@weng-lab/ui-components 3.1.0 → 3.1.2

package/dist/ui-components.es34.js

@@ -1,258 +1,248 @@
-import * as j from "react";
-import r from "./ui-components.es91.js";
-import { clsx as O } from "./ui-components.es96.js";
-import { internal_createExtendSxProp as S } from "./ui-components.es112.js";
-import w from "./ui-components.es99.js";
-import B from "./ui-components.es102.js";
-import { getTypographyUtilityClass as P } from "./ui-components.es113.js";
-import { j as W } from "./ui-components.es16.js";
-import { useDefaultProps as C } from "./ui-components.es94.js";
-import c from "./ui-components.es107.js";
-import R from "./ui-components.es108.js";
-import M from "./ui-components.es43.js";
-const N = {
-  primary: !0,
-  secondary: !0,
-  error: !0,
-  info: !0,
-  success: !0,
-  warning: !0,
-  textPrimary: !0,
-  textSecondary: !0,
-  textDisabled: !0
-}, D = S(), E = (e) => {
-  const {
-    align: t,
-    gutterBottom: o,
-    noWrap: a,
-    paragraph: i,
-    variant: s,
-    classes: p
-  } = e, n = {
-    root: ["root", s, e.align !== "inherit" && `align${c(t)}`, o && "gutterBottom", a && "noWrap", i && "paragraph"]
-  };
-  return R(n, P, p);
-}, A = M("span", {
-  name: "MuiTypography",
-  slot: "Root",
-  overridesResolver: (e, t) => {
-    const {
-      ownerState: o
-    } = e;
-    return [t.root, o.variant && t[o.variant], o.align !== "inherit" && t[`align${c(o.align)}`], o.noWrap && t.noWrap, o.gutterBottom && t.gutterBottom, o.paragraph && t.paragraph];
-  }
-})(w(({
-  theme: e
-}) => ({
-  margin: 0,
-  variants: [{
-    props: {
-      variant: "inherit"
-    },
-    style: {
-      // Some elements, like <button> on Chrome have default font that doesn't inherit, reset this.
-      font: "inherit",
-      lineHeight: "inherit",
-      letterSpacing: "inherit"
+const d = `
+  query suggestions($assembly: String!, $snpid: String!, $limit: Int) {
+    snpAutocompleteQuery(assembly: $assembly, snpid: $snpid, limit: $limit) {
+      id
+      coordinates {
+        chromosome
+        start
+        end
+      }
     }
-  }, ...Object.entries(e.typography).filter(([t, o]) => t !== "inherit" && o && typeof o == "object").map(([t, o]) => ({
-    props: {
-      variant: t
-    },
-    style: o
-  })), ...Object.entries(e.palette).filter(B()).map(([t]) => ({
-    props: {
-      color: t
-    },
-    style: {
-      color: (e.vars || e).palette[t].main
-    }
-  })), ...Object.entries(e.palette?.text || {}).filter(([, t]) => typeof t == "string").map(([t]) => ({
-    props: {
-      color: `text${c(t)}`
-    },
-    style: {
-      color: (e.vars || e).palette.text[t]
+  }
+`, u = `
+  query Genes(
+      $name_prefix: [String!]
+      $idprefix: [String!]
+      $limit: Int
+      $assembly: String!
+      $version: Int
+  ) {
+      gene(
+          name_prefix: $name_prefix
+          idprefix: $idprefix
+          limit: $limit
+          assembly: $assembly
+          orderby: "name"
+          version: $version
+      ) {
+          id
+          name
+          coordinates {
+              chromosome
+              start
+              end
+          }
+      }
+  }
+`, _ = `
+  query iCREQuery($accession_prefix: [String!], $limit: Int) {
+      iCREQuery(accession_prefix: $accession_prefix, limit: $limit) {
+          rdhs
+          accession
+          celltypes
+          coordinates {
+              start
+              end
+              chromosome
+          }
+      }
+  }
+`, h = `
+  query cCREAutocompleteQuery(
+    $accession: [String!]
+    $accession_prefix: [String!]
+    $assembly: String!
+    $includeiCREs: Boolean
+    $limit: Int
+  ) {
+    cCREAutocompleteQuery(
+      includeiCREs: $includeiCREs
+      assembly: $assembly
+      limit: $limit
+      accession: $accession
+      accession_prefix: $accession_prefix
+    ) {
+      accession
+      isiCRE
+      coordinates {
+        chromosome
+        start
+        end
+      }
     }
-  })), {
-    props: ({
-      ownerState: t
-    }) => t.align !== "inherit",
-    style: {
-      textAlign: "var(--Typography-textAlign)"
+  }
+`, C = `
+  query getv2v3CcreMapping($accessions: [String], $assembly: String!) {
+    ccreMappings: getv2cCREMappings(
+      v2_accession: $accessions
+      assembly: $assembly
+    ) {
+      input: v2_accession
+      input_latest_previous_version: ccre_version
+      input_region: v2_region
+      v4_match_or_intersecting: v4_accession
+      v4_region
     }
-  }, {
-    props: ({
-      ownerState: t
-    }) => t.noWrap,
-    style: {
-      overflow: "hidden",
-      textOverflow: "ellipsis",
-      whiteSpace: "nowrap"
+  }
+`, g = `
+query getGWASStudyMetadata($limit: Int, $studyname_prefix: [String]){
+    getGWASStudiesMetadata(limit: $limit, studyname_prefix: $studyname_prefix )
+    {
+        studyid
+        author
+        disease_trait
+        has_enrichment_info
+        population
+        parent_terms
+        total_ld_blocks
+        ld_blocks_overlapping_ccres
+        overlapping_ccres
     }
-  }, {
-    props: ({
-      ownerState: t
-    }) => t.gutterBottom,
-    style: {
-      marginBottom: "0.35em"
+}
+`, b = async (e, s, i, t) => (await fetch(i, {
+  method: "POST",
+  body: JSON.stringify({
+    query: _,
+    variables: {
+      accession_prefix: [e],
+      limit: s
     }
-  }, {
-    props: ({
-      ownerState: t
-    }) => t.paragraph,
-    style: {
-      marginBottom: 16
+  }),
+  headers: {
+    "Content-Type": "application/json"
+  },
+  signal: t
+})).json(), v = async (e, s, i, t, n, p) => {
+  const a = e.length === 12;
+  return (await fetch(n, {
+    method: "POST",
+    body: JSON.stringify({
+      query: h,
+      variables: {
+        ...a ? {
+          accession: [e.toUpperCase()]
+        } : {
+          accession_prefix: [e]
+        },
+        assembly: s,
+        limit: i,
+        includeiCREs: t
+      }
+    }),
+    headers: {
+      "Content-Type": "application/json"
+    },
+    signal: p
+  })).json();
+}, R = async (e, s, i, t) => (await fetch(i, {
+  method: "POST",
+  body: JSON.stringify({
+    query: C,
+    variables: {
+      accessions: [e],
+      assembly: s
     }
-  }]
-}))), b = {
-  h1: "h1",
-  h2: "h2",
-  h3: "h3",
-  h4: "h4",
-  h5: "h5",
-  h6: "h6",
-  subtitle1: "h6",
-  subtitle2: "h6",
-  body1: "p",
-  body2: "p",
-  inherit: "p"
-}, V = /* @__PURE__ */ j.forwardRef(function(t, o) {
-  const {
-    color: a,
-    ...i
-  } = C({
-    props: t,
-    name: "MuiTypography"
-  }), s = !N[a], p = D({
-    ...i,
-    ...s && {
-      color: a
+  }),
+  headers: {
+    "Content-Type": "application/json"
+  },
+  signal: t
+})).json(), x = async (e, s, i, t, n, p) => {
+  let a = t ? typeof t == "number" ? [t] : t : [s === "GRCh38" ? 40 : 25];
+  a = a.sort((o, r) => r - o);
+  const m = await Promise.all(a.map((o) => fetch(n, {
+    method: "POST",
+    body: JSON.stringify({
+      query: u,
+      variables: {
+        assembly: s.toLowerCase(),
+        ...s.toLowerCase() === "mm10" && e.toUpperCase().startsWith("ENSMUSG") || s.toLowerCase() === "grch38" && e.toUpperCase().startsWith("ENSG") ? {
+          idprefix: e.split(".")[0]
+        } : {
+          name_prefix: e
+        },
+        version: o,
+        limit: i
+      }
+    }),
+    headers: {
+      "Content-Type": "application/json"
+    },
+    signal: p
+  }).then((r) => r.json()))), l = /* @__PURE__ */ new Map();
+  return m.forEach((o, r) => {
+    (o.data.gene || []).forEach((c) => {
+      l.has(c.name) ? l.get(c.name).versions.push({
+        id: c.id,
+        version: a[r]
+      }) : l.set(c.name, {
+        gene: c,
+        versions: [{
+          id: c.id,
+          version: a[r]
+        }]
+      });
+    });
+  }), await Promise.all(Array.from(l.values()).map(async ({
+    gene: o,
+    versions: r
+  }) => {
+    const y = await E(o.name);
+    return {
+      ...o,
+      description: `${f(y || o.name)}`,
+      versions: r
+    };
+  }));
+}, f = (e) => e.split(" ").map((s) => s.charAt(0).toUpperCase() + s.slice(1)).join(" ");
+async function E(e) {
+  try {
+    const i = await (await fetch("https://clinicaltables.nlm.nih.gov/api/ncbi_genes/v3/search?authenticity_token=&terms=" + e.toUpperCase())).json(), t = i[3] && i[3].filter((n) => n[3] === e.toUpperCase());
+    return t && t.length >= 1 ? t[0][4] : null;
+  } catch {
+    return null;
+  }
+}
+const T = async (e, s, i, t, n) => (await fetch(t, {
+  method: "POST",
+  body: JSON.stringify({
+    query: d,
+    variables: {
+      assembly: s.toLowerCase(),
+      snpid: e,
+      limit: i
     }
-  }), {
-    align: n = "inherit",
-    className: m,
-    component: g,
-    gutterBottom: d = !1,
-    noWrap: x = !1,
-    paragraph: h = !1,
-    variant: l = "body1",
-    variantMapping: y = b,
-    ...f
-  } = p, u = {
-    ...p,
-    align: n,
-    color: a,
-    className: m,
-    component: g,
-    gutterBottom: d,
-    noWrap: x,
-    paragraph: h,
-    variant: l,
-    variantMapping: y
-  }, v = g || (h ? "p" : y[l] || b[l]) || "span", T = E(u);
-  return /* @__PURE__ */ W.jsx(A, {
-    as: v,
-    ref: o,
-    className: O(T.root, m),
-    ...f,
-    ownerState: u,
-    style: {
-      ...n !== "inherit" && {
-        "--Typography-textAlign": n
-      },
-      ...f.style
+  }),
+  headers: {
+    "Content-Type": "application/json"
+  },
+  signal: n
+})).json(), O = async (e, s, i, t) => (await fetch(i, {
+  method: "POST",
+  body: JSON.stringify({
+    query: g,
+    variables: {
+      studyname_prefix: [e],
+      limit: s
     }
-  });
-});
-process.env.NODE_ENV !== "production" && (V.propTypes = {
-  // ┌────────────────────────────── Warning ──────────────────────────────┐
-  // │ These PropTypes are generated from the TypeScript type definitions. │
-  // │    To update them, edit the d.ts file and run `pnpm proptypes`.     │
-  // └─────────────────────────────────────────────────────────────────────┘
-  /**
-   * Set the text-align on the component.
-   * @default 'inherit'
-   */
-  align: r.oneOf(["center", "inherit", "justify", "left", "right"]),
-  /**
-   * The content of the component.
-   */
-  children: r.node,
-  /**
-   * Override or extend the styles applied to the component.
-   */
-  classes: r.object,
-  /**
-   * @ignore
-   */
-  className: r.string,
-  /**
-   * The color of the component.
-   * It supports both default and custom theme colors, which can be added as shown in the
-   * [palette customization guide](https://mui.com/material-ui/customization/palette/#custom-colors).
-   */
-  color: r.oneOfType([r.oneOf(["primary", "secondary", "success", "error", "info", "warning", "textPrimary", "textSecondary", "textDisabled"]), r.string]),
-  /**
-   * The component used for the root node.
-   * Either a string to use a HTML element or a component.
-   */
-  component: r.elementType,
-  /**
-   * If `true`, the text will have a bottom margin.
-   * @default false
-   */
-  gutterBottom: r.bool,
-  /**
-   * If `true`, the text will not wrap, but instead will truncate with a text overflow ellipsis.
-   *
-   * Note that text overflow can only happen with block or inline-block level elements
-   * (the element needs to have a width in order to overflow).
-   * @default false
-   */
-  noWrap: r.bool,
-  /**
-   * If `true`, the element will be a paragraph element.
-   * @default false
-   * @deprecated Use the `component` prop instead. This prop will be removed in a future major release. See [Migrating from deprecated APIs](https://mui.com/material-ui/migration/migrating-from-deprecated-apis/) for more details.
-   */
-  paragraph: r.bool,
-  /**
-   * @ignore
-   */
-  style: r.object,
-  /**
-   * The system prop that allows defining system overrides as well as additional CSS styles.
-   */
-  sx: r.oneOfType([r.arrayOf(r.oneOfType([r.func, r.object, r.bool])), r.func, r.object]),
-  /**
-   * Applies the theme typography styles.
-   * @default 'body1'
-   */
-  variant: r.oneOfType([r.oneOf(["body1", "body2", "button", "caption", "h1", "h2", "h3", "h4", "h5", "h6", "inherit", "overline", "subtitle1", "subtitle2"]), r.string]),
-  /**
-   * The component maps the variant prop to a range of different HTML element types.
-   * For instance, subtitle1 to `<h6>`.
-   * If you wish to change that mapping, you can provide your own.
-   * Alternatively, you can use the `component` prop.
-   * @default {
-   *   h1: 'h1',
-   *   h2: 'h2',
-   *   h3: 'h3',
-   *   h4: 'h4',
-   *   h5: 'h5',
-   *   h6: 'h6',
-   *   subtitle1: 'h6',
-   *   subtitle2: 'h6',
-   *   body1: 'p',
-   *   body2: 'p',
-   *   inherit: 'p',
-   * }
-   */
-  variantMapping: r.object
-});
+  }),
+  headers: {
+    "Content-Type": "application/json"
+  },
+  signal: t
+})).json();
 export {
-  A as TypographyRoot,
-  V as default
+  h as CCRE_AUTOCOMPLETE_QUERY,
+  u as GENE_AUTOCOMPLETE_QUERY,
+  g as GWAS_AUTOCOMPLETE_QUERY,
+  _ as ICRE_AUTOCOMPLETE_QUERY,
+  C as LEGACY_CCRE_QUERY,
+  d as SNP_AUTOCOMPLETE_QUERY,
+  v as getCCREs,
+  x as getGenes,
+  b as getICREs,
+  R as getLegacyCCREs,
+  T as getSNPs,
+  O as getStudys
 };
 //# sourceMappingURL=ui-components.es34.js.map

package/dist/ui-components.es34.js.map

@@ -1 +1 @@
-{"version":3,"file":"ui-components.es34.js","sources":["../../../node_modules/.pnpm/@mui+material@7.3.9_@emotion+react@11.14.0_@types+react@19.2.14_react@19.2.4__@emotion+_5efc65b7a21bb615fd4ee8d4bf58b896/node_modules/@mui/material/esm/Typography/Typography.js"],"sourcesContent":["'use client';\n\nimport * as React from 'react';\nimport PropTypes from 'prop-types';\nimport clsx from 'clsx';\nimport composeClasses from '@mui/utils/composeClasses';\nimport { styled, internal_createExtendSxProp } from \"../zero-styled/index.js\";\nimport memoTheme from \"../utils/memoTheme.js\";\nimport { useDefaultProps } from \"../DefaultPropsProvider/index.js\";\nimport capitalize from \"../utils/capitalize.js\";\nimport createSimplePaletteValueFilter from \"../utils/createSimplePaletteValueFilter.js\";\nimport { getTypographyUtilityClass } from \"./typographyClasses.js\";\nimport { jsx as _jsx } from \"react/jsx-runtime\";\nconst v6Colors = {\n  primary: true,\n  secondary: true,\n  error: true,\n  info: true,\n  success: true,\n  warning: true,\n  textPrimary: true,\n  textSecondary: true,\n  textDisabled: true\n};\nconst extendSxProp = internal_createExtendSxProp();\nconst useUtilityClasses = ownerState => {\n  const {\n    align,\n    gutterBottom,\n    noWrap,\n    paragraph,\n    variant,\n    classes\n  } = ownerState;\n  const slots = {\n    root: ['root', variant, ownerState.align !== 'inherit' && `align${capitalize(align)}`, gutterBottom && 'gutterBottom', noWrap && 'noWrap', paragraph && 'paragraph']\n  };\n  return composeClasses(slots, getTypographyUtilityClass, classes);\n};\nexport const TypographyRoot = styled('span', {\n  name: 'MuiTypography',\n  slot: 'Root',\n  overridesResolver: (props, styles) => {\n    const {\n      ownerState\n    } = props;\n    return [styles.root, ownerState.variant && styles[ownerState.variant], ownerState.align !== 'inherit' && styles[`align${capitalize(ownerState.align)}`], ownerState.noWrap && styles.noWrap, ownerState.gutterBottom && styles.gutterBottom, ownerState.paragraph && styles.paragraph];\n  }\n})(memoTheme(({\n  theme\n}) => ({\n  margin: 0,\n  variants: [{\n    props: {\n      variant: 'inherit'\n    },\n    style: {\n      // Some elements, like <button> on Chrome have default font that doesn't inherit, reset this.\n      font: 'inherit',\n      lineHeight: 'inherit',\n      letterSpacing: 'inherit'\n    }\n  }, ...Object.entries(theme.typography).filter(([variant, value]) => variant !== 'inherit' && value && typeof value === 'object').map(([variant, value]) => ({\n    props: {\n      variant\n    },\n    style: value\n  })), ...Object.entries(theme.palette).filter(createSimplePaletteValueFilter()).map(([color]) => ({\n    props: {\n      color\n    },\n    style: {\n      color: (theme.vars || theme).palette[color].main\n    }\n  })), ...Object.entries(theme.palette?.text || {}).filter(([, value]) => typeof value === 'string').map(([color]) => ({\n    props: {\n      color: `text${capitalize(color)}`\n    },\n    style: {\n      color: (theme.vars || theme).palette.text[color]\n    }\n  })), {\n    props: ({\n      ownerState\n    }) => ownerState.align !== 'inherit',\n    style: {\n      textAlign: 'var(--Typography-textAlign)'\n    }\n  }, {\n    props: ({\n      ownerState\n    }) => ownerState.noWrap,\n    style: {\n      overflow: 'hidden',\n      textOverflow: 'ellipsis',\n      whiteSpace: 'nowrap'\n    }\n  }, {\n    props: ({\n      ownerState\n    }) => ownerState.gutterBottom,\n    style: {\n      marginBottom: '0.35em'\n    }\n  }, {\n    props: ({\n      ownerState\n    }) => ownerState.paragraph,\n    style: {\n      marginBottom: 16\n    }\n  }]\n})));\nconst defaultVariantMapping = {\n  h1: 'h1',\n  h2: 'h2',\n  h3: 'h3',\n  h4: 'h4',\n  h5: 'h5',\n  h6: 'h6',\n  subtitle1: 'h6',\n  subtitle2: 'h6',\n  body1: 'p',\n  body2: 'p',\n  inherit: 'p'\n};\nconst Typography = /*#__PURE__*/React.forwardRef(function Typography(inProps, ref) {\n  const {\n    color,\n    ...themeProps\n  } = useDefaultProps({\n    props: inProps,\n    name: 'MuiTypography'\n  });\n  const isSxColor = !v6Colors[color];\n  // TODO: Remove `extendSxProp` in v7\n  const props = extendSxProp({\n    ...themeProps,\n    ...(isSxColor && {\n      color\n    })\n  });\n  const {\n    align = 'inherit',\n    className,\n    component,\n    gutterBottom = false,\n    noWrap = false,\n    paragraph = false,\n    variant = 'body1',\n    variantMapping = defaultVariantMapping,\n    ...other\n  } = props;\n  const ownerState = {\n    ...props,\n    align,\n    color,\n    className,\n    component,\n    gutterBottom,\n    noWrap,\n    paragraph,\n    variant,\n    variantMapping\n  };\n  const Component = component || (paragraph ? 'p' : variantMapping[variant] || defaultVariantMapping[variant]) || 'span';\n  const classes = useUtilityClasses(ownerState);\n  return /*#__PURE__*/_jsx(TypographyRoot, {\n    as: Component,\n    ref: ref,\n    className: clsx(classes.root, className),\n    ...other,\n    ownerState: ownerState,\n    style: {\n      ...(align !== 'inherit' && {\n        '--Typography-textAlign': align\n      }),\n      ...other.style\n    }\n  });\n});\nprocess.env.NODE_ENV !== \"production\" ? Typography.propTypes /* remove-proptypes */ = {\n  // ┌────────────────────────────── Warning ──────────────────────────────┐\n  // │ These PropTypes are generated from the TypeScript type definitions. │\n  // │    To update them, edit the d.ts file and run `pnpm proptypes`.     │\n  // └─────────────────────────────────────────────────────────────────────┘\n  /**\n   * Set the text-align on the component.\n   * @default 'inherit'\n   */\n  align: PropTypes.oneOf(['center', 'inherit', 'justify', 'left', 'right']),\n  /**\n   * The content of the component.\n   */\n  children: PropTypes.node,\n  /**\n   * Override or extend the styles applied to the component.\n   */\n  classes: PropTypes.object,\n  /**\n   * @ignore\n   */\n  className: PropTypes.string,\n  /**\n   * The color of the component.\n   * It supports both default and custom theme colors, which can be added as shown in the\n   * [palette customization guide](https://mui.com/material-ui/customization/palette/#custom-colors).\n   */\n  color: PropTypes /* @typescript-to-proptypes-ignore */.oneOfType([PropTypes.oneOf(['primary', 'secondary', 'success', 'error', 'info', 'warning', 'textPrimary', 'textSecondary', 'textDisabled']), PropTypes.string]),\n  /**\n   * The component used for the root node.\n   * Either a string to use a HTML element or a component.\n   */\n  component: PropTypes.elementType,\n  /**\n   * If `true`, the text will have a bottom margin.\n   * @default false\n   */\n  gutterBottom: PropTypes.bool,\n  /**\n   * If `true`, the text will not wrap, but instead will truncate with a text overflow ellipsis.\n   *\n   * Note that text overflow can only happen with block or inline-block level elements\n   * (the element needs to have a width in order to overflow).\n   * @default false\n   */\n  noWrap: PropTypes.bool,\n  /**\n   * If `true`, the element will be a paragraph element.\n   * @default false\n   * @deprecated Use the `component` prop instead. This prop will be removed in a future major release. See [Migrating from deprecated APIs](https://mui.com/material-ui/migration/migrating-from-deprecated-apis/) for more details.\n   */\n  paragraph: PropTypes.bool,\n  /**\n   * @ignore\n   */\n  style: PropTypes.object,\n  /**\n   * The system prop that allows defining system overrides as well as additional CSS styles.\n   */\n  sx: PropTypes.oneOfType([PropTypes.arrayOf(PropTypes.oneOfType([PropTypes.func, PropTypes.object, PropTypes.bool])), PropTypes.func, PropTypes.object]),\n  /**\n   * Applies the theme typography styles.\n   * @default 'body1'\n   */\n  variant: PropTypes /* @typescript-to-proptypes-ignore */.oneOfType([PropTypes.oneOf(['body1', 'body2', 'button', 'caption', 'h1', 'h2', 'h3', 'h4', 'h5', 'h6', 'inherit', 'overline', 'subtitle1', 'subtitle2']), PropTypes.string]),\n  /**\n   * The component maps the variant prop to a range of different HTML element types.\n   * For instance, subtitle1 to `<h6>`.\n   * If you wish to change that mapping, you can provide your own.\n   * Alternatively, you can use the `component` prop.\n   * @default {\n   *   h1: 'h1',\n   *   h2: 'h2',\n   *   h3: 'h3',\n   *   h4: 'h4',\n   *   h5: 'h5',\n   *   h6: 'h6',\n   *   subtitle1: 'h6',\n   *   subtitle2: 'h6',\n   *   body1: 'p',\n   *   body2: 'p',\n   *   inherit: 'p',\n   * }\n   */\n  variantMapping: PropTypes /* @typescript-to-proptypes-ignore */.object\n} : void 0;\nexport default 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+{"version":3,"file":"ui-components.es34.js","sources":["../src/components/GenomeSearch/queries.ts"],"sourcesContent":["import { GenomeSearchProps } from \"./types\";\n\nexport const SNP_AUTOCOMPLETE_QUERY = `\n  query suggestions($assembly: String!, $snpid: String!, $limit: Int) {\n    snpAutocompleteQuery(assembly: $assembly, snpid: $snpid, limit: $limit) {\n      id\n      coordinates {\n        chromosome\n        start\n        end\n      }\n    }\n  }\n`;\n\nexport const GENE_AUTOCOMPLETE_QUERY = `\n  query Genes(\n      $name_prefix: [String!]\n      $idprefix: [String!]\n      $limit: Int\n      $assembly: String!\n      $version: Int\n  ) {\n      gene(\n          name_prefix: $name_prefix\n          idprefix: $idprefix\n          limit: $limit\n          assembly: $assembly\n          orderby: \"name\"\n          version: $version\n      ) {\n          id\n          name\n          coordinates {\n              chromosome\n              start\n              end\n          }\n      }\n  }\n`;\n\nexport const ICRE_AUTOCOMPLETE_QUERY = `\n  query iCREQuery($accession_prefix: [String!], $limit: Int) {\n      iCREQuery(accession_prefix: $accession_prefix, limit: $limit) {\n          rdhs\n          accession\n          celltypes\n          coordinates {\n              start\n              end\n              chromosome\n          }\n      }\n  }\n`;\n\nexport const CCRE_AUTOCOMPLETE_QUERY = `\n  query cCREAutocompleteQuery(\n    $accession: [String!]\n    $accession_prefix: [String!]\n    $assembly: String!\n    $includeiCREs: Boolean\n    $limit: Int\n  ) {\n    cCREAutocompleteQuery(\n      includeiCREs: $includeiCREs\n      assembly: $assembly\n      limit: $limit\n      accession: $accession\n      accession_prefix: $accession_prefix\n    ) {\n      accession\n      isiCRE\n      coordinates {\n        chromosome\n        start\n        end\n      }\n    }\n  }\n`;\n\nexport const LEGACY_CCRE_QUERY = `\n  query getv2v3CcreMapping($accessions: [String], $assembly: String!) {\n    ccreMappings: getv2cCREMappings(\n      v2_accession: $accessions\n      assembly: $assembly\n    ) {\n      input: v2_accession\n      input_latest_previous_version: ccre_version\n      input_region: v2_region\n      v4_match_or_intersecting: v4_accession\n      v4_region\n    }\n  }\n`\n\nexport const GWAS_AUTOCOMPLETE_QUERY = `\nquery getGWASStudyMetadata($limit: Int, $studyname_prefix: [String]){\n    getGWASStudiesMetadata(limit: $limit, studyname_prefix: $studyname_prefix )\n    {\n        studyid\n        author\n        disease_trait\n        has_enrichment_info\n        population\n        parent_terms\n        total_ld_blocks\n        ld_blocks_overlapping_ccres\n        overlapping_ccres\n    }\n}\n`;\n\nexport const getICREs = async (value: string, limit: number, url: string, signal?: AbortSignal) => {\n  const response = await fetch(url, {\n    method: \"POST\",\n    body: JSON.stringify({\n      query: ICRE_AUTOCOMPLETE_QUERY,\n      variables: {\n        accession_prefix: [value],\n        limit: limit,\n      },\n    }),\n    headers: { \"Content-Type\": \"application/json\" },\n    signal,\n  });\n  return response.json();\n};\n\nexport const getCCREs = async (value: string, assembly: GenomeSearchProps[\"assembly\"], limit: number, showiCREFlag: boolean, url: string, signal?: AbortSignal) => {\n  const isExactAccession = value.length === 12;\n  const response = await fetch(url, {\n    method: \"POST\",\n    body: JSON.stringify({\n      query: CCRE_AUTOCOMPLETE_QUERY,\n      variables: {\n        ...(isExactAccession\n          ? { accession: [value.toUpperCase()] }\n          : { accession_prefix: [value] }),\n        assembly,\n        limit,\n        includeiCREs: showiCREFlag,\n      },\n    }),\n    headers: { \"Content-Type\": \"application/json\" },\n    signal,\n  });\n  return response.json();\n};\n\nexport const getLegacyCCREs = async (value: string, assembly: GenomeSearchProps[\"assembly\"], url: string, signal?: AbortSignal) => {\n  const response = await fetch(url, {\n    method: \"POST\",\n    body: JSON.stringify({\n      query: LEGACY_CCRE_QUERY,\n      variables: {\n        accessions: [value],\n        assembly,\n      },\n    }),\n    headers: { \"Content-Type\": \"application/json\" },\n    signal,\n  });\n  return response.json();\n};\n\nexport const getGenes = async (\n  value: string,\n  assembly: GenomeSearchProps[\"assembly\"],\n  limit: number,\n  geneVersions: GenomeSearchProps[\"geneVersion\"],\n  url: string,\n  signal?: AbortSignal\n) => {\n  let versions = geneVersions\n    ? typeof geneVersions === \"number\"\n      ? [geneVersions]\n      : geneVersions\n    : [assembly === \"GRCh38\" ? 40 : 25];\n\n  // sort versions from high to low (prioritize newest versions in map)\n  versions = versions.sort((a, b) => b - a);\n\n  // Fetch genes for all versions\n  const versionResults = await Promise.all(\n  versions.map((version) =>\n    fetch(url, {\n      method: \"POST\",\n      body: JSON.stringify({\n        query: GENE_AUTOCOMPLETE_QUERY,\n        variables: {\n          assembly: assembly.toLowerCase(),\n          ...(\n            (\n              (assembly.toLowerCase() === \"mm10\" && value.toUpperCase().startsWith(\"ENSMUSG\")) ||\n              (assembly.toLowerCase() === \"grch38\" && value.toUpperCase().startsWith(\"ENSG\"))\n            )\n              ? { idprefix: value.split(\".\")[0] }\n              : { name_prefix: value }\n          ),\n          version: version,\n          limit: limit,\n        },\n      }),\n      headers: { \"Content-Type\": \"application/json\" },\n      signal,\n    }).then((res) => res.json())\n  )\n);\n\n  // Combine and deduplicate results\n  const geneMap = new Map<string, { gene: any; versions: { id: string; version: number }[] }>();\n\n  versionResults.forEach((result, idx) => {\n    const genes = result.data.gene || [];\n    genes.forEach((gene: any) => {\n      if (!geneMap.has(gene.name)) {\n        geneMap.set(gene.name, { gene, versions: [{ id: gene.id, version: versions[idx] }] });\n      } else {\n        // if gene already exists, just add legacy versions to list.\n        const existing = geneMap.get(gene.name)!;\n        existing.versions.push({ id: gene.id, version: versions[idx] });\n      }\n    });\n  });\n\n  // Convert map to array and fetch descriptions\n  const out = await Promise.all(\n    Array.from(geneMap.values()).map(async ({ gene, versions }) => {\n      const description = await getDescription(gene.name);\n      return {\n        ...gene,\n        description: `${toTitleCase(description || gene.name)}`,\n        versions,\n      };\n    })\n  );\n\n  return out;\n};\nconst toTitleCase = (str: string) =>\n  str\n    .split(\" \")\n    .map((word) => word.charAt(0).toUpperCase() + word.slice(1))\n    .join(\" \");\n\nasync function getDescription(name: string): Promise<string | null> {\n  try {\n    const response = await fetch(\n      \"https://clinicaltables.nlm.nih.gov/api/ncbi_genes/v3/search?authenticity_token=&terms=\" + name.toUpperCase()\n    );\n    const data = await response.json();\n    const matches = data[3] && data[3].filter((x: string[]) => x[3] === name.toUpperCase());\n    return matches && matches.length >= 1 ? matches[0][4] : null;\n  } catch {\n    return null;\n  }\n}\n\nexport const getSNPs = async (value: string, assembly: GenomeSearchProps[\"assembly\"], limit: number, url: string, signal?: AbortSignal) => {\n  const response = await fetch(url, {\n    method: \"POST\",\n    body: JSON.stringify({\n      query: SNP_AUTOCOMPLETE_QUERY,\n      variables: {\n        assembly: assembly.toLowerCase(),\n        snpid: value,\n        limit: limit,\n      },\n    }),\n    headers: { \"Content-Type\": \"application/json\" },\n    signal,\n  });\n  return response.json();\n};\n\nexport const getStudys = async (value: string, limit: number, url: string, signal?: AbortSignal) => {\n  const response = await fetch(url, {\n    method: \"POST\",\n    body: JSON.stringify({\n      query: GWAS_AUTOCOMPLETE_QUERY,\n      variables: {\n        studyname_prefix: [value],\n        limit,\n      },\n    }),\n    headers: { \"Content-Type\": \"application/json\" },\n    signal,\n  });\n\n  return 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package/dist/ui-components.es340.js

@@ -1,29 +1,79 @@
-import { r as u } from "./ui-components.es242.js";
-function a(e, r = "") {
-  return e.displayName || e.name || r;
-}
-function i(e, r, t) {
-  const f = a(r);
-  return e.displayName || (f !== "" ? `${t}(${f})` : t);
-}
-function n(e) {
-  if (e != null) {
-    if (typeof e == "string")
-      return e;
-    if (typeof e == "function")
-      return a(e, "Component");
-    if (typeof e == "object")
-      switch (e.$$typeof) {
-        case u.ForwardRef:
-          return i(e, e.render, "ForwardRef");
-        case u.Memo:
-          return i(e, e.type, "memo");
-        default:
-          return;
-      }
+import p from "./ui-components.es332.js";
+import r from "./ui-components.es334.js";
+import c from "./ui-components.es333.js";
+import { createUnaryUnit as a, getValue as l } from "./ui-components.es213.js";
+import { handleBreakpoints as s } from "./ui-components.es335.js";
+const u = (o) => {
+  if (o.gap !== void 0 && o.gap !== null) {
+    const e = a(o.theme, "spacing", 8, "gap"), n = (t) => ({
+      gap: l(e, t)
+    });
+    return s(o, o.gap, n);
   }
-}
+  return null;
+};
+u.propTypes = process.env.NODE_ENV !== "production" ? {
+  gap: p
+} : {};
+u.filterProps = ["gap"];
+const i = (o) => {
+  if (o.columnGap !== void 0 && o.columnGap !== null) {
+    const e = a(o.theme, "spacing", 8, "columnGap"), n = (t) => ({
+      columnGap: l(e, t)
+    });
+    return s(o, o.columnGap, n);
+  }
+  return null;
+};
+i.propTypes = process.env.NODE_ENV !== "production" ? {
+  columnGap: p
+} : {};
+i.filterProps = ["columnGap"];
+const m = (o) => {
+  if (o.rowGap !== void 0 && o.rowGap !== null) {
+    const e = a(o.theme, "spacing", 8, "rowGap"), n = (t) => ({
+      rowGap: l(e, t)
+    });
+    return s(o, o.rowGap, n);
+  }
+  return null;
+};
+m.propTypes = process.env.NODE_ENV !== "production" ? {
+  rowGap: p
+} : {};
+m.filterProps = ["rowGap"];
+const g = r({
+  prop: "gridColumn"
+}), d = r({
+  prop: "gridRow"
+}), f = r({
+  prop: "gridAutoFlow"
+}), w = r({
+  prop: "gridAutoColumns"
+}), G = r({
+  prop: "gridAutoRows"
+}), A = r({
+  prop: "gridTemplateColumns"
+}), T = r({
+  prop: "gridTemplateRows"
+}), y = r({
+  prop: "gridTemplateAreas"
+}), P = r({
+  prop: "gridArea"
+});
+c(u, i, m, g, d, f, w, G, A, T, y, P);
 export {
-  n as default
+  i as columnGap,
+  u as gap,
+  P as gridArea,
+  w as gridAutoColumns,
+  f as gridAutoFlow,
+  G as gridAutoRows,
+  g as gridColumn,
+  d as gridRow,
+  y as gridTemplateAreas,
+  A as gridTemplateColumns,
+  T as gridTemplateRows,
+  m as rowGap
 };
 //# sourceMappingURL=ui-components.es340.js.map