@weng-lab/visualization 2.4.0-beta.3 → 2.4.0-beta.4

package/dist/visualization.es88.js.map

@@ -1 +1 @@
-{"version":3,"file":"visualization.es88.js","sources":["../../../node_modules/.pnpm/d3-shape@3.2.0/node_modules/d3-shape/src/curve/basis.js"],"sourcesContent":["export function point(that, x, y) {\n  that._context.bezierCurveTo(\n    (2 * that._x0 + that._x1) / 3,\n    (2 * that._y0 + that._y1) / 3,\n    (that._x0 + 2 * that._x1) / 3,\n    (that._y0 + 2 * that._y1) / 3,\n    (that._x0 + 4 * that._x1 + x) / 6,\n    (that._y0 + 4 * that._y1 + y) / 6\n  );\n}\n\nexport function Basis(context) {\n  this._context = context;\n}\n\nBasis.prototype = {\n  areaStart: function() {\n    this._line = 0;\n  },\n  areaEnd: function() {\n    this._line = NaN;\n  },\n  lineStart: function() {\n    this._x0 = this._x1 =\n    this._y0 = this._y1 = NaN;\n    this._point = 0;\n  },\n  lineEnd: function() {\n    switch (this._point) {\n      case 3: point(this, this._x1, this._y1); // falls through\n      case 2: this._context.lineTo(this._x1, this._y1); break;\n    }\n    if (this._line || (this._line !== 0 && this._point === 1)) this._context.closePath();\n    this._line = 1 - this._line;\n  },\n  point: function(x, y) {\n    x = +x, y = +y;\n    switch (this._point) {\n      case 0: this._point = 1; this._line ? this._context.lineTo(x, y) : this._context.moveTo(x, y); break;\n      case 1: this._point = 2; break;\n      case 2: this._point = 3; this._context.lineTo((5 * this._x0 + this._x1) / 6, (5 * this._y0 + this._y1) / 6); // falls through\n      default: point(this, x, y); break;\n    }\n    this._x0 = this._x1, this._x1 = x;\n    this._y0 = this._y1, this._y1 = y;\n  }\n};\n\nexport default function(context) {\n  return new Basis(context);\n}\n"],"names":["point","that","x","y","Basis","context","curveBasis"],"mappings":"AAAO,SAASA,EAAMC,GAAMC,GAAGC,GAAG;AAChC,EAAAF,EAAK,SAAS;AAAA,KACX,IAAIA,EAAK,MAAMA,EAAK,OAAO;AAAA,KAC3B,IAAIA,EAAK,MAAMA,EAAK,OAAO;AAAA,KAC3BA,EAAK,MAAM,IAAIA,EAAK,OAAO;AAAA,KAC3BA,EAAK,MAAM,IAAIA,EAAK,OAAO;AAAA,KAC3BA,EAAK,MAAM,IAAIA,EAAK,MAAMC,KAAK;AAAA,KAC/BD,EAAK,MAAM,IAAIA,EAAK,MAAME,KAAK;AAAA,EACpC;AACA;AAEO,SAASC,EAAMC,GAAS;AAC7B,OAAK,WAAWA;AAClB;AAEAD,EAAM,YAAY;AAAA,EAChB,WAAW,WAAW;AACpB,SAAK,QAAQ;AAAA,EACf;AAAA,EACA,SAAS,WAAW;AAClB,SAAK,QAAQ;AAAA,EACf;AAAA,EACA,WAAW,WAAW;AACpB,SAAK,MAAM,KAAK,MAChB,KAAK,MAAM,KAAK,MAAM,KACtB,KAAK,SAAS;AAAA,EAChB;AAAA,EACA,SAAS,WAAW;AAClB,YAAQ,KAAK,QAAM;AAAA,MACjB,KAAK;AAAG,QAAAJ,EAAM,MAAM,KAAK,KAAK,KAAK,GAAG;AAAA;AAAA,MACtC,KAAK;AAAG,aAAK,SAAS,OAAO,KAAK,KAAK,KAAK,GAAG;AAAG;AAAA,IACxD;AACI,KAAI,KAAK,SAAU,KAAK,UAAU,KAAK,KAAK,WAAW,MAAI,KAAK,SAAS,UAAS,GAClF,KAAK,QAAQ,IAAI,KAAK;AAAA,EACxB;AAAA,EACA,OAAO,SAASE,GAAGC,GAAG;AAEpB,YADAD,IAAI,CAACA,GAAGC,IAAI,CAACA,GACL,KAAK,QAAM;AAAA,MACjB,KAAK;AAAG,aAAK,SAAS,GAAG,KAAK,QAAQ,KAAK,SAAS,OAAOD,GAAGC,CAAC,IAAI,KAAK,SAAS,OAAOD,GAAGC,CAAC;AAAG;AAAA,MAC/F,KAAK;AAAG,aAAK,SAAS;AAAG;AAAA,MACzB,KAAK;AAAG,aAAK,SAAS,GAAG,KAAK,SAAS,QAAQ,IAAI,KAAK,MAAM,KAAK,OAAO,IAAI,IAAI,KAAK,MAAM,KAAK,OAAO,CAAC;AAAA;AAAA,MAC1G;AAAS,QAAAH,EAAM,MAAME,GAAGC,CAAC;AAAG;AAAA,IAClC;AACI,SAAK,MAAM,KAAK,KAAK,KAAK,MAAMD,GAChC,KAAK,MAAM,KAAK,KAAK,KAAK,MAAMC;AAAA,EAClC;AACF;AAEe,SAAAG,EAASD,GAAS;AAC/B,SAAO,IAAID,EAAMC,CAAO;AAC1B;","x_google_ignoreList":[0]}
+{"version":3,"file":"visualization.es88.js","sources":["../../../node_modules/.pnpm/@visx+shape@4.0.0_@types+react@19.2.14_react@19.2.4/node_modules/@visx/shape/esm/util/D3ShapeFactories.js"],"sourcesContent":["import { arc as d3Arc, area as d3Area, line as d3Line, pie as d3Pie, radialLine as d3RadialLine, stack as d3Stack } from '@visx/vendor/d3-shape';\nimport setNumberOrNumberAccessor from \"./setNumberOrNumberAccessor.js\";\nimport stackOrder from \"./stackOrder.js\";\nimport stackOffset from \"./stackOffset.js\";\nexport function arc() {\n  let {\n    innerRadius,\n    outerRadius,\n    cornerRadius,\n    startAngle,\n    endAngle,\n    padAngle,\n    padRadius\n  } = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n  const path = d3Arc();\n  if (innerRadius != null) setNumberOrNumberAccessor(path.innerRadius, innerRadius);\n  if (outerRadius != null) setNumberOrNumberAccessor(path.outerRadius, outerRadius);\n  if (cornerRadius != null) setNumberOrNumberAccessor(path.cornerRadius, cornerRadius);\n  if (startAngle != null) setNumberOrNumberAccessor(path.startAngle, startAngle);\n  if (endAngle != null) setNumberOrNumberAccessor(path.endAngle, endAngle);\n  if (padAngle != null) setNumberOrNumberAccessor(path.padAngle, padAngle);\n  if (padRadius != null) setNumberOrNumberAccessor(path.padRadius, padRadius);\n  return path;\n}\nexport function area() {\n  let {\n    x,\n    x0,\n    x1,\n    y,\n    y0,\n    y1,\n    defined,\n    curve\n  } = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n  const path = d3Area();\n  if (x) setNumberOrNumberAccessor(path.x, x);\n  if (x0) setNumberOrNumberAccessor(path.x0, x0);\n  if (x1) setNumberOrNumberAccessor(path.x1, x1);\n  if (y) setNumberOrNumberAccessor(path.y, y);\n  if (y0) setNumberOrNumberAccessor(path.y0, y0);\n  if (y1) setNumberOrNumberAccessor(path.y1, y1);\n  if (defined) path.defined(defined);\n  if (curve) path.curve(curve);\n  return path;\n}\nexport function line() {\n  let {\n    x,\n    y,\n    defined,\n    curve\n  } = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n  const path = d3Line();\n  if (x) setNumberOrNumberAccessor(path.x, x);\n  if (y) setNumberOrNumberAccessor(path.y, y);\n  if (defined) path.defined(defined);\n  if (curve) path.curve(curve);\n  return path;\n}\nexport function pie() {\n  let {\n    startAngle,\n    endAngle,\n    padAngle,\n    value,\n    sort,\n    sortValues\n  } = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n  const path = d3Pie();\n\n  // In d3-shape v3+, sortValues defaults to descending sort.\n  // To maintain visx's behavior of preserving input order by default,\n  // we explicitly set sortValues to null when neither sort nor sortValues is provided.\n  // Note: d3's pie generator clears sortValues when sort is set, and vice versa.\n  if (sortValues !== undefined) {\n    path.sortValues(sortValues);\n  } else if (sort === undefined) {\n    // Neither provided - disable sorting to preserve input order\n    path.sortValues(null);\n  } else if (sort === null) {\n    // explicit null: clear comparator\n    path.sort(null);\n  } else {\n    // here sort is narrowed to a comparator function\n    path.sort(sort);\n  }\n  if (value != null) path.value(value);\n  if (padAngle != null) setNumberOrNumberAccessor(path.padAngle, padAngle);\n  if (startAngle != null) setNumberOrNumberAccessor(path.startAngle, startAngle);\n  if (endAngle != null) setNumberOrNumberAccessor(path.endAngle, endAngle);\n  return path;\n}\nexport function radialLine() {\n  let {\n    angle,\n    radius,\n    defined,\n    curve\n  } = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : {};\n  const path = d3RadialLine();\n  if (angle) setNumberOrNumberAccessor(path.angle, angle);\n  if (radius) setNumberOrNumberAccessor(path.radius, radius);\n  if (defined) path.defined(defined);\n  if (curve) path.curve(curve);\n  return path;\n}\nexport function stack(_ref) {\n  let {\n    keys,\n    value,\n    order,\n    offset\n  } = _ref;\n  const path = d3Stack();\n  if (keys) path.keys(keys);\n  if (value) setNumberOrNumberAccessor(path.value, value);\n  if (order) path.order(stackOrder(order));\n  if (offset) path.offset(stackOffset(offset));\n  return path;\n}"],"names":["line","x","y","defined","curve","path","d3Line","setNumberOrNumberAccessor"],"mappings":";;AA8CO,SAASA,IAAO;AACrB,MAAI;AAAA,IACF,GAAAC;AAAA,IACA,GAAAC;AAAA,IACA,SAAAC;AAAA,IACA,OAAAC;AAAA,EACJ,IAAM,UAAU,SAAS,KAAK,UAAU,CAAC,MAAM,SAAY,UAAU,CAAC,IAAI,CAAA;AACxE,QAAMC,IAAOC,EAAM;AACnB,SAAIL,KAAGM,EAA0BF,EAAK,GAAGJ,CAAC,GACtCC,KAAGK,EAA0BF,EAAK,GAAGH,CAAC,GACtCC,KAASE,EAAK,QAAQF,CAAO,GAC7BC,KAAOC,EAAK,MAAMD,CAAK,GACpBC;AACT;","x_google_ignoreList":[0]}

package/dist/visualization.es89.js

@@ -1,67 +1,61 @@
-import { useState as b, useCallback as S, useRef as A, useMemo as C, useEffect as D } from "react";
-import { debounce as O } from "./visualization.es238.js";
-const k = [], g = {
-  width: 0,
-  height: 0,
-  top: 0,
-  left: 0
-};
-function B() {
-  let {
-    initialSize: w = g,
-    debounceTime: c = 300,
-    ignoreDimensions: i = k,
-    enableDebounceLeadingCall: l = !0,
-    resizeObserverPolyfill: u,
-    externalRef: n
-  } = arguments.length > 0 && arguments[0] !== void 0 ? arguments[0] : {};
-  const [a, y] = b(null), z = S((e) => {
-    y(e), typeof n == "function" ? n(e) : n != null && (n.current = e);
-  }, [n]), f = A(0), [p, v] = b({
-    ...g,
-    ...w
-  }), s = C(() => {
-    const e = Array.isArray(i) ? i : [i];
-    return O((r) => {
-      v((o) => Object.keys(o).filter((t) => o[t] !== r[t]).every((t) => e.includes(t)) ? o : r);
-    }, c, {
-      leading: l
-    });
-  }, [c, l, i]);
-  return D(() => {
-    if (!a) {
-      s.cancel();
-      return;
+function s(i, t, n) {
+  i._context.bezierCurveTo(
+    (2 * i._x0 + i._x1) / 3,
+    (2 * i._y0 + i._y1) / 3,
+    (i._x0 + 2 * i._x1) / 3,
+    (i._y0 + 2 * i._y1) / 3,
+    (i._x0 + 4 * i._x1 + t) / 6,
+    (i._y0 + 4 * i._y1 + n) / 6
+  );
+}
+function _(i) {
+  this._context = i;
+}
+_.prototype = {
+  areaStart: function() {
+    this._line = 0;
+  },
+  areaEnd: function() {
+    this._line = NaN;
+  },
+  lineStart: function() {
+    this._x0 = this._x1 = this._y0 = this._y1 = NaN, this._point = 0;
+  },
+  lineEnd: function() {
+    switch (this._point) {
+      case 3:
+        s(this, this._x1, this._y1);
+      // falls through
+      case 2:
+        this._context.lineTo(this._x1, this._y1);
+        break;
     }
-    const e = u || window.ResizeObserver, r = new e((o) => {
-      o.forEach((d) => {
-        const {
-          left: m,
-          top: h,
-          width: t,
-          height: R
-        } = d?.contentRect ?? {};
-        f.current = window.requestAnimationFrame(() => {
-          s({
-            width: t,
-            height: R,
-            top: h,
-            left: m
-          });
-        });
-      });
-    });
-    return r.observe(a), () => {
-      window.cancelAnimationFrame(f.current), r.disconnect(), s.cancel();
-    };
-  }, [a, s, u]), {
-    parentRef: z,
-    node: a,
-    resize: s,
-    ...p
-  };
+    (this._line || this._line !== 0 && this._point === 1) && this._context.closePath(), this._line = 1 - this._line;
+  },
+  point: function(i, t) {
+    switch (i = +i, t = +t, this._point) {
+      case 0:
+        this._point = 1, this._line ? this._context.lineTo(i, t) : this._context.moveTo(i, t);
+        break;
+      case 1:
+        this._point = 2;
+        break;
+      case 2:
+        this._point = 3, this._context.lineTo((5 * this._x0 + this._x1) / 6, (5 * this._y0 + this._y1) / 6);
+      // falls through
+      default:
+        s(this, i, t);
+        break;
+    }
+    this._x0 = this._x1, this._x1 = i, this._y0 = this._y1, this._y1 = t;
+  }
+};
+function e(i) {
+  return new _(i);
 }
 export {
-  B as default
+  _ as Basis,
+  e as default,
+  s as point
 };
 //# sourceMappingURL=visualization.es89.js.map

package/dist/visualization.es89.js.map

@@ -1 +1 @@
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package/dist/visualization.es9.js

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 import { jsx as p } from "react/jsx-runtime";
 import { c as u } from "react/compiler-runtime";
 import { useState as P } from "react";
-import g from "./visualization.es50.js";
+import g from "./visualization.es61.js";
 const y = (m) => {
   const t = u(11), {
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-import { jsx as m } from "react/jsx-runtime";
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-  dx: "0.25em",
-  dy: "0.25em",
-  fill: "#222",
-  fontFamily: "Arial",
-  fontSize: 10,
-  textAnchor: "start"
+import { useState as b, useCallback as S, useRef as A, useMemo as C, useEffect as D } from "react";
+import { debounce as O } from "./visualization.es238.js";
+const k = [], g = {
+  width: 0,
+  height: 0,
+  top: 0,
+  left: 0
 };
-function g(i) {
+function B() {
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-    labelOffset: r = 36,
-    tickLength: e = 8,
-    tickLabelProps: t,
-    ...s
-  } = i;
-  const a = typeof t == "function" ? t : {
-    ...c,
-    ...t
+    initialSize: w = g,
+    debounceTime: c = 300,
+    ignoreDimensions: i = k,
+    enableDebounceLeadingCall: l = !0,
+    resizeObserverPolyfill: u,
+    externalRef: n
+  } = arguments.length > 0 && arguments[0] !== void 0 ? arguments[0] : {};
+  const [a, y] = b(null), z = S((e) => {
+    y(e), typeof n == "function" ? n(e) : n != null && (n.current = e);
+  }, [n]), f = A(0), [p, v] = b({
+    ...g,
+    ...w
+  }), s = C(() => {
+    const e = Array.isArray(i) ? i : [i];
+    return O((r) => {
+      v((o) => Object.keys(o).filter((t) => o[t] !== r[t]).every((t) => e.includes(t)) ? o : r);
+    }, c, {
+      leading: l
+    });
+  }, [c, l, i]);
+  return D(() => {
+    if (!a) {
+      s.cancel();
+      return;
+    }
+    const e = u || window.ResizeObserver, r = new e((o) => {
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+          top: h,
+          width: t,
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+        } = d?.contentRect ?? {};
+        f.current = window.requestAnimationFrame(() => {
+          s({
+            width: t,
+            height: R,
+            top: h,
+            left: m
+          });
+        });
+      });
+    });
+    return r.observe(a), () => {
+      window.cancelAnimationFrame(f.current), r.disconnect(), s.cancel();
+    };
+  }, [a, s, u]), {
+    parentRef: z,
+    node: a,
+    resize: s,
+    ...p
   };
-  return /* @__PURE__ */ m(n, {
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-    orientation: f.right,
-    tickLabelProps: a,
-    tickLength: e,
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-  });
 }
 export {
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+  B as default
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package/dist/visualization.es92.js

@@ -1,7 +1,7 @@
 import { jsx as u } from "react/jsx-runtime";
 import { c as p } from "react/compiler-runtime";
 import { memo as g } from "react";
-import M from "./visualization.es46.js";
+import M from "./visualization.es41.js";
 const D = g((a) => {
   const o = p(11), {
     dragStart: r,

package/dist/visualization.es93.js

@@ -1,7 +1,7 @@
 import { jsx as e } from "react/jsx-runtime";
 import { useBranchLengthTransition as m } from "./visualization.es7.js";
 import { memo as a } from "react";
-import { motion as s } from "./visualization.es65.js";
+import { motion as s } from "./visualization.es49.js";
 const c = a(function({
   scaledLinkPath: o,
   baseLinkPath: n,

package/dist/visualization.es94.js

@@ -1,7 +1,7 @@
 import { jsx as e } from "react/jsx-runtime";
 import { useBranchLengthTransition as m } from "./visualization.es7.js";
 import { memo as s } from "react";
-import { motion as a } from "./visualization.es65.js";
+import { motion as a } from "./visualization.es49.js";
 const k = s(function({
   useBranchLengths: n,
   color: i,

package/dist/visualization.es96.js

@@ -1,5 +1,5 @@
-import { getDefaultExportFromCjs as o } from "./visualization.es188.js";
-import { __require as r } from "./visualization.es230.js";
+import { getDefaultExportFromCjs as o } from "./visualization.es237.js";
+import { __require as r } from "./visualization.es227.js";
 var t = r();
 const d = /* @__PURE__ */ o(t);
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package/dist/visualization.es97.js

@@ -1,5 +1,5 @@
-import { getDefaultExportFromCjs as o } from "./visualization.es188.js";
-import { __require as r } from "./visualization.es232.js";
+import { getDefaultExportFromCjs as o } from "./visualization.es237.js";
+import { __require as r } from "./visualization.es229.js";
 var e = r();
 const a = /* @__PURE__ */ o(e);
 export {

package/dist/visualization.es98.js

@@ -1,4 +1,4 @@
-import { cubicBezier as e } from "./visualization.es485.js";
+import { cubicBezier as e } from "./visualization.es484.js";
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 export {
   o as easeIn,

package/dist/visualization.es99.js

@@ -1,4 +1,4 @@
-import i from "./visualization.es129.js";
+import i from "./visualization.es127.js";
 import { jsx as t } from "react/jsx-runtime";
 function a(r) {
   let {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@weng-lab/visualization",
-  "version": "2.4.0-beta.3",
+  "version": "2.4.0-beta.4",
   "description": "Visualization components for the Weng/Moore Labs suite of genomics web resources",
   "type": "module",
   "module": "dist/visualization.es.js",

package/dist/visualization.es81.js

@@ -1,34 +0,0 @@
-import S from "./visualization.es79.js";
-import g from "./visualization.es77.js";
-var k = (1 + Math.sqrt(5)) / 2;
-function D(w, d, i, a, l, f) {
-  for (var p = [], t = d.children, v, u, q = 0, r = 0, M = t.length, m, c, o = d.value, e, h, s, V, R, b, n; q < M; ) {
-    m = l - i, c = f - a;
-    do
-      e = t[r++].value;
-    while (!e && r < M);
-    for (h = s = e, b = Math.max(c / m, m / c) / (o * w), n = e * e * b, R = Math.max(s / n, n / h); r < M; ++r) {
-      if (e += u = t[r].value, u < h && (h = u), u > s && (s = u), n = e * e * b, V = Math.max(s / n, n / h), V > R) {
-        e -= u;
-        break;
-      }
-      R = V;
-    }
-    p.push(v = { value: e, dice: m < c, children: t.slice(q, r) }), v.dice ? S(v, i, a, l, o ? a += c * e / o : f) : g(v, i, a, o ? i += m * e / o : l, f), o -= e, q = r;
-  }
-  return p;
-}
-const A = (function w(d) {
-  function i(a, l, f, p, t) {
-    D(d, a, l, f, p, t);
-  }
-  return i.ratio = function(a) {
-    return w((a = +a) > 1 ? a : 1);
-  }, i;
-})(k);
-export {
-  A as default,
-  k as phi,
-  D as squarifyRatio
-};
-//# sourceMappingURL=visualization.es81.js.map

package/dist/visualization.es81.js.map

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