@weng-lab/genomebrowser-ui 0.4.0 → 0.4.2
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- package/dist/TrackSelect/Folders/biosamples/data/{human_with_wgbs.json.d.ts → humans_fixed.json.d.ts} +511 -511
- package/dist/TrackSelect/Folders/biosamples/shared/types.d.ts +1 -1
- package/dist/TrackSelect/Folders/index.d.ts +2 -0
- package/dist/TrackSelect/Folders/psychscreen/data/human.json.d.ts +815 -0
- package/dist/TrackSelect/Folders/psychscreen/human.d.ts +1 -0
- package/dist/TrackSelect/Folders/psychscreen/shared/PsychscreenGroupingCell.d.ts +2 -0
- package/dist/TrackSelect/Folders/psychscreen/shared/columns.d.ts +7 -0
- package/dist/TrackSelect/Folders/psychscreen/shared/createFolder.d.ts +9 -0
- package/dist/TrackSelect/Folders/psychscreen/shared/toTrack.d.ts +5 -0
- package/dist/TrackSelect/Folders/psychscreen/shared/types.d.ts +12 -0
- package/dist/TrackSelect/trackContext.d.ts +2 -1
- package/dist/TrackSelect/types.d.ts +1 -1
- package/dist/genomebrowser-ui.es.js +1814 -1625
- package/dist/genomebrowser-ui.es.js.map +1 -1
- package/package.json +2 -2
- package/src/TrackSelect/DataGrid/DataGridWrapper.tsx +99 -11
- package/src/TrackSelect/Folders/biosamples/data/fix-human-collections.mjs +119 -0
- package/src/TrackSelect/Folders/biosamples/data/humans_fixed.json +59909 -0
- package/src/TrackSelect/Folders/biosamples/human.ts +1 -1
- package/src/TrackSelect/Folders/biosamples/shared/columns.tsx +2 -2
- package/src/TrackSelect/Folders/biosamples/shared/types.ts +1 -1
- package/src/TrackSelect/Folders/index.ts +4 -0
- package/src/TrackSelect/Folders/psychscreen/data/human.json +812 -0
- package/src/TrackSelect/Folders/psychscreen/human.ts +10 -0
- package/src/TrackSelect/Folders/psychscreen/shared/PsychscreenGroupingCell.tsx +78 -0
- package/src/TrackSelect/Folders/psychscreen/shared/columns.tsx +52 -0
- package/src/TrackSelect/Folders/psychscreen/shared/createFolder.ts +45 -0
- package/src/TrackSelect/Folders/psychscreen/shared/toTrack.ts +48 -0
- package/src/TrackSelect/Folders/psychscreen/shared/types.ts +14 -0
- package/src/TrackSelect/TreeView/CustomTreeItem.tsx +10 -2
- package/src/TrackSelect/TreeView/TreeViewWrapper.tsx +4 -1
- package/src/TrackSelect/trackContext.ts +2 -0
- package/src/TrackSelect/types.ts +1 -1
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export declare const humanPsychscreenFolder: import('..').FolderDefinition<import('..').PsychscreenTrackInfo>;
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import { GridColDef } from '@mui/x-data-grid-premium';
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import { PsychscreenTrackInfo } from './types';
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export declare const psychscreenCategoryColors: Record<string, string>;
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export declare function getPsychscreenCategoryColor(category: string): string;
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export declare const defaultColumns: GridColDef<PsychscreenTrackInfo>[];
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export declare const defaultGroupingModel: string[];
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export declare const defaultLeafField = "title";
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import { FolderDefinition } from '../../types';
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import { PsychscreenDataFile, PsychscreenTrackInfo } from './types';
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export interface CreatePsychscreenFolderOptions {
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id: string;
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label: string;
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description?: string;
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data: PsychscreenDataFile;
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}
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export declare function createPsychscreenFolder(options: CreatePsychscreenFolderOptions): FolderDefinition<PsychscreenTrackInfo>;
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import { Track } from '@weng-lab/genomebrowser';
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import { CreateTrackOptions } from '../../types';
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import { PsychscreenTrackInfo } from './types';
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export type PsychscreenTrackContext = {};
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export declare function createPsychscreenTrack(row: PsychscreenTrackInfo, _options: CreateTrackOptions): Track;
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export type PsychscreenTrackType = "bigwig" | "bigbed";
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export type PsychscreenTrackInfo = {
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id: string;
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sourceId?: string;
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category: string;
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subcategory: string;
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title: string;
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url: string;
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trackType: PsychscreenTrackType;
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color?: string;
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};
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export type PsychscreenDataFile = PsychscreenTrackInfo[];
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@@ -2,4 +2,5 @@ import { BiosampleTrackContext } from './Folders/biosamples/shared/toTrack';
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import { GeneTrackContext } from './Folders/genes/shared/toTrack';
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import { MohdTrackContext } from './Folders/mohd/shared/toTrack';
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import { OtherTracksTrackContext } from './Folders/other-tracks/shared/toTrack';
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import { PsychscreenTrackContext } from './Folders/psychscreen/shared/toTrack';
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export type TrackSelectTrackContext = GeneTrackContext & BiosampleTrackContext & MohdTrackContext & PsychscreenTrackContext & OtherTracksTrackContext;
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@@ -39,7 +39,7 @@ export interface CustomLabelProps {
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icon?: React.ElementType | React.ReactElement | ReactNode;
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renderIcon?: (name: string) => ReactNode;
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}
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export interface CustomTreeItemProps extends Omit<UseTreeItemParameters, "rootRef">, Omit<React.HTMLAttributes<HTMLLIElement>, "onFocus"> {
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export interface CustomTreeItemProps extends Omit<UseTreeItemParameters, "rootRef">, Omit<React.HTMLAttributes<HTMLLIElement>, "children" | "onFocus"> {
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onRemove?: (item: TreeViewBaseItem<ExtendedTreeItemProps>) => void;
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renderIcon?: (name: string) => ReactNode;
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}
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