@weng-lab/visualization 2.4.2 → 2.4.3

package/dist/visualization.es105.js.map

@@ -1 +1 @@
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}}\n            />\n          </Tooltip>\n        </Typography>\n\n        <div\n          style={{\n            display: 'flex',\n            flexDirection: 'column',\n            alignItems: 'left',\n            marginTop: '10px',\n          }}\n        >\n          <div style={scaleItemStyle}>\n            <div\n              style={{\n                width: width(min),\n                height: '10px',\n                backgroundColor: 'black',\n                display: 'inline-block',\n              }}\n            ></div>\n            <Typography\n              variant=\"body2\"\n              style={{\n                marginLeft: '10px',\n                fontSize: '14px',\n                fontFamily: 'Arial',\n              }}\n            >\n              {min.toFixed(2)}\n            </Typography>\n          </div>\n          <div style={scaleItemStyle}>\n            <div\n              style={{\n                width: width(mid1),\n                height: '10px',\n             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package/dist/visualization.es106.js

@@ -1,48 +1,16 @@
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-import { measureTextWidth as W } from "./visualization.es33.js";
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-    });
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 export {
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 };
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package/dist/visualization.es106.js.map

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package/dist/visualization.es107.js

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-import r from "./visualization.es35.js";
-const i = "#d1d5db", c = 0.5, u = "none", L = (n) => `${n.row}-${n.column}`;
-function m(n, e) {
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-  });
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-  const l = n == null;
-  return {
-    fill: l ? u : a ? t : e ?? t,
-    fillOpacity: l ? 0 : a ? c : 1
-  };
-}
+import { jsx as A, jsxs as F } from "react/jsx-runtime";
+import { c as H } from "react/compiler-runtime";
+import B from "./visualization.es148.js";
+import I from "./visualization.es31.js";
+const R = (E) => {
+  const e = H(75), {
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+    left: G,
+    top: L,
+    median: l,
+    firstQuartile: n,
+    thirdQuartile: c,
+    valueScale: t,
+    medianWidth: s,
+    tooltipData: w,
+    handleMouseMove: a,
+    handleCrossClick: d,
+    disableViolinPlot: i,
+    tooltip: r,
+    horizontal: o
+  } = E;
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+    y
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+};
 export {
-  i as DEFAULT_DESELECTED_COLOR,
-  c as DESELECTED_OPACITY,
-  u as NULL_VALUE_COLOR,
-  L as cellKey,
-  m as getHeatmapColorScale,
-  p as resolveCellAppearance
+  R as default
 };
 //# sourceMappingURL=visualization.es107.js.map

package/dist/visualization.es107.js.map

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+{"version":3,"file":"visualization.es107.js","sources":["../src/components/ViolinPlot/crossPlot.tsx"],"sourcesContent":["import { CrossPlotProps } from \"./types\";\nimport { Group } from \"@visx/group\";\nimport { Line } from '@visx/shape';\n\n\nconst CrossPlot = <T,>({ crossProps, left, top, median, firstQuartile, thirdQuartile, valueScale, medianWidth, tooltipData, handleMouseMove, handleCrossClick, disableViolinPlot, tooltip, horizontal }: CrossPlotProps<T>) => {\n\n    return (\n        <Group left={left} top={top}>\n            {/* Vertical line from min to max */}\n            <Line\n                from={{ x: horizontal ? valueScale(thirdQuartile) : 0, y: horizontal ? 0 : valueScale(thirdQuartile) }}\n                to={{ x: horizontal ? valueScale(firstQuartile): 0, y: horizontal ? 0: valueScale(firstQuartile) }}\n                stroke={crossProps?.color ?? \"#000000\"}\n                strokeWidth={\n                    tooltipData === tooltip && disableViolinPlot\n                        ? 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package/dist/visualization.es108.js

@@ -1,127 +1,36 @@
-import { cellKey as D, resolveCellAppearance as H } from "./visualization.es107.js";
-const w = (t, o, n) => Math.min(Math.max(t, o), n);
-function x(t, o, n) {
-  const {
-    xScale: a,
-    cellYScale: r,
-    gap: i,
-    isRect: l,
-    binWidth: c,
-    binHeight: u
-  } = t;
-  if (l)
-    return {
-      isRect: !0,
-      x: a(o),
-      y: r(n) + i,
-      width: c - i,
-      height: u - i
-    };
-  const e = Math.min(c, u) / 2;
-  return {
-    isRect: !1,
-    cx: o * c + c / 2,
-    cy: r(n) + i + e,
-    r: e - i,
-    radius: e
-  };
-}
-function W(t, o, n, a, r, i) {
-  const {
-    data: l,
-    numRows: c,
-    binWidth: u,
-    binHeight: e,
-    yMax: s
-  } = t;
-  return {
-    colStart: w(Math.floor(o / u) - i, 0, Math.max(0, l.length - 1)),
-    colEnd: w(Math.ceil((o + a) / u) + i, 0, Math.max(0, l.length - 1)),
-    rowStart: w(Math.floor((s - (n + r)) / e) - i, 0, Math.max(0, c - 1)),
-    rowEnd: w(Math.floor((s - n) / e) + i, 0, Math.max(0, c - 1))
-  };
-}
-function C(t, o, n, a) {
-  const {
+import { jsx as s, jsxs as f } from "react/jsx-runtime";
+import { c as d } from "react/compiler-runtime";
+import u from "./visualization.es66.js";
+const $ = (i) => {
+  const t = d(7), {
+    left: e,
+    top: o,
     data: r,
-    colorScale: i,
-    selectedKeys: l,
-    deselectedColor: c
-  } = o;
-  let u = null, e = -1;
-  for (let s = n.colStart; s <= n.colEnd; s++) {
-    const y = r[s];
-    if (y)
-      for (let f = n.rowStart; f <= n.rowEnd; f++) {
-        const M = y.rows[f];
-        if (!M) continue;
-        const g = M.count, R = g == null ? void 0 : i(g), A = !!l && !l.has(D({
-          row: f,
-          column: s
-        })), {
-          fill: d,
-          fillOpacity: m
-        } = H(g, R, A, c);
-        if (m <= 0) continue;
-        const h = x(o, s, f);
-        m !== e && (t.globalAlpha = m, e = m), d !== u && (t.fillStyle = d, u = d);
-        const b = a !== null && a.row === f && a.column === s;
-        if (h.isRect) {
-          const p = Math.max(h.width, 0), S = Math.max(h.height, 0);
-          t.fillRect(h.x, h.y, p, S), b && (t.beginPath(), t.rect(h.x, h.y, p, S));
-        } else
-          t.beginPath(), t.arc(h.cx, h.cy, Math.max(h.r, 0), 0, Math.PI * 2), t.fill();
-        b && (t.globalAlpha = 1, e = 1, t.lineWidth = 2, t.strokeStyle = d, t.stroke());
-      }
-  }
-  t.globalAlpha = 1;
-}
-function P(t, o, n) {
-  const {
-    data: a,
-    numRows: r,
-    binWidth: i,
-    binHeight: l,
-    yMax: c
-  } = t;
-  if (o < 0 || n < 0) return null;
-  const u = Math.floor(o / i), e = Math.floor((c - n) / l);
-  return u < 0 || u >= a.length || e < 0 || e >= r || !a[u]?.rows[e] ? null : {
-    row: e,
-    column: u
-  };
+    open: a,
+    pointTooltipBody: l
+  } = i;
+  if (!a || !r)
+    return null;
+  const c = e + 10;
+  let n;
+  t[0] !== r || t[1] !== l ? (n = l && r.point ? l(r.point) : Object.entries(r).map(g), t[0] = r, t[1] = l, t[2] = n) : n = t[2];
+  let p;
+  return t[3] !== c || t[4] !== n || t[5] !== o ? (p = /* @__PURE__ */ s(u, { left: c, top: o, children: n }), t[3] = c, t[4] = n, t[5] = o, t[6] = p) : p = t[6], p;
+};
+function m(i) {
+  return i.toUpperCase();
 }
-function k(t, o) {
-  const n = t.data[o.column], a = n?.rows[o.row];
-  if (!n || !a) return null;
-  const r = a.count, i = r == null ? void 0 : t.colorScale(r), l = x(t, o.column, o.row), c = {
-    bin: a,
-    row: o.row,
-    column: o.column,
-    datum: n,
-    gap: t.gap,
-    count: r,
-    color: i,
-    opacity: r == null ? void 0 : 1
-  };
-  return l.isRect ? {
-    ...c,
-    x: l.x,
-    y: l.y,
-    width: l.width,
-    height: l.height
-  } : {
-    ...c,
-    cx: l.cx,
-    cy: l.cy,
-    r: l.r,
-    radius: l.radius
-  };
+function g(i) {
+  const [t, e] = i, o = t.replace(/([a-z])([A-Z])/g, "$1 $2").replace(/^./, m);
+  return t === "outlier" ? /* @__PURE__ */ s("div", { children: /* @__PURE__ */ s("strong", { children: o }) }, t) : /* @__PURE__ */ f("div", { children: [
+    /* @__PURE__ */ f("strong", { children: [
+      o,
+      ": "
+    ] }),
+    typeof e == "string" ? e.length > 45 ? `${e.replace(/_/g, " ").slice(0, 45)}...` : e.replace(/_/g, " ") : String(e)
+  ] }, t);
 }
 export {
-  k as buildBin,
-  C as drawHeatmapCells,
-  W as getVisibleRange,
-  P as hitTestCell
+  $ as default
 };
 //# sourceMappingURL=visualization.es108.js.map

package/dist/visualization.es108.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es108.js","sources":["../src/components/Heatmap/HeatmapCanvasCells.ts"],"sourcesContent":["import type { ColumnDatum, HeatmapCellId } from \"./types\";\nimport type { AnyBin } from \"./HeatmapCells\";\nimport { cellKey, resolveCellAppearance } from \"./heatmapCellAppearance\";\n\n/**\n * Everything the canvas draw loop and hit-testing need to place a cell exactly where the SVG\n * path (HeatmapCells.tsx, via @visx/heatmap's HeatmapRect/HeatmapCircle) would. xScale/cellYScale\n * are the same functions Heatmap.tsx already builds and passes to HeatmapCells.\n */\nexport interface CanvasCellParams {\n  data: ColumnDatum[];\n  numRows: number;\n  xScale: (column: number) => number;\n  cellYScale: (row: number) => number;\n  colorScale: (count: number) => string | undefined;\n  gap: number;\n  isRect: boolean;\n  binWidth: number;\n  binHeight: number;\n  yMax: number;\n  selectedKeys: Set<string> | null;\n  deselectedColor: string;\n}\n\nexport interface CanvasDrawRange {\n  colStart: number;\n  colEnd: number;\n  rowStart: number;\n  rowEnd: number;\n}\n\nconst clamp = (value: number, min: number, max: number) => Math.min(Math.max(value, min), max);\n\n// Mirrors @visx/heatmap's HeatmapRect/HeatmapCircle bin geometry exactly (see their source:\n// node_modules/@visx/heatmap/lib/heatmaps/{HeatmapRect,HeatmapCircle}.js) so canvas-drawn cells\n// land on the same pixels the SVG path (export, non-scrollable mode) would draw them at. The\n// circle center's x mirrors HeatmapCell.tsx's own recomputation (col*binWidth + binWidth/2)\n// rather than @visx/heatmap's raw cx, for the same reason that file does it: keeps circles\n// centered in their cell regardless of the configured radius.\ntype CellGeometry =\n  | { isRect: true; x: number; y: number; width: number; height: number }\n  | { isRect: false; cx: number; cy: number; r: number; radius: number };\n\nfunction getCellGeometry(params: CanvasCellParams, col: number, row: number): CellGeometry {\n  const { xScale, cellYScale, gap, isRect, binWidth, binHeight } = params;\n  if (isRect) {\n    return { isRect: true, x: xScale(col), y: cellYScale(row) + gap, width: binWidth - gap, height: binHeight - gap };\n  }\n  const radius = Math.min(binWidth, binHeight) / 2;\n  return { isRect: false, cx: col * binWidth + binWidth / 2, cy: cellYScale(row) + gap + radius, r: radius - gap, radius };\n}\n\n/**\n * Column/row index bounds (inclusive) that intersect the given scroll viewport, plus a small\n * overscan so a cell is already drawn just before it scrolls into view rather than popping in a\n * frame late. Row bounds are derived from cellYScale's own convention (row 0 at the bottom of\n * the grid, row numRows-1 at the top): a cell at row r occupies content-y band\n * [yMax-(r+1)*binHeight, yMax-r*binHeight), so the row under a given y is\n * floor((yMax-y)/binHeight).\n */\nexport function getVisibleRange(\n  params: CanvasCellParams,\n  scrollLeft: number,\n  scrollTop: number,\n  viewportWidth: number,\n  viewportHeight: number,\n  overscan: number\n): CanvasDrawRange {\n  const { data, numRows, binWidth, binHeight, yMax } = params;\n  return {\n    colStart: clamp(Math.floor(scrollLeft / binWidth) - overscan, 0, Math.max(0, data.length - 1)),\n    colEnd: clamp(Math.ceil((scrollLeft + viewportWidth) / binWidth) + overscan, 0, Math.max(0, data.length - 1)),\n    rowStart: clamp(Math.floor((yMax - (scrollTop + viewportHeight)) / binHeight) - overscan, 0, Math.max(0, numRows - 1)),\n    rowEnd: clamp(Math.floor((yMax - scrollTop) / binHeight) + overscan, 0, Math.max(0, numRows - 1)),\n  };\n}\n\n/** Paints the cells in `range` onto `ctx`, whose origin is already at content-space (0,0). */\nexport function drawHeatmapCells(\n  ctx: CanvasRenderingContext2D,\n  params: CanvasCellParams,\n  range: CanvasDrawRange,\n  hoveredCell: HeatmapCellId | null\n) {\n  const { data, colorScale, selectedKeys, deselectedColor } = params;\n  // fillStyle/globalAlpha assignment forces the browser to re-parse the CSS color string even\n  // when it's unchanged from the previous cell - skipping redundant writes matters at this scale\n  // (this loop runs per-cell, up to hundreds of thousands of times for the minimap's full-dataset\n  // draw). Rects also use fillRect directly (no beginPath/rect/fill trio) since it's a faster\n  // native path for solid fills; a path is only built for a cell when it's the hovered one, so\n  // its outline can still be stroked.\n  let lastFill: string | null = null;\n  let lastAlpha = -1;\n  for (let col = range.colStart; col <= range.colEnd; col++) {\n    const columnDatum = data[col];\n    if (!columnDatum) continue;\n    for (let row = range.rowStart; row <= range.rowEnd; row++) {\n      const rowDatum = columnDatum.rows[row];\n      if (!rowDatum) continue;\n      const count = rowDatum.count;\n      const color = count == null ? undefined : colorScale(count);\n      const isDeselected = !!selectedKeys && !selectedKeys.has(cellKey({ row, column: col }));\n      const { fill, fillOpacity } = resolveCellAppearance(count, color, isDeselected, deselectedColor);\n      if (fillOpacity <= 0) continue;\n\n      const geometry = getCellGeometry(params, col, row);\n      if (fillOpacity !== lastAlpha) {\n        ctx.globalAlpha = fillOpacity;\n        lastAlpha = fillOpacity;\n      }\n      if (fill !== lastFill) {\n        ctx.fillStyle = fill;\n        lastFill = fill;\n      }\n\n      const isHovered = hoveredCell !== null && hoveredCell.row === row && hoveredCell.column === col;\n      if (geometry.isRect) {\n        const width = Math.max(geometry.width, 0);\n        const height = Math.max(geometry.height, 0);\n        ctx.fillRect(geometry.x, geometry.y, width, height);\n        if (isHovered) {\n          ctx.beginPath();\n          ctx.rect(geometry.x, geometry.y, width, height);\n        }\n      } else {\n        ctx.beginPath();\n        ctx.arc(geometry.cx, geometry.cy, Math.max(geometry.r, 0), 0, Math.PI * 2);\n        ctx.fill();\n      }\n\n      if (isHovered) {\n        ctx.globalAlpha = 1;\n        lastAlpha = 1;\n        ctx.lineWidth = 2;\n        ctx.strokeStyle = fill;\n        ctx.stroke();\n      }\n    }\n  }\n  ctx.globalAlpha = 1;\n}\n\n/** Content-space (post-scroll-offset) coordinates -> the cell under them, or null if none. */\nexport function hitTestCell(params: CanvasCellParams, contentX: number, contentY: number): HeatmapCellId | null {\n  const { data, numRows, binWidth, binHeight, yMax } = params;\n  if (contentX < 0 || contentY < 0) return null;\n  const column = Math.floor(contentX / binWidth);\n  const row = Math.floor((yMax - contentY) / binHeight);\n  if (column < 0 || column >= data.length || row < 0 || row >= numRows) return null;\n  if (!data[column]?.rows[row]) return null;\n  return { row, column };\n}\n\n/** Builds the same bin shape @visx/heatmap's RectCell/CircleCell provide, for onClick/tooltipBody. */\nexport function buildBin(params: CanvasCellParams, cell: HeatmapCellId): AnyBin | null {\n  const columnDatum = params.data[cell.column];\n  const rowDatum = columnDatum?.rows[cell.row];\n  if (!columnDatum || !rowDatum) return null;\n\n  const count = rowDatum.count;\n  const color = count == null ? undefined : params.colorScale(count);\n  const geometry = getCellGeometry(params, cell.column, cell.row);\n  const shared = { bin: rowDatum, row: cell.row, column: cell.column, datum: columnDatum, gap: params.gap, count, color, opacity: count == null ? undefined : 1 };\n\n  return geometry.isRect\n    ? 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package/dist/visualization.es109.js

@@ -1,83 +1,16 @@
-import { jsxs as U, jsx as X } from "react/jsx-runtime";
-import { useRef as Y, useEffect as k, useCallback as l } from "react";
-import { drawHeatmapCells as q } from "./visualization.es108.js";
-const m = (c, o, e) => Math.min(Math.max(c, o), e), J = ({
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-  xMax: o,
-  yMax: e,
-  viewportWidth: a,
-  viewportHeight: s,
-  scrollLeft: b,
-  scrollTop: P,
-  width: i,
-  height: d,
-  onNavigate: f,
-  onCanvasClick: R,
-  onReady: g
-}) => {
-  const D = Y(null), n = o > 0 ? i / o : 0, r = e > 0 ? d / e : 0, S = Y(g);
-  S.current = g, k(() => {
-    const t = D.current;
-    if (!t || n <= 0 || r <= 0) return;
-    const u = requestAnimationFrame(() => {
-      const p = t.getContext("2d");
-      if (!p) return;
-      const I = window.devicePixelRatio || 1;
-      p.setTransform(I * n, 0, 0, I * r, 0, 0), p.clearRect(0, 0, o, e);
-      const M = {
-        colStart: 0,
-        colEnd: Math.max(0, c.data.length - 1),
-        rowStart: 0,
-        rowEnd: Math.max(0, c.numRows - 1)
-      };
-      q(p, c, M, null), S.current?.();
-    });
-    return () => cancelAnimationFrame(u);
-  }, [c, o, e, n, r]);
-  const T = l((t, u) => {
-    f(m(t - a / 2, 0, Math.max(0, o - a)), m(u - s / 2, 0, Math.max(0, e - s)));
-  }, [f, a, s, o, e]), h = l((t) => {
-    if (R) {
-      R();
-      return;
-    }
-    if (n <= 0 || r <= 0) return;
-    const u = t.currentTarget.getBoundingClientRect();
-    T((t.clientX - u.left) / n, (t.clientY - u.top) / r);
-  }, [R, T, n, r]), j = l((t) => {
-    t.stopPropagation(), t.currentTarget.setPointerCapture(t.pointerId);
-  }, []), x = l((t) => {
-    n <= 0 || r <= 0 || !t.currentTarget.hasPointerCapture(t.pointerId) || f(m(b + t.movementX / n, 0, Math.max(0, o - a)), m(P + t.movementY / r, 0, Math.max(0, e - s)));
-  }, [b, P, n, r, o, e, a, s, f]), z = l((t) => {
-    t.currentTarget.releasePointerCapture(t.pointerId);
-  }, []), C = m(b * n, 0, i), E = m(P * r, 0, d), A = Math.max(0, Math.min(a * n, i - C)), F = Math.max(0, Math.min(s * r, d - E));
-  return /* @__PURE__ */ U("div", { style: {
-    position: "relative",
-    width: i,
-    height: d
-  }, children: [
-    /* @__PURE__ */ X("canvas", { ref: D, width: i * (window.devicePixelRatio || 1), height: d * (window.devicePixelRatio || 1), style: {
-      width: i,
-      height: d,
-      display: "block",
-      cursor: "pointer",
-      border: "1px solid #d5d5d5",
-      boxSizing: "border-box"
-    }, onPointerDown: h }),
-    /* @__PURE__ */ X("div", { onPointerDown: j, onPointerMove: x, onPointerUp: z, style: {
-      position: "absolute",
-      left: C,
-      top: E,
-      width: A,
-      height: F,
-      border: "2px solid #0d0f98",
-      backgroundColor: "rgba(13, 15, 152, 0.15)",
-      cursor: "grab",
-      boxSizing: "border-box"
-    } })
-  ] });
-};
+function l(d, i) {
+  let e;
+  if (i === void 0)
+    for (const n of d)
+      n != null && (e < n || e === void 0 && n >= n) && (e = n);
+  else {
+    let n = -1;
+    for (let f of d)
+      (f = i(f, ++n, d)) != null && (e < f || e === void 0 && f >= f) && (e = f);
+  }
+  return e;
+}
 export {
-  J as default
+  l as default
 };
 //# sourceMappingURL=visualization.es109.js.map

package/dist/visualization.es109.js.map

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