@wemush/wols 0.1.0

package/dist/cjs/utils/cuid.js

@@ -0,0 +1,150 @@
+"use strict";
+/**
+ * CUID2 Generator - Zero-dependency implementation
+ *
+ * Generates collision-resistant unique identifiers following the CUID2 algorithm.
+ * This is a minimal implementation focused on the needs of WOLS specimen IDs.
+ *
+ * @module utils/cuid
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.createId = createId;
+exports.createSpecimenId = createSpecimenId;
+exports.isValidSpecimenId = isValidSpecimenId;
+// Character set for base36 encoding (0-9, a-z)
+const ALPHABET = '0123456789abcdefghijklmnopqrstuvwxyz';
+// Default length for generated IDs
+const DEFAULT_LENGTH = 24;
+// Counter for additional entropy
+let counter = 0;
+/**
+ * Get cryptographically secure random bytes.
+ * Uses Web Crypto API (works in Node.js 18+ and modern browsers).
+ */
+function getRandomBytes(length) {
+    const bytes = new Uint8Array(length);
+    // Use globalThis.crypto for cross-platform compatibility
+    const cryptoObj = typeof globalThis !== 'undefined'
+        ? globalThis.crypto
+        : undefined;
+    if (cryptoObj?.getRandomValues) {
+        cryptoObj.getRandomValues(bytes);
+    }
+    else {
+        // Fallback for older environments (should not happen with Node 18+)
+        for (let i = 0; i < length; i++) {
+            bytes[i] = Math.floor(Math.random() * 256);
+        }
+    }
+    return bytes;
+}
+/**
+ * Convert a byte array to a base36 string.
+ */
+function toBase36(bytes) {
+    let result = '';
+    for (const byte of bytes) {
+        result += ALPHABET[byte % 36];
+    }
+    return result;
+}
+/**
+ * Get a timestamp component for the ID.
+ * Uses high-resolution time when available.
+ */
+function getTimestamp() {
+    const now = Date.now();
+    return now.toString(36);
+}
+/**
+ * Get counter component to ensure uniqueness within same millisecond.
+ */
+function getCounter() {
+    counter = (counter + 1) % 1679616; // Max 4 base36 chars
+    return counter.toString(36).padStart(4, '0');
+}
+/**
+ * Generate a fingerprint based on environment.
+ * In browsers, uses navigator info. In Node.js, uses process info.
+ */
+function getFingerprint() {
+    const parts = [];
+    // Node.js environment - use globalThis for cross-platform compatibility
+    const processObj = typeof globalThis !== 'undefined'
+        ? globalThis.process
+        : undefined;
+    const navigatorObj = typeof globalThis !== 'undefined'
+        ? globalThis.navigator
+        : undefined;
+    if (processObj?.pid) {
+        parts.push(processObj.pid.toString(36));
+        const hrtime = processObj.hrtime?.();
+        if (hrtime) {
+            parts.push((hrtime[1] ?? 0).toString(36));
+        }
+    }
+    // Browser environment
+    if (navigatorObj) {
+        parts.push((navigatorObj.userAgent?.length ?? 0).toString(36));
+        parts.push((navigatorObj.language?.length ?? 0).toString(36));
+    }
+    // Fallback random
+    if (parts.length === 0) {
+        const random = getRandomBytes(4);
+        parts.push(toBase36(random));
+    }
+    return parts.join('').slice(0, 4);
+}
+/**
+ * Generate a CUID2-style identifier.
+ *
+ * The ID format is: [random][timestamp][counter][fingerprint][random]
+ * All components are base36 encoded for URL safety.
+ *
+ * @param length - Length of the generated ID (default: 24)
+ * @returns A unique, URL-safe identifier
+ *
+ * @example
+ * ```typescript
+ * const id = createId();
+ * // Returns something like: "clx1a2b3c4d5e6f7g8h9i0j1"
+ * ```
+ */
+function createId(length = DEFAULT_LENGTH) {
+    const timestamp = getTimestamp();
+    const count = getCounter();
+    const fingerprint = getFingerprint();
+    // Calculate random bytes needed
+    const fixedLength = timestamp.length + count.length + fingerprint.length;
+    const randomLength = Math.max(0, length - fixedLength);
+    // Generate random component
+    const randomBytes = getRandomBytes(randomLength);
+    const random = toBase36(randomBytes);
+    // Combine components
+    const id = (random + timestamp + count + fingerprint).slice(0, length);
+    return id;
+}
+/**
+ * Generate a specimen ID with the WOLS prefix.
+ *
+ * @returns A specimen ID in format "wemush:{cuid}"
+ *
+ * @example
+ * ```typescript
+ * const specimenId = createSpecimenId();
+ * // Returns: "wemush:clx1a2b3c4d5e6f7g8h9i0j1"
+ * ```
+ */
+function createSpecimenId() {
+    return `wemush:${createId()}`;
+}
+/**
+ * Validate a specimen ID format.
+ *
+ * @param id - The ID to validate
+ * @returns true if the ID matches the expected format
+ */
+function isValidSpecimenId(id) {
+    return /^wemush:[a-z0-9]+$/.test(id);
+}
+//# sourceMappingURL=cuid.js.map

package/dist/cjs/utils/cuid.js.map

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package/dist/cjs/utils/iso8601.js

@@ -0,0 +1,131 @@
+"use strict";
+/**
+ * ISO 8601 Date Utilities
+ *
+ * Provides parsing and formatting for ISO 8601 date strings
+ * as used in WOLS specimens.
+ *
+ * @module utils/iso8601
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.isValidISO8601 = isValidISO8601;
+exports.isValidDateOnly = isValidDateOnly;
+exports.getCurrentISO8601 = getCurrentISO8601;
+exports.parseISO8601 = parseISO8601;
+exports.formatISO8601 = formatISO8601;
+exports.toUnixTimestamp = toUnixTimestamp;
+exports.fromUnixTimestamp = fromUnixTimestamp;
+/**
+ * Regular expression for validating ISO 8601 date strings.
+ * Matches formats like:
+ * - 2025-12-16T10:30:00Z
+ * - 2025-12-16T10:30:00.000Z
+ * - 2025-12-16T10:30:00+00:00
+ * - 2025-12-16T10:30:00-05:00
+ */
+const ISO8601_REGEX = /^\d{4}-\d{2}-\d{2}T\d{2}:\d{2}:\d{2}(?:\.\d{1,3})?(?:Z|[+-]\d{2}:\d{2})$/;
+/**
+ * Simple date-only regex for partial dates
+ */
+const DATE_ONLY_REGEX = /^\d{4}-\d{2}-\d{2}$/;
+/**
+ * Check if a string is a valid ISO 8601 date.
+ *
+ * @param value - The string to validate
+ * @returns true if valid ISO 8601 format
+ *
+ * @example
+ * ```typescript
+ * isValidISO8601('2025-12-16T10:30:00Z'); // true
+ * isValidISO8601('2025-12-16'); // false (date-only)
+ * isValidISO8601('invalid'); // false
+ * ```
+ */
+function isValidISO8601(value) {
+    if (!ISO8601_REGEX.test(value)) {
+        return false;
+    }
+    // Also verify it's a parseable date
+    const date = new Date(value);
+    return !isNaN(date.getTime());
+}
+/**
+ * Check if a string is a valid date-only format (YYYY-MM-DD).
+ *
+ * @param value - The string to validate
+ * @returns true if valid date-only format
+ */
+function isValidDateOnly(value) {
+    if (!DATE_ONLY_REGEX.test(value)) {
+        return false;
+    }
+    const date = new Date(value + 'T00:00:00Z');
+    return !isNaN(date.getTime());
+}
+/**
+ * Get the current timestamp in ISO 8601 format.
+ *
+ * @returns Current time as ISO 8601 string
+ *
+ * @example
+ * ```typescript
+ * const now = getCurrentISO8601();
+ * // Returns: "2025-12-16T10:30:00.000Z"
+ * ```
+ */
+function getCurrentISO8601() {
+    return new Date().toISOString();
+}
+/**
+ * Parse an ISO 8601 date string to a Date object.
+ *
+ * @param value - The ISO 8601 string to parse
+ * @returns The parsed Date, or null if invalid
+ *
+ * @example
+ * ```typescript
+ * const date = parseISO8601('2025-12-16T10:30:00Z');
+ * // Returns: Date object
+ *
+ * const invalid = parseISO8601('invalid');
+ * // Returns: null
+ * ```
+ */
+function parseISO8601(value) {
+    if (!isValidISO8601(value)) {
+        return null;
+    }
+    return new Date(value);
+}
+/**
+ * Format a Date object to ISO 8601 string.
+ *
+ * @param date - The Date to format
+ * @returns ISO 8601 string
+ */
+function formatISO8601(date) {
+    return date.toISOString();
+}
+/**
+ * Get Unix timestamp (seconds since epoch) from ISO 8601 string.
+ *
+ * @param value - The ISO 8601 string
+ * @returns Unix timestamp in seconds, or null if invalid
+ */
+function toUnixTimestamp(value) {
+    const date = parseISO8601(value);
+    if (!date) {
+        return null;
+    }
+    return Math.floor(date.getTime() / 1000);
+}
+/**
+ * Convert Unix timestamp to ISO 8601 string.
+ *
+ * @param timestamp - Unix timestamp in seconds
+ * @returns ISO 8601 string
+ */
+function fromUnixTimestamp(timestamp) {
+    return new Date(timestamp * 1000).toISOString();
+}
+//# sourceMappingURL=iso8601.js.map

package/dist/cjs/utils/iso8601.js.map

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package/dist/cjs/validator.js

@@ -0,0 +1,307 @@
+"use strict";
+/**
+ * WOLS Specimen Validator
+ *
+ * This module provides validation functionality for WOLS specimen objects.
+ *
+ * @module validator
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.validateSpecimen = validateSpecimen;
+const errors_js_1 = require("./errors.js");
+const types_js_1 = require("./types.js");
+const iso8601_js_1 = require("./utils/iso8601.js");
+// =============================================================================
+// VALIDATION PATTERNS
+// =============================================================================
+/**
+ * Pattern for valid specimen ID: wemush:[a-z0-9]+
+ */
+const SPECIMEN_ID_PATTERN = /^wemush:[a-z0-9]+$/;
+/**
+ * Pattern for valid semver version: major.minor.patch
+ */
+const SEMVER_PATTERN = /^\d+\.\d+\.\d+$/;
+/**
+ * Pattern for valid strain generation: P, F1, F2, F3, etc.
+ */
+const GENERATION_PATTERN = /^(P|F\d+)$/;
+/**
+ * Known WOLS specimen fields (for unknown field detection).
+ */
+const KNOWN_FIELDS = new Set([
+    '@context',
+    '@type',
+    'id',
+    'version',
+    'type',
+    'species',
+    'strain',
+    'stage',
+    'created',
+    'batch',
+    'organization',
+    'creator',
+    'custom',
+    'signature',
+]);
+// =============================================================================
+// HELPER FUNCTIONS
+// =============================================================================
+/**
+ * Create a validation error.
+ */
+function error(path, code, message) {
+    return { path, code, message };
+}
+/**
+ * Create a validation warning.
+ */
+function warning(path, code, message, suggestion) {
+    const result = { path, code, message };
+    if (suggestion !== undefined) {
+        result.suggestion = suggestion;
+    }
+    return result;
+}
+/**
+ * Check if a value is a non-empty string.
+ */
+function isNonEmptyString(value) {
+    return typeof value === 'string' && value.trim().length > 0;
+}
+/**
+ * Check if a value is a plain object.
+ */
+function isPlainObject(value) {
+    return typeof value === 'object' && value !== null && !Array.isArray(value);
+}
+// =============================================================================
+// FIELD VALIDATORS
+// =============================================================================
+/**
+ * Validate @context field.
+ */
+function validateContext(value, errors, _options) {
+    if (value === undefined || value === null) {
+        errors.push(error('@context', errors_js_1.WolsErrorCode.INVALID_CONTEXT, '@context is required'));
+        return;
+    }
+    if (value !== types_js_1.WOLS_CONTEXT) {
+        errors.push(error('@context', errors_js_1.WolsErrorCode.INVALID_CONTEXT, `@context must be '${types_js_1.WOLS_CONTEXT}', got '${value}'`));
+    }
+}
+/**
+ * Validate @type field.
+ */
+function validateType(value, errors, _options) {
+    if (value === undefined || value === null) {
+        errors.push(error('@type', errors_js_1.WolsErrorCode.INVALID_TYPE, '@type is required'));
+        return;
+    }
+    if (value !== 'Specimen') {
+        errors.push(error('@type', errors_js_1.WolsErrorCode.INVALID_TYPE, `@type must be 'Specimen', got '${value}'`));
+    }
+}
+/**
+ * Validate id field.
+ */
+function validateId(value, errors, _options) {
+    if (value === undefined || value === null) {
+        errors.push(error('id', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'id is required'));
+        return;
+    }
+    if (typeof value !== 'string') {
+        errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, 'id must be a string'));
+        return;
+    }
+    if (!SPECIMEN_ID_PATTERN.test(value)) {
+        errors.push(error('id', errors_js_1.WolsErrorCode.INVALID_ID_FORMAT, `id must match pattern 'wemush:[a-z0-9]+', got '${value}'`));
+    }
+}
+/**
+ * Validate version field.
+ */
+function validateVersion(value, errors, _options) {
+    if (value === undefined || value === null) {
+        errors.push(error('version', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'version is required'));
+        return;
+    }
+    if (typeof value !== 'string') {
+        errors.push(error('version', errors_js_1.WolsErrorCode.INVALID_VERSION, 'version must be a string'));
+        return;
+    }
+    if (!SEMVER_PATTERN.test(value)) {
+        errors.push(error('version', errors_js_1.WolsErrorCode.INVALID_VERSION, `version must be valid semver (major.minor.patch), got '${value}'`));
+    }
+}
+/**
+ * Validate specimen type field.
+ */
+function validateSpecimenType(value, errors, _options) {
+    if (value === undefined || value === null) {
+        errors.push(error('type', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'type is required'));
+        return;
+    }
+    if (!(0, types_js_1.isSpecimenType)(value)) {
+        errors.push(error('type', errors_js_1.WolsErrorCode.INVALID_SPECIMEN_TYPE, `type must be one of CULTURE, SPAWN, SUBSTRATE, FRUITING, HARVEST, got '${value}'`));
+    }
+}
+/**
+ * Validate species field.
+ */
+function validateSpecies(value, errors, _options) {
+    if (value === undefined || value === null) {
+        errors.push(error('species', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'species is required'));
+        return;
+    }
+    if (!isNonEmptyString(value)) {
+        errors.push(error('species', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'species must be a non-empty string'));
+    }
+}
+/**
+ * Validate optional stage field.
+ */
+function validateStage(value, errors, warnings, options) {
+    if (value === undefined || value === null) {
+        return; // Optional field
+    }
+    if (!(0, types_js_1.isGrowthStage)(value)) {
+        if (options.level === 'lenient') {
+            warnings.push(warning('stage', 'UNKNOWN_GROWTH_STAGE', `Unknown growth stage '${value}'`, 'Use one of: INOCULATION, COLONIZATION, FRUITING, HARVEST'));
+        }
+        else {
+            errors.push(error('stage', 'INVALID_GROWTH_STAGE', `stage must be one of INOCULATION, COLONIZATION, FRUITING, HARVEST, got '${value}'`));
+        }
+    }
+}
+/**
+ * Validate optional created field.
+ */
+function validateCreated(value, errors, warnings, options) {
+    if (value === undefined || value === null) {
+        return; // Optional field
+    }
+    if (typeof value !== 'string') {
+        errors.push(error('created', errors_js_1.WolsErrorCode.INVALID_DATE_FORMAT, 'created must be a string'));
+        return;
+    }
+    if (!(0, iso8601_js_1.isValidISO8601)(value)) {
+        if (options.level === 'lenient') {
+            warnings.push(warning('created', errors_js_1.WolsErrorCode.INVALID_DATE_FORMAT, `Invalid ISO 8601 date format: '${value}'`, 'Use format: YYYY-MM-DDTHH:mm:ssZ'));
+        }
+        else {
+            errors.push(error('created', errors_js_1.WolsErrorCode.INVALID_DATE_FORMAT, `created must be valid ISO 8601 datetime, got '${value}'`));
+        }
+    }
+}
+/**
+ * Validate strain object.
+ */
+function validateStrain(value, errors, _options) {
+    if (value === undefined || value === null) {
+        return; // Optional field
+    }
+    if (!isPlainObject(value)) {
+        errors.push(error('strain', errors_js_1.WolsErrorCode.INVALID_FORMAT, 'strain must be an object'));
+        return;
+    }
+    const strain = value;
+    // name is required in Strain
+    if (!isNonEmptyString(strain.name)) {
+        errors.push(error('strain.name', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'strain.name is required'));
+    }
+    // Validate generation format if present
+    if (strain.generation !== undefined) {
+        if (typeof strain.generation !== 'string' || !GENERATION_PATTERN.test(strain.generation)) {
+            errors.push(error('strain.generation', errors_js_1.WolsErrorCode.INVALID_GENERATION, `strain.generation must match pattern 'P' or 'F<number>', got '${strain.generation}'`));
+        }
+    }
+    // Validate clonalGeneration if present
+    if (strain.clonalGeneration !== undefined) {
+        if (typeof strain.clonalGeneration !== 'number' ||
+            !Number.isInteger(strain.clonalGeneration) ||
+            strain.clonalGeneration < 1) {
+            errors.push(error('strain.clonalGeneration', errors_js_1.WolsErrorCode.INVALID_FORMAT, 'strain.clonalGeneration must be a positive integer'));
+        }
+    }
+    // Validate source if present (informational, no strict enum)
+    if (strain.source !== undefined && typeof strain.source !== 'string') {
+        errors.push(error('strain.source', errors_js_1.WolsErrorCode.INVALID_FORMAT, 'strain.source must be a string'));
+    }
+    // Validate lineage if present
+    if (strain.lineage !== undefined && typeof strain.lineage !== 'string') {
+        errors.push(error('strain.lineage', errors_js_1.WolsErrorCode.INVALID_FORMAT, 'strain.lineage must be a string'));
+    }
+}
+/**
+ * Check for unknown fields and add warnings.
+ */
+function checkUnknownFields(specimen, warnings, options) {
+    if (options.allowUnknownFields) {
+        return;
+    }
+    for (const key of Object.keys(specimen)) {
+        if (!KNOWN_FIELDS.has(key)) {
+            warnings.push(warning(key, 'UNKNOWN_FIELD', `Unknown field '${key}'`, 'Unknown fields should be placed in the custom object'));
+        }
+    }
+}
+// =============================================================================
+// MAIN VALIDATION FUNCTION
+// =============================================================================
+/**
+ * Validate a specimen object against the WOLS v1.1.0 schema.
+ *
+ * @param specimen - The specimen object to validate
+ * @param options - Validation options
+ * @returns ValidationResult with errors and warnings
+ *
+ * @example
+ * ```typescript
+ * const result = validateSpecimen(specimen);
+ * if (!result.valid) {
+ *   console.error('Validation errors:', result.errors);
+ * }
+ * ```
+ */
+function validateSpecimen(specimen, options = {}) {
+    const errors = [];
+    const warnings = [];
+    // Default options
+    const opts = {
+        allowUnknownFields: options.allowUnknownFields ?? false,
+        level: options.level ?? 'strict',
+    };
+    // Handle null/undefined input
+    if (specimen === null || specimen === undefined) {
+        errors.push(error('', errors_js_1.WolsErrorCode.REQUIRED_FIELD, 'Specimen is required'));
+        return { valid: false, errors, warnings };
+    }
+    // Handle non-object input
+    if (!isPlainObject(specimen)) {
+        errors.push(error('', errors_js_1.WolsErrorCode.INVALID_FORMAT, 'Specimen must be an object'));
+        return { valid: false, errors, warnings };
+    }
+    const data = specimen;
+    // Validate required JSON-LD fields
+    validateContext(data['@context'], errors, opts);
+    validateType(data['@type'], errors, opts);
+    // Validate required specimen fields
+    validateId(data['id'], errors, opts);
+    validateVersion(data['version'], errors, opts);
+    validateSpecimenType(data['type'], errors, opts);
+    validateSpecies(data['species'], errors, opts);
+    // Validate optional fields
+    validateStage(data['stage'], errors, warnings, opts);
+    validateCreated(data['created'], errors, warnings, opts);
+    validateStrain(data['strain'], errors, opts);
+    // Check for unknown fields
+    checkUnknownFields(data, warnings, opts);
+    return {
+        valid: errors.length === 0,
+        errors,
+        warnings,
+    };
+}
+//# sourceMappingURL=validator.js.map

package/dist/cjs/validator.js.map

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