@weng-lab/genomebrowser 1.8.2 → 1.8.3

package/dist/api/fetchers.d.ts

@@ -3,6 +3,7 @@ import { Track } from '../store/trackStore';
 import { TrackType } from '../components/tracks/types';
 import { Domain } from '../utils/types';
 import { TrackDataState } from '../store/dataStore';
+import { BigBedParser } from './getBigWigData';
 export interface QueryHooks {
     fetchBigData: LazyQueryExecFunction<any, OperationVariables>;
     fetchGene: LazyQueryExecFunction<any, OperationVariables>;
@@ -17,12 +18,12 @@ export type FetcherContext<T extends Track = Track> = {
     queries: QueryHooks;
 };
 export type FetchFunction = (ctx: FetcherContext) => Promise<TrackDataState>;
-export declare function getBigDataRace(url: string, expandedDomain: Domain, preRenderedWidth: number, queries: QueryHooks): Promise<TrackDataState>;
+export declare function getBigDataRace(url: string, expandedDomain: Domain, preRenderedWidth: number, _queries: QueryHooks, parser?: BigBedParser): Promise<TrackDataState>;
 /**
  * Fetch a BigBed/BigWig URL using the fetcher context.
  * Useful for custom track fetchers that need to load .bb/.bw files.
  */
-export declare function fetchBigBedUrl(url: string, ctx: FetcherContext): Promise<TrackDataState>;
+export declare function fetchBigBedUrl(url: string, ctx: FetcherContext, parser?: BigBedParser): Promise<TrackDataState>;
 /**
  * Registry of fetcher functions by track type
  */

package/dist/api/getBigWigData.d.ts

@@ -1,7 +1,8 @@
-import { BigZoomData } from 'bigwig-reader';
+import { BigZoomData } from 'genomic-reader';
 import { TrackDataState } from '../store/dataStore';
 import { Domain } from '../utils/types';
-export declare function getBigData(url: string, expandedDomain: Domain, preRenderedWidth?: number): Promise<TrackDataState>;
+export type BigBedParser = (chrom: string, startBase: number, endBase: number, rest: string) => any;
+export declare function getBigData(url: string, expandedDomain: Domain, preRenderedWidth?: number, parser?: BigBedParser): Promise<TrackDataState>;
 export declare function condensedZoomData(data: BigZoomData[], preRenderedWidth: number, start: number, end: number): Promise<any[]>;
 export declare function ogBigDataFetcher(url: string, expandedDomain: Domain, preRenderedWidth: number, queries: any): Promise<TrackDataState>;
 export declare function applyFillWithZero(data: {

package/dist/components/tracks/methylC/defaultMethylCTooltip.d.ts

@@ -1,4 +1,15 @@
 import { ValuedPoint } from '../bigwig/types';
-export default function DefaultMethylCTooltip({ tooltipValues }: {
+export type MethylCShowRows = {
+    fwdCpg: boolean;
+    fwdChg: boolean;
+    fwdChh: boolean;
+    fwdDepth: boolean;
+    revCpg: boolean;
+    revChg: boolean;
+    revChh: boolean;
+    revDepth: boolean;
+};
+export default function DefaultMethylCTooltip({ tooltipValues, showRows, }: {
     tooltipValues: ValuedPoint[];
+    showRows: MethylCShowRows;
 }): import("react/jsx-runtime").JSX.Element;

package/dist/components/tracks/methylC/split.d.ts

@@ -1,3 +1,3 @@
-import { MethylCProps } from './types';
-declare function SplitMethylC({ id, height, colors, data, dimensions, range, tooltip }: MethylCProps): import("react/jsx-runtime").JSX.Element;
+import { MethylCProps, MethylCConfig } from './types';
+declare function SplitMethylC({ id, height, colors, data, dimensions, range, tooltip, urls, }: MethylCProps & Pick<MethylCConfig, "urls">): import("react/jsx-runtime").JSX.Element;
 export default SplitMethylC;