@wrongstack/tools 0.295.1 → 0.296.3

package/dist/codebase-index/writer-admin.d.ts

@@ -0,0 +1,16 @@
+import type { DatabaseSync } from 'node:sqlite';
+import type { FileMeta, IndexStats } from './schema.js';
+type Statement = ReturnType<DatabaseSync['prepare']>;
+type PrepareStatement = (sql: string) => Statement;
+export declare function getAllIndexableWithStatement(stmt: PrepareStatement): Array<{
+    id: number;
+    text: string;
+}>;
+export declare function getMaxSymbolIdWithStatement(stmt: PrepareStatement): number;
+export declare function getStatsWithStatement(stmt: PrepareStatement, indexDir: string): IndexStats;
+export declare function getMetadataWithStatement(stmt: PrepareStatement, key: string): string | undefined;
+export declare function getFileMetaWithStatement(stmt: PrepareStatement, file: string): FileMeta | null;
+export declare function getAllFileMetasWithStatement(stmt: PrepareStatement): FileMeta[];
+export declare function getIndexDbSizeBytes(indexDir: string): number;
+export {};
+//# sourceMappingURL=writer-admin.d.ts.map

package/dist/codebase-index/writer-admin.d.ts.map

@@ -0,0 +1 @@
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package/dist/codebase-index/writer-bulk-insert.d.ts

@@ -0,0 +1,25 @@
+import type { DatabaseSync } from 'node:sqlite';
+import type { Ref } from './schema.js';
+type Statement = ReturnType<DatabaseSync['prepare']>;
+type PrepareStatement = (sql: string) => Statement;
+export interface BulkSymbolRow {
+    id: number;
+    lang: string;
+    kind: string;
+    name: string;
+    file: string;
+    line: number;
+    col: number;
+    signature: string;
+    docComment: string;
+    scope: string;
+    text: string;
+}
+export declare function bulkInsertSymbolsWithStatement(stmt: PrepareStatement, maxSqlVars: number, rows: BulkSymbolRow[]): void;
+export declare function bulkInsertFtsWithStatement(stmt: PrepareStatement, maxSqlVars: number, ftsAvailable: boolean, rows: Array<{
+    id: number;
+    text: string;
+}>): void;
+export declare function bulkInsertRefsWithStatement(stmt: PrepareStatement, maxSqlVars: number, refs: Ref[]): void;
+export {};
+//# sourceMappingURL=writer-bulk-insert.d.ts.map

package/dist/codebase-index/writer-bulk-insert.d.ts.map

@@ -0,0 +1 @@
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package/dist/codebase-index/writer-graph-helpers.d.ts

@@ -0,0 +1,52 @@
+import type { GraphEdge, GraphNode, SymbolLang } from './schema.js';
+/**
+ * Derive a monorepo package name from an absolute file path.
+ * Handles both `packages/<name>/...` and `apps/<name>/...` layouts.
+ */
+export declare function derivePackage(filePath: string): string | undefined;
+export declare function packageFromImport(moduleName: string): string | undefined;
+export declare function buildPackageGraphNodes(fileCounts: Array<{
+    file: string;
+    n: number;
+}>, files: Array<{
+    file: string;
+}>): {
+    pkgNodes: Map<string, GraphNode>;
+    fileToPkg: Map<string, string>;
+};
+export type WriterFileGraphSymbolRow = {
+    file: string;
+    id: number;
+    name: string;
+    kind: string;
+    lang: string;
+    line: number;
+};
+export declare function buildFileGraphNodeState(pkgSyms: WriterFileGraphSymbolRow[], localFiles: Set<string>): {
+    fileNodes: Map<string, GraphNode>;
+    symToFile: Map<number, string>;
+    fileStats: Map<string, {
+        count: number;
+        lang: SymbolLang;
+    }>;
+    ensureFileNode: (file: string) => void;
+};
+export type WriterSymbolGraphRow = {
+    id: number;
+    name: string;
+    kind: string;
+    lang: string;
+    file: string;
+    line: number;
+    signature: string;
+    scope: string;
+};
+export declare function buildSymbolGraphNodes(symById: Map<number, WriterSymbolGraphRow>, relatedIds: Set<number>, fileFilter: string): GraphNode[];
+export declare function resolveRelativeImport(fromFile: string, moduleName: string, indexedFiles: Set<string>): string | undefined;
+export type WeightedEdgeAccumulator = {
+    weight: number;
+    types: Map<string, number>;
+};
+export declare function addWeightedEdge(edgeMap: Map<string, WeightedEdgeAccumulator>, source: string | number, target: string | number, callType: string, weight: number): void;
+export declare function materializeWeightedEdges(edgeMap: Map<string, WeightedEdgeAccumulator>, idPrefix: 'pkg' | 'file' | 'sym'): GraphEdge[];
+//# sourceMappingURL=writer-graph-helpers.d.ts.map

package/dist/codebase-index/writer-graph-helpers.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"writer-graph-helpers.d.ts","sourceRoot":"","sources":["../../src/codebase-index/writer-graph-helpers.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAY,SAAS,EAAE,SAAS,EAAc,UAAU,EAAE,MAAM,aAAa,CAAC;AAE1F;;;GAGG;AACH,wBAAgB,aAAa,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,GAAG,SAAS,CAelE;AAED,wBAAgB,iBAAiB,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,GAAG,SAAS,CAIxE;AAED,wBAAgB,sBAAsB,CACpC,UAAU,EAAE,KAAK,CAAC;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC,EAC9C,KAAK,EAAE,KAAK,CAAC;IAAE,IAAI,EAAE,MAAM,CAAA;CAAE,CAAC,GAC7B;IAAE,QAAQ,EAAE,GAAG,CAAC,MAAM,EAAE,SAAS,CAAC,CAAC;IAAC,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAA;CAAE,CAyCtE;AAED,MAAM,MAAM,wBAAwB,GAAG;IACrC,IAAI,EAAE,MAAM,CAAC;IACb,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;CACd,CAAC;AAEF,wBAAgB,uBAAuB,CACrC,OAAO,EAAE,wBAAwB,EAAE,EACnC,UAAU,EAAE,GAAG,CAAC,MAAM,CAAC,GACtB;IACD,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,SAAS,CAAC,CAAC;IAClC,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IAC/B,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,UAAU,CAAA;KAAE,CAAC,CAAC;IAC5D,cAAc,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,IAAI,CAAC;CACxC,CA+BA;AAED,MAAM,MAAM,oBAAoB,GAAG;IACjC,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;CACf,CAAC;AAEF,wBAAgB,qBAAqB,CACnC,OAAO,EAAE,GAAG,CAAC,MAAM,EAAE,oBAAoB,CAAC,EAC1C,UAAU,EAAE,GAAG,CAAC,MAAM,CAAC,EACvB,UAAU,EAAE,MAAM,GACjB,SAAS,EAAE,CAuBb;AAED,wBAAgB,qBAAqB,CACnC,QAAQ,EAAE,MAAM,EAChB,UAAU,EAAE,MAAM,EAClB,YAAY,EAAE,GAAG,CAAC,MAAM,CAAC,GACxB,MAAM,GAAG,SAAS,CAsBpB;AAED,MAAM,MAAM,uBAAuB,GAAG;IACpC,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;CAC5B,CAAC;AAEF,wBAAgB,eAAe,CAC7B,OAAO,EAAE,GAAG,CAAC,MAAM,EAAE,uBAAuB,CAAC,EAC7C,MAAM,EAAE,MAAM,GAAG,MAAM,EACvB,MAAM,EAAE,MAAM,GAAG,MAAM,EACvB,QAAQ,EAAE,MAAM,EAChB,MAAM,EAAE,MAAM,GACb,IAAI,CASN;AAED,wBAAgB,wBAAwB,CACtC,OAAO,EAAE,GAAG,CAAC,MAAM,EAAE,uBAAuB,CAAC,EAC7C,QAAQ,EAAE,KAAK,GAAG,MAAM,GAAG,KAAK,GAC/B,SAAS,EAAE,CAoBb"}

package/dist/codebase-index/writer-graph-reader.d.ts

@@ -0,0 +1,11 @@
+import type { DatabaseSync } from 'node:sqlite';
+import type { CodeMapGraph, Ref } from './schema.js';
+type Statement = ReturnType<DatabaseSync['prepare']>;
+type PrepareStatement = (sql: string) => Statement;
+export declare function findRefsToWithStatement(stmt: PrepareStatement, symbolId: number): Ref[];
+export declare function findRefsFromWithStatement(stmt: PrepareStatement, symbolId: number): Ref[];
+export declare function getPackageGraphWithStatement(stmt: PrepareStatement): CodeMapGraph;
+export declare function getFileGraphWithStatement(stmt: PrepareStatement, packageFilter: string): CodeMapGraph;
+export declare function getSymbolGraphWithStatement(stmt: PrepareStatement, fileFilter: string): CodeMapGraph;
+export {};
+//# sourceMappingURL=writer-graph-reader.d.ts.map

package/dist/codebase-index/writer-graph-reader.d.ts.map

@@ -0,0 +1 @@
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package/dist/codebase-index/writer-helpers.d.ts

@@ -0,0 +1,15 @@
+import type { Ref, Symbol as IndexSymbol } from './schema.js';
+export declare function escapeLike(value: string): string;
+export declare function assignRefsToSymbols(refs: Ref[], symbols: IndexSymbol[]): Ref[];
+/**
+ * Resolve the per-project index directory. By default it lives under the
+ * global project dir (`~/.wrongstack/projects/<hash>/codebase-index`).
+ */
+export declare function resolveIndexDir(projectRoot: string, override?: string): string;
+/**
+ * Optional index-directory override carried on the run context's `meta` bag.
+ */
+export declare function codebaseIndexDirOverride(ctx: {
+    meta?: Record<string, unknown>;
+}): string | undefined;
+//# sourceMappingURL=writer-helpers.d.ts.map

package/dist/codebase-index/writer-helpers.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"writer-helpers.d.ts","sourceRoot":"","sources":["../../src/codebase-index/writer-helpers.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,GAAG,EAAE,MAAM,IAAI,WAAW,EAAE,MAAM,aAAa,CAAC;AAE9D,wBAAgB,UAAU,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAEhD;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,GAAG,EAAE,EAAE,OAAO,EAAE,WAAW,EAAE,GAAG,GAAG,EAAE,CAmB9E;AAED;;;GAGG;AACH,wBAAgB,eAAe,CAAC,WAAW,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,MAAM,GAAG,MAAM,CAE9E;AAED;;GAEG;AACH,wBAAgB,wBAAwB,CAAC,GAAG,EAAE;IAC5C,IAAI,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CAChC,GAAG,MAAM,GAAG,SAAS,CAGrB"}

package/dist/codebase-index/writer-pragmas.d.ts

@@ -0,0 +1,3 @@
+import type { DatabaseSync } from 'node:sqlite';
+export declare function applyIndexStorePragmas(db: DatabaseSync): void;
+//# sourceMappingURL=writer-pragmas.d.ts.map

package/dist/codebase-index/writer-pragmas.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"writer-pragmas.d.ts","sourceRoot":"","sources":["../../src/codebase-index/writer-pragmas.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,aAAa,CAAC;AAGhD,wBAAgB,sBAAsB,CAAC,EAAE,EAAE,YAAY,GAAG,IAAI,CAe7D"}

package/dist/codebase-index/writer-ref-mapper.d.ts

@@ -0,0 +1,11 @@
+import type { Ref } from './schema.js';
+export type WriterRefRow = {
+    id: number;
+    from_id: number;
+    to_name: string;
+    to_id: number | null;
+    call_type: string;
+    line: number;
+};
+export declare function mapWriterRefRow(row: WriterRefRow): Ref;
+//# sourceMappingURL=writer-ref-mapper.d.ts.map

package/dist/codebase-index/writer-ref-mapper.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"writer-ref-mapper.d.ts","sourceRoot":"","sources":["../../src/codebase-index/writer-ref-mapper.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,GAAG,EAAE,MAAM,aAAa,CAAC;AAEvC,MAAM,MAAM,YAAY,GAAG;IACzB,EAAE,EAAE,MAAM,CAAC;IACX,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;IAChB,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;IACrB,SAAS,EAAE,MAAM,CAAC;IAClB,IAAI,EAAE,MAAM,CAAC;CACd,CAAC;AAEF,wBAAgB,eAAe,CAAC,GAAG,EAAE,YAAY,GAAG,GAAG,CAStD"}

package/dist/codebase-index/writer-schema.d.ts

@@ -0,0 +1,7 @@
+export declare const METADATA_TABLE_SQL = "\n  CREATE TABLE IF NOT EXISTS metadata (\n    key TEXT PRIMARY KEY,\n    value TEXT NOT NULL\n  );\n";
+export declare const CORE_TABLES_SQL = "\n  CREATE TABLE IF NOT EXISTS files (\n    file TEXT PRIMARY KEY,\n    lang TEXT NOT NULL,\n    mtime_ms INTEGER NOT NULL,\n    symbol_count INTEGER NOT NULL DEFAULT 0,\n    last_indexed INTEGER NOT NULL\n  );\n  CREATE TABLE IF NOT EXISTS symbols (\n    id INTEGER PRIMARY KEY,\n    lang TEXT NOT NULL,\n    kind TEXT NOT NULL,\n    name TEXT NOT NULL,\n    file TEXT NOT NULL,\n    line INTEGER NOT NULL,\n    col INTEGER NOT NULL,\n    signature TEXT NOT NULL DEFAULT '',\n    doc_comment TEXT NOT NULL DEFAULT '',\n    scope TEXT NOT NULL DEFAULT '',\n    text TEXT NOT NULL DEFAULT '',\n    file_fk TEXT NOT NULL\n  );\n";
+export declare const SYMBOL_INDEX_SQL: readonly ['CREATE INDEX IF NOT EXISTS idx_s_name ON symbols(name)', 'CREATE INDEX IF NOT EXISTS idx_s_kind ON symbols(kind)', 'CREATE INDEX IF NOT EXISTS idx_s_lang ON symbols(lang)', 'CREATE INDEX IF NOT EXISTS idx_s_file ON symbols(file)', 'CREATE INDEX IF NOT EXISTS idx_s_lang_kind ON symbols(lang, kind)', 'CREATE INDEX IF NOT EXISTS idx_s_file_fk ON symbols(file_fk)', 'CREATE INDEX IF NOT EXISTS idx_s_name_id ON symbols(name, id)'];
+export declare const REFS_TABLE_SQL = "\n  CREATE TABLE IF NOT EXISTS refs (\n    id INTEGER PRIMARY KEY,\n    from_id INTEGER NOT NULL,\n    to_name TEXT NOT NULL,\n    to_id INTEGER,\n    call_type TEXT NOT NULL,\n    line INTEGER NOT NULL\n  );\n";
+export declare const REFS_INDEX_SQL: readonly ['CREATE INDEX IF NOT EXISTS idx_r_from ON refs(from_id)', 'CREATE INDEX IF NOT EXISTS idx_r_to_id ON refs(to_id)', 'CREATE INDEX IF NOT EXISTS idx_r_to_name ON refs(to_name)', 'CREATE INDEX IF NOT EXISTS idx_r_call_type ON refs(call_type)'];
+export declare const SYMBOLS_FTS_SQL = "CREATE VIRTUAL TABLE IF NOT EXISTS symbols_fts USING fts5(text, tokenize = 'unicode61')";
+//# sourceMappingURL=writer-schema.d.ts.map

package/dist/codebase-index/writer-schema.d.ts.map

@@ -0,0 +1 @@
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package/dist/codebase-index/writer-search-helpers.d.ts

@@ -0,0 +1,28 @@
+import type { SearchResult, SymbolKind, SymbolLang } from './schema.js';
+export interface WriterSearchFilter {
+    kind?: SymbolKind | undefined;
+    lang?: SymbolLang | undefined;
+    file?: string | undefined;
+    lspKind?: number | undefined;
+}
+export interface WriterSearchRow {
+    id: number;
+    lang: string;
+    kind: string;
+    name: string;
+    file: string;
+    line: number;
+    col: number;
+    signature: string;
+    doc_comment: string;
+    text?: string;
+    score?: number;
+    snippet?: string;
+}
+export declare function normalizeSearchLimit(limit: number | undefined): number | undefined;
+export declare function buildWriterSearchWhere(query: string, filter?: WriterSearchFilter | undefined): {
+    where: string;
+    values: unknown[];
+} | null;
+export declare function mapWriterSearchRow(row: WriterSearchRow, lspKind: number | undefined, score?: number, snippet?: string): SearchResult;
+//# sourceMappingURL=writer-search-helpers.d.ts.map

package/dist/codebase-index/writer-search-helpers.d.ts.map

@@ -0,0 +1 @@
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package/dist/codebase-index/writer-store-pool.d.ts

@@ -0,0 +1,45 @@
+interface PooledIndexStore {
+    close(): void;
+}
+type StoreFactory<TStore extends PooledIndexStore> = (projectRoot: string, opts?: {
+    indexDir?: string | undefined;
+}) => TStore;
+/**
+ * Warm-connection pool for IndexStore instances.
+ *
+ * Each (projectRoot, indexDir) pair gets one persisted store. Every read
+ * operation (search, stats, graph) acquires the store from the pool instead of
+ * opening a fresh SQLite connection, re-parsing the schema, and re-preparing
+ * statements. The connection stays warm between calls, subject to
+ * {@link DEFAULT_MAX_WARM_STORES}.
+ */
+export declare class StorePool<TStore extends PooledIndexStore> {
+    private readonly createStore;
+    private readonly maxWarmStores;
+    private readonly stores;
+    private readonly keyByStore;
+    private clock;
+    constructor(createStore: StoreFactory<TStore>, maxWarmStores?: number);
+    private key;
+    /** Borrow a store. Creates it on first access for this key. */
+    acquire(projectRoot: string, opts?: {
+        indexDir?: string | undefined;
+    }): TStore;
+    /**
+     * Return the store to the pool. The connection stays warm for reuse, but the
+     * pool may now close the least-recently-used *idle* connection to stay within
+     * {@link maxWarmStores}. A store with outstanding refs is never closed.
+     */
+    release(store: TStore): void;
+    private trim;
+    /** Close every pooled connection and drain the pool. Call on shutdown. */
+    closeAll(): void;
+    /** Remove one store from the pool. Used by tests that need isolation. */
+    evict(projectRoot: string, indexDir?: string): void;
+    /** True when the pool holds a connection for the given key. */
+    has(projectRoot: string, indexDir?: string): boolean;
+    /** Number of warm connections currently held. */
+    get size(): number;
+}
+export {};
+//# sourceMappingURL=writer-store-pool.d.ts.map

package/dist/codebase-index/writer-store-pool.d.ts.map

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package/dist/codebase-index/writer.d.ts

@@ -1,53 +1,8 @@
-import type { FileMeta, IndexStats, Ref, SearchResult, Symbol as IndexSymbol, SymbolKind, SymbolLang, CodeMapGraph } from './schema.js';
-/**
- * Resolve the per-project index directory. By default it lives under the
- * global project dir (`~/.wrongstack/projects/<hash>/codebase-index`),
- * matching every other piece of per-project state. Callers may pass an
- * explicit `override` (used by tests and any wiring that already resolved the
- * path) to avoid touching the real home directory.
- */
-export declare function resolveIndexDir(projectRoot: string, override?: string): string;
-/**
- * Optional index-directory override carried on the run context's `meta` bag.
- * Production leaves it unset (the index resolves to the global per-project
- * dir); tests and bespoke wiring set `meta.codebaseIndexDir` to redirect it.
- */
-export declare function codebaseIndexDirOverride(ctx: {
-    meta?: Record<string, unknown>;
-}): string | undefined;
-/**
- * Warm-connection pool for IndexStore instances.
- *
- * Each (projectRoot, indexDir) pair gets one persisted IndexStore. Every read
- * operation (search, stats, graph) acquires the store from the pool instead of
- * opening a fresh SQLite connection, re-parsing the schema, and re-preparing
- * statements. The connection stays warm between calls — only warm-up cost is
- * paid once per project per process lifetime.
- *
- * In WAL mode, readers coexist with the writer connection, so a single pooled
- * connection handles both reads and writes safely. The caller is responsible
- * for serializing writes (the host's promise-chain mutex does this); the pool
- * itself has no lock because the worker processes one message at a time.
- */
-export declare class StorePool {
-    private readonly stores;
-    private key;
-    /** Borrow a store. Creates it on first access for this key. */
-    acquire(projectRoot: string, opts?: {
-        indexDir?: string | undefined;
-    }): IndexStore;
-    /** Return the store to the pool. The connection stays warm for subsequent
-     * operations on the same (projectRoot, indexDir). */
-    release(_store: IndexStore): void;
-    /** Close every pooled connection and drain the pool. Call on shutdown. */
-    closeAll(): void;
-    /** Remove one store from the pool. Used by tests that need isolation. */
-    evict(projectRoot: string, indexDir?: string): void;
-    /** True when the pool holds a connection for the given key. */
-    has(projectRoot: string, indexDir?: string): boolean;
-}
-/** Process-wide singleton pool. */
-export declare const indexStorePool: StorePool;
+import type { CodeMapGraph, FileMeta, IndexStats, Symbol as IndexSymbol, Ref, SearchResult, SymbolKind, SymbolLang } from './schema.js';
+import { type WriterSearchFilter } from './writer-search-helpers.js';
+import { StorePool } from './writer-store-pool.js';
+export { codebaseIndexDirOverride, resolveIndexDir } from './writer-helpers.js';
+export { StorePool } from './writer-store-pool.js';
 export declare class IndexStore {
     private db;
     /** Absolute path to this project's index directory. */
@@ -85,23 +40,10 @@ export declare class IndexStore {
     private bm25Dirty;
     /** Prepare-once helper: compile `sql` on first use, reuse thereafter. */
     private stmt;
-    /**
-     * Execute a SQLite write operation with automatic retry on lock conflicts.
-     *
-     * When another wstack process is holding the write lock the statement first
-     * waits up to `busy_timeout` ms, then throws SQLITE_BUSY.  This wrapper catches
-     * that error and retries (up to MAX_LOCK_RETRIES) with exponential backoff,
-     * giving the competing writer time to finish and release the lock.
-     *
-     * @param fn  The write operation to execute. Can return a value which is
-     *            returned to the caller on success.
-     * @throws   {@link LockError} when all retries are exhausted on a lock conflict
-     *            (non-lock errors always propagate on the first attempt).
-     */
-    runWithRetry<T>(fn: () => T): T;
     constructor(projectRoot: string, opts?: {
         indexDir?: string | undefined;
     });
+    runWithRetry<T>(fn: () => T): T;
     private initSchema;
     private static readonly NEXT_SYMBOL_ID_KEY;
     /** Stay under typical SQLite SQLITE_MAX_VARIABLE_NUMBER (often 999). */
@@ -117,10 +59,17 @@ export declare class IndexStore {
      * so concurrent indexers cannot hand out overlapping ranges.
      */
     private allocateSymbolIds;
-    /** Multi-row INSERT for symbols — amortizes prepare/bind overhead in large batches. */
-    private bulkInsertSymbols;
-    private bulkInsertFts;
-    private bulkInsertRefs;
+    /**
+     * Disconnect inbound refs before their target symbols are replaced and
+     * return the affected names for scoped re-resolution.
+     *
+     * This also repairs a long-standing dangling-id edge case: `refs.to_id` has
+     * no physical FK, so deleting a symbol previously left callers pointing at a
+     * non-existent row.
+     */
+    private invalidateIncomingRefsForFiles;
+    /** Resolve only refs whose target names may have changed. */
+    private resolveRefsForNamesUnsafe;
     /**
      * Insert symbols, assigning IDs atomically inside `BEGIN IMMEDIATE` /
      * `COMMIT`. Id ranges come from the `next_symbol_id` metadata counter
@@ -140,12 +89,7 @@ export declare class IndexStore {
     upsertFile(meta: FileMeta): void;
     getFileMeta(file: string): FileMeta | null;
     getAllFileMetas(): FileMeta[];
-    search(query: string, filter?: {
-        kind?: SymbolKind | undefined;
-        lang?: SymbolLang | undefined;
-        file?: string | undefined;
-        lspKind?: number | undefined;
-    }, opts?: {
+    search(query: string, filter?: WriterSearchFilter, opts?: {
         limit?: number | undefined;
     }): SearchResult[];
     /** Shared WHERE builder for {@link search} / empty-query ranked totals. */
@@ -161,12 +105,7 @@ export declare class IndexStore {
      * `LIKE '%tok%'` recall for the common symbol-search shapes ("user" finds
      * "users", camelCase-split text makes "complex" find "complexOperation").
      */
-    searchRanked(query: string, filter: {
-        kind?: SymbolKind | undefined;
-        lang?: SymbolLang | undefined;
-        file?: string | undefined;
-        lspKind?: number | undefined;
-    } | undefined, limit: number): {
+    searchRanked(query: string, filter: WriterSearchFilter | undefined, limit: number): {
         results: SearchResult[];
         total: number;
     };
@@ -282,6 +221,7 @@ export declare class IndexStore {
      * that found a target — matching the previous per-row loop's return value.
      */
     resolveRefs(): number;
+    resolveRefsForNames(names: Iterable<string>): number;
     /**
      * Clear symbols/refs for a file and mark it as indexed with zero symbols.
      * Used by the indexer for empty-parse results so three writes share one txn.
@@ -289,6 +229,17 @@ export declare class IndexStore {
     replaceEmptyFile(meta: FileMeta): void;
     /** Best-effort query planner refresh after a large reindex. */
     optimize(): void;
+    /**
+     * Reclaim page churn left by repeated force rebuilds.
+     *
+     * SQLite's DROP/CREATE path makes rebuilds fast but leaves pages on the
+     * freelist. Compact only large, materially sparse databases and only when the
+     * caller is already on a full-index maintenance path.
+     */
+    compactIfNeeded(options?: {
+        minBytes?: number;
+        minFreeRatio?: number;
+    }): boolean;
     /**
      * Find all references TO a given symbol (who calls / uses this symbol?).
      */
@@ -297,15 +248,6 @@ export declare class IndexStore {
      * Find all references FROM a given symbol (what does this symbol call/use?).
      */
     findRefsFrom(symbolId: number): Ref[];
-    private sizeBytes;
-    /**
-     * Derive a monorepo package name from an absolute file path.
-     * Handles both `packages/<name>/...` (workspace) and `src/<name>/...` layouts.
-     * Returns `undefined` for files outside any recognisable package structure.
-     */
-    private static derivePackage;
-    private static packageFromImport;
-    private static resolveRelativeImport;
     /**
      * Package-level graph: each workspace package is a node; edges are derived
      * from cross-package symbol references (a symbol in package A references a
@@ -322,6 +264,47 @@ export declare class IndexStore {
      * derived from intra-file and cross-file symbol references (who calls whom).
      */
     getSymbolGraph(fileFilter: string): CodeMapGraph;
+    /**
+     * Returns every symbol in the index. Used by dead-code analysis to
+     * build the full symbol universe for the reachability scan.
+     */
+    getAllSymbols(): Array<{
+        id: number;
+        name: string;
+        file: string;
+        kind: SymbolKind;
+        line: number;
+    }>;
+    /**
+     * Returns every resolved reference (to_id IS NOT NULL). Used by
+     * dead-code analysis to build the consumer-ship graph. Refs whose
+     * target symbol id is null (unresolved imports) are excluded.
+     */
+    getAllResolvedRefs(): Array<{
+        fromId: number;
+        toId: number;
+        callType: string;
+    }>;
+    /**
+     * Returns ALL import refs (including unresolved) with their source-file
+     * path and resolved target id.  Used by the dead-code scan's file-level
+     * graph traversal to handle barrel-only entry points where no symbol
+     * carries the ref.
+     *
+     * Refs whose `from_id` doesn't match a known symbol (e.g. pure-barrel
+     * files with no declarations) will have `sourceFile === null`.
+     */
+    getAllImportRefs(): Array<{
+        /** Source-file path (null when the owning symbol can't be resolved). */
+        sourceFile: string | null;
+        toName: string;
+        /** Resolved target symbol id (null when the name couldn't be matched). */
+        toId: number | null;
+        callType: string;
+        line: number;
+    }>;
     close(): void;
 }
+/** Process-wide singleton pool. */
+export declare const indexStorePool: StorePool<IndexStore>;
 //# sourceMappingURL=writer.d.ts.map

package/dist/codebase-index/writer.d.ts.map

@@ -1 +1 @@
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package/dist/exec.js

@@ -1316,7 +1316,11 @@ var PersistentProcessRegistry = class {
   cleanupRunning = false;
   isShuttingDown = false;
   onProcessExit = () => {
-    void this.syncToPersistent();
+    this.runInBackground(
+      this.syncToPersistent(),
+      "process_registry.exit_sync_failed",
+      "PersistentProcessRegistry: exit sync failed"
+    );
   };
   constructor(baseRegistry) {
     this.instanceId = generateInstanceId();
@@ -1336,6 +1340,11 @@ var PersistentProcessRegistry = class {
       if (!isNodeError(err) || err.code !== "EEXIST") throw err;
     }
   }
+  runInBackground(operation, event, message) {
+    void operation.catch((err) => {
+      emitStructuredLog("warn", event, message, err);
+    });
+  }
   /**
    * Start the heartbeat and periodic cleanup tasks.
    */
@@ -1368,26 +1377,34 @@ var PersistentProcessRegistry = class {
       this.cleanupInterval = null;
     }
     process.off("exit", this.onProcessExit);
-    void this.syncToPersistent();
+    this.runInBackground(
+      this.syncToPersistent(),
+      "process_registry.stop_sync_failed",
+      "PersistentProcessRegistry: stop sync failed"
+    );
   }
   /**
    * Register the main WrongStack process as protected.
    */
   registerMainProcess() {
     const mainPid = process.pid;
-    this.updatePersistentEntry({
-      pid: mainPid,
-      name: "wrongstack-main",
-      command: process.argv.slice(0, 3).join(" "),
-      startedAt: Date.now(),
-      lastHeartbeat: Date.now(),
-      instanceId: this.instanceId,
-      hostname: os2.hostname(),
-      protected: true,
-      spawnMode: "main",
-      parentPid: process.ppid,
-      platform: process.platform
-    });
+    this.runInBackground(
+      this.updatePersistentEntry({
+        pid: mainPid,
+        name: "wrongstack-main",
+        command: process.argv.slice(0, 3).join(" "),
+        startedAt: Date.now(),
+        lastHeartbeat: Date.now(),
+        instanceId: this.instanceId,
+        hostname: os2.hostname(),
+        protected: true,
+        spawnMode: "main",
+        parentPid: process.ppid,
+        platform: process.platform
+      }),
+      "process_registry.main_register_failed",
+      "PersistentProcessRegistry: failed to register main process"
+    );
   }
   /**
    * Register a spawned child process with the persistent registry.
@@ -1410,7 +1427,11 @@ var PersistentProcessRegistry = class {
     if (sessionId) {
       entry.sessionId = sessionId;
     }
-    this.updatePersistentEntry(entry);
+    this.runInBackground(
+      this.updatePersistentEntry(entry),
+      "process_registry.child_register_failed",
+      "PersistentProcessRegistry: failed to register child process"
+    );
   }
   /**
    * Update or add an entry in the persistent registry.
@@ -1454,14 +1475,28 @@ var PersistentProcessRegistry = class {
   heartbeat() {
     if (this.isShuttingDown || this.heartbeatRunning) return;
     this.heartbeatRunning = true;
-    void this.syncToPersistent().finally(() => {
+    void this.syncToPersistent().catch((err) => {
+      emitStructuredLog(
+        "warn",
+        "process_registry.heartbeat_failed",
+        "PersistentProcessRegistry: heartbeat failed",
+        err
+      );
+    }).finally(() => {
       this.heartbeatRunning = false;
     });
   }
   cleanup() {
     if (this.isShuttingDown || this.cleanupRunning) return;
     this.cleanupRunning = true;
-    void this.cleanupStaleEntries().finally(() => {
+    void this.cleanupStaleEntries().catch((err) => {
+      emitStructuredLog(
+        "warn",
+        "process_registry.periodic_cleanup_failed",
+        "PersistentProcessRegistry: periodic cleanup failed",
+        err
+      );
+    }).finally(() => {
       this.cleanupRunning = false;
     });
   }