@weng-lab/ui-components 2.2.4 → 3.0.0-beta.0

package/dist/ui-components.es3.js.map

@@ -1 +1 @@
-{"version":3,"file":"ui-components.es3.js","sources":["../src/components/GenomeSearch/GenomeSearch.tsx"],"sourcesContent":["import React, { useCallback, useEffect, useMemo, useState } from \"react\";\nimport {\n  isDomain,\n} from \"./utils\";\nimport { AutocompleteProps, Box, Button, ButtonProps, TextField, TextFieldProps, Typography } from \"@mui/material\";\nimport { Autocomplete } from \"@mui/material\";\nimport { GenomeSearchProps, Result } from \"./types\";\nimport { useEntityAutocomplete } from \"./useEntityAutocomplete\";\n\nconst defaultLimit = 3\n\n/**\n * An autocomplete search component for genomic landmarks such as genes, SNPs, ICRs, and CCRs.\n * The props extends the MUI Autocomplete props, so you are able to adjust that component's props as well.\n * You can also use the slots and slotProps to customize the search's internal components, such as the input, button and the bounding box.\n * To use, pass in a list of the queries you want to run, and the assembly i.e. GRCh38 or mm10.\n * You must also provide a function to call when a result is selected, which will run when the user clicks the button.\n * @param props - extends MUI AutocompleteProps and includes additional props specific to this component\n */\nconst Search: React.FC<GenomeSearchProps> = ({\n  queries,\n  assembly,\n  showiCREFlag,\n  geneVersion,\n  geneLimit = defaultLimit,\n  snpLimit = defaultLimit,\n  icreLimit = defaultLimit,\n  ccreLimit = defaultLimit,\n  legacyCcreLimit = defaultLimit,\n  studyLimit = defaultLimit,\n  onSearchSubmit,\n  defaultResults = [],\n  style,\n  sx,\n  slots,\n  slotProps,\n  ...autocompleteProps\n}) => {\n  const [inputValue, setInputValue] = useState(\"\");\n  const [selection, setSelection] = useState<Result | null>(null);\n\n  const { data, loading } = useEntityAutocomplete(\n    inputValue && inputValue !== \"\" ? [inputValue] : [],\n    {\n      queries,\n      assembly,\n      geneVersion,\n      limits: {\n        gene: geneLimit,\n        snp: snpLimit,\n        icre: icreLimit,\n        ccre: ccreLimit,\n        legacyCcre: legacyCcreLimit,\n        study: studyLimit,\n      },\n      showiCREFlag,\n      debounceMs: 100,\n    }\n  );\n\n  const orderedResults = useMemo(() => {\n    const queryOrder = new Map(queries.map((query, index) => [query, index]));\n\n    const sortByQueryOrder = (results: Result[]) =>\n      [...results].sort((a, b) => {\n        const aIndex = queryOrder.get(a.type);\n        const bIndex = queryOrder.get(b.type);\n\n        if (aIndex === undefined && bIndex === undefined) {\n          return (a.title || \"\").localeCompare(b.title || \"\");\n        }\n\n        if (aIndex === undefined) return 1;\n        if (bIndex === undefined) return -1;\n\n        if (aIndex !== bIndex) return aIndex - bIndex;\n\n        return (a.title || \"\").localeCompare(b.title || \"\");\n      });\n\n    return {\n      data: data ? sortByQueryOrder(data) : data,\n      defaultResults: sortByQueryOrder(defaultResults),\n    };\n  }, [data, defaultResults, queries]);\n\n  //Clear input on assembly change\n  useEffect(() => {\n    setInputValue(\"\");\n    setSelection(null);\n  }, [assembly]);\n\n  // Handle submit\n  const onSubmit = useCallback(() => {\n    if (selection && onSearchSubmit) onSearchSubmit(selection);\n  }, [onSearchSubmit, selection]);\n\n  // Handle enter key down\n  const handleKeyDown = useCallback(\n    (event: React.KeyboardEvent) => {\n      if (event.key === \"Enter\") {\n        const exactMatch = data?.find((x) => x.title?.toLowerCase() === inputValue.toLowerCase());\n        if (exactMatch) {\n          setSelection(exactMatch);\n          if (onSearchSubmit) onSearchSubmit(exactMatch);\n        }\n      }\n    },\n    [data, setSelection, onSearchSubmit]\n  );\n\n  const onChange = (_event: React.SyntheticEvent<Element, Event>, newValue: Result) => {\n    setSelection(newValue);\n    setInputValue(newValue?.title || \"\"); //needed so that the matching to inputValue works on enter press after selection\n  };\n\n  return (\n    <Box display=\"flex\" flexDirection=\"row\" gap={2} style={{ ...style }} sx={{ ...sx }} {...slotProps?.box}>\n      <Autocomplete\n        onChange={onChange}\n        value={selection as Result}\n        options={inputValue === \"\" ? orderedResults.defaultResults : loading || !orderedResults.data ? [] : orderedResults.data}\n        getOptionLabel={(option: Result) => {\n          return option.title || \"\";\n        }}\n        groupBy={(option: Result) => option.type || \"\"}\n        renderGroup={(params) => renderGroup(params, inputValue)}\n        noOptionsText={noOptionsText(inputValue, loading, data)}\n        isOptionEqualToValue={(option, value) => option.title === value.title}\n        renderOption={renderOptions}\n        filterOptions={(x) => x}\n        renderInput={(params) => {\n          if (slots && slots.input) {\n            return React.cloneElement(slots.input as React.ReactElement<TextFieldProps>, {\n              ...params,\n              onKeyDown: handleKeyDown,\n              value: inputValue,\n              onChange: (event: React.ChangeEvent<HTMLInputElement>) => setInputValue(event.target.value),\n            });\n          }\n          return (\n            <TextField\n              {...params}\n              label=\"Search\"\n              onKeyDown={handleKeyDown}\n              value={inputValue}\n              onChange={(event: React.ChangeEvent<HTMLInputElement>) => setInputValue(event.target.value)}\n              {...slotProps?.input}\n            />\n          );\n        }}\n        style={style}\n        sx={sx}\n        {...(autocompleteProps as Partial<AutocompleteProps<Result, false, true, false, React.ElementType>>)}\n      />\n      {/* Submit Button */}\n      {slots && slots.button ? (\n        React.cloneElement(slots.button as React.ReactElement<ButtonProps, string | React.JSXElementConstructor<any>>, {\n          onClick: () => onSubmit(),\n        })\n      ) : (\n        <Button variant=\"contained\" onClick={() => onSubmit()} {...slotProps?.button}>\n          {slotProps?.button?.children || \"Go\"}\n        </Button>\n      )}\n    </Box>\n  );\n};\n\n/**\n * Renders the group of options. Orders the options by relevance to the input value.\n * @param params - The params object from the Autocomplete component\n * @param inputValue - The current input value\n * @returns A rendered group of options\n */\nfunction renderGroup(params: any, inputValue: string) {\n  // Sort items within each group by title match relevance\n  const sortedOptions =\n    Array.isArray(params.children) && !isDomain(inputValue)\n      ? params.children.sort((a: any, b: any) => {\n          const aTitle = (a.props?.children?.props?.children?.[0]?.props?.children || \"\").toLowerCase();\n          const bTitle = (b.props?.children?.props?.children?.[0]?.props?.children || \"\").toLowerCase();\n          const query = inputValue.toLowerCase();\n          // Exact matches first\n          if (aTitle === query && bTitle !== query) return -1;\n          if (bTitle === query && aTitle !== query) return 1;\n\n          // Starts with query second\n          if (aTitle.startsWith(query) && !bTitle.startsWith(query)) return -1;\n          if (bTitle.startsWith(query) && !aTitle.startsWith(query)) return 1;\n\n          // Contains query third\n          if (aTitle.includes(query) && !bTitle.includes(query)) return -1;\n          if (bTitle.includes(query) && !aTitle.includes(query)) return 1;\n\n          // Alphabetical order for equal relevance\n          return aTitle.localeCompare(bTitle);\n        })\n      : params.children;\n\n  return (\n    <div key={params.key}>\n      <Typography variant=\"subtitle2\" sx={{ color: \"gray\", paddingInline: 1.5, paddingBlock: 1 }}>\n        {params.group}\n      </Typography>\n      {sortedOptions}\n    </div>\n  );\n}\n\n/**\n * Renders the \"no options\" text.\n * @param inputValue - The current input value\n * @param isLoading - Whether the results are still loading\n * @param results - The results from the query\n * @returns A rendered \"no options\" text\n */\nfunction noOptionsText(inputValue: string, isLoading: boolean, data: Result[] | null) {\n  return (\n    <Typography variant=\"caption\">\n      {inputValue\n        ? isLoading\n          ? \"Loading...\"\n          : Array.isArray(data) && data.length === 0\n            ? \"No results found\"\n            : \"\"\n        : \"Start typing for options\"}\n    </Typography>\n  );\n}\n\n/**\n * Renders the individual options.\n * @param props - The props object from the Autocomplete component\n * @param option - The current option\n * @returns A rendered option\n */\nfunction renderOptions(props: any, option: Result) {\n  return (\n    <li {...props} key={`${option.type}-${option.title || \"untitled\"}-${option.description || \"no-description\"}`}>\n      <Box>\n        <Typography\n          variant=\"body1\"\n          component=\"div\"\n          fontWeight=\"bold\"\n          sx={option.type === \"Gene\" ? { fontStyle: \"italic\" } : {}}\n        >\n          {option.title}\n        </Typography>\n        <Typography variant=\"body2\" 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+{"version":3,"file":"ui-components.es3.js","sources":["../src/components/GenomeSearch/GenomeSearch.tsx"],"sourcesContent":["import React, { useCallback, useEffect, useMemo, useState } from \"react\";\nimport { isDomain } from \"./utils\";\nimport {\n  AutocompleteRenderGroupParams,\n  Box,\n  Button,\n  TextField,\n  Typography,\n} from \"@mui/material\";\nimport { Autocomplete } from \"@mui/material\";\nimport { GenomeSearchProps, Result } from \"./types\";\nimport { useEntityAutocomplete } from \"./useEntityAutocomplete\";\n\n/**\n * An autocomplete search component for genomic landmarks such as genes, SNPs, ICRs, and CCRs.\n * The props extends the MUI Autocomplete props, so you are able to adjust that component's props as well.\n * You can also use the slots and slotProps to customize the search's internal components, such as the input, button and the bounding box.\n * To use, pass in a list of the queries you want to run, and the assembly i.e. GRCh38 or mm10.\n * You must also provide a function to call when a result is selected, which will run when the user clicks the button.\n * @param props - extends MUI AutocompleteProps and includes additional props specific to this component\n */\nfunction GenomeSearch({\n  queries,\n  assembly,\n  showiCREFlag,\n  geneVersion,\n  limit,\n  graphqlUrl,\n  onSearchSubmit,\n  defaultResults = [],\n  style,\n  sx,\n  slots,\n  slotProps,\n  ...autocompleteProps\n}: GenomeSearchProps) {\n  const [inputValue, setInputValue] = useState(\"\");\n  const [selection, setSelection] = useState<Result | null>(null);\n\n  const {\n    input: inputSlot,\n    button: buttonSlot,\n    box: boxSlot,\n    ...muiSlots\n  } = slots ?? {};\n\n  const {\n    input: inputSlotProps,\n    button: buttonSlotProps,\n    box: boxSlotProps,\n    ...muiSlotProps\n  } = slotProps ?? {};\n\n  const InputSlot = inputSlot ?? TextField;\n  const ButtonSlot = buttonSlot ?? Button;\n  const BoxSlot = boxSlot ?? Box;\n\n  const { data, loading } = useEntityAutocomplete(\n    inputValue ? [inputValue] : [],\n    {\n      queries,\n      assembly,\n      geneVersion,\n      limit,\n      showiCREFlag,\n      debounceMs: 100,\n      graphqlUrl,\n    }\n  );\n\n  const orderedResults = useMemo(() => {\n    const queryOrder = new Map(queries.map((query, index) => [query, index]));\n    const query = inputValue.toLowerCase();\n    const skipRelevance = isDomain(inputValue);\n\n    const relevanceRank = (title: string) => {\n      if (skipRelevance || !query) return 3;\n      if (title === query) return 0;\n      if (title.startsWith(query)) return 1;\n      if (title.includes(query)) return 2;\n      return 3;\n    };\n\n    const sortByQueryOrder = (results: Result[]) =>\n      [...results].sort((a, b) => {\n        const aIndex = queryOrder.get(a.type);\n        const bIndex = queryOrder.get(b.type);\n\n        // 1. 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