@wentorai/research-plugins 1.3.2 → 1.4.2

package/mcp-configs/academic-db/openstreetmap-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "openstreetmap-mcp",
-  "name": "OpenStreetMap MCP",
-  "description": "OpenStreetMap location services and geospatial data",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "open-streetmap-mcp",
-    "command": "npm install -g open-streetmap-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "geocode",
-    "get_map"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/open-streetmap-mcp"
-}

package/mcp-configs/academic-db/opentargets-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "opentargets-mcp",
-  "name": "Open Targets MCP",
-  "description": "Open Targets Platform GraphQL for drug target discovery",
-  "category": "academic-db",
-  "install": {
-    "runtime": "python",
-    "package": "opentargets-mcp",
-    "command": "pip install opentargets-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search_targets",
-    "get_associations",
-    "get_drugs"
-  ],
-  "verified": false,
-  "source": "https://github.com/nicosantos-mcp/opentargets-mcp"
-}

package/mcp-configs/academic-db/pdb-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "pdb-mcp",
-  "name": "Protein Data Bank MCP",
-  "description": "PDB worldwide 3D protein structure repository",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "pdb-mcp-server",
-    "command": "npm install -g pdb-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "get_structure",
-    "get_sequence"
-  ],
-  "verified": false,
-  "source": "https://github.com/ac3xx/PDB-MCP-Server"
-}

package/mcp-configs/academic-db/smithsonian-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "smithsonian-mcp",
-  "name": "Smithsonian Open Access MCP",
-  "description": "Smithsonian Institution Open Access museum collections",
-  "category": "academic-db",
-  "install": {
-    "runtime": "node",
-    "package": "smithsonian-mcp",
-    "command": "npm install -g smithsonian-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "get_item"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/smithsonian-mcp"
-}

package/mcp-configs/ai-platform/Adaptive-Graph-of-Thoughts-MCP-server.json

@@ -1,17 +0,0 @@
-{
-  "id": "Adaptive-Graph-of-Thoughts-MCP-server",
-  "name": "Adaptive Graph of Thoughts MCP Server",
-  "description": "LLM reasoning framework for scientific research using adaptive graph-of-thoughts",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "adaptive-graph-of-thoughts-mcp-server",
-    "command": "pip install adaptive-graph-of-thoughts-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["reason", "analyze"],
-  "verified": false,
-  "source": "https://github.com/SaptaDey/Adaptive-Graph-of-Thoughts-MCP-server"
-}

package/mcp-configs/ai-platform/ai-counsel.json

@@ -1,17 +0,0 @@
-{
-  "id": "ai-counsel",
-  "name": "AI Counsel",
-  "description": "Multi-round debate between AI models for reaching consensus on complex questions",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "ai-counsel",
-    "command": "pip install ai-counsel"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["debate", "vote", "converge"],
-  "verified": false,
-  "source": "https://github.com/harrison/ai-counsel"
-}

package/mcp-configs/ai-platform/atlas-mcp-server.json

@@ -1,17 +0,0 @@
-{
-  "id": "atlas-mcp-server",
-  "name": "Atlas MCP Server",
-  "description": "Neo4j-powered task management with deep research capabilities for complex projects",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "node",
-    "package": "atlas-mcp-server",
-    "command": "npx atlas-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["create_project", "manage_tasks", "deep_research"],
-  "verified": false,
-  "source": "https://github.com/cyanheads/atlas-mcp-server"
-}

package/mcp-configs/ai-platform/counsel-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "counsel-mcp",
-  "name": "Counsel MCP",
-  "description": "Strategic reasoning and multi-perspective analysis for complex decision-making",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "node",
-    "package": "counsel-mcp",
-    "command": "npx counsel-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["debate", "analyze", "advise"],
-  "verified": false,
-  "source": "https://github.com/mercurialsolo/counsel-mcp"
-}

package/mcp-configs/ai-platform/cross-llm-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "cross-llm-mcp",
-  "name": "Cross-LLM MCP",
-  "description": "Cross-LLM communication and memory sharing between different AI model instances",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "node",
-    "package": "cross-llm-mcp",
-    "command": "npx cross-llm-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["share_context", "get_memory", "sync"],
-  "verified": false,
-  "source": "https://github.com/JamesANZ/cross-llm-mcp"
-}

package/mcp-configs/ai-platform/gptr-mcp.json

@@ -1,17 +0,0 @@
-{
-  "id": "gptr-mcp",
-  "name": "GPTR MCP",
-  "description": "Deep research via GPT Researcher MCP protocol for automated report generation",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "gptr-mcp",
-    "command": "pip install gptr-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["research", "report"],
-  "verified": false,
-  "source": "https://github.com/assafelovic/gptr-mcp"
-}

package/mcp-configs/ai-platform/magi-researchers.json

@@ -1,21 +0,0 @@
-{
-  "id": "magi-researchers",
-  "name": "MAGI Researchers MCP",
-  "description": "Three AI models cross-verify for multi-perspective research",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "magi-researchers",
-    "command": "pip install magi-researchers"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "research",
-    "verify",
-    "synthesize"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/magi-researchers"
-}

package/mcp-configs/ai-platform/mcp-academic-researcher.json

@@ -1,22 +0,0 @@
-{
-  "id": "mcp-academic-researcher",
-  "name": "Academic Researcher MCP",
-  "description": "Full-stack research assistant with papers, notes, citations",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "mcp-academic-researcher",
-    "command": "pip install mcp-academic-researcher"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "take_notes",
-    "cite",
-    "analyze"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/mcp-academic-researcher"
-}

package/mcp-configs/ai-platform/open-paper-machine.json

@@ -1,21 +0,0 @@
-{
-  "id": "open-paper-machine",
-  "name": "Open Paper Machine MCP",
-  "description": "Autonomous agent for full academic paper pipeline",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "open-paper-machine",
-    "command": "pip install open-paper-machine"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "research",
-    "write",
-    "compile"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/open-paper-machine"
-}

package/mcp-configs/ai-platform/paper-intelligence.json

@@ -1,21 +0,0 @@
-{
-  "id": "paper-intelligence",
-  "name": "Paper Intelligence MCP",
-  "description": "PDF management with RAG capabilities",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "paper-intelligence",
-    "command": "pip install paper-intelligence"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "ingest",
-    "search",
-    "summarize"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/paper-intelligence"
-}

package/mcp-configs/ai-platform/paper-reader.json

@@ -1,21 +0,0 @@
-{
-  "id": "paper-reader",
-  "name": "Paper Reader MCP",
-  "description": "Search, read, and summarize arXiv papers",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "paper-reader",
-    "command": "pip install paper-reader"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "read",
-    "summarize"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/paper_reader"
-}

package/mcp-configs/ai-platform/paperdebugger.json

@@ -1,21 +0,0 @@
-{
-  "id": "paperdebugger",
-  "name": "PaperDebugger MCP",
-  "description": "Multi-agent system for in-editor academic writing",
-  "category": "ai-platform",
-  "install": {
-    "runtime": "python",
-    "package": "paperdebugger",
-    "command": "pip install paperdebugger"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "review",
-    "edit",
-    "cite"
-  ],
-  "verified": false,
-  "source": "https://github.com/jjohare/paperdebugger"
-}

package/mcp-configs/browser/decipher-research-agent.json

@@ -1,17 +0,0 @@
-{
-  "id": "decipher-research-agent",
-  "name": "Decipher Research Agent",
-  "description": "Turn topics and links into AI research notebooks with structured summaries",
-  "category": "browser",
-  "install": {
-    "runtime": "node",
-    "package": "decipher-research-agent",
-    "command": "npx decipher-research-agent"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["research", "summarize"],
-  "verified": false,
-  "source": "https://github.com/mnemox-ai/decipher-research-agent"
-}

package/mcp-configs/browser/deep-research.json

@@ -1,17 +0,0 @@
-{
-  "id": "deep-research",
-  "name": "Deep Research",
-  "description": "AI research assistant using Gemini and Google ADK for planning and compiling research",
-  "category": "browser",
-  "install": {
-    "runtime": "python",
-    "package": "deep-research",
-    "command": "pip install deep-research"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["plan_research", "execute", "compile"],
-  "verified": false,
-  "source": "https://github.com/lorenzofavaro/deep-research"
-}

package/mcp-configs/browser/everything-claude-code.json

@@ -1,17 +0,0 @@
-{
-  "id": "everything-claude-code",
-  "name": "Everything Claude Code",
-  "description": "Skills, memory, and research-first development workflows for Claude Code enhancement",
-  "category": "browser",
-  "install": {
-    "runtime": "node",
-    "package": "everything-claude-code",
-    "command": "npx everything-claude-code"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["research", "optimize"],
-  "verified": false,
-  "source": "https://github.com/affaan-m/everything-claude-code"
-}

package/mcp-configs/browser/exa-mcp.json

@@ -1,20 +0,0 @@
-{
-  "id": "exa-mcp",
-  "name": "Exa AI Search MCP",
-  "description": "Exa semantic web search for research",
-  "category": "browser",
-  "install": {
-    "runtime": "node",
-    "package": "exa-mcp-server",
-    "command": "npm install -g exa-mcp-server"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "find_similar"
-  ],
-  "verified": false,
-  "source": "https://github.com/exa-labs/exa-mcp-server"
-}

package/mcp-configs/browser/gpt-researcher.json

@@ -1,17 +0,0 @@
-{
-  "id": "gpt-researcher",
-  "name": "GPT Researcher",
-  "description": "Autonomous agent for deep research on any topic with comprehensive report generation",
-  "category": "browser",
-  "install": {
-    "runtime": "python",
-    "package": "gpt-researcher",
-    "command": "pip install gpt-researcher"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["research", "report"],
-  "verified": false,
-  "source": "https://github.com/assafelovic/gpt-researcher"
-}

package/mcp-configs/browser/heurist-agent-framework.json

@@ -1,17 +0,0 @@
-{
-  "id": "heurist-agent-framework",
-  "name": "Heurist Agent Framework",
-  "description": "Multi-interface AI agent with reasoning and research capabilities across platforms",
-  "category": "browser",
-  "install": {
-    "runtime": "python",
-    "package": "heurist-agent-framework",
-    "command": "pip install heurist-agent-framework"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": ["reason", "research", "interact"],
-  "verified": false,
-  "source": "https://github.com/heurist-network/heurist-agent-framework"
-}

package/mcp-configs/browser/mcp-searxng.json

@@ -1,21 +0,0 @@
-{
-  "id": "mcp-searxng",
-  "name": "SearXNG MCP",
-  "description": "SearXNG privacy-focused metasearch engine",
-  "category": "browser",
-  "install": {
-    "runtime": "node",
-    "package": "mcp-searxng",
-    "command": "npm install -g mcp-searxng"
-  },
-  "config": {
-    "env": {
-      "SEARXNG_URL": "http://localhost:8888"
-    }
-  },
-  "tools": [
-    "search"
-  ],
-  "verified": false,
-  "source": "https://github.com/ihor/mcp-searxng"
-}

package/mcp-configs/browser/mcp-webresearch.json

@@ -1,20 +0,0 @@
-{
-  "id": "mcp-webresearch",
-  "name": "Web Research MCP",
-  "description": "Google search and deep web research",
-  "category": "browser",
-  "install": {
-    "runtime": "node",
-    "package": "mcp-webresearch",
-    "command": "npm install -g mcp-webresearch"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "scrape"
-  ],
-  "verified": false,
-  "source": "https://github.com/nicosantos-mcp/mcp-webresearch"
-}

package/mcp-configs/cloud-docs/confluence-mcp.json

@@ -1,37 +0,0 @@
-{
-  "id": "confluence-mcp",
-  "name": "Confluence MCP",
-  "description": "Atlassian Confluence Cloud integration — search, read, and manage wiki pages and spaces for team-based research documentation.",
-  "category": "cloud-docs",
-  "install": {
-    "runtime": "node",
-    "package": "@anthropic/mcp-server-atlassian-confluence",
-    "command": "npm install @anthropic/mcp-server-atlassian-confluence"
-  },
-  "config": {
-    "env": {
-      "CONFLUENCE_URL": {
-        "description": "Confluence Cloud instance URL (e.g. https://yoursite.atlassian.net)",
-        "required": true
-      },
-      "CONFLUENCE_USERNAME": {
-        "description": "Atlassian account email address",
-        "required": true
-      },
-      "CONFLUENCE_API_TOKEN": {
-        "description": "Atlassian API token (generate at id.atlassian.com)",
-        "required": true
-      }
-    }
-  },
-  "tools": [
-    "search_content",
-    "get_page",
-    "create_page",
-    "update_page",
-    "list_spaces",
-    "get_space"
-  ],
-  "verified": false,
-  "source": "https://github.com/aashari/mcp-server-atlassian-confluence"
-}

package/mcp-configs/cloud-docs/google-drive-mcp.json

@@ -1,35 +0,0 @@
-{
-  "id": "google-drive-mcp",
-  "name": "Google Drive MCP",
-  "description": "Google Drive document access for AI — search, read, and list files across Google Docs, Sheets, Slides, and PDFs stored in Drive.",
-  "category": "cloud-docs",
-  "install": {
-    "runtime": "node",
-    "package": "@anthropic/mcp-server-google-drive",
-    "command": "npm install @anthropic/mcp-server-google-drive"
-  },
-  "config": {
-    "env": {
-      "GOOGLE_CLIENT_ID": {
-        "description": "Google OAuth 2.0 client ID",
-        "required": true
-      },
-      "GOOGLE_CLIENT_SECRET": {
-        "description": "Google OAuth 2.0 client secret",
-        "required": true
-      },
-      "GOOGLE_REFRESH_TOKEN": {
-        "description": "Google OAuth 2.0 refresh token",
-        "required": true
-      }
-    }
-  },
-  "tools": [
-    "search_files",
-    "read_file",
-    "list_files",
-    "get_file_metadata"
-  ],
-  "verified": false,
-  "source": "https://github.com/anthropics/mcp-server-google-drive"
-}

package/mcp-configs/cloud-docs/notion-mcp.json

@@ -1,29 +0,0 @@
-{
-  "id": "notion-mcp",
-  "name": "Notion MCP",
-  "description": "Notion integration for AI assistants — search, read, create, and update Notion pages, databases, and blocks directly from your research workflow.",
-  "category": "cloud-docs",
-  "install": {
-    "runtime": "node",
-    "package": "notion-mcp",
-    "command": "npm install notion-mcp"
-  },
-  "config": {
-    "env": {
-      "NOTION_TOKEN": {
-        "description": "Notion internal integration token (starts with ntn_)",
-        "required": true
-      }
-    }
-  },
-  "tools": [
-    "search_pages",
-    "read_page",
-    "create_page",
-    "update_page",
-    "query_database",
-    "list_databases"
-  ],
-  "verified": false,
-  "source": "https://github.com/Badhansen/notion-mcp"
-}

package/mcp-configs/communication/discord-mcp.json

@@ -1,29 +0,0 @@
-{
-  "id": "discord-mcp",
-  "name": "Discord MCP",
-  "description": "Discord server integration for research teams — send messages, read channels, manage threads, and interact with server members.",
-  "category": "communication",
-  "install": {
-    "runtime": "node",
-    "package": "mcp-discord",
-    "command": "npm install mcp-discord"
-  },
-  "config": {
-    "env": {
-      "DISCORD_BOT_TOKEN": {
-        "description": "Discord bot token from the Developer Portal",
-        "required": true
-      }
-    }
-  },
-  "tools": [
-    "send_message",
-    "read_messages",
-    "list_channels",
-    "list_guilds",
-    "create_thread",
-    "add_reaction"
-  ],
-  "verified": false,
-  "source": "https://github.com/v-3/mcp-discord"
-}

package/mcp-configs/communication/discourse-mcp.json

@@ -1,21 +0,0 @@
-{
-  "id": "discourse-mcp",
-  "name": "Discourse Forum MCP",
-  "description": "Official Discourse forum integration for academic communities",
-  "category": "communication",
-  "install": {
-    "runtime": "node",
-    "package": "discourse-mcp",
-    "command": "npm install -g discourse-mcp"
-  },
-  "config": {
-    "env": {}
-  },
-  "tools": [
-    "search",
-    "get_topic",
-    "create_post"
-  ],
-  "verified": false,
-  "source": "https://github.com/discourse/discourse-mcp"
-}