@weng-lab/visualization 2.6.0-beta.1 → 2.6.0

package/dist/visualization.es81.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es81.js","sources":["../src/components/Histogram/HistogramBar.tsx"],"sourcesContent":["import React, { memo, useState } from 'react';\nimport { Bar } from '@visx/shape';\nimport { motion } from 'framer-motion';\nimport { getAnimationProps, AnimationType } from '../../utility';\nimport { HistogramBin } from './types';\nimport { HistogramTooltipHandle } from './HistogramTooltip';\n\nexport interface HistogramBarProps {\n    bin: HistogramBin;\n    x: number;\n    barWidth: number;\n    yScale: (v: number) => number;\n    animationType?: AnimationType;\n    binIndex: number;\n    svgRef: React.RefObject<SVGSVGElement | null>;\n    tooltipRef: React.RefObject<HistogramTooltipHandle | null>;\n    onBarClicked?: (bin: HistogramBin) => void;\n}\n\n//memoize so that entire chart doesnt re-render on hover, just the hovered bar\nconst HistogramBar = memo(({ bin, x, barWidth, yScale, animationType, binIndex, svgRef, tooltipRef, onBarClicked }: HistogramBarProps) => {\n    const [isHovered, setIsHovered] = useState(false);\n\n    const Wrapper = animationType ? motion.g : 'g';\n    const animProps = getAnimationProps(animationType, binIndex);\n\n    let totCount = 0;\n    const segments = bin.series.map((s, si) => {\n        const start = totCount;\n        totCount += s.count;\n        return { s, si, segY: yScale(start + s.count), segHeight: Math.max(yScale(start) - yScale(start + s.count), 0) };\n    });\n\n    return (\n        <Wrapper\n            {...animProps}\n            onMouseEnter={(e: React.MouseEvent) => {\n                setIsHovered(true);\n                const rect = svgRef.current?.getBoundingClientRect();\n                tooltipRef.current?.show(bin, rect ? e.clientX - rect.left + 10 : e.pageX, rect ? e.clientY - rect.top : e.pageY);\n            }}\n            onMouseMove={(e: React.MouseEvent) => {\n                const rect = svgRef.current?.getBoundingClientRect();\n                tooltipRef.current?.show(bin, rect ? e.clientX - rect.left + 10 : e.pageX, rect ? e.clientY - rect.top : e.pageY);\n            }}\n            onMouseLeave={() => {\n                setIsHovered(false);\n                tooltipRef.current?.hide();\n            }}\n        >\n            {segments.map(({ s, si, segY, segHeight }) => (\n                <Bar\n                    key={`seg-${si}`}\n                    x={x}\n                    y={segY}\n                    width={barWidth}\n                    height={segHeight}\n                    fill={s.color}\n                    opacity={0.85}\n                    stroke={isHovered ? '#000000' : 'none'}\n                    style={{ cursor: onBarClicked ? 'pointer' : 'default' }}\n                    onClick={() => onBarClicked?.(bin)}\n                />\n            ))}\n        </Wrapper>\n    );\n});\n\nexport default HistogramBar;\n"],"names":["HistogramBar","memo","bin","x","barWidth","yScale","animationType","binIndex","svgRef","tooltipRef","onBarClicked","isHovered","setIsHovered","useState","Wrapper","motion","g","animProps","getAnimationProps","totCount","segments","series","map","s","si","start","count","segY","segHeight","Math","max","e","rect","current","getBoundingClientRect","show","clientX","left","pageX","clientY","top","pageY","hide","jsx","Bar","color","cursor"],"mappings":";;;;;AAoBA,MAAMA,IAAeC,EAAK,CAAC;AAAA,EAAEC,KAAAA;AAAAA,EAAKC,GAAAA;AAAAA,EAAGC,UAAAA;AAAAA,EAAUC,QAAAA;AAAAA,EAAQC,eAAAA;AAAAA,EAAeC,UAAAA;AAAAA,EAAUC,QAAAA;AAAAA,EAAQC,YAAAA;AAAAA,EAAYC,cAAAA;AAAgC,MAAM;AACtI,QAAM,CAACC,GAAWC,CAAY,IAAIC,EAAS,EAAK,GAE1CC,IAAUR,IAAgBS,EAAOC,IAAI,KACrCC,IAAYC,EAAkBZ,GAAeC,CAAQ;AAE3D,MAAIY,IAAW;AACf,QAAMC,IAAWlB,EAAImB,OAAOC,IAAI,CAACC,GAAGC,MAAO;AACvC,UAAMC,IAAQN;AACdA,WAAAA,KAAYI,EAAEG,OACP;AAAA,MAAEH,GAAAA;AAAAA,MAAGC,IAAAA;AAAAA,MAAIG,MAAMtB,EAAOoB,IAAQF,EAAEG,KAAK;AAAA,MAAGE,WAAWC,KAAKC,IAAIzB,EAAOoB,CAAK,IAAIpB,EAAOoB,IAAQF,EAAEG,KAAK,GAAG,CAAC;AAAA,IAAA;AAAA,EACjH,CAAC;AAED,2BACKZ,GAAA,EACG,GAAIG,GACJ,cAAc,CAACc,MAAwB;AACnCnB,IAAAA,EAAa,EAAI;AACjB,UAAMoB,IAAOxB,EAAOyB,SAASC,sBAAAA;AAC7BzB,IAAAA,EAAWwB,SAASE,KAAKjC,GAAK8B,IAAOD,EAAEK,UAAUJ,EAAKK,OAAO,KAAKN,EAAEO,OAAON,IAAOD,EAAEQ,UAAUP,EAAKQ,MAAMT,EAAEU,KAAK;AAAA,EACpH,GACA,aAAa,CAACV,MAAwB;AAClC,UAAMC,IAAOxB,EAAOyB,SAASC,sBAAAA;AAC7BzB,IAAAA,EAAWwB,SAASE,KAAKjC,GAAK8B,IAAOD,EAAEK,UAAUJ,EAAKK,OAAO,KAAKN,EAAEO,OAAON,IAAOD,EAAEQ,UAAUP,EAAKQ,MAAMT,EAAEU,KAAK;AAAA,EACpH,GACA,cAAc,MAAM;AAChB7B,IAAAA,EAAa,EAAK,GAClBH,EAAWwB,SAASS,KAAAA;AAAAA,EACxB,GAECtB,UAAAA,EAASE,IAAI,CAAC;AAAA,IAAEC,GAAAA;AAAAA,IAAGC,IAAAA;AAAAA,IAAIG,MAAAA;AAAAA,IAAMC,WAAAA;AAAAA,EAAAA,MAC1B,gBAAAe,EAACC,GAAA,EAEG,GAAAzC,GACA,GAAGwB,GACH,OAAOvB,GACP,QAAQwB,GACR,MAAML,EAAEsB,OACR,SAAS,MACT,QAAQlC,IAAY,YAAY,QAChC,OAAO;AAAA,IAAEmC,QAAQpC,IAAe,YAAY;AAAA,EAAA,GAC5C,SAAS,MAAMA,IAAeR,CAAG,KAT5B,OAAOsB,CAAE,EASqB,CAE1C,GACL;AAER,CAAC;"}
+{"version":3,"file":"visualization.es81.js","sources":["../../../node_modules/.pnpm/@visx+legend@4.0.0_@types+react@19.2.14_react@19.2.4/node_modules/@visx/legend/esm/legends/Ordinal.js"],"sourcesContent":["import Legend from \"./Legend/index.js\"; // eslint-disable-next-line @typescript-eslint/no-explicit-any\nimport { jsx as _jsx } from \"react/jsx-runtime\";\n/** Ordinal scales map from strings to an Output type. */\nexport default function Ordinal(props) {\n  return /*#__PURE__*/_jsx(Legend, {\n    ...props\n  });\n}"],"names":["Ordinal","props","_jsx","Legend"],"mappings":";;AAGe,SAASA,EAAQC,GAAO;AACrC,SAAoBC,gBAAAA,EAAKC,GAAQ;AAAA,IAC/B,GAAGF;AAAA,EACP,CAAG;AACH;","x_google_ignoreList":[0]}

package/dist/visualization.es82.js

@@ -1,59 +1,11 @@
-import { slice as F } from "./visualization.es490.js";
-import { bisectRight as j } from "./visualization.es484.js";
-import b from "./visualization.es491.js";
-import w from "./visualization.es489.js";
-import I from "./visualization.es492.js";
-import R from "./visualization.es493.js";
-import S, { tickIncrement as z } from "./visualization.es84.js";
-import q from "./visualization.es494.js";
-function L() {
-  var A = I, h = w, v = q;
-  function s(i) {
-    Array.isArray(i) || (i = Array.from(i));
-    var r, c = i.length, o, m, u = new Array(c);
-    for (r = 0; r < c; ++r)
-      u[r] = A(i[r], r, i);
-    var k = h(u), e = k[0], t = k[1], n = v(u, e, t);
-    if (!Array.isArray(n)) {
-      const g = t, x = +n;
-      if (h === w && ([e, t] = R(e, t, x)), n = S(e, t, x), n[0] <= e && (m = z(e, t, x)), n[n.length - 1] >= t)
-        if (g >= t && h === w) {
-          const l = z(e, t, x);
-          isFinite(l) && (l > 0 ? t = (Math.floor(t / l) + 1) * l : l < 0 && (t = (Math.ceil(t * -l) + 1) / -l));
-        } else
-          n.pop();
-    }
-    for (var f = n.length, a = 0, p = f; n[a] <= e; ) ++a;
-    for (; n[p - 1] > t; ) --p;
-    (a || p < f) && (n = n.slice(a, p), f = p - a);
-    var y = new Array(f + 1), M;
-    for (r = 0; r <= f; ++r)
-      M = y[r] = [], M.x0 = r > 0 ? n[r - 1] : e, M.x1 = r < f ? n[r] : t;
-    if (isFinite(m)) {
-      if (m > 0)
-        for (r = 0; r < c; ++r)
-          (o = u[r]) != null && e <= o && o <= t && y[Math.min(f, Math.floor((o - e) / m))].push(i[r]);
-      else if (m < 0) {
-        for (r = 0; r < c; ++r)
-          if ((o = u[r]) != null && e <= o && o <= t) {
-            const g = Math.floor((e - o) * m);
-            y[Math.min(f, g + (n[g] <= o))].push(i[r]);
-          }
-      }
-    } else
-      for (r = 0; r < c; ++r)
-        (o = u[r]) != null && e <= o && o <= t && y[j(n, o, 0, f)].push(i[r]);
-    return y;
-  }
-  return s.value = function(i) {
-    return arguments.length ? (A = typeof i == "function" ? i : b(i), s) : A;
-  }, s.domain = function(i) {
-    return arguments.length ? (h = typeof i == "function" ? i : b([i[0], i[1]]), s) : h;
-  }, s.thresholds = function(i) {
-    return arguments.length ? (v = typeof i == "function" ? i : b(Array.isArray(i) ? F.call(i) : i), s) : v;
-  }, s;
+import e from "./visualization.es135.js";
+import a from "./visualization.es139.js";
+const n = e("domain", "range", "reverse", "unknown");
+function i(r) {
+  return n(a(), r);
 }
 export {
-  L as default
+  i as default,
+  n as updateOrdinalScale
 };
 //# sourceMappingURL=visualization.es82.js.map

package/dist/visualization.es82.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es82.js","sources":["../../../node_modules/.pnpm/d3-array@3.2.1/node_modules/d3-array/src/bin.js"],"sourcesContent":["import {slice} from \"./array.js\";\nimport bisect from \"./bisect.js\";\nimport constant from \"./constant.js\";\nimport extent from \"./extent.js\";\nimport identity from \"./identity.js\";\nimport nice from \"./nice.js\";\nimport ticks, {tickIncrement} from \"./ticks.js\";\nimport sturges from \"./threshold/sturges.js\";\n\nexport default function bin() {\n  var value = identity,\n      domain = extent,\n      threshold = sturges;\n\n  function histogram(data) {\n    if (!Array.isArray(data)) data = Array.from(data);\n\n    var i,\n        n = data.length,\n        x,\n        step,\n        values = new Array(n);\n\n    for (i = 0; i < n; ++i) {\n      values[i] = value(data[i], i, data);\n    }\n\n    var xz = domain(values),\n        x0 = xz[0],\n        x1 = xz[1],\n        tz = threshold(values, x0, x1);\n\n    // Convert number of thresholds into uniform thresholds, and nice the\n    // default domain accordingly.\n    if (!Array.isArray(tz)) {\n      const max = x1, tn = +tz;\n      if (domain === extent) [x0, x1] = nice(x0, x1, tn);\n      tz = ticks(x0, x1, tn);\n\n      // If the domain is aligned with the first tick (which it will by\n      // default), then we can use quantization rather than bisection to bin\n      // values, which is substantially faster.\n      if (tz[0] <= x0) step = tickIncrement(x0, x1, tn);\n\n      // If the last threshold is coincident with the domain’s upper bound, the\n      // last bin will be zero-width. If the default domain is used, and this\n      // last threshold is coincident with the maximum input value, we can\n      // extend the niced upper bound by one tick to ensure uniform bin widths;\n      // otherwise, we simply remove the last threshold. Note that we don’t\n      // coerce values or the domain to numbers, and thus must be careful to\n      // compare order (>=) rather than strict equality (===)!\n      if (tz[tz.length - 1] >= x1) {\n        if (max >= x1 && domain === extent) {\n          const step = tickIncrement(x0, x1, tn);\n          if (isFinite(step)) {\n            if (step > 0) {\n              x1 = (Math.floor(x1 / step) + 1) * step;\n            } else if (step < 0) {\n              x1 = (Math.ceil(x1 * -step) + 1) / -step;\n            }\n          }\n        } else {\n          tz.pop();\n        }\n      }\n    }\n\n    // Remove any thresholds outside the domain.\n    // Be careful not to mutate an array owned by the user!\n    var m = tz.length, a = 0, b = m;\n    while (tz[a] <= x0) ++a;\n    while (tz[b - 1] > x1) --b;\n    if (a || b < m) tz = tz.slice(a, b), m = b - a;\n\n    var bins = new Array(m + 1),\n        bin;\n\n    // Initialize bins.\n    for (i = 0; i <= m; ++i) {\n      bin = bins[i] = [];\n      bin.x0 = i > 0 ? tz[i - 1] : x0;\n      bin.x1 = i < m ? tz[i] : x1;\n    }\n\n    // Assign data to bins by value, ignoring any outside the domain.\n    if (isFinite(step)) {\n      if (step > 0) {\n        for (i = 0; i < n; ++i) {\n          if ((x = values[i]) != null && x0 <= x && x <= x1) {\n            bins[Math.min(m, Math.floor((x - x0) / step))].push(data[i]);\n          }\n        }\n      } else if (step < 0) {\n        for (i = 0; i < n; ++i) {\n          if ((x = values[i]) != null && x0 <= x && x <= x1) {\n            const j = Math.floor((x0 - x) * step);\n            bins[Math.min(m, j + (tz[j] <= x))].push(data[i]); // handle off-by-one due to rounding\n          }\n        }\n      }\n    } else {\n      for (i = 0; i < n; ++i) {\n        if ((x = values[i]) != null && x0 <= x && x <= x1) {\n          bins[bisect(tz, x, 0, m)].push(data[i]);\n        }\n      }\n    }\n\n    return bins;\n  }\n\n  histogram.value = function(_) {\n    return arguments.length ? (value = typeof _ === \"function\" ? _ : constant(_), histogram) : value;\n  };\n\n  histogram.domain = function(_) {\n    return arguments.length ? (domain = typeof _ === \"function\" ? _ : constant([_[0], _[1]]), histogram) : domain;\n  };\n\n  histogram.thresholds = function(_) {\n    return arguments.length ? (threshold = typeof _ === \"function\" ? _ : constant(Array.isArray(_) ? slice.call(_) : _), histogram) : threshold;\n  };\n\n  return histogram;\n}\n"],"names":["bin","value","identity","domain","extent","threshold","sturges","histogram","data","i","n","x","step","values","xz","x0","x1","tz","max","tn","nice","ticks","tickIncrement","m","b","bins","j","bisect","_","constant","slice"],"mappings":";;;;;;;;AASe,SAASA,IAAM;AAC5B,MAAIC,IAAQC,GACRC,IAASC,GACTC,IAAYC;AAEhB,WAASC,EAAUC,GAAM;AACvB,IAAK,MAAM,QAAQA,CAAI,MAAGA,IAAO,MAAM,KAAKA,CAAI;AAEhD,QAAIC,GACAC,IAAIF,EAAK,QACTG,GACAC,GACAC,IAAS,IAAI,MAAMH,CAAC;AAExB,SAAKD,IAAI,GAAGA,IAAIC,GAAG,EAAED;AACnB,MAAAI,EAAOJ,CAAC,IAAIR,EAAMO,EAAKC,CAAC,GAAGA,GAAGD,CAAI;AAGpC,QAAIM,IAAKX,EAAOU,CAAM,GAClBE,IAAKD,EAAG,CAAC,GACTE,IAAKF,EAAG,CAAC,GACTG,IAAKZ,EAAUQ,GAAQE,GAAIC,CAAE;AAIjC,QAAI,CAAC,MAAM,QAAQC,CAAE,GAAG;AACtB,YAAMC,IAAMF,GAAIG,IAAK,CAACF;AAgBtB,UAfId,MAAWC,MAAQ,CAACW,GAAIC,CAAE,IAAII,EAAKL,GAAIC,GAAIG,CAAE,IACjDF,IAAKI,EAAMN,GAAIC,GAAIG,CAAE,GAKjBF,EAAG,CAAC,KAAKF,MAAIH,IAAOU,EAAcP,GAAIC,GAAIG,CAAE,IAS5CF,EAAGA,EAAG,SAAS,CAAC,KAAKD;AACvB,YAAIE,KAAOF,KAAMb,MAAWC,GAAQ;AAClC,gBAAMQ,IAAOU,EAAcP,GAAIC,GAAIG,CAAE;AACrC,UAAI,SAASP,CAAI,MACXA,IAAO,IACTI,KAAM,KAAK,MAAMA,IAAKJ,CAAI,IAAI,KAAKA,IAC1BA,IAAO,MAChBI,KAAM,KAAK,KAAKA,IAAK,CAACJ,CAAI,IAAI,KAAK,CAACA;AAAA,QAG1C;AACE,UAAAK,EAAG,IAAG;AAAA,IAGZ;AAKA,aADIM,IAAIN,EAAG,QAAQ,IAAI,GAAGO,IAAID,GACvBN,EAAG,CAAC,KAAKF,IAAI,GAAE;AACtB,WAAOE,EAAGO,IAAI,CAAC,IAAIR,IAAI,GAAEQ;AACzB,KAAI,KAAKA,IAAID,OAAGN,IAAKA,EAAG,MAAM,GAAGO,CAAC,GAAGD,IAAIC,IAAI;AAE7C,QAAIC,IAAO,IAAI,MAAMF,IAAI,CAAC,GACtBvB;AAGJ,SAAKS,IAAI,GAAGA,KAAKc,GAAG,EAAEd;AACpB,MAAAT,IAAMyB,EAAKhB,CAAC,IAAI,CAAA,GAChBT,EAAI,KAAKS,IAAI,IAAIQ,EAAGR,IAAI,CAAC,IAAIM,GAC7Bf,EAAI,KAAKS,IAAIc,IAAIN,EAAGR,CAAC,IAAIO;AAI3B,QAAI,SAASJ,CAAI;AACf,UAAIA,IAAO;AACT,aAAKH,IAAI,GAAGA,IAAIC,GAAG,EAAED;AACnB,WAAKE,IAAIE,EAAOJ,CAAC,MAAM,QAAQM,KAAMJ,KAAKA,KAAKK,KAC7CS,EAAK,KAAK,IAAIF,GAAG,KAAK,OAAOZ,IAAII,KAAMH,CAAI,CAAC,CAAC,EAAE,KAAKJ,EAAKC,CAAC,CAAC;AAAA,eAGtDG,IAAO;AAChB,aAAKH,IAAI,GAAGA,IAAIC,GAAG,EAAED;AACnB,eAAKE,IAAIE,EAAOJ,CAAC,MAAM,QAAQM,KAAMJ,KAAKA,KAAKK,GAAI;AACjD,kBAAMU,IAAI,KAAK,OAAOX,IAAKJ,KAAKC,CAAI;AACpC,YAAAa,EAAK,KAAK,IAAIF,GAAGG,KAAKT,EAAGS,CAAC,KAAKf,EAAE,CAAC,EAAE,KAAKH,EAAKC,CAAC,CAAC;AAAA,UAClD;AAAA;AAAA;AAIJ,WAAKA,IAAI,GAAGA,IAAIC,GAAG,EAAED;AACnB,SAAKE,IAAIE,EAAOJ,CAAC,MAAM,QAAQM,KAAMJ,KAAKA,KAAKK,KAC7CS,EAAKE,EAAOV,GAAIN,GAAG,GAAGY,CAAC,CAAC,EAAE,KAAKf,EAAKC,CAAC,CAAC;AAK5C,WAAOgB;AAAA,EACT;AAEA,SAAAlB,EAAU,QAAQ,SAASqB,GAAG;AAC5B,WAAO,UAAU,UAAU3B,IAAQ,OAAO2B,KAAM,aAAaA,IAAIC,EAASD,CAAC,GAAGrB,KAAaN;AAAA,EAC7F,GAEAM,EAAU,SAAS,SAASqB,GAAG;AAC7B,WAAO,UAAU,UAAUzB,IAAS,OAAOyB,KAAM,aAAaA,IAAIC,EAAS,CAACD,EAAE,CAAC,GAAGA,EAAE,CAAC,CAAC,CAAC,GAAGrB,KAAaJ;AAAA,EACzG,GAEAI,EAAU,aAAa,SAASqB,GAAG;AACjC,WAAO,UAAU,UAAUvB,IAAY,OAAOuB,KAAM,aAAaA,IAAIC,EAAS,MAAM,QAAQD,CAAC,IAAIE,EAAM,KAAKF,CAAC,IAAIA,CAAC,GAAGrB,KAAaF;AAAA,EACpI,GAEOE;AACT;","x_google_ignoreList":[0]}
+{"version":3,"file":"visualization.es82.js","sources":["../../../node_modules/.pnpm/@visx+scale@4.0.0/node_modules/@visx/scale/esm/scales/ordinal.js"],"sourcesContent":["import { scaleOrdinal } from '@visx/vendor/d3-scale';\nimport scaleOperator from \"../operators/scaleOperator.js\";\nexport const updateOrdinalScale = scaleOperator('domain', 'range', 'reverse', 'unknown');\nexport default function createOrdinalScale(config) {\n  return updateOrdinalScale(scaleOrdinal(), config);\n}"],"names":["updateOrdinalScale","scaleOperator","createOrdinalScale","config","scaleOrdinal"],"mappings":";;AAEY,MAACA,IAAqBC,EAAc,UAAU,SAAS,WAAW,SAAS;AACxE,SAASC,EAAmBC,GAAQ;AACjD,SAAOH,EAAmBI,EAAY,GAAID,CAAM;AAClD;","x_google_ignoreList":[0]}

package/dist/visualization.es83.js

@@ -1,10 +1,32 @@
-function l(n, e, a) {
-  n = +n, e = +e, a = (g = arguments.length) < 2 ? (e = n, n = 0, 1) : g < 3 ? 1 : +a;
-  for (var h = -1, g = Math.max(0, Math.ceil((e - n) / a)) | 0, i = new Array(g); ++h < g; )
-    i[h] = n + h * a;
-  return i;
-}
+import { jsxs as a, jsx as e } from "react/jsx-runtime";
+import { memo as o } from "react";
+import { ControlPanel as c } from "./visualization.es127.js";
+import { ZoomSurface as d } from "./visualization.es128.js";
+import { TOTAL_INNER_DIAMETER as n } from "./visualization.es7.js";
+import m from "./visualization.es30.js";
+const x = o(function({
+  zoom: r,
+  totalWidth: i,
+  totalHeight: t,
+  children: g,
+  toggleBranchLength: s
+}) {
+  return /* @__PURE__ */ a("div", { style: {
+    position: "relative",
+    width: i,
+    height: t
+  }, children: [
+    /* @__PURE__ */ e(c, { scaleZoom: r.scale, resetZoom: r.reset, toggleBranchLength: s }),
+    /* @__PURE__ */ a("svg", { width: i, height: t, style: {
+      cursor: r.isDragging ? "grabbing" : "grab",
+      touchAction: "none"
+    }, viewBox: `0 0 ${n} ${n}`, preserveAspectRatio: "xMidYMid meet", ref: r.containerRef, children: [
+      /* @__PURE__ */ e(d, { dragStart: r.dragStart, dragEnd: r.dragEnd, dragMove: r.dragMove, scale: r.scale, isDragging: r.isDragging }),
+      /* @__PURE__ */ e(m, { transform: r.toString(), children: g })
+    ] })
+  ] });
+});
 export {
-  l as default
+  x as ZoomFrame
 };
 //# sourceMappingURL=visualization.es83.js.map

package/dist/visualization.es83.js.map

@@ -1 +1 @@
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+{"version":3,"file":"visualization.es83.js","sources":["../src/components/PhyloTree/ZoomFrame.tsx"],"sourcesContent":["import { ProvidedZoom } from \"@visx/zoom\";\nimport { memo, ReactNode, useState } from \"react\";\nimport { ZoomState } from \"./types\";\nimport { ControlPanel } from \"./ControlPanel\";\nimport { ZoomSurface } from \"./ZoomSurface\";\nimport { Group } from \"@visx/group\";\nimport { TOTAL_INNER_DIAMETER } from \"./PhyloTree\";\n\nexport type ZoomFrameProps = {\n  zoom: ProvidedZoom<SVGSVGElement> & ZoomState;\n  totalHeight: number;\n  totalWidth: number;\n  toggleBranchLength: () => void;\n  children: ReactNode\n};\n\nexport const ZoomFrame = memo(function({ zoom, totalWidth, totalHeight, children, toggleBranchLength }: ZoomFrameProps) {\n  return (\n    <div\n      style={{\n        position: \"relative\",\n        width: totalWidth,\n        height: totalHeight,\n      }}\n    >\n      <ControlPanel scaleZoom={zoom.scale} resetZoom={zoom.reset} toggleBranchLength={toggleBranchLength} />\n      <svg\n        width={totalWidth}\n        height={totalHeight}\n        style={{ cursor: zoom.isDragging ? \"grabbing\" : \"grab\", touchAction: \"none\" }}\n        viewBox={`0 0 ${TOTAL_INNER_DIAMETER} ${TOTAL_INNER_DIAMETER}`}\n        preserveAspectRatio=\"xMidYMid meet\"\n        ref={zoom.containerRef}\n      >\n        <ZoomSurface\n          dragStart={zoom.dragStart}\n          dragEnd={zoom.dragEnd}\n          dragMove={zoom.dragMove}\n          scale={zoom.scale}\n          isDragging={zoom.isDragging}\n        />\n        <Group transform={zoom.toString()}>\n          {children}\n        </Group>\n      </svg>\n    </div>\n  );\n});\n"],"names":["ZoomFrame","memo","zoom","totalWidth","totalHeight","children","toggleBranchLength","jsxs","position","width","height","jsx","ControlPanel","scale","reset","cursor","isDragging","touchAction","TOTAL_INNER_DIAMETER","containerRef","ZoomSurface","dragStart","dragEnd","dragMove","Group","toString"],"mappings":";;;;;;AAgBO,MAAMA,IAAYC,EAAK,SAAS;AAAA,EAAEC,MAAAA;AAAAA,EAAMC,YAAAA;AAAAA,EAAYC,aAAAA;AAAAA,EAAaC,UAAAA;AAAAA,EAAUC,oBAAAA;AAAmC,GAAG;AACtH,SACE,gBAAAC,EAAC,SACC,OAAO;AAAA,IACLC,UAAU;AAAA,IACVC,OAAON;AAAAA,IACPO,QAAQN;AAAAA,EAAAA,GAGV,UAAA;AAAA,IAAA,gBAAAO,EAACC,KAAa,WAAWV,EAAKW,OAAO,WAAWX,EAAKY,OAAO,oBAAAR,GAAuC;AAAA,sBAClG,OAAA,EACC,OAAOH,GACP,QAAQC,GACR,OAAO;AAAA,MAAEW,QAAQb,EAAKc,aAAa,aAAa;AAAA,MAAQC,aAAa;AAAA,IAAA,GACrE,SAAS,OAAOC,CAAoB,IAAIA,CAAoB,IAC5D,qBAAoB,iBACpB,KAAKhB,EAAKiB,cAEV,UAAA;AAAA,MAAA,gBAAAR,EAACS,GAAA,EACC,WAAWlB,EAAKmB,WAChB,SAASnB,EAAKoB,SACd,UAAUpB,EAAKqB,UACf,OAAOrB,EAAKW,OACZ,YAAYX,EAAKc,YAAW;AAAA,wBAE7BQ,GAAA,EAAM,WAAWtB,EAAKuB,SAAAA,GACpBpB,UAAAA,EAAAA,CACH;AAAA,IAAA,EAAA,CACF;AAAA,EAAA,GACF;AAEJ,CAAC;"}

package/dist/visualization.es84.js

@@ -1,29 +1,68 @@
-var w = Math.sqrt(50), t = Math.sqrt(10), o = Math.sqrt(2);
-function c(r, h, f) {
-  var n, e = -1, i, u, M;
-  if (h = +h, r = +r, f = +f, r === h && f > 0) return [r];
-  if ((n = h < r) && (i = r, r = h, h = i), (M = v(r, h, f)) === 0 || !isFinite(M)) return [];
-  if (M > 0) {
-    let a = Math.round(r / M), l = Math.round(h / M);
-    for (a * M < r && ++a, l * M > h && --l, u = new Array(i = l - a + 1); ++e < i; ) u[e] = (a + e) * M;
-  } else {
-    M = -M;
-    let a = Math.round(r * M), l = Math.round(h * M);
-    for (a / M < r && ++a, l / M > h && --l, u = new Array(i = l - a + 1); ++e < i; ) u[e] = (a + e) / M;
-  }
-  return n && u.reverse(), u;
-}
-function v(r, h, f) {
-  var n = (h - r) / Math.max(0, f), e = Math.floor(Math.log(n) / Math.LN10), i = n / Math.pow(10, e);
-  return e >= 0 ? (i >= w ? 10 : i >= t ? 5 : i >= o ? 2 : 1) * Math.pow(10, e) : -Math.pow(10, -e) / (i >= w ? 10 : i >= t ? 5 : i >= o ? 2 : 1);
-}
-function d(r, h, f) {
-  var n = Math.abs(h - r) / Math.max(0, f), e = Math.pow(10, Math.floor(Math.log(n) / Math.LN10)), i = n / e;
-  return i >= w ? e *= 10 : i >= t ? e *= 5 : i >= o && (e *= 2), h < r ? -e : e;
+import { jsx as b, jsxs as p, Fragment as W } from "react/jsx-runtime";
+import { c as S } from "react/compiler-runtime";
+import { TreeLink as g } from "./visualization.es129.js";
+import { memo as E } from "react";
+import { LeafLinkExtension as M } from "./visualization.es130.js";
+import { LeafNodeLabel as v } from "./visualization.es131.js";
+const F = E((x) => {
+  const e = S(39), {
+    node: o,
+    dimmed: m,
+    useBranchLengths: n,
+    leafFontFamily: d,
+    leafFontSize: c,
+    onNodeMouseMove: k,
+    onNodeMouseLeave: h,
+    onBranchClick: L
+  } = x;
+  let a;
+  e[0] !== o || e[1] !== k ? (a = (N) => k(N, o), e[0] = o, e[1] = k, e[2] = a) : a = e[2];
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+  e[3] !== o || e[4] !== h ? (t = (N) => h(N, o), e[3] = o, e[4] = h, e[5] = t) : t = e[5];
+  let i;
+  e[6] !== o || e[7] !== L ? (i = () => L(o.leaves().map(P)), e[6] = o, e[7] = L, e[8] = i) : i = e[8];
+  const s = m ? 0.2 : 1;
+  let f;
+  e[9] === /* @__PURE__ */ Symbol.for("react.memo_cache_sentinel") ? (f = {
+    transition: "opacity 0.2s ease-in"
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+  let r;
+  e[10] !== o.baseLinkPath || e[11] !== o.color || e[12] !== o.linkStrokeWidth || e[13] !== o.scaledLinkPath || e[14] !== n ? (r = /* @__PURE__ */ b(g, { scaledLinkPath: o.scaledLinkPath, baseLinkPath: o.baseLinkPath, color: o.color, strokeWidth: o.linkStrokeWidth, useBranchLengths: n }), e[10] = o.baseLinkPath, e[11] = o.color, e[12] = o.linkStrokeWidth, e[13] = o.scaledLinkPath, e[14] = n, e[15] = r) : r = e[15];
+  let l;
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+}), T = E(function(e) {
+  const o = S(11), {
+    node: m,
+    hovered: n,
+    useBranchLengths: d,
+    onNodeMouseMove: c,
+    onNodeMouseLeave: k,
+    onBranchClick: h,
+    leafFontSize: L,
+    leafFontFamily: a
+  } = e;
+  let t;
+  o[0] !== n || o[1] !== a || o[2] !== L || o[3] !== m || o[4] !== h || o[5] !== k || o[6] !== c || o[7] !== d ? (t = m.descendants()?.map((s, f) => {
+    if (!s.parent)
+      return;
+    const r = !!n.length && !n.some((l) => s.descendantIds?.has(l) || s.ancestorIds?.has(l));
+    return /* @__PURE__ */ b(F, { node: s, dimmed: r, useBranchLengths: d, leafFontSize: L, leafFontFamily: a, onBranchClick: h, onNodeMouseMove: c, onNodeMouseLeave: k }, f);
+  }), o[0] = n, o[1] = a, o[2] = L, o[3] = m, o[4] = h, o[5] = k, o[6] = c, o[7] = d, o[8] = t) : t = o[8];
+  let i;
+  return o[9] !== t ? (i = /* @__PURE__ */ b("g", { id: "tree-root", children: t }), o[9] = t, o[10] = i) : i = o[10], i;
+});
+function P(x) {
+  return x.data.id;
 }
 export {
-  c as default,
-  v as tickIncrement,
-  d as tickStep
+  T as RenderTree
 };
 //# sourceMappingURL=visualization.es84.js.map

package/dist/visualization.es84.js.map

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+{"version":3,"file":"visualization.es84.js","sources":["../src/components/PhyloTree/RenderTree.tsx"],"sourcesContent":["import { PhyloTreeProps, TreeNode } from \"./types\";\nimport { TreeLink } from \"./TreeLink\";\nimport { memo } from \"react\";\nimport { LeafLinkExtension } from \"./LeafLinkExtension\";\nimport { LeafNodeLabel } from \"./LeafNodeLabel\";\n\ntype Shared = {\n  node: TreeNode;\n  useBranchLengths: boolean;\n  leafFontSize: PhyloTreeProps[\"leafFontSize\"];\n  leafFontFamily: PhyloTreeProps[\"leafFontFamily\"];\n  onNodeMouseMove: (event: React.MouseEvent, node: TreeNode) => void;\n  onNodeMouseLeave: (event: React.MouseEvent, node: TreeNode) => void;\n  onBranchClick: (leafIds: string[]) => void;\n};\n\nexport type RenderTreeProps = Shared & {\n  hovered: string[];\n};\n\nexport type RenderChildProps = Shared & {\n  dimmed: boolean;\n};\n\nconst ChildNode = memo(\n  ({ node, dimmed, useBranchLengths, leafFontFamily, leafFontSize, onNodeMouseMove, onNodeMouseLeave, 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package/dist/visualization.es85.js

@@ -1,16 +1,65 @@
-import f from "./visualization.es206.js";
-import u from "./visualization.es220.js";
-function d() {
-  let {
-    x: r,
-    y: n,
-    defined: t,
-    curve: i
-  } = arguments.length > 0 && arguments[0] !== void 0 ? arguments[0] : {};
-  const e = u();
-  return r && f(e.x, r), n && f(e.y, n), t && e.defined(t), i && e.curve(i), e;
+import m from "./visualization.es232.js";
+import c from "./visualization.es233.js";
+import s from "./visualization.es234.js";
+import u from "./visualization.es235.js";
+import l from "./visualization.es236.js";
+import _ from "./visualization.es237.js";
+import y from "./visualization.es238.js";
+import v from "./visualization.es239.js";
+import g from "./visualization.es240.js";
+import A from "./visualization.es241.js";
+import w from "./visualization.es242.js";
+import B from "./visualization.es243.js";
+import b from "./visualization.es244.js";
+function d(e, o) {
+  e instanceof Map ? (e = [void 0, e], o === void 0 && (o = j)) : o === void 0 && (o = C);
+  for (var f = new i(e), r, h = [f], a, t, n, p; r = h.pop(); )
+    if ((t = o(r.data)) && (p = (t = Array.from(t)).length))
+      for (r.children = t, n = p - 1; n >= 0; --n)
+        h.push(a = t[n] = new i(t[n])), a.parent = r, a.depth = r.depth + 1;
+  return f.eachBefore(D);
 }
+function k() {
+  return d(this).eachBefore(x);
+}
+function C(e) {
+  return e.children;
+}
+function j(e) {
+  return Array.isArray(e) ? e[1] : null;
+}
+function x(e) {
+  e.data.value !== void 0 && (e.value = e.data.value), e.data = e.data.data;
+}
+function D(e) {
+  var o = 0;
+  do
+    e.height = o;
+  while ((e = e.parent) && e.height < ++o);
+}
+function i(e) {
+  this.data = e, this.depth = this.height = 0, this.parent = null;
+}
+i.prototype = d.prototype = {
+  constructor: i,
+  count: m,
+  each: c,
+  eachAfter: u,
+  eachBefore: s,
+  find: l,
+  sum: _,
+  sort: y,
+  path: v,
+  ancestors: g,
+  descendants: A,
+  leaves: w,
+  links: B,
+  copy: k,
+  [Symbol.iterator]: b
+};
 export {
-  d as line
+  i as Node,
+  D as computeHeight,
+  d as default
 };
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package/dist/visualization.es85.js.map

@@ -1 +1 @@
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package/dist/visualization.es86.js

@@ -1,61 +1,7 @@
-function s(i, t, n) {
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-    (2 * i._y0 + i._y1) / 3,
-    (i._x0 + 2 * i._x1) / 3,
-    (i._y0 + 2 * i._y1) / 3,
-    (i._x0 + 4 * i._x1 + t) / 6,
-    (i._y0 + 4 * i._y1 + n) / 6
-  );
-}
-function _(i) {
-  this._context = i;
-}
-_.prototype = {
-  areaStart: function() {
-    this._line = 0;
-  },
-  areaEnd: function() {
-    this._line = NaN;
-  },
-  lineStart: function() {
-    this._x0 = this._x1 = this._y0 = this._y1 = NaN, this._point = 0;
-  },
-  lineEnd: function() {
-    switch (this._point) {
-      case 3:
-        s(this, this._x1, this._y1);
-      // falls through
-      case 2:
-        this._context.lineTo(this._x1, this._y1);
-        break;
-    }
-    (this._line || this._line !== 0 && this._point === 1) && this._context.closePath(), this._line = 1 - this._line;
-  },
-  point: function(i, t) {
-    switch (i = +i, t = +t, this._point) {
-      case 0:
-        this._point = 1, this._line ? this._context.lineTo(i, t) : this._context.moveTo(i, t);
-        break;
-      case 1:
-        this._point = 2;
-        break;
-      case 2:
-        this._point = 3, this._context.lineTo((5 * this._x0 + this._x1) / 6, (5 * this._y0 + this._y1) / 6);
-      // falls through
-      default:
-        s(this, i, t);
-        break;
-    }
-    this._x0 = this._x1, this._x1 = i, this._y0 = this._y1, this._y1 = t;
-  }
-};
-function e(i) {
-  return new _(i);
+function u(n, l) {
+  return n == null || l == null ? NaN : n < l ? -1 : n > l ? 1 : n >= l ? 0 : NaN;
 }
 export {
-  _ as Basis,
-  e as default,
-  s as point
+  u as default
 };
 //# sourceMappingURL=visualization.es86.js.map

package/dist/visualization.es86.js.map

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+{"version":3,"file":"visualization.es86.js","sources":["../../../node_modules/.pnpm/d3-array@3.2.1/node_modules/d3-array/src/ascending.js"],"sourcesContent":["export default function ascending(a, b) {\n  return a == null || b == null ? NaN : a < b ? -1 : a > b ? 1 : a >= b ? 0 : NaN;\n}\n"],"names":["ascending","a","b"],"mappings":"AAAe,SAASA,EAAUC,GAAGC,GAAG;AACtC,SAAOD,KAAK,QAAQC,KAAK,OAAO,MAAMD,IAAIC,IAAI,KAAKD,IAAIC,IAAI,IAAID,KAAKC,IAAI,IAAI;AAC9E;","x_google_ignoreList":[0]}

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-const e = 12, n = "sans-serif", i = 14, l = (o) => (t) => o[Math.floor(+t)] ?? "", T = (o) => o === "horizontal" ? 0 : o === "vertical" ? -90 : o === "leftDiagonal" ? -45 : 45, c = (o) => o === "horizontal" ? "middle" : o === "rightDiagonal" ? "start" : "end", I = (o) => ({
-  fontSize: 12,
-  fontFamily: n,
-  textAnchor: c(o),
-  angle: T(o),
-  dy: o === "horizontal" ? "0.71em" : "0.25em"
-}), _ = {
-  fontSize: 14,
-  fontFamily: n,
-  textAnchor: "middle",
-  dy: "-0.5em"
-}, r = {
-  fontSize: 12,
-  fontFamily: n,
-  textAnchor: "end",
-  dx: "-0.25em",
-  dy: "0.25em"
-}, a = {
-  fontSize: 14,
-  fontFamily: n,
-  textAnchor: "middle"
-}, F = (o, t) => t.size === 0 ? o : (s) => ({
-  ...o,
-  fontWeight: t.has(Math.floor(+s)) ? 700 : 400
-});
+function g(e, n) {
+  return e.parent === n.parent ? 1 : 2;
+}
+function m(e) {
+  return e.reduce(p, 0) / e.length;
+}
+function p(e, n) {
+  return e + n.x;
+}
+function v(e) {
+  return 1 + e.reduce(z, 0);
+}
+function z(e, n) {
+  return Math.max(e, n.y);
+}
+function R(e) {
+  for (var n; n = e.children; ) e = n[0];
+  return e;
+}
+function S(e) {
+  for (var n; n = e.children; ) e = n[n.length - 1];
+  return e;
+}
+function w() {
+  var e = g, n = 1, a = 1, i = !1;
+  function u(t) {
+    var c, s = 0;
+    t.eachAfter(function(r) {
+      var h = r.children;
+      h ? (r.x = m(h), r.y = v(h)) : (r.x = c ? s += e(r, c) : 0, r.y = 0, c = r);
+    });
+    var f = R(t), l = S(t), x = f.x - e(f, l) / 2, y = l.x + e(l, f) / 2;
+    return t.eachAfter(i ? function(r) {
+      r.x = (r.x - t.x) * n, r.y = (t.y - r.y) * a;
+    } : function(r) {
+      r.x = (r.x - x) / (y - x) * n, r.y = (1 - (t.y ? r.y / t.y : 1)) * a;
+    });
+  }
+  return u.separation = function(t) {
+    return arguments.length ? (e = t, u) : e;
+  }, u.size = function(t) {
+    return arguments.length ? (i = !1, n = +t[0], a = +t[1], u) : i ? null : [n, a];
+  }, u.nodeSize = function(t) {
+    return arguments.length ? (i = !0, n = +t[0], a = +t[1], u) : i ? [n, a] : null;
+  }, u;
+}
 export {
-  i as AXIS_TITLE_FONT_SIZE,
-  n as TICK_FONT_FAMILY,
-  e as TICK_FONT_SIZE,
-  I as getXAxisTickLabelProps,
-  l as makeTickFormat,
-  F as markTickLabels,
-  _ as xAxisLabelProps,
-  T as xTickAngleFor,
-  c as xTickTextAnchorFor,
-  a as yAxisLabelProps,
-  r as yAxisTickLabelProps
+  w as default
 };
 //# sourceMappingURL=visualization.es87.js.map