profile.agentId }, 'Created new agent instance');\n    return agent;\n  }\n\n  /**\n   * Get existing agent for a session (if any)\n   */\n  getAgent(sessionKey: string): Agent | undefined {\n    return this.agents.get(sessionKey)?.agent;\n  }\n\n  /**\n   * Check if an agent exists for a session\n   */\n  hasAgent(sessionKey: string): boolean {\n    return this.agents.has(sessionKey);\n  }\n\n  /**\n   * Remove an agent instance\n   */\n  removeAgent(sessionKey: string): boolean {\n    const instance = this.agents.get(sessionKey);\n    if (instance) {\n      this.backgroundReview.forgetSession(sessionKey);\n      void this.toolsFactory.closeBrowserPageForSession(sessionKey);\n      void retireSessionMcpRuntimeForSessionKey({ sessionKey, reason: 'agent-evict' });\n      instance.agent.abort();\n      evictEmbeddedSessionRunner(sessionKey, 'agent_removed');\n      this.agents.delete(sessionKey);\n      this.memoryPrefetch.forgetSession(sessionKey);\n      clearBootstrapSnapshot(sessionKey);\n      this.config.getModelManager?.().clearSessionProfileDefault(sessionKey);\n      log.info({ sessionKey, totalAgents: this.agents.size }, 'Removed agent instance');\n      return true;\n    }\n    return false;\n  }\n\n  /**\n   * Get all active session keys\n   */\n  getActiveSessions(): string[] {\n    return Array.from(this.agents.keys());\n  }\n\n  /**\n   * Get agent count\n   */\n  getAgentCount(): number {\n    return this.agents.size;\n  }\n\n  /**\n   * Merge per-turn channel system prompt (e.g. Telegram group/topic override) into the agent.\n   */\n  applyTurnChannelSystemPrompt(sessionKey: string, channelSystemPrompt: string): void {\n    const trimmed = channelSystemPrompt.trim();\n    if (!trimmed) return;\n\n    const instance = this.agents.get(sessionKey);\n    if (!instance) return;\n\n    const cfg = this.config.config!;\n    const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(sessionKey);\n    const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);\n    const contextFiles = this.resolveContextFilesForSession(sessionKey, instance.effectiveProfile);\n    const modelRef = instance.effectiveProfile.primaryModelRef?.trim() || this.defaultModel;\n    const thinkingLevel =\n      (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n      this.config.thinkingLevel ??\n      'medium';\n\n    instance.agent.state.systemPrompt = rt.systemPromptBuilder.build(contextFiles, {\n      externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n      workspaceOverride: resolvedWorkspacePath,\n      profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n      systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n      skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n      registeredToolNames: instance.registeredToolNames,\n      sessionKey,\n      modelRef,\n      agentId: instance.effectiveProfile.agentId,\n      thinkingLevel,\n      extraSystemPrompt: trimmed,\n    });\n  }\n\n  /**\n   * Set thinking level for a session's agent\n   */\n  setThinkingLevel(sessionKey: string, level: ThinkingLevel): void {\n    const instance = this.agents.get(sessionKey);\n    if (instance) {\n      instance.agent.state.thinkingLevel = level;\n      log.debug({ sessionKey, thinkingLevel: level }, 'Set thinking level for agent');\n    }\n  }\n\n  /**\n   * Dispose all agents\n   */\n  dispose(): void {\n    if (this.skillsUpdatedTimer) clearTimeout(this.skillsUpdatedTimer);\n    this.skillFilesystemWatcher.dispose();\n    void this.toolsFactory.shutdownBrowser();\n    void disposeAllSessionMcpRuntimes().catch(() => {});\n    evictAllEmbeddedSessionRunners('agent_manager_dispose');\n    this.backgroundReview.clear();\n    for (const instance of this.agents.values()) {\n      instance.agent.abort();\n    }\n    this.agents.clear();\n    this.memoryPrefetch.clear();\n    this.sessionWorkspaceOverrides.clear();\n    void this.workspaceRuntimes.clearAll();\n    log.debug('All agent instances disposed');\n  }\n\n  async warmCredentialCache(): Promise<void> {\n    const profiles = await this.credentialResolver.listProfiles();\n    for (const profile of profiles) {\n      const secret = profile.key?.trim()\n        ? profile.key.trim()\n        : profile.envVar\n          ? process.env[profile.envVar]?.trim()\n          : undefined;\n      if (secret) {\n        this.credentialCache.set(profile.provider.toLowerCase(), secret);\n      }\n    }\n    log.debug({ count: this.credentialCache.size }, 'Credential cache warmed');\n  }\n\n  async refreshCredentials(): Promise<void> {\n    this.credentialCache.clear();\n    await this.warmCredentialCache();\n  }\n\n  private resolveApiKeyWithCache(provider: string): string | undefined {\n    const key = provider.toLowerCase();\n    const cached = this.credentialCache.get(key);\n    if (cached) return cached;\n\n    const fromDisk = resolveProviderApiKeySync(provider);\n    if (fromDisk) {\n      this.credentialCache.set(key, fromDisk);\n      return fromDisk;\n    }\n\n    const fromRegistryOrEnv = getApiKeySync(provider);\n    if (fromRegistryOrEnv) {\n      this.credentialCache.set(key, fromRegistryOrEnv);\n      return fromRegistryOrEnv;\n    }\n    return undefined;\n  }\n\n  private createAgentForProfile(\n    sessionKey: string,\n    profile: EffectiveAgentProfile,\n    resolvedWorkspacePath: string,\n    rt: WorkspaceRuntime,\n  ): { agent: Agent; registeredToolNames: string[] } {\n    const modelRef = profile.primaryModelRef?.trim() || this.defaultModel;\n    const model = this.resolveModelStringToModel(modelRef);\n\n    const contextFiles = this.resolveContextFilesForSession(sessionKey, profile);\n    const tools = this.toolsFactory.createAllTools({\n      workspace: resolvedWorkspacePath,\n      profileMarkdownRoot: resolveAgentProfileDir(this.config.config!, profile.agentId),\n      disabledTools: profile.tools.disable,\n      getPrimaryModel: () => this.resolveModelStringToModel(modelRef),\n      getBuiltinMemoryStore: () => rt.builtinMemoryStore,\n      getMemoryManager: () => rt.memoryManager,\n      getSkillManager: () => rt.skillManager,\n    });\n    const registeredToolNames = tools.map((t) => t.name);\n\n    const thinkingLevel =\n      (profile.thinkingDefault as ThinkingLevel | undefined) ?? this.config.thinkingLevel ?? 'medium';\n\n    const agent = new Agent({\n      initialState: {\n        systemPrompt: rt.systemPromptBuilder.build(contextFiles, {\n          externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n          workspaceOverride: resolvedWorkspacePath,\n          profileMarkdownPathRoot: resolveAgentProfileDir(this.config.config!, profile.agentId),\n          systemPromptOverride: profile.systemPromptOverride,\n          skillAllowlist: profile.skillsAllowlist,\n          registeredToolNames,\n          sessionKey,\n          modelRef,\n          agentId: profile.agentId,\n          thinkingLevel,\n        }),\n        model,\n        thinkingLevel,\n        tools,\n        messages: [],\n      },\n      streamFn: createExtensionAwareStreamFn(),\n      getApiKey: (provider: string) => this.resolveApiKeyWithCache(provider),\n      beforeToolCall: async ({ toolCall, args }) => {\n        const toolName = toolCall.name;\n\n        if (toolName === 'shell') {\n          const ctx = this.config.getCurrentContext();\n          const cfg = this.mergedConfig();\n          if (ctx && cfg) {\n            const command =\n              typeof (args as { command?: unknown })?.command === 'string'\n                ? (args as { command: string }).command\n                : JSON.stringify(args ?? {});\n            const accountId =\n              typeof ctx.metadata?.accountId === 'string' ? ctx.metadata.accountId : undefined;\n            const approval = await maybeRequestChannelExecApproval({\n              cfg,\n              payload: {\n                sessionKey: ctx.sessionKey,\n                channel: ctx.channel,\n                chatId: ctx.chatId,\n                accountId,\n                toolName,\n                summary: command.slice(0, 500),\n                details: { command: command.slice(0, 2000) },\n              },\n            });\n            if (approval.required && !approval.approved) {\n              return {\n                block: true,\n                reason: approval.reason ?? 'Exec approval denied or timed out.',\n              };\n            }\n          }\n        }\n\n        if (!this.config.hookRunner) {\n          return undefined;\n        }\n        const parsed = parseMcpToolName(toolName);\n        const hookResult = await this.config.hookRunner.runBeforeToolCall(\n          toolName,\n          (args ?? {}) as Record<string, unknown>,\n          {\n            sessionKey,\n            isMcpTool: parsed !== null,\n            mcpServerId: parsed?.serverId,\n          },\n        );\n        if (!hookResult.allowed) {\n          return { block: true, reason: hookResult.reason ?? 'Tool call blocked by policy hook.' };\n        }\n        return undefined;\n      },\n    });\n    return { agent, registeredToolNames };\n  }\n\n  /**\n   * Set model for a specific session\n   */\n  setModelForSession(sessionKey: string, modelId: string): boolean {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      log.warn(\n        { sessionKey, modelId, activeSessionCount: this.agents.size },\n        `setModelForSession: no agent instance for session (create session / run turn first); modelId=${modelId}`,\n      );\n      return false;\n    }\n\n    try {\n      const model = resolveModel(modelId);\n      instance.agent.state.model = model;\n\n      const cfg = this.config.config!;\n      const resolvedWorkspacePath = this.getResolvedWorkspaceForSession(sessionKey);\n      const rt = this.workspaceRuntimes.getOrCreate(resolvedWorkspacePath);\n      const contextFiles = this.resolveContextFilesForSession(\n        sessionKey,\n        instance.effectiveProfile,\n      );\n      const thinkingLevel =\n        (instance.agent.state.thinkingLevel as ThinkingLevel | undefined) ??\n        (instance.effectiveProfile.thinkingDefault as ThinkingLevel | undefined) ??\n        this.config.thinkingLevel ??\n        'medium';\n\n      instance.agent.state.systemPrompt = rt.systemPromptBuilder.build(contextFiles, {\n        externalMemoryInstructions: rt.memoryManager.buildExternalSystemPrompt(),\n        workspaceOverride: resolvedWorkspacePath,\n        profileMarkdownPathRoot: resolveAgentProfileDir(cfg, instance.effectiveProfile.agentId),\n        systemPromptOverride: instance.effectiveProfile.systemPromptOverride,\n        skillAllowlist: instance.effectiveProfile.skillsAllowlist,\n        registeredToolNames: instance.registeredToolNames,\n        sessionKey,\n        modelRef: modelId,\n        agentId: instance.effectiveProfile.agentId,\n        thinkingLevel,\n      });\n\n      log.info({ sessionKey, modelId }, 'Model set for session');\n      return true;\n    } catch (err) {\n      log.error({ err, sessionKey, modelId }, 'Failed to set model for session');\n      return false;\n    }\n  }\n\n  /**\n   * Get last assistant content from a session's agent\n   */\n  getLastAssistantContent(sessionKey: string): string | null {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      return null;\n    }\n\n    const messages = instance.agent.state.messages;\n    for (let i = messages.length - 1; i >= 0; i--) {\n      const msg = messages[i];\n      if (msg.role === 'assistant') {\n        const content = msg.content;\n        if (Array.isArray(content)) {\n          return extractTextContent(content as Array<{ type: string; text?: string }>);\n        }\n        return String(content);\n      }\n    }\n    return null;\n  }\n\n  /**\n   * Replace messages for a session's agent\n   */\n  replaceMessages(sessionKey: string, messages: AgentMessage[]): boolean {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      return false;\n    }\n\n    instance.agent.state.messages = messages;\n    return true;\n  }\n\n  /**\n   * Get messages for a session's agent\n   */\n  getMessages(sessionKey: string): AgentMessage[] | null {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      return null;\n    }\n\n    return instance.agent.state.messages;\n  }\n\n  /**\n   * Subscribe to agent events for a session\n   */\n  subscribeToSession(sessionKey: string, callback: (event: AgentEvent) => void): (() => void) | null {\n    const instance = this.agents.get(sessionKey);\n    if (!instance) {\n      return null;\n    }\n\n    return instance.agent.subscribe(callback);\n  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package/dist/src/agent/bootstrap/project-agents-context.d.ts

@@ -0,0 +1,2 @@
+import type { EmbeddedContextFile } from './types.js';
+export declare function loadProjectAgentsContextFile(workspaceDir: string): EmbeddedContextFile | null;

package/dist/src/agent/bootstrap/project-agents-context.js

@@ -0,0 +1,32 @@
+import { DEFAULT_AGENTS_FILENAME, stripFrontMatter } from "../context/workspace.js";
+import { existsSync, readFileSync } from "node:fs";
+import { join, resolve } from "node:path";
+//#region src/agent/bootstrap/project-agents-context.ts
+const PROJECT_AGENTS_MAX_CHARS = 2e4;
+function truncateProjectAgentsContent(content) {
+	if (content.length <= PROJECT_AGENTS_MAX_CHARS) return content;
+	const suffix = `\n\n[Project AGENTS.md truncated to ${PROJECT_AGENTS_MAX_CHARS} characters]`;
+	return `${content.slice(0, Math.max(0, PROJECT_AGENTS_MAX_CHARS - suffix.length)).trimEnd()}${suffix}`;
+}
+function loadProjectAgentsContextFile(workspaceDir) {
+	const agentsPath = resolve(join(workspaceDir, DEFAULT_AGENTS_FILENAME));
+	if (!existsSync(agentsPath)) return null;
+	try {
+		const content = truncateProjectAgentsContent(stripFrontMatter(readFileSync(agentsPath, "utf-8")).trim());
+		if (!content) return null;
+		return {
+			path: agentsPath,
+			content: [
+				"Workspace AGENTS.md contains project-local instructions. Follow it for this workspace's coding conventions, commands, tests, and repository-specific workflows. If it conflicts with higher-priority system instructions, tool safety, or the user's explicit request, follow the higher-priority instruction.",
+				"",
+				content
+			].join("\n")
+		};
+	} catch {
+		return null;
+	}
+}
+//#endregion
+export { loadProjectAgentsContextFile };
+
+//# sourceMappingURL=project-agents-context.js.map

package/dist/src/agent/bootstrap/project-agents-context.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"project-agents-context.js","names":[],"sources":["../../../../src/agent/bootstrap/project-agents-context.ts"],"sourcesContent":["import { existsSync, readFileSync } from 'node:fs';\nimport { join, resolve } from 'node:path';\n\nimport { stripFrontMatter, DEFAULT_AGENTS_FILENAME } from '../context/workspace.js';\nimport type { EmbeddedContextFile } from './types.js';\n\nconst PROJECT_AGENTS_MAX_CHARS = 20_000;\n\nfunction truncateProjectAgentsContent(content: string): string {\n  if (content.length <= PROJECT_AGENTS_MAX_CHARS) {\n    return content;\n  }\n  const suffix = `\\n\\n[Project AGENTS.md truncated to ${PROJECT_AGENTS_MAX_CHARS} characters]`;\n  return `${content.slice(0, Math.max(0, PROJECT_AGENTS_MAX_CHARS - suffix.length)).trimEnd()}${suffix}`;\n}\n\nexport function loadProjectAgentsContextFile(workspaceDir: string): EmbeddedContextFile | null {\n  const agentsPath = resolve(join(workspaceDir, DEFAULT_AGENTS_FILENAME));\n  if (!existsSync(agentsPath)) {\n    return null;\n  }\n\n  try {\n    const content = truncateProjectAgentsContent(stripFrontMatter(readFileSync(agentsPath, 'utf-8')).trim());\n    if (!content) {\n      return null;\n    }\n    return {\n      path: agentsPath,\n      content: [\n        'Workspace AGENTS.md contains project-local instructions. Follow it for this workspace\\'s coding conventions, commands, tests, and repository-specific workflows. If it conflicts with higher-priority system instructions, tool safety, or the user\\'s explicit request, follow the higher-priority instruction.',\n        '',\n        content,\n      ].join('\\n'),\n    };\n  } catch {\n    return null;\n  }\n}\n"],"mappings":";;;;AAMA,MAAM,2BAA2B;AAEjC,SAAS,6BAA6B,SAAyB;AAC7D,KAAI,QAAQ,UAAU,yBACpB,QAAO;CAET,MAAM,SAAS,uCAAuC,yBAAyB;AAC/E,QAAO,GAAG,QAAQ,MAAM,GAAG,KAAK,IAAI,GAAG,2BAA2B,OAAO,OAAO,CAAC,CAAC,SAAS,GAAG;;AAGhG,SAAgB,6BAA6B,cAAkD;CAC7F,MAAM,aAAa,QAAQ,KAAK,cAAc,wBAAwB,CAAC;AACvE,KAAI,CAAC,WAAW,WAAW,CACzB,QAAO;AAGT,KAAI;EACF,MAAM,UAAU,6BAA6B,iBAAiB,aAAa,YAAY,QAAQ,CAAC,CAAC,MAAM,CAAC;AACxG,MAAI,CAAC,QACH,QAAO;AAET,SAAO;GACL,MAAM;GACN,SAAS;IACP;IACA;IACA;IACD,CAAC,KAAK,KAAK;GACb;SACK;AACN,SAAO"}

package/dist/src/agent/goals/persistent-goal-service.js

@@ -1,9 +1,7 @@
 import { createLogger } from "../../utils/logger/index.js";
 import { init_logger } from "../../utils/logger.js";
-import { init_session_key, parseSessionKey } from "../../routing/session-key.js";
 import { handlePersistentGoalPostTurn } from "./post-turn.js";
 //#region src/agent/goals/persistent-goal-service.ts
-init_session_key();
 init_logger();
 const log = createLogger("PersistentGoalService");
 var PersistentGoalService = class {
@@ -23,7 +21,7 @@ var PersistentGoalService = class {
 	* follow-up message as an inbound bus event so the existing inbound loop picks it up.
 	*/
 	scheduleContinuation(sessionKey, message, routing) {
-		if (parseSessionKey(sessionKey)?.source === "webchat" && this.webchatContinuationScheduler) {
+		if (routing.channel === "webchat" && this.webchatContinuationScheduler) {
 			this.webchatContinuationScheduler(sessionKey, message);
 			return;
 		}
@@ -94,7 +92,7 @@ var PersistentGoalService = class {
 			chatId: payload.chatId,
 			inboundMetadata: payload.outboundMetadata
 		});
-		const publishVerdict = !(parseSessionKey(payload.sessionKey)?.source === "webchat") && payload.channel !== "cli" ? async (text) => {
+		const publishVerdict = !(payload.channel === "webchat") && payload.channel !== "cli" ? async (text) => {
 			await this.opts.bus.publishOutbound({
 				channel: payload.channel,
 				chat_id: payload.chatId,