@weng-lab/genomebrowser-ui 0.3.6 → 0.4.0-beta.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.env.local +1 -1
- package/dist/TrackSelect/Folders/biosamples/shared/BiosampleViewSelector.d.ts +7 -0
- package/dist/TrackSelect/Folders/biosamples/shared/createFolder.d.ts +1 -13
- package/dist/TrackSelect/Folders/biosamples/shared/toTrack.d.ts +20 -0
- package/dist/TrackSelect/Folders/biosamples/shared/types.d.ts +4 -13
- package/dist/TrackSelect/Folders/genes/shared/columns.d.ts +2 -2
- package/dist/TrackSelect/Folders/genes/shared/createFolder.d.ts +1 -3
- package/dist/TrackSelect/Folders/genes/shared/toTrack.d.ts +18 -0
- package/dist/TrackSelect/Folders/genes/shared/types.d.ts +2 -0
- package/dist/TrackSelect/Folders/index.d.ts +6 -12
- package/dist/TrackSelect/Folders/mohd/data/human.json.d.ts +2948 -0
- package/dist/TrackSelect/Folders/mohd/human.d.ts +1 -0
- package/dist/TrackSelect/Folders/mohd/shared/MohdGroupingCell.d.ts +2 -0
- package/dist/TrackSelect/Folders/mohd/shared/MohdTreeItem.d.ts +3 -0
- package/dist/TrackSelect/Folders/mohd/shared/MohdViewSelector.d.ts +7 -0
- package/dist/TrackSelect/Folders/mohd/shared/columns.d.ts +5 -0
- package/dist/TrackSelect/Folders/mohd/shared/config.d.ts +42 -0
- package/dist/TrackSelect/Folders/mohd/shared/createFolder.d.ts +9 -0
- package/dist/TrackSelect/Folders/mohd/shared/toTrack.d.ts +9 -0
- package/dist/TrackSelect/Folders/mohd/shared/types.d.ts +40 -0
- package/dist/TrackSelect/Folders/other-tracks/shared/toTrack.d.ts +5 -0
- package/dist/TrackSelect/Folders/other-tracks/shared/types.d.ts +1 -0
- package/dist/TrackSelect/Folders/types.d.ts +23 -55
- package/dist/TrackSelect/TrackSelect.d.ts +10 -7
- package/dist/TrackSelect/TreeView/TreeViewWrapper.d.ts +1 -1
- package/dist/TrackSelect/buildSelectedTree.d.ts +15 -0
- package/dist/TrackSelect/managedTracks.d.ts +13 -0
- package/dist/TrackSelect/resolveFolderView.d.ts +2 -0
- package/dist/TrackSelect/trackContext.d.ts +5 -0
- package/dist/TrackSelect/types.d.ts +12 -33
- package/dist/genomebrowser-ui.es.js +2231 -1732
- package/dist/genomebrowser-ui.es.js.map +1 -1
- package/dist/lib.d.ts +4 -4
- package/dist/muiLicense.d.ts +1 -0
- package/package.json +6 -3
- package/src/TrackSelect/Dialogs/ClearDialog.tsx +3 -8
- package/src/TrackSelect/Dialogs/ResetDialog.tsx +5 -4
- package/src/TrackSelect/FolderList/FolderCard.tsx +1 -1
- package/src/TrackSelect/Folders/biosamples/shared/BiosampleViewSelector.tsx +33 -0
- package/src/TrackSelect/Folders/biosamples/shared/createFolder.ts +39 -58
- package/src/TrackSelect/Folders/biosamples/shared/toTrack.ts +138 -0
- package/src/TrackSelect/Folders/biosamples/shared/types.ts +4 -16
- package/src/TrackSelect/Folders/genes/shared/columns.tsx +2 -2
- package/src/TrackSelect/Folders/genes/shared/createFolder.ts +11 -31
- package/src/TrackSelect/Folders/genes/shared/toTrack.ts +59 -0
- package/src/TrackSelect/Folders/genes/shared/types.ts +2 -0
- package/src/TrackSelect/Folders/index.ts +14 -17
- package/src/TrackSelect/Folders/mohd/data/human.json +2945 -0
- package/src/TrackSelect/Folders/mohd/human.ts +10 -0
- package/src/TrackSelect/Folders/mohd/shared/MohdGroupingCell.tsx +68 -0
- package/src/TrackSelect/Folders/mohd/shared/MohdTreeItem.tsx +17 -0
- package/src/TrackSelect/Folders/mohd/shared/MohdViewSelector.tsx +33 -0
- package/src/TrackSelect/Folders/mohd/shared/columns.tsx +79 -0
- package/src/TrackSelect/Folders/mohd/shared/config.tsx +71 -0
- package/src/TrackSelect/Folders/mohd/shared/createFolder.ts +144 -0
- package/src/TrackSelect/Folders/mohd/shared/toTrack.ts +164 -0
- package/src/TrackSelect/Folders/mohd/shared/types.ts +46 -0
- package/src/TrackSelect/Folders/other-tracks/shared/createFolder.ts +13 -14
- package/src/TrackSelect/Folders/other-tracks/shared/toTrack.ts +17 -0
- package/src/TrackSelect/Folders/other-tracks/shared/types.ts +1 -0
- package/src/TrackSelect/Folders/types.ts +26 -69
- package/src/TrackSelect/TrackSelect.tsx +301 -257
- package/src/TrackSelect/TreeView/CustomTreeItem.tsx +9 -9
- package/src/TrackSelect/TreeView/TreeViewWrapper.tsx +84 -6
- package/src/TrackSelect/buildSelectedTree.ts +145 -0
- package/src/TrackSelect/managedTracks.ts +92 -0
- package/src/TrackSelect/resolveFolderView.ts +20 -0
- package/src/TrackSelect/trackContext.ts +9 -0
- package/src/TrackSelect/types.ts +14 -39
- package/src/lib.ts +13 -7
- package/src/muiLicense.ts +9 -0
- package/src/vite-env.d.ts +9 -0
- package/test/TrackSelect.test.tsx +435 -0
- package/test/main.tsx +36 -352
- package/test/mocks/logo-test.tsx +11 -0
- package/test/mohdDisplay.test.tsx +45 -0
- package/test/startup.test.ts +206 -0
- package/test/trackSelectState.test.ts +176 -0
- package/vite.config.ts +1 -0
- package/vitest.config.ts +20 -0
- package/dist/TrackSelect/Folders/biosamples/shared/AssayToggle.d.ts +0 -18
- package/dist/TrackSelect/Folders/biosamples/shared/treeBuilder.d.ts +0 -28
- package/dist/TrackSelect/Folders/genes/shared/treeBuilder.d.ts +0 -13
- package/dist/TrackSelect/Folders/other-tracks/shared/treeBuilder.d.ts +0 -4
- package/dist/TrackSelect/store.d.ts +0 -4
- package/src/TrackSelect/Folders/NEW.md +0 -929
- package/src/TrackSelect/Folders/biosamples/shared/AssayToggle.tsx +0 -78
- package/src/TrackSelect/Folders/biosamples/shared/treeBuilder.ts +0 -224
- package/src/TrackSelect/Folders/genes/shared/treeBuilder.ts +0 -45
- package/src/TrackSelect/Folders/other-tracks/shared/treeBuilder.ts +0 -34
- package/src/TrackSelect/store.ts +0 -117
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@@ -4,29 +4,26 @@ import { mouseBiosamplesFolder } from "./biosamples/mouse";
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import { humanGenesFolder } from "./genes/human";
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import { mouseGenesFolder } from "./genes/mouse";
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import { humanOtherTracksFolder } from "./other-tracks/human";
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import { humanMohdFolder } from "./mohd/human";
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export {
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type Assembly,
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type FolderDefinition,
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type FolderRuntimeConfig,
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} from "./types";
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export { type Assembly, type FolderDefinition, type FolderView } from "./types";
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export type { BiosampleRowInfo } from "./biosamples/shared/types";
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export type { BiosampleTrackContext } from "./biosamples/shared/toTrack";
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export type { GeneRowInfo } from "./genes/shared/types";
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export type { GeneTrackContext } from "./genes/shared/toTrack";
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export type { MohdRowInfo } from "./mohd/shared/types";
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export type { MohdTrackContext } from "./mohd/shared/toTrack";
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export type { OtherTrackInfo } from "./other-tracks/shared/types";
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export type { OtherTracksTrackContext } from "./other-tracks/shared/toTrack";
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* Registry of folders available for each assembly.
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*
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* Each assembly can have multiple folders (e.g., biosamples, genes, etc.).
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* TrackSelect receives the folders for the current assembly and renders
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* them as tabs or a folder selector.
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*
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* To add a new folder:
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* 1. Create a folder config file (e.g., folders/genes/human.ts)
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* 2. Import and add it to the appropriate assembly array below
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*/
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// Registry of folders by assembly
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export const foldersByAssembly: Record<Assembly, FolderDefinition[]> = {
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GRCh38: [
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GRCh38: [
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humanGenesFolder,
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humanBiosamplesFolder,
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humanMohdFolder,
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humanOtherTracksFolder,
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],
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mm10: [mouseGenesFolder, mouseBiosamplesFolder],
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};
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