@weng-lab/ui-components 3.0.0-beta.0 → 3.0.0

package/dist/ui-components.es18.js

@@ -1,9 +1,57 @@
-import { j as o } from "./ui-components.es15.js";
-import t from "./ui-components.es77.js";
-const n = t(/* @__PURE__ */ o.jsx("path", {
-  d: "M5 20h14v-2H5zM19 9h-4V3H9v6H5l7 7z"
-}), "Download");
+const s = async (e, n) => {
+  try {
+    const a = await fetch(e, {
+      method: "HEAD"
+    });
+    if (!a.ok)
+      throw new Error("Error fetching file size for " + e);
+    const t = a.headers.get("Content-Length");
+    t && n(parseInt(t, 10));
+  } catch (a) {
+    console.error(a), n(-1);
+  }
+}, o = (e) => e === -1 ? "Unknown Size" : (e / 1e6).toFixed(1) + " MB", i = (e) => {
+  switch (e) {
+    case "atac":
+      return "ATAC";
+    case "ctcf":
+      return "CTCF";
+    case "dnase":
+      return "DNase";
+    case "h3k27ac":
+      return "H3K27ac";
+    case "h3k4me3":
+      return "H3K4me3";
+  }
+};
+function f(e) {
+  const {
+    dnase: n,
+    h3k27ac: a,
+    h3k4me3: t,
+    ctcf: c,
+    atac: r
+  } = e;
+  return n && a && t && c && r ? "All assays available" : !n && !a && !t && !c && !r ? "No assays available" : `Available:
+${n ? `DNase
+` : ""}${a ? `H3K27ac
+` : ""}${t ? `H3K4me3
+` : ""}${c ? `CTCF
+` : ""}${r ? `ATAC
+` : ""}`;
+}
+const h = {
+  dnase: "#06DA93",
+  h3k27ac: "#FFCD00",
+  h3k4me3: "#FF0000",
+  ctcf: "#00B0F0",
+  atac: "#02c7b9"
+};
 export {
-  n as default
+  h as ASSAY_COLORS,
+  f as assayHoverInfo,
+  s as fetchFileSize,
+  i as formatAssay,
+  o as formatFileSize
 };
 //# sourceMappingURL=ui-components.es18.js.map

package/dist/ui-components.es18.js.map

@@ -1 +1 @@
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+{"version":3,"file":"ui-components.es18.js","sources":["../src/components/BiosampleTable/helpers.ts"],"sourcesContent":["/**\n * \n * @param url \n * @param handleSetState \n * \n * Attempts to fetch the file size, and sets state with given fn. -1 if unsucessful\n */\nexport const fetchFileSize = async (url: string, handleSetState: (fileSize: number) => void) => {\n  try {\n    const response = await fetch(url, { method: \"HEAD\" });\n    if (!response.ok) {\n      throw new Error(\"Error fetching file size for \" + url)\n    }\n    const contentLength = response.headers.get(\"Content-Length\");\n    if (contentLength) {\n      handleSetState(parseInt(contentLength, 10));\n    }\n  } catch (error) {\n    console.error(error);\n    handleSetState(-1)\n  }\n};\n\nexport const formatFileSize = (fileSize: number) => fileSize === -1 ? \"Unknown Size\" : (fileSize / 1000000).toFixed(1) + \" MB\"\n/**\n *\n * @param assay\n * @returns Formatted assay name\n */\nexport const formatAssay = (assay: CcreAssay) => {\n  switch (assay) {\n    case \"atac\":\n      return \"ATAC\";\n    case \"ctcf\":\n      return \"CTCF\";\n    case \"dnase\":\n      return \"DNase\";\n    case \"h3k27ac\":\n      return \"H3K27ac\";\n    case \"h3k4me3\":\n      return \"H3K4me3\";\n  }\n};\n\nimport { CcreAssay } from \"./types\";\n\n/**\n *\n * @param assays\n * @returns string to display on hover above available assay wheel\n */\nexport function assayHoverInfo(assays: Record<CcreAssay, string | null>) {\n  const { dnase, h3k27ac, h3k4me3, ctcf, atac } = assays;\n\n  if (dnase && h3k27ac && h3k4me3 && ctcf && atac) {\n    return \"All assays available\";\n  } else if (!dnase && !h3k27ac && !h3k4me3 && !ctcf && !atac) {\n    return \"No assays available\";\n  } else\n    return `Available:\\n${dnase ? \"DNase\\n\" : \"\"}${h3k27ac ? \"H3K27ac\\n\" : \"\"}${h3k4me3 ? \"H3K4me3\\n\" : \"\"}${ctcf ? \"CTCF\\n\" : \"\"}${\n      atac ? \"ATAC\\n\" : \"\"\n    }`;\n}\n\nexport const ASSAY_COLORS: Record<CcreAssay, string> = {\n  dnase: \"#06DA93\",\n  h3k27ac: \"#FFCD00\",\n  h3k4me3: \"#FF0000\",\n  ctcf: \"#00B0F0\",\n  atac: \"#02c7b9\",\n};"],"names":["fetchFileSize","url","handleSetState","response","fetch","method","ok","Error","contentLength","headers","get","parseInt","error","console","formatFileSize","fileSize","toFixed","formatAssay","assay","assayHoverInfo","assays","dnase","h3k27ac","h3k4me3","ctcf","atac","ASSAY_COLORS"],"mappings":"AAOO,MAAMA,IAAgB,OAAOC,GAAaC,MAA+C;AAC9F,MAAI;AACF,UAAMC,IAAW,MAAMC,MAAMH,GAAK;AAAA,MAAEI,QAAQ;AAAA,IAAA,CAAQ;AACpD,QAAI,CAACF,EAASG;AACZ,YAAM,IAAIC,MAAM,kCAAkCN,CAAG;AAEvD,UAAMO,IAAgBL,EAASM,QAAQC,IAAI,gBAAgB;AAC3D,IAAIF,KACFN,EAAeS,SAASH,GAAe,EAAE,CAAC;AAAA,EAE9C,SAASI,GAAO;AACdC,YAAQD,MAAMA,CAAK,GACnBV,EAAe,EAAE;AAAA,EACnB;AACF,GAEaY,IAAiBA,CAACC,MAAqBA,MAAa,KAAK,kBAAkBA,IAAW,KAASC,QAAQ,CAAC,IAAI,OAM5GC,IAAcA,CAACC,MAAqB;AAC/C,UAAQA,GAAAA;AAAAA,IACN,KAAK;AACH,aAAO;AAAA,IACT,KAAK;AACH,aAAO;AAAA,IACT,KAAK;AACH,aAAO;AAAA,IACT,KAAK;AACH,aAAO;AAAA,IACT,KAAK;AACH,aAAO;AAAA,EAAA;AAEb;AASO,SAASC,EAAeC,GAA0C;AACvE,QAAM;AAAA,IAAEC,OAAAA;AAAAA,IAAOC,SAAAA;AAAAA,IAASC,SAAAA;AAAAA,IAASC,MAAAA;AAAAA,IAAMC,MAAAA;AAAAA,EAAAA,IAASL;AAEhD,SAAIC,KAASC,KAAWC,KAAWC,KAAQC,IAClC,yBACE,CAACJ,KAAS,CAACC,KAAW,CAACC,KAAW,CAACC,KAAQ,CAACC,IAC9C,wBAEA;AAAA,EAAeJ,IAAQ;AAAA,IAAY,EAAE,GAAGC,IAAU;AAAA,IAAc,EAAE,GAAGC,IAAU;AAAA,IAAc,EAAE,GAAGC,IAAO;AAAA,IAAW,EAAE,GAC3HC,IAAO;AAAA,IAAW,EAAE;AAE1B;AAEO,MAAMC,IAA0C;AAAA,EACrDL,OAAO;AAAA,EACPC,SAAS;AAAA,EACTC,SAAS;AAAA,EACTC,MAAM;AAAA,EACNC,MAAM;AACR;"}

package/dist/ui-components.es180.js

@@ -1,26 +1,15 @@
-import r from "./ui-components.es89.js";
-import a from "./ui-components.es118.js";
-function u(n) {
-  const {
-    prototype: e = {}
-  } = n;
-  return !!e.isReactComponent;
+import * as t from "react";
+import c from "./ui-components.es95.js";
+function f(e) {
+  const r = t.useRef(e);
+  return c(() => {
+    r.current = e;
+  }), t.useRef((...u) => (
+    // @ts-expect-error hide `this`
+    (0, r.current)(...u)
+  )).current;
 }
-function l(n, e, c, p, f) {
-  const o = n[e], s = f || e;
-  if (o == null || // When server-side rendering React doesn't warn either.
-  // This is not an accurate check for SSR.
-  // This is only in place for Emotion compat.
-  // TODO: Revisit once https://github.com/facebook/react/issues/20047 is resolved.
-  typeof window > "u")
-    return null;
-  let t;
-  const i = o.type;
-  return typeof i == "function" && !u(i) && (t = "Did you accidentally use a plain function component for an element instead?"), t !== void 0 ? new Error(`Invalid ${p} \`${s}\` supplied to \`${c}\`. Expected an element that can hold a ref. ${t} For more information see https://mui.com/r/caveat-with-refs-guide`) : null;
-}
-const m = a(r.element, l);
-m.isRequired = a(r.element.isRequired, l);
 export {
-  m as default
+  f as default
 };
 //# sourceMappingURL=ui-components.es180.js.map

package/dist/ui-components.es180.js.map

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package/dist/ui-components.es181.js

@@ -1,10 +1,8 @@
-function p(r, n, l, t, u) {
-  if (process.env.NODE_ENV === "production")
-    return null;
-  const e = r[n], o = u || n;
-  return e == null ? null : e && e.nodeType !== 1 ? new Error(`Invalid ${t} \`${o}\` supplied to \`${l}\`. Expected an HTMLElement.`) : null;
+import * as e from "react";
+function t(r) {
+  return parseInt(e.version, 10) >= 19 ? r?.props?.ref || null : r?.ref || null;
 }
 export {
-  p as default
+  t as default
 };
 //# sourceMappingURL=ui-components.es181.js.map

package/dist/ui-components.es181.js.map

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package/dist/ui-components.es182.js

@@ -1,10 +1,200 @@
-import r from "./ui-components.es99.js";
-import e from "./ui-components.es100.js";
-function l(t) {
-  return r("MuiToolbar", t);
+import * as f from "react";
+import t from "./ui-components.es89.js";
+import W from "./ui-components.es90.js";
+import { j as k } from "./ui-components.es15.js";
+import { reflow as B, getTransitionProps as v } from "./ui-components.es319.js";
+import J from "./ui-components.es320.js";
+import M from "./ui-components.es178.js";
+import Q from "./ui-components.es155.js";
+import U from "./ui-components.es181.js";
+import X from "./ui-components.es174.js";
+function y(m) {
+  return `scale(${m}, ${m ** 2})`;
 }
-e("MuiToolbar", ["root", "gutters", "regular", "dense"]);
+const Y = {
+  entering: {
+    opacity: 1,
+    transform: y(1)
+  },
+  entered: {
+    opacity: 1,
+    transform: "none"
+  }
+}, E = typeof navigator < "u" && /^((?!chrome|android).)*(safari|mobile)/i.test(navigator.userAgent) && /(os |version\/)15(.|_)4/i.test(navigator.userAgent), h = /* @__PURE__ */ f.forwardRef(function(A, w) {
+  const {
+    addEndListener: x,
+    appear: D = !0,
+    children: l,
+    easing: R,
+    in: T,
+    onEnter: b,
+    onEntered: H,
+    onEntering: L,
+    onExit: j,
+    onExited: O,
+    onExiting: F,
+    style: p,
+    timeout: o = "auto",
+    // eslint-disable-next-line react/prop-types
+    TransitionComponent: P = J,
+    ...S
+  } = A, C = M(), g = f.useRef(), s = W(), c = f.useRef(null), G = Q(c, U(l), w), a = (n) => (r) => {
+    if (n) {
+      const e = c.current;
+      r === void 0 ? n(e) : n(e, r);
+    }
+  }, N = a(L), _ = a((n, r) => {
+    B(n);
+    const {
+      duration: e,
+      delay: d,
+      easing: i
+    } = v({
+      style: p,
+      timeout: o,
+      easing: R
+    }, {
+      mode: "enter"
+    });
+    let u;
+    o === "auto" ? (u = s.transitions.getAutoHeightDuration(n.clientHeight), g.current = u) : u = e, n.style.transition = [s.transitions.create("opacity", {
+      duration: u,
+      delay: d
+    }), s.transitions.create("transform", {
+      duration: E ? u : u * 0.666,
+      delay: d,
+      easing: i
+    })].join(","), b && b(n, r);
+  }), $ = a(H), q = a(F), z = a((n) => {
+    const {
+      duration: r,
+      delay: e,
+      easing: d
+    } = v({
+      style: p,
+      timeout: o,
+      easing: R
+    }, {
+      mode: "exit"
+    });
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+      delay: e
+    }), s.transitions.create("transform", {
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+      delay: E ? e : e || i * 0.333,
+      easing: d
+    })].join(","), n.style.opacity = 0, n.style.transform = y(0.75), j && j(n);
+  }), K = a(O), V = (n) => {
+    o === "auto" && C.start(g.current || 0, n), x && x(c.current, n);
+  };
+  return /* @__PURE__ */ k.jsx(P, {
+    appear: D,
+    in: T,
+    nodeRef: c,
+    onEnter: _,
+    onEntered: $,
+    onEntering: N,
+    onExit: z,
+    onExited: K,
+    onExiting: q,
+    addEndListener: V,
+    timeout: o === "auto" ? null : o,
+    ...S,
+    children: (n, {
+      ownerState: r,
+      ...e
+    }) => /* @__PURE__ */ f.cloneElement(l, {
+      style: {
+        opacity: 0,
+        transform: y(0.75),
+        visibility: n === "exited" && !T ? "hidden" : void 0,
+        ...Y[n],
+        ...p,
+        ...l.props.style
+      },
+      ref: G,
+      ...e
+    })
+  });
+});
+process.env.NODE_ENV !== "production" && (h.propTypes = {
+  // ┌────────────────────────────── Warning ──────────────────────────────┐
+  // │ These PropTypes are generated from the TypeScript type definitions. │
+  // │    To update them, edit the d.ts file and run `pnpm proptypes`.     │
+  // └─────────────────────────────────────────────────────────────────────┘
+  /**
+   * Add a custom transition end trigger. Called with the transitioning DOM
+   * node and a done callback. Allows for more fine grained transition end
+   * logic. Note: Timeouts are still used as a fallback if provided.
+   */
+  addEndListener: t.func,
+  /**
+   * Perform the enter transition when it first mounts if `in` is also `true`.
+   * Set this to `false` to disable this behavior.
+   * @default true
+   */
+  appear: t.bool,
+  /**
+   * A single child content element.
+   */
+  children: X.isRequired,
+  /**
+   * The transition timing function.
+   * You may specify a single easing or a object containing enter and exit values.
+   */
+  easing: t.oneOfType([t.shape({
+    enter: t.string,
+    exit: t.string
+  }), t.string]),
+  /**
+   * If `true`, the component will transition in.
+   */
+  in: t.bool,
+  /**
+   * @ignore
+   */
+  onEnter: t.func,
+  /**
+   * @ignore
+   */
+  onEntered: t.func,
+  /**
+   * @ignore
+   */
+  onEntering: t.func,
+  /**
+   * @ignore
+   */
+  onExit: t.func,
+  /**
+   * @ignore
+   */
+  onExited: t.func,
+  /**
+   * @ignore
+   */
+  onExiting: t.func,
+  /**
+   * @ignore
+   */
+  style: t.object,
+  /**
+   * The duration for the transition, in milliseconds.
+   * You may specify a single timeout for all transitions, or individually with an object.
+   *
+   * Set to 'auto' to automatically calculate transition time based on height.
+   * @default 'auto'
+   */
+  timeout: t.oneOfType([t.oneOf(["auto"]), t.number, t.shape({
+    appear: t.number,
+    enter: t.number,
+    exit: t.number
+  })])
+});
+h && (h.muiSupportAuto = !0);
 export {
-  l as getToolbarUtilityClass
+  h as default
 };
 //# sourceMappingURL=ui-components.es182.js.map

package/dist/ui-components.es182.js.map

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package/dist/ui-components.es183.js

@@ -1,11 +1,192 @@
-import o from "./ui-components.es99.js";
-import e from "./ui-components.es100.js";
-function l(t) {
-  return o("MuiTooltip", t);
-}
-const r = e("MuiTooltip", ["popper", "popperInteractive", "popperArrow", "popperClose", "tooltip", "tooltipArrow", "touch", "tooltipPlacementLeft", "tooltipPlacementRight", "tooltipPlacementTop", "tooltipPlacementBottom", "arrow"]);
+import { useRtl as x } from "./ui-components.es103.js";
+import o from "./ui-components.es89.js";
+import * as E from "react";
+import M from "./ui-components.es317.js";
+import { j as q } from "./ui-components.es15.js";
+import { useDefaultProps as k } from "./ui-components.es92.js";
+import v from "./ui-components.es48.js";
+import w from "./ui-components.es132.js";
+import e from "./ui-components.es175.js";
+const D = v(M, {
+  name: "MuiPopper",
+  slot: "Root"
+})({}), N = /* @__PURE__ */ E.forwardRef(function(t, r) {
+  const n = x(), p = k({
+    props: t,
+    name: "MuiPopper"
+  }), {
+    anchorEl: s,
+    component: a,
+    components: f,
+    componentsProps: i,
+    container: m,
+    disablePortal: c,
+    keepMounted: l,
+    modifiers: d,
+    open: u,
+    placement: b,
+    popperOptions: y,
+    popperRef: h,
+    transition: O,
+    slots: P,
+    slotProps: R,
+    ...T
+  } = p, j = P?.root ?? f?.Root, g = {
+    anchorEl: s,
+    container: m,
+    disablePortal: c,
+    keepMounted: l,
+    modifiers: d,
+    open: u,
+    placement: b,
+    popperOptions: y,
+    popperRef: h,
+    transition: O,
+    ...T
+  };
+  return /* @__PURE__ */ q.jsx(D, {
+    as: a,
+    direction: n ? "rtl" : "ltr",
+    slots: {
+      root: j
+    },
+    slotProps: R ?? i,
+    ...g,
+    ref: r
+  });
+});
+process.env.NODE_ENV !== "production" && (N.propTypes = {
+  // ┌────────────────────────────── Warning ──────────────────────────────┐
+  // │ These PropTypes are generated from the TypeScript type definitions. │
+  // │ To update them, edit the TypeScript types and run `pnpm proptypes`. │
+  // └─────────────────────────────────────────────────────────────────────┘
+  /**
+   * An HTML element, [virtualElement](https://popper.js.org/docs/v2/virtual-elements/),
+   * or a function that returns either.
+   * It's used to set the position of the popper.
+   * The return value will passed as the reference object of the Popper instance.
+   */
+  anchorEl: o.oneOfType([e, o.object, o.func]),
+  /**
+   * Popper render function or node.
+   */
+  children: o.oneOfType([o.node, o.func]),
+  /**
+   * The component used for the root node.
+   * Either a string to use a HTML element or a component.
+   */
+  component: o.elementType,
+  /**
+   * The components used for each slot inside the Popper.
+   * Either a string to use a HTML element or a component.
+   *
+   * @deprecated use the `slots` prop instead. This prop will be removed in a future major release. [How to migrate](/material-ui/migration/migrating-from-deprecated-apis/).
+   * @default {}
+   */
+  components: o.shape({
+    Root: o.elementType
+  }),
+  /**
+   * The props used for each slot inside the Popper.
+   *
+   * @deprecated use the `slotProps` prop instead. This prop will be removed in a future major release. [How to migrate](/material-ui/migration/migrating-from-deprecated-apis/).
+   * @default {}
+   */
+  componentsProps: o.shape({
+    root: o.oneOfType([o.func, o.object])
+  }),
+  /**
+   * An HTML element or function that returns one.
+   * The `container` will have the portal children appended to it.
+   *
+   * You can also provide a callback, which is called in a React layout effect.
+   * This lets you set the container from a ref, and also makes server-side rendering possible.
+   *
+   * By default, it uses the body of the top-level document object,
+   * so it's simply `document.body` most of the time.
+   */
+  container: o.oneOfType([e, o.func]),
+  /**
+   * The `children` will be under the DOM hierarchy of the parent component.
+   * @default false
+   */
+  disablePortal: o.bool,
+  /**
+   * Always keep the children in the DOM.
+   * This prop can be useful in SEO situation or
+   * when you want to maximize the responsiveness of the Popper.
+   * @default false
+   */
+  keepMounted: o.bool,
+  /**
+   * Popper.js is based on a "plugin-like" architecture,
+   * most of its features are fully encapsulated "modifiers".
+   *
+   * A modifier is a function that is called each time Popper.js needs to
+   * compute the position of the popper.
+   * For this reason, modifiers should be very performant to avoid bottlenecks.
+   * To learn how to create a modifier, [read the modifiers documentation](https://popper.js.org/docs/v2/modifiers/).
+   */
+  modifiers: o.arrayOf(o.shape({
+    data: o.object,
+    effect: o.func,
+    enabled: o.bool,
+    fn: o.func,
+    name: o.any,
+    options: o.object,
+    phase: o.oneOf(["afterMain", "afterRead", "afterWrite", "beforeMain", "beforeRead", "beforeWrite", "main", "read", "write"]),
+    requires: o.arrayOf(o.string),
+    requiresIfExists: o.arrayOf(o.string)
+  })),
+  /**
+   * If `true`, the component is shown.
+   */
+  open: o.bool.isRequired,
+  /**
+   * Popper placement.
+   * @default 'bottom'
+   */
+  placement: o.oneOf(["auto-end", "auto-start", "auto", "bottom-end", "bottom-start", "bottom", "left-end", "left-start", "left", "right-end", "right-start", "right", "top-end", "top-start", "top"]),
+  /**
+   * Options provided to the [`Popper.js`](https://popper.js.org/docs/v2/constructors/#options) instance.
+   * @default {}
+   */
+  popperOptions: o.shape({
+    modifiers: o.array,
+    onFirstUpdate: o.func,
+    placement: o.oneOf(["auto-end", "auto-start", "auto", "bottom-end", "bottom-start", "bottom", "left-end", "left-start", "left", "right-end", "right-start", "right", "top-end", "top-start", "top"]),
+    strategy: o.oneOf(["absolute", "fixed"])
+  }),
+  /**
+   * A ref that points to the used popper instance.
+   */
+  popperRef: w,
+  /**
+   * The props used for each slot inside the Popper.
+   * @default {}
+   */
+  slotProps: o.shape({
+    root: o.oneOfType([o.func, o.object])
+  }),
+  /**
+   * The components used for each slot inside the Popper.
+   * Either a string to use a HTML element or a component.
+   * @default {}
+   */
+  slots: o.shape({
+    root: o.elementType
+  }),
+  /**
+   * The system prop that allows defining system overrides as well as additional CSS styles.
+   */
+  sx: o.oneOfType([o.arrayOf(o.oneOfType([o.func, o.object, o.bool])), o.func, o.object]),
+  /**
+   * Help supporting a react-transition-group/Transition component.
+   * @default false
+   */
+  transition: o.bool
+});
 export {
-  r as default,
-  l as getTooltipUtilityClass
+  N as default
 };
 //# sourceMappingURL=ui-components.es183.js.map

package/dist/ui-components.es183.js.map

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