npm - @weavelogic/knowledge-graph-agent - Versions diffs - 0.7.4 → 0.8.1 - Mend

@weavelogic/knowledge-graph-agent 0.7.4 → 0.8.1

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package/dist/cli/commands/hive-mind/find-connections.js.map CHANGED Viewed

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1	- {"version":3,"file":"find-connections.js","sources":["../../../../src/cli/commands/hive-mind/find-connections.ts"],"sourcesContent":["/*\n Hive Mind - Connection Finder\n \n Uses TF-IDF similarity to find potential connections between documents.\n * Suggests links for orphan files to reconnect the knowledge graph.\n \n SPEC-003: Hive Mind Reconnection Tools\n /\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport as path from 'path';\nimport { readFile, writeFile } from 'fs/promises';\nimport { glob } from 'fast-glob';\nimport matter from 'gray-matter';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface FindConnectionsOptions {\n threshold?: string;\n suggest?: boolean;\n limit?: string;\n output?: string;\n json?: boolean;\n verbose?: boolean;\n}\n\nexport interface SimilarityMatch {\n source: string;\n target: string;\n similarity: number;\n sharedTerms: string[];\n}\n\nexport interface DocumentVector {\n file: string;\n terms: Map<string, number>;\n magnitude: number;\n}\n\nexport interface ConnectionFinderResult {\n totalDocuments: number;\n suggestedConnections: SimilarityMatch[];\n orphanConnections: SimilarityMatch[];\n termCount: number;\n averageSimilarity: number;\n}\n\n// ============================================================================\n// TF-IDF Implementation\n// ============================================================================\n\n/*\n Simple tokenizer - splits text into words\n /\nfunction tokenize(text: string): string[] {\n // Remove code blocks\n const noCode = text.replace(/```[\\s\\S]?```/g, '');\n // Remove inline code\n const noInline = noCode.replace(/`[^`]+`/g, '');\n // Remove URLs\n const noUrls = noInline.replace(/https?:\\/\\/[^\\s]+/g, '');\n // Remove markdown links but keep text\n const noLinks = noUrls.replace(/\\[([^\\]]+)\\]\$[^)]+\$/g, '$1');\n // Remove wiki links but keep text\n const noWiki = noLinks.replace(/\\[\\[([^\\]\|]+)(?:\\\|[^\\]]+)?\\]\\]/g, '$1');\n // Remove special characters and split\n const words = noWiki\n .toLowerCase()\n .replace(/[^a-z0-9\\s-]/g, ' ')\n .split(/\\s+/)\n .filter(word => word.length > 2 && word.length < 30);\n\n return words;\n}\n\n/*\n Stopwords to filter out\n /\nconst STOPWORDS = new Set([\n 'the', 'and', 'for', 'are', 'but', 'not', 'you', 'all', 'can', 'had', 'her',\n 'was', 'one', 'our', 'out', 'has', 'have', 'been', 'were', 'some', 'this',\n 'that', 'what', 'when', 'where', 'which', 'while', 'who', 'will', 'with',\n 'would', 'there', 'their', 'from', 'they', 'been', 'said', 'each', 'she',\n 'how', 'its', 'may', 'more', 'than', 'then', 'these', 'into', 'only',\n 'other', 'also', 'any', 'such', 'because', 'about', 'just', 'could', 'very',\n]);\n\n/\n Filter stopwords\n /\nfunction filterStopwords(words: string[]): string[] {\n return words.filter(word => !STOPWORDS.has(word));\n}\n\n// ============================================================================\n// Connection Finder Class\n// ============================================================================\n\nexport class ConnectionFinder {\n private documents: Map<string, string> = new Map();\n private documentVectors: Map<string, DocumentVector> = new Map();\n private documentFrequency: Map<string, number> = new Map();\n private totalDocuments = 0;\n\n /\n Build TF-IDF index from vault\n /\n async buildIndex(vaultPath: string): Promise<void> {\n const resolvedPath = path.resolve(vaultPath);\n\n // Find all markdown files\n const files = await glob('/.md', {\n cwd: resolvedPath,\n ignore: ['node_modules/', '.git/', 'dist/*'],\n absolute: false,\n });\n\n if (files.length === 0) {\n throw new Error(`No markdown files found in: ${resolvedPath}`);\n }\n\n this.documents.clear();\n this.documentVectors.clear();\n this.documentFrequency.clear();\n this.totalDocuments = files.length;\n\n // First pass: calculate document frequency\n const termDocuments = new Map<string, Set<string>>();\n\n for (const file of files) {\n const filePath = path.join(resolvedPath, file);\n const content = await readFile(filePath, 'utf-8');\n const { content: bodyContent, data: frontmatter } = matter(content);\n\n // Combine content with frontmatter fields\n const fullText = [\n frontmatter.title \|\| '',\n frontmatter.description \|\| '',\n Array.isArray(frontmatter.tags) ? frontmatter.tags.join(' ') : '',\n Array.isArray(frontmatter.aliases) ? frontmatter.aliases.join(' ') : '',\n bodyContent,\n ].join(' ');\n\n this.documents.set(file, fullText);\n\n const tokens = filterStopwords(tokenize(fullText));\n const uniqueTerms = new Set(tokens);\n\n for (const term of uniqueTerms) {\n if (!termDocuments.has(term)) {\n termDocuments.set(term, new Set());\n }\n termDocuments.get(term)!.add(file);\n }\n }\n\n // Store document frequency\n for (const [term, docs] of termDocuments) {\n this.documentFrequency.set(term, docs.size);\n }\n\n // Second pass: calculate TF-IDF vectors\n for (const file of files) {\n const content = this.documents.get(file)!;\n const tokens = filterStopwords(tokenize(content));\n\n // Calculate term frequency\n const termFreq = new Map<string, number>();\n for (const term of tokens) {\n termFreq.set(term, (termFreq.get(term) \|\| 0) + 1);\n }\n\n // Calculate TF-IDF\n const tfidf = new Map<string, number>();\n const maxFreq = Math.max(...termFreq.values(), 1);\n\n for (const [term, freq] of termFreq) {\n const tf = freq / maxFreq; // Normalized TF\n const df = this.documentFrequency.get(term) \|\| 1;\n const idf = Math.log(this.totalDocuments / df);\n tfidf.set(term, tf idf);\n }\n\n // Calculate magnitude\n let magnitude = 0;\n for (const value of tfidf.values()) {\n magnitude += value * value;\n }\n magnitude = Math.sqrt(magnitude);\n\n this.documentVectors.set(file, {\n file,\n terms: tfidf,\n magnitude,\n });\n }\n }\n\n /*\n Find similar documents to a source file\n /\n findSimilar(sourceFile: string, threshold = 0.3, limit = 10): SimilarityMatch[] {\n const sourceVector = this.documentVectors.get(sourceFile);\n if (!sourceVector) {\n return [];\n }\n\n const matches: SimilarityMatch[] = [];\n\n for (const [targetFile, targetVector] of this.documentVectors) {\n if (targetFile === sourceFile) continue;\n\n const similarity = this.cosineSimilarity(sourceVector, targetVector);\n\n if (similarity >= threshold) {\n const sharedTerms = this.findSharedTerms(sourceVector, targetVector);\n matches.push({\n source: sourceFile,\n target: targetFile,\n similarity: Math.round(similarity 1000) / 1000,\n sharedTerms: sharedTerms.slice(0, 5),\n });\n }\n }\n\n // Sort by similarity descending\n matches.sort((a, b) => b.similarity - a.similarity);\n\n return matches.slice(0, limit);\n }\n\n /*\n Calculate cosine similarity between two document vectors\n /\n private cosineSimilarity(a: DocumentVector, b: DocumentVector): number {\n if (a.magnitude === 0 \|\| b.magnitude === 0) return 0;\n\n let dotProduct = 0;\n for (const [term, aValue] of a.terms) {\n const bValue = b.terms.get(term) \|\| 0;\n dotProduct += aValue bValue;\n }\n\n return dotProduct / (a.magnitude * b.magnitude);\n }\n\n /*\n Find shared terms between two documents\n /\n private findSharedTerms(a: DocumentVector, b: DocumentVector): string[] {\n const shared: Array<{ term: string; score: number }> = [];\n\n for (const [term, aValue] of a.terms) {\n const bValue = b.terms.get(term);\n if (bValue && bValue > 0) {\n shared.push({ term, score: aValue bValue });\n }\n }\n\n // Sort by combined score\n shared.sort((a, b) => b.score - a.score);\n\n return shared.map(s => s.term);\n }\n\n /*\n Suggest connections for orphan files\n /\n async suggestConnections(\n vaultPath: string,\n orphanFiles: string[],\n threshold = 0.3,\n limit = 5\n ): Promise<SimilarityMatch[]> {\n // Build index if not already built\n if (this.documentVectors.size === 0) {\n await this.buildIndex(vaultPath);\n }\n\n const suggestions: SimilarityMatch[] = [];\n\n for (const orphan of orphanFiles) {\n const similar = this.findSimilar(orphan, threshold, limit);\n suggestions.push(...similar);\n }\n\n // Sort by similarity descending\n suggestions.sort((a, b) => b.similarity - a.similarity);\n\n return suggestions;\n }\n\n /\n Find all potential connections above threshold\n /\n async findAllConnections(\n vaultPath: string,\n threshold = 0.3,\n limit = 100\n ): Promise<ConnectionFinderResult> {\n // Build index if not already built\n if (this.documentVectors.size === 0) {\n await this.buildIndex(vaultPath);\n }\n\n const allConnections: SimilarityMatch[] = [];\n const processed = new Set<string>();\n\n for (const sourceFile of this.documentVectors.keys()) {\n const similar = this.findSimilar(sourceFile, threshold, 10);\n for (const match of similar) {\n // Avoid duplicates (A-B and B-A)\n const key = [match.source, match.target].sort().join('\|');\n if (!processed.has(key)) {\n processed.add(key);\n allConnections.push(match);\n }\n }\n }\n\n // Sort by similarity descending\n allConnections.sort((a, b) => b.similarity - a.similarity);\n\n const topConnections = allConnections.slice(0, limit);\n const averageSimilarity = topConnections.length > 0\n ? topConnections.reduce((sum, c) => sum + c.similarity, 0) / topConnections.length\n : 0;\n\n return {\n totalDocuments: this.totalDocuments,\n suggestedConnections: topConnections,\n orphanConnections: [],\n termCount: this.documentFrequency.size,\n averageSimilarity: Math.round(averageSimilarity 1000) / 1000,\n };\n }\n\n /*\n Get index statistics\n /\n getStats(): { documents: number; terms: number } {\n return {\n documents: this.documentVectors.size,\n terms: this.documentFrequency.size,\n };\n }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createFindConnectionsCommand(): Command {\n const command = new Command('find-connections')\n .description('Find potential connections using TF-IDF similarity')\n .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n .option('-t, --threshold <number>', 'Similarity threshold (0-1)', '0.3')\n .option('-l, --limit <number>', 'Maximum connections to return', '50')\n .option('--suggest', 'Focus on orphan files')\n .option('-o, --output <file>', 'Output file for results')\n .option('--json', 'Output as JSON')\n .option('-v, --verbose', 'Show detailed output')\n .action(async (vaultPath: string, options: FindConnectionsOptions) => {\n const finder = new ConnectionFinder();\n const threshold = parseFloat(options.threshold \|\| '0.3');\n const limit = parseInt(options.limit \|\| '50', 10);\n\n console.log(chalk.cyan('\\nBuilding TF-IDF index...\\n'));\n\n try {\n await finder.buildIndex(vaultPath);\n const stats = finder.getStats();\n\n console.log(chalk.white(` Documents indexed: ${stats.documents}`));\n console.log(chalk.white(` Unique terms: ${stats.terms}`));\n console.log('');\n\n const result = await finder.findAllConnections(vaultPath, threshold, limit);\n\n if (options.json) {\n if (options.output) {\n await writeFile(options.output, JSON.stringify(result, null, 2));\n console.log(chalk.green(`Results written to: ${options.output}`));\n } else {\n console.log(JSON.stringify(result, null, 2));\n }\n } else {\n console.log(chalk.bold('Potential Connections Found:\\n'));\n\n if (result.suggestedConnections.length === 0) {\n console.log(chalk.yellow(' No connections found above threshold.'));\n console.log(chalk.gray(' Try lowering the threshold with -t option.\\n'));\n } else {\n for (const conn of result.suggestedConnections.slice(0, options.verbose ? 50 : 20)) {\n const simColor = conn.similarity >= 0.5 ? chalk.green : conn.similarity >= 0.3 ? chalk.yellow : chalk.gray;\n console.log(\n simColor(` [${(conn.similarity 100).toFixed(1)}%]`),\n chalk.white(conn.source),\n chalk.gray('->'),\n chalk.cyan(conn.target)\n );\n if (options.verbose && conn.sharedTerms.length > 0) {\n console.log(chalk.gray(` Terms: ${conn.sharedTerms.join(', ')}`));\n }\n }\n\n if (result.suggestedConnections.length > (options.verbose ? 50 : 20)) {\n console.log(\n chalk.gray(`\\n ... and ${result.suggestedConnections.length - (options.verbose ? 50 : 20)} more`)\n );\n }\n\n console.log('');\n console.log(chalk.bold('Summary:'));\n console.log(chalk.white(` Total Documents: ${result.totalDocuments}`));\n console.log(chalk.white(` Connections Found: ${result.suggestedConnections.length}`));\n console.log(chalk.white(` Average Similarity: ${(result.averageSimilarity * 100).toFixed(1)}%`));\n console.log('');\n }\n\n // Write to output file if specified\n if (options.output) {\n const reportLines = [\n '# Connection Suggestions\\n',\n `Generated: ${new Date().toISOString()}\\n`,\n `Threshold: ${threshold}\\n`,\n '',\n '## Suggested Links\\n',\n ];\n\n for (const conn of result.suggestedConnections) {\n reportLines.push(`- ${conn.source} -> [[${conn.target}]]`);\n reportLines.push(` - Similarity: ${(conn.similarity * 100).toFixed(1)}%`);\n if (conn.sharedTerms.length > 0) {\n reportLines.push(` - Shared terms: ${conn.sharedTerms.join(', ')}`);\n }\n }\n\n await writeFile(options.output, reportLines.join('\\n'));\n console.log(chalk.green(`Report written to: ${options.output}`));\n }\n\n // Show next steps\n console.log(chalk.bold('Next Steps:'));\n console.log(chalk.gray(' 1. Review suggested connections'));\n console.log(chalk.gray(' 2. Add [[wiki-links]] to connect related documents'));\n console.log(chalk.gray(' 3. 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1	+ {"version":3,"file":"find-connections.js","sources":["../../../../src/cli/commands/hive-mind/find-connections.ts"],"sourcesContent":["/*\n Hive Mind - Connection Finder\n \n Uses TF-IDF similarity to find potential connections between documents.\n * Suggests links for orphan files to reconnect the knowledge graph.\n \n SPEC-003: Hive Mind Reconnection Tools\n /\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport as path from 'path';\nimport { readFile, writeFile } from 'fs/promises';\nimport fg from 'fast-glob';\nimport matter from 'gray-matter';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface FindConnectionsOptions {\n threshold?: string;\n suggest?: boolean;\n limit?: string;\n output?: string;\n json?: boolean;\n verbose?: boolean;\n}\n\nexport interface SimilarityMatch {\n source: string;\n target: string;\n similarity: number;\n sharedTerms: string[];\n}\n\nexport interface DocumentVector {\n file: string;\n terms: Map<string, number>;\n magnitude: number;\n}\n\nexport interface ConnectionFinderResult {\n totalDocuments: number;\n suggestedConnections: SimilarityMatch[];\n orphanConnections: SimilarityMatch[];\n termCount: number;\n averageSimilarity: number;\n}\n\n// ============================================================================\n// TF-IDF Implementation\n// ============================================================================\n\n/*\n Simple tokenizer - splits text into words\n /\nfunction tokenize(text: string): string[] {\n // Remove code blocks\n const noCode = text.replace(/```[\\s\\S]?```/g, '');\n // Remove inline code\n const noInline = noCode.replace(/`[^`]+`/g, '');\n // Remove URLs\n const noUrls = noInline.replace(/https?:\\/\\/[^\\s]+/g, '');\n // Remove markdown links but keep text\n const noLinks = noUrls.replace(/\\[([^\\]]+)\\]\$[^)]+\$/g, '$1');\n // Remove wiki links but keep text\n const noWiki = noLinks.replace(/\\[\\[([^\\]\|]+)(?:\\\|[^\\]]+)?\\]\\]/g, '$1');\n // Remove special characters and split\n const words = noWiki\n .toLowerCase()\n .replace(/[^a-z0-9\\s-]/g, ' ')\n .split(/\\s+/)\n .filter(word => word.length > 2 && word.length < 30);\n\n return words;\n}\n\n/*\n Stopwords to filter out\n /\nconst STOPWORDS = new Set([\n 'the', 'and', 'for', 'are', 'but', 'not', 'you', 'all', 'can', 'had', 'her',\n 'was', 'one', 'our', 'out', 'has', 'have', 'been', 'were', 'some', 'this',\n 'that', 'what', 'when', 'where', 'which', 'while', 'who', 'will', 'with',\n 'would', 'there', 'their', 'from', 'they', 'been', 'said', 'each', 'she',\n 'how', 'its', 'may', 'more', 'than', 'then', 'these', 'into', 'only',\n 'other', 'also', 'any', 'such', 'because', 'about', 'just', 'could', 'very',\n]);\n\n/\n Filter stopwords\n /\nfunction filterStopwords(words: string[]): string[] {\n return words.filter(word => !STOPWORDS.has(word));\n}\n\n// ============================================================================\n// Connection Finder Class\n// ============================================================================\n\nexport class ConnectionFinder {\n private documents: Map<string, string> = new Map();\n private documentVectors: Map<string, DocumentVector> = new Map();\n private documentFrequency: Map<string, number> = new Map();\n private totalDocuments = 0;\n\n /\n Build TF-IDF index from vault\n /\n async buildIndex(vaultPath: string): Promise<void> {\n const resolvedPath = path.resolve(vaultPath);\n\n // Find all markdown files\n const files = await fg('/.md', {\n cwd: resolvedPath,\n ignore: ['node_modules/', '.git/', 'dist/*'],\n absolute: false,\n });\n\n if (files.length === 0) {\n throw new Error(`No markdown files found in: ${resolvedPath}`);\n }\n\n this.documents.clear();\n this.documentVectors.clear();\n this.documentFrequency.clear();\n this.totalDocuments = files.length;\n\n // First pass: calculate document frequency\n const termDocuments = new Map<string, Set<string>>();\n\n for (const file of files) {\n const filePath = path.join(resolvedPath, file);\n const content = await readFile(filePath, 'utf-8');\n const { content: bodyContent, data: frontmatter } = matter(content);\n\n // Combine content with frontmatter fields\n const fullText = [\n frontmatter.title \|\| '',\n frontmatter.description \|\| '',\n Array.isArray(frontmatter.tags) ? frontmatter.tags.join(' ') : '',\n Array.isArray(frontmatter.aliases) ? frontmatter.aliases.join(' ') : '',\n bodyContent,\n ].join(' ');\n\n this.documents.set(file, fullText);\n\n const tokens = filterStopwords(tokenize(fullText));\n const uniqueTerms = new Set(tokens);\n\n for (const term of uniqueTerms) {\n if (!termDocuments.has(term)) {\n termDocuments.set(term, new Set());\n }\n termDocuments.get(term)!.add(file);\n }\n }\n\n // Store document frequency\n for (const [term, docs] of termDocuments) {\n this.documentFrequency.set(term, docs.size);\n }\n\n // Second pass: calculate TF-IDF vectors\n for (const file of files) {\n const content = this.documents.get(file)!;\n const tokens = filterStopwords(tokenize(content));\n\n // Calculate term frequency\n const termFreq = new Map<string, number>();\n for (const term of tokens) {\n termFreq.set(term, (termFreq.get(term) \|\| 0) + 1);\n }\n\n // Calculate TF-IDF\n const tfidf = new Map<string, number>();\n const maxFreq = Math.max(...termFreq.values(), 1);\n\n for (const [term, freq] of termFreq) {\n const tf = freq / maxFreq; // Normalized TF\n const df = this.documentFrequency.get(term) \|\| 1;\n const idf = Math.log(this.totalDocuments / df);\n tfidf.set(term, tf idf);\n }\n\n // Calculate magnitude\n let magnitude = 0;\n for (const value of tfidf.values()) {\n magnitude += value * value;\n }\n magnitude = Math.sqrt(magnitude);\n\n this.documentVectors.set(file, {\n file,\n terms: tfidf,\n magnitude,\n });\n }\n }\n\n /*\n Find similar documents to a source file\n /\n findSimilar(sourceFile: string, threshold = 0.3, limit = 10): SimilarityMatch[] {\n const sourceVector = this.documentVectors.get(sourceFile);\n if (!sourceVector) {\n return [];\n }\n\n const matches: SimilarityMatch[] = [];\n\n for (const [targetFile, targetVector] of this.documentVectors) {\n if (targetFile === sourceFile) continue;\n\n const similarity = this.cosineSimilarity(sourceVector, targetVector);\n\n if (similarity >= threshold) {\n const sharedTerms = this.findSharedTerms(sourceVector, targetVector);\n matches.push({\n source: sourceFile,\n target: targetFile,\n similarity: Math.round(similarity 1000) / 1000,\n sharedTerms: sharedTerms.slice(0, 5),\n });\n }\n }\n\n // Sort by similarity descending\n matches.sort((a, b) => b.similarity - a.similarity);\n\n return matches.slice(0, limit);\n }\n\n /*\n Calculate cosine similarity between two document vectors\n /\n private cosineSimilarity(a: DocumentVector, b: DocumentVector): number {\n if (a.magnitude === 0 \|\| b.magnitude === 0) return 0;\n\n let dotProduct = 0;\n for (const [term, aValue] of a.terms) {\n const bValue = b.terms.get(term) \|\| 0;\n dotProduct += aValue bValue;\n }\n\n return dotProduct / (a.magnitude * b.magnitude);\n }\n\n /*\n Find shared terms between two documents\n /\n private findSharedTerms(a: DocumentVector, b: DocumentVector): string[] {\n const shared: Array<{ term: string; score: number }> = [];\n\n for (const [term, aValue] of a.terms) {\n const bValue = b.terms.get(term);\n if (bValue && bValue > 0) {\n shared.push({ term, score: aValue bValue });\n }\n }\n\n // Sort by combined score\n shared.sort((a, b) => b.score - a.score);\n\n return shared.map(s => s.term);\n }\n\n /*\n Suggest connections for orphan files\n /\n async suggestConnections(\n vaultPath: string,\n orphanFiles: string[],\n threshold = 0.3,\n limit = 5\n ): Promise<SimilarityMatch[]> {\n // Build index if not already built\n if (this.documentVectors.size === 0) {\n await this.buildIndex(vaultPath);\n }\n\n const suggestions: SimilarityMatch[] = [];\n\n for (const orphan of orphanFiles) {\n const similar = this.findSimilar(orphan, threshold, limit);\n suggestions.push(...similar);\n }\n\n // Sort by similarity descending\n suggestions.sort((a, b) => b.similarity - a.similarity);\n\n return suggestions;\n }\n\n /\n Find all potential connections above threshold\n /\n async findAllConnections(\n vaultPath: string,\n threshold = 0.3,\n limit = 100\n ): Promise<ConnectionFinderResult> {\n // Build index if not already built\n if (this.documentVectors.size === 0) {\n await this.buildIndex(vaultPath);\n }\n\n const allConnections: SimilarityMatch[] = [];\n const processed = new Set<string>();\n\n for (const sourceFile of this.documentVectors.keys()) {\n const similar = this.findSimilar(sourceFile, threshold, 10);\n for (const match of similar) {\n // Avoid duplicates (A-B and B-A)\n const key = [match.source, match.target].sort().join('\|');\n if (!processed.has(key)) {\n processed.add(key);\n allConnections.push(match);\n }\n }\n }\n\n // Sort by similarity descending\n allConnections.sort((a, b) => b.similarity - a.similarity);\n\n const topConnections = allConnections.slice(0, limit);\n const averageSimilarity = topConnections.length > 0\n ? topConnections.reduce((sum, c) => sum + c.similarity, 0) / topConnections.length\n : 0;\n\n return {\n totalDocuments: this.totalDocuments,\n suggestedConnections: topConnections,\n orphanConnections: [],\n termCount: this.documentFrequency.size,\n averageSimilarity: Math.round(averageSimilarity 1000) / 1000,\n };\n }\n\n /*\n Get index statistics\n /\n getStats(): { documents: number; terms: number } {\n return {\n documents: this.documentVectors.size,\n terms: this.documentFrequency.size,\n };\n }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createFindConnectionsCommand(): Command {\n const command = new Command('find-connections')\n .description('Find potential connections using TF-IDF similarity')\n .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n .option('-t, --threshold <number>', 'Similarity threshold (0-1)', '0.3')\n .option('-l, --limit <number>', 'Maximum connections to return', '50')\n .option('--suggest', 'Focus on orphan files')\n .option('-o, --output <file>', 'Output file for results')\n .option('--json', 'Output as JSON')\n .option('-v, --verbose', 'Show detailed output')\n .action(async (vaultPath: string, options: FindConnectionsOptions) => {\n const finder = new ConnectionFinder();\n const threshold = parseFloat(options.threshold \|\| '0.3');\n const limit = parseInt(options.limit \|\| '50', 10);\n\n console.log(chalk.cyan('\\nBuilding TF-IDF index...\\n'));\n\n try {\n await finder.buildIndex(vaultPath);\n const stats = finder.getStats();\n\n console.log(chalk.white(` Documents indexed: ${stats.documents}`));\n console.log(chalk.white(` Unique terms: ${stats.terms}`));\n console.log('');\n\n const result = await finder.findAllConnections(vaultPath, threshold, limit);\n\n if (options.json) {\n if (options.output) {\n await writeFile(options.output, JSON.stringify(result, null, 2));\n console.log(chalk.green(`Results written to: ${options.output}`));\n } else {\n console.log(JSON.stringify(result, null, 2));\n }\n } else {\n console.log(chalk.bold('Potential Connections Found:\\n'));\n\n if (result.suggestedConnections.length === 0) {\n console.log(chalk.yellow(' No connections found above threshold.'));\n console.log(chalk.gray(' Try lowering the threshold with -t option.\\n'));\n } else {\n for (const conn of result.suggestedConnections.slice(0, options.verbose ? 50 : 20)) {\n const simColor = conn.similarity >= 0.5 ? chalk.green : conn.similarity >= 0.3 ? chalk.yellow : chalk.gray;\n console.log(\n simColor(` [${(conn.similarity 100).toFixed(1)}%]`),\n chalk.white(conn.source),\n chalk.gray('->'),\n chalk.cyan(conn.target)\n );\n if (options.verbose && conn.sharedTerms.length > 0) {\n console.log(chalk.gray(` Terms: ${conn.sharedTerms.join(', ')}`));\n }\n }\n\n if (result.suggestedConnections.length > (options.verbose ? 50 : 20)) {\n console.log(\n chalk.gray(`\\n ... and ${result.suggestedConnections.length - (options.verbose ? 50 : 20)} more`)\n );\n }\n\n console.log('');\n console.log(chalk.bold('Summary:'));\n console.log(chalk.white(` Total Documents: ${result.totalDocuments}`));\n console.log(chalk.white(` Connections Found: ${result.suggestedConnections.length}`));\n console.log(chalk.white(` Average Similarity: ${(result.averageSimilarity * 100).toFixed(1)}%`));\n console.log('');\n }\n\n // Write to output file if specified\n if (options.output) {\n const reportLines = [\n '# Connection Suggestions\\n',\n `Generated: ${new Date().toISOString()}\\n`,\n `Threshold: ${threshold}\\n`,\n '',\n '## Suggested Links\\n',\n ];\n\n for (const conn of result.suggestedConnections) {\n reportLines.push(`- ${conn.source} -> [[${conn.target}]]`);\n reportLines.push(` - Similarity: ${(conn.similarity * 100).toFixed(1)}%`);\n if (conn.sharedTerms.length > 0) {\n reportLines.push(` - Shared terms: ${conn.sharedTerms.join(', ')}`);\n }\n }\n\n await writeFile(options.output, reportLines.join('\\n'));\n console.log(chalk.green(`Report written to: ${options.output}`));\n }\n\n // Show next steps\n console.log(chalk.bold('Next Steps:'));\n console.log(chalk.gray(' 1. Review suggested connections'));\n console.log(chalk.gray(' 2. Add [[wiki-links]] to connect related documents'));\n console.log(chalk.gray(' 3. Run kg analyze-links to verify improvement'));\n console.log('');\n }\n } catch (error) {\n console.error(chalk.red('Error:'), error instanceof Error ? error.message : 'Unknown error');\n process.exit(1);\n }\n });\n\n return command;\n}\n\nexport default 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package/dist/cli/commands/hive-mind/validate-names.js CHANGED Viewed

@@ -2,7 +2,7 @@ import { Command } from "commander";
 import chalk from "chalk";
 import * as path from "path";
 import { writeFile, access, mkdir, rename } from "fs/promises";
-import { glob } from "fast-glob";
+import fg from "fast-glob";
 const SCHEMAS = {
   kebab: {
     name: "kebab-case",
@@ -46,7 +46,7 @@ class NameValidator {
    */
   async validateVault(vaultPath, options = {}) {
     const resolvedPath = path.resolve(vaultPath);
-    const files = await glob("**/*.md", {
+    const files = await fg("**/*.md", {
       cwd: resolvedPath,
       ignore: ["node_modules/**", ".git/**", "dist/**"],
       absolute: false

package/dist/cli/commands/hive-mind/validate-names.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"validate-names.js","sources":["../../../../src/cli/commands/hive-mind/validate-names.ts"],"sourcesContent":["/*\n Hive Mind - Name Validator\n \n Validates file naming schema in a vault to ensure consistent, linkable names.\n * Supports kebab-case, lowercase, and other naming conventions.\n \n SPEC-003: Hive Mind Reconnection Tools\n /\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport as path from 'path';\nimport { readdir, rename, access, mkdir, writeFile } from 'fs/promises';\nimport { glob } from 'fast-glob';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface ValidateNamesOptions {\n fix?: boolean;\n dryRun?: boolean;\n schema?: string;\n output?: string;\n json?: boolean;\n verbose?: boolean;\n}\n\nexport interface InvalidFile {\n file: string;\n issues: string[];\n suggested: string;\n}\n\nexport interface ValidationResult {\n valid: string[];\n invalid: InvalidFile[];\n statistics: {\n totalFiles: number;\n validCount: number;\n invalidCount: number;\n commonIssues: Map<string, number>;\n };\n}\n\nexport interface NamingSchema {\n name: string;\n patterns: {\n lowercase: boolean;\n separator: '-' \| '_' \| '.';\n maxLength: number;\n allowedChars: RegExp;\n reservedNames: string[];\n allowMixedSeparators?: boolean;\n };\n}\n\n// ============================================================================\n// Predefined Schemas\n// ============================================================================\n\nconst SCHEMAS: Record<string, NamingSchema> = {\n kebab: {\n name: 'kebab-case',\n patterns: {\n lowercase: true,\n separator: '-',\n maxLength: 100,\n allowedChars: /^[a-z0-9-]+$/,\n reservedNames: ['index', 'readme', 'changelog'],\n },\n },\n snake: {\n name: 'snake_case',\n patterns: {\n lowercase: true,\n separator: '_',\n maxLength: 100,\n allowedChars: /^[a-z0-9_]+$/,\n reservedNames: ['index', 'readme', 'changelog'],\n },\n },\n obsidian: {\n name: 'Obsidian-friendly',\n patterns: {\n lowercase: false,\n separator: '-',\n maxLength: 200,\n allowedChars: /^[a-zA-Z0-9-_ ]+$/,\n reservedNames: [],\n allowMixedSeparators: true,\n },\n },\n};\n\n// ============================================================================\n// Name Validator Class\n// ============================================================================\n\nexport class NameValidator {\n private schema: NamingSchema;\n\n constructor(schemaName = 'kebab') {\n this.schema = SCHEMAS[schemaName] \|\| SCHEMAS.kebab;\n }\n\n /*\n Validate all files in a vault\n /\n async validateVault(vaultPath: string, options: ValidateNamesOptions = {}): Promise<ValidationResult> {\n const resolvedPath = path.resolve(vaultPath);\n\n // Find all markdown files\n const files = await glob('/.md', {\n cwd: resolvedPath,\n ignore: ['node_modules/', '.git/', 'dist/'],\n absolute: false,\n });\n\n if (files.length === 0) {\n throw new Error(`No markdown files found in: ${resolvedPath}`);\n }\n\n const valid: string[] = [];\n const invalid: InvalidFile[] = [];\n const commonIssues = new Map<string, number>();\n\n for (const file of files) {\n const basename = path.basename(file, '.md');\n const issues = this.validateFilename(basename);\n\n if (issues.length === 0) {\n valid.push(file);\n } else {\n const suggested = this.suggestRename(basename);\n\n invalid.push({\n file,\n issues,\n suggested: file.replace(basename + '.md', suggested + '.md'),\n });\n\n // Count issues\n for (const issue of issues) {\n commonIssues.set(issue, (commonIssues.get(issue) \|\| 0) + 1);\n }\n }\n }\n\n return {\n valid,\n invalid,\n statistics: {\n totalFiles: files.length,\n validCount: valid.length,\n invalidCount: invalid.length,\n commonIssues,\n },\n };\n }\n\n /\n * Validate a single filename\n /\n validateFilename(filename: string): string[] {\n const issues: string[] = [];\n const { patterns } = this.schema;\n\n // Check for uppercase (if lowercase required)\n if (patterns.lowercase && filename !== filename.toLowerCase()) {\n issues.push('Contains uppercase characters');\n }\n\n // Check for spaces (unless pattern allows spaces)\n const allowsSpaces = patterns.allowedChars.test('a b');\n if (!allowsSpaces && filename.includes(' ')) {\n issues.push('Contains spaces');\n }\n\n // Check for special characters\n const testName = patterns.lowercase\n ? filename.toLowerCase()\n : filename;\n if (!patterns.allowedChars.test(testName)) {\n issues.push(`Contains invalid characters (allowed: ${patterns.allowedChars})`);\n }\n\n // Check length\n if (filename.length > patterns.maxLength) {\n issues.push(`Exceeds maximum length (${patterns.maxLength})`);\n }\n\n // Check for consecutive separators\n const doubleSep = patterns.separator + patterns.separator;\n if (filename.includes(doubleSep)) {\n issues.push(`Contains consecutive separators (${doubleSep})`);\n }\n\n // Check for leading/trailing separators\n if (filename.startsWith(patterns.separator) \|\| filename.endsWith(patterns.separator)) {\n issues.push('Starts or ends with separator');\n }\n\n // Check for underscores when using kebab-case (skip if mixed separators allowed)\n if (!patterns.allowMixedSeparators && patterns.separator === '-' && filename.includes('_')) {\n issues.push('Contains underscores (use hyphens)');\n }\n\n // Check for mixed separators (skip if allowed)\n if (!patterns.allowMixedSeparators) {\n if (patterns.separator === '-' && filename.includes('_')) {\n issues.push('Mixed separators (hyphens and underscores)');\n }\n if (patterns.separator === '_' && filename.includes('-')) {\n issues.push('Mixed separators (underscores and hyphens)');\n }\n }\n\n return issues;\n }\n\n /\n Suggest a valid filename\n /\n suggestRename(filename: string): string {\n const { patterns } = this.schema;\n\n let suggested = filename;\n\n // Convert to lowercase if required\n if (patterns.lowercase) {\n suggested = suggested.toLowerCase();\n }\n\n // Replace spaces with separator\n suggested = suggested.replace(/\\s+/g, patterns.separator);\n\n // Replace underscores with separator (for kebab-case)\n if (patterns.separator === '-') {\n suggested = suggested.replace(/_+/g, '-');\n }\n\n // Replace hyphens with separator (for snake_case)\n if (patterns.separator === '_') {\n suggested = suggested.replace(/-+/g, '_');\n }\n\n // Remove invalid characters\n suggested = suggested.replace(/[^a-z0-9-_]/g, '');\n\n // Remove consecutive separators\n const sepRegex = new RegExp(`${patterns.separator}+`, 'g');\n suggested = suggested.replace(sepRegex, patterns.separator);\n\n // Remove leading/trailing separators\n suggested = suggested.replace(new RegExp(`^${patterns.separator}+\|${patterns.separator}+$`, 'g'), '');\n\n // Truncate if too long\n if (suggested.length > patterns.maxLength) {\n suggested = suggested.substring(0, patterns.maxLength);\n // Clean up any trailing separator after truncation\n suggested = suggested.replace(new RegExp(`${patterns.separator}+$`, 'g'), '');\n }\n\n return suggested \|\| 'untitled';\n }\n\n /\n Rename files (with safety checks)\n /\n async renameFiles(\n vaultPath: string,\n invalidFiles: InvalidFile[],\n dryRun = false\n ): Promise<Array<{ from: string; to: string; success: boolean; error?: string }>> {\n const resolvedPath = path.resolve(vaultPath);\n const results: Array<{ from: string; to: string; success: boolean; error?: string }> = [];\n\n for (const { file, suggested } of invalidFiles) {\n const fromPath = path.join(resolvedPath, file);\n const toPath = path.join(resolvedPath, suggested);\n\n // Check if target already exists\n try {\n await access(toPath);\n results.push({\n from: file,\n to: suggested,\n success: false,\n error: 'Target file already exists',\n });\n continue;\n } catch {\n // Target doesn't exist, we can proceed\n }\n\n if (dryRun) {\n results.push({\n from: file,\n to: suggested,\n success: true,\n });\n } else {\n try {\n // Ensure target directory exists\n await mkdir(path.dirname(toPath), { recursive: true });\n await rename(fromPath, toPath);\n results.push({\n from: file,\n to: suggested,\n success: true,\n });\n } catch (error) {\n results.push({\n from: file,\n to: suggested,\n success: false,\n error: error instanceof Error ? error.message : 'Unknown error',\n });\n }\n }\n }\n\n return results;\n }\n\n /\n Get current schema\n /\n getSchema(): NamingSchema {\n return this.schema;\n }\n\n /\n Generate report\n /\n generateReport(result: ValidationResult): string {\n const lines: string[] = [];\n\n lines.push('# File Naming Validation Report\\n');\n lines.push(`Generated: ${new Date().toISOString()}\\n`);\n lines.push(`Schema: ${this.schema.name}\\n`);\n lines.push('');\n\n lines.push('## Summary\\n');\n lines.push(`\| Metric \| Value \|`);\n lines.push(`\|--------\|-------\|`);\n lines.push(`\| Total Files \| ${result.statistics.totalFiles} \|`);\n lines.push(`\| Valid \| ${result.statistics.validCount} \|`);\n lines.push(`\| Invalid \| ${result.statistics.invalidCount} \|`);\n lines.push(`\| Compliance \| ${((result.statistics.validCount / result.statistics.totalFiles) 100).toFixed(1)}% \|`);\n lines.push('');\n\n if (result.statistics.commonIssues.size > 0) {\n lines.push('## Common Issues\\n');\n const sortedIssues = [...result.statistics.commonIssues.entries()]\n .sort((a, b) => b[1] - a[1]);\n for (const [issue, count] of sortedIssues) {\n lines.push(`- ${issue}: ${count} files`);\n }\n lines.push('');\n }\n\n if (result.invalid.length > 0) {\n lines.push('## Files to Rename\\n');\n lines.push('\| Current \| Suggested \| Issues \|');\n lines.push('\|---------\|-----------\|--------\|');\n for (const { file, suggested, issues } of result.invalid.slice(0, 50)) {\n lines.push(`\| \\`${file}\\` \| \\`${suggested}\\` \| ${issues.join(', ')} \|`);\n }\n if (result.invalid.length > 50) {\n lines.push(`\\n... and ${result.invalid.length - 50} more`);\n }\n }\n\n return lines.join('\\n');\n }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createValidateNamesCommand(): Command {\n const command = new Command('validate-names')\n .description('Validate file naming schema')\n .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n .option('--schema <name>', 'Naming schema (kebab, snake, obsidian)', 'kebab')\n .option('--fix', 'Auto-rename invalid files')\n .option('--dry-run', 'Show what would be renamed without making changes')\n .option('-o, --output <file>', 'Output file for report')\n .option('--json', 'Output as JSON')\n .option('-v, --verbose', 'Show detailed output')\n .action(async (vaultPath: string, options: ValidateNamesOptions) => {\n const validator = new NameValidator(options.schema \|\| 'kebab');\n\n console.log(chalk.cyan(`\\nValidating file names (${validator.getSchema().name})...\\n`));\n\n try {\n const result = await validator.validateVault(vaultPath, options);\n\n if (options.json) {\n const jsonResult = {\n ...result,\n statistics: {\n ...result.statistics,\n commonIssues: Object.fromEntries(result.statistics.commonIssues),\n },\n };\n\n if (options.output) {\n await writeFile(options.output, JSON.stringify(jsonResult, null, 2));\n console.log(chalk.green(`Results written to: ${options.output}`));\n } else {\n console.log(JSON.stringify(jsonResult, null, 2));\n }\n } else {\n // Display summary\n const compliance = (result.statistics.validCount / result.statistics.totalFiles) * 100;\n const complianceColor = compliance === 100 ? chalk.green : compliance >= 80 ? chalk.yellow : chalk.red;\n\n console.log(chalk.bold('Summary:'));\n console.log(chalk.white(` Total Files: ${result.statistics.totalFiles}`));\n console.log(chalk.green(` Valid: ${result.statistics.validCount}`));\n console.log(chalk.red(` Invalid: ${result.statistics.invalidCount}`));\n console.log(complianceColor(` Compliance: ${compliance.toFixed(1)}%`));\n console.log('');\n\n if (result.statistics.commonIssues.size > 0) {\n console.log(chalk.bold('Common Issues:'));\n const sortedIssues = [...result.statistics.commonIssues.entries()]\n .sort((a, b) => b[1] - a[1]);\n for (const [issue, count] of sortedIssues) {\n console.log(chalk.yellow(` ${count}x ${issue}`));\n }\n console.log('');\n }\n\n if (result.invalid.length > 0 && (options.verbose \|\| options.fix \|\| options.dryRun)) {\n console.log(chalk.bold('Files to Rename:'));\n for (const { file, suggested, issues } of result.invalid.slice(0, options.verbose ? 50 : 10)) {\n console.log(chalk.red(` ${file}`));\n console.log(chalk.green(` -> ${suggested}`));\n if (options.verbose) {\n console.log(chalk.gray(` Issues: ${issues.join(', ')}`));\n }\n }\n if (result.invalid.length > (options.verbose ? 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1	+ {"version":3,"file":"validate-names.js","sources":["../../../../src/cli/commands/hive-mind/validate-names.ts"],"sourcesContent":["/*\n Hive Mind - Name Validator\n \n Validates file naming schema in a vault to ensure consistent, linkable names.\n * Supports kebab-case, lowercase, and other naming conventions.\n \n SPEC-003: Hive Mind Reconnection Tools\n /\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport as path from 'path';\nimport { readdir, rename, access, mkdir, writeFile } from 'fs/promises';\nimport fg from 'fast-glob';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface ValidateNamesOptions {\n fix?: boolean;\n dryRun?: boolean;\n schema?: string;\n output?: string;\n json?: boolean;\n verbose?: boolean;\n}\n\nexport interface InvalidFile {\n file: string;\n issues: string[];\n suggested: string;\n}\n\nexport interface ValidationResult {\n valid: string[];\n invalid: InvalidFile[];\n statistics: {\n totalFiles: number;\n validCount: number;\n invalidCount: number;\n commonIssues: Map<string, number>;\n };\n}\n\nexport interface NamingSchema {\n name: string;\n patterns: {\n lowercase: boolean;\n separator: '-' \| '_' \| '.';\n maxLength: number;\n allowedChars: RegExp;\n reservedNames: string[];\n allowMixedSeparators?: boolean;\n };\n}\n\n// ============================================================================\n// Predefined Schemas\n// ============================================================================\n\nconst SCHEMAS: Record<string, NamingSchema> = {\n kebab: {\n name: 'kebab-case',\n patterns: {\n lowercase: true,\n separator: '-',\n maxLength: 100,\n allowedChars: /^[a-z0-9-]+$/,\n reservedNames: ['index', 'readme', 'changelog'],\n },\n },\n snake: {\n name: 'snake_case',\n patterns: {\n lowercase: true,\n separator: '_',\n maxLength: 100,\n allowedChars: /^[a-z0-9_]+$/,\n reservedNames: ['index', 'readme', 'changelog'],\n },\n },\n obsidian: {\n name: 'Obsidian-friendly',\n patterns: {\n lowercase: false,\n separator: '-',\n maxLength: 200,\n allowedChars: /^[a-zA-Z0-9-_ ]+$/,\n reservedNames: [],\n allowMixedSeparators: true,\n },\n },\n};\n\n// ============================================================================\n// Name Validator Class\n// ============================================================================\n\nexport class NameValidator {\n private schema: NamingSchema;\n\n constructor(schemaName = 'kebab') {\n this.schema = SCHEMAS[schemaName] \|\| SCHEMAS.kebab;\n }\n\n /*\n Validate all files in a vault\n /\n async validateVault(vaultPath: string, options: ValidateNamesOptions = {}): Promise<ValidationResult> {\n const resolvedPath = path.resolve(vaultPath);\n\n // Find all markdown files\n const files = await fg('/.md', {\n cwd: resolvedPath,\n ignore: ['node_modules/', '.git/', 'dist/'],\n absolute: false,\n });\n\n if (files.length === 0) {\n throw new Error(`No markdown files found in: ${resolvedPath}`);\n }\n\n const valid: string[] = [];\n const invalid: InvalidFile[] = [];\n const commonIssues = new Map<string, number>();\n\n for (const file of files) {\n const basename = path.basename(file, '.md');\n const issues = this.validateFilename(basename);\n\n if (issues.length === 0) {\n valid.push(file);\n } else {\n const suggested = this.suggestRename(basename);\n\n invalid.push({\n file,\n issues,\n suggested: file.replace(basename + '.md', suggested + '.md'),\n });\n\n // Count issues\n for (const issue of issues) {\n commonIssues.set(issue, (commonIssues.get(issue) \|\| 0) + 1);\n }\n }\n }\n\n return {\n valid,\n invalid,\n statistics: {\n totalFiles: files.length,\n validCount: valid.length,\n invalidCount: invalid.length,\n commonIssues,\n },\n };\n }\n\n /\n * Validate a single filename\n /\n validateFilename(filename: string): string[] {\n const issues: string[] = [];\n const { patterns } = this.schema;\n\n // Check for uppercase (if lowercase required)\n if (patterns.lowercase && filename !== filename.toLowerCase()) {\n issues.push('Contains uppercase characters');\n }\n\n // Check for spaces (unless pattern allows spaces)\n const allowsSpaces = patterns.allowedChars.test('a b');\n if (!allowsSpaces && filename.includes(' ')) {\n issues.push('Contains spaces');\n }\n\n // Check for special characters\n const testName = patterns.lowercase\n ? filename.toLowerCase()\n : filename;\n if (!patterns.allowedChars.test(testName)) {\n issues.push(`Contains invalid characters (allowed: ${patterns.allowedChars})`);\n }\n\n // Check length\n if (filename.length > patterns.maxLength) {\n issues.push(`Exceeds maximum length (${patterns.maxLength})`);\n }\n\n // Check for consecutive separators\n const doubleSep = patterns.separator + patterns.separator;\n if (filename.includes(doubleSep)) {\n issues.push(`Contains consecutive separators (${doubleSep})`);\n }\n\n // Check for leading/trailing separators\n if (filename.startsWith(patterns.separator) \|\| filename.endsWith(patterns.separator)) {\n issues.push('Starts or ends with separator');\n }\n\n // Check for underscores when using kebab-case (skip if mixed separators allowed)\n if (!patterns.allowMixedSeparators && patterns.separator === '-' && filename.includes('_')) {\n issues.push('Contains underscores (use hyphens)');\n }\n\n // Check for mixed separators (skip if allowed)\n if (!patterns.allowMixedSeparators) {\n if (patterns.separator === '-' && filename.includes('_')) {\n issues.push('Mixed separators (hyphens and underscores)');\n }\n if (patterns.separator === '_' && filename.includes('-')) {\n issues.push('Mixed separators (underscores and hyphens)');\n }\n }\n\n return issues;\n }\n\n /\n Suggest a valid filename\n /\n suggestRename(filename: string): string {\n const { patterns } = this.schema;\n\n let suggested = filename;\n\n // Convert to lowercase if required\n if (patterns.lowercase) {\n suggested = suggested.toLowerCase();\n }\n\n // Replace spaces with separator\n suggested = suggested.replace(/\\s+/g, patterns.separator);\n\n // Replace underscores with separator (for kebab-case)\n if (patterns.separator === '-') {\n suggested = suggested.replace(/_+/g, '-');\n }\n\n // Replace hyphens with separator (for snake_case)\n if (patterns.separator === '_') {\n suggested = suggested.replace(/-+/g, '_');\n }\n\n // Remove invalid characters\n suggested = suggested.replace(/[^a-z0-9-_]/g, '');\n\n // Remove consecutive separators\n const sepRegex = new RegExp(`${patterns.separator}+`, 'g');\n suggested = suggested.replace(sepRegex, patterns.separator);\n\n // Remove leading/trailing separators\n suggested = suggested.replace(new RegExp(`^${patterns.separator}+\|${patterns.separator}+$`, 'g'), '');\n\n // Truncate if too long\n if (suggested.length > patterns.maxLength) {\n suggested = suggested.substring(0, patterns.maxLength);\n // Clean up any trailing separator after truncation\n suggested = suggested.replace(new RegExp(`${patterns.separator}+$`, 'g'), '');\n }\n\n return suggested \|\| 'untitled';\n }\n\n /\n Rename files (with safety checks)\n /\n async renameFiles(\n vaultPath: string,\n invalidFiles: InvalidFile[],\n dryRun = false\n ): Promise<Array<{ from: string; to: string; success: boolean; error?: string }>> {\n const resolvedPath = path.resolve(vaultPath);\n const results: Array<{ from: string; to: string; success: boolean; error?: string }> = [];\n\n for (const { file, suggested } of invalidFiles) {\n const fromPath = path.join(resolvedPath, file);\n const toPath = path.join(resolvedPath, suggested);\n\n // Check if target already exists\n try {\n await access(toPath);\n results.push({\n from: file,\n to: suggested,\n success: false,\n error: 'Target file already exists',\n });\n continue;\n } catch {\n // Target doesn't exist, we can proceed\n }\n\n if (dryRun) {\n results.push({\n from: file,\n to: suggested,\n success: true,\n });\n } else {\n try {\n // Ensure target directory exists\n await mkdir(path.dirname(toPath), { recursive: true });\n await rename(fromPath, toPath);\n results.push({\n from: file,\n to: suggested,\n success: true,\n });\n } catch (error) {\n results.push({\n from: file,\n to: suggested,\n success: false,\n error: error instanceof Error ? error.message : 'Unknown error',\n });\n }\n }\n }\n\n return results;\n }\n\n /\n Get current schema\n /\n getSchema(): NamingSchema {\n return this.schema;\n }\n\n /\n Generate report\n /\n generateReport(result: ValidationResult): string {\n const lines: string[] = [];\n\n lines.push('# File Naming Validation Report\\n');\n lines.push(`Generated: ${new Date().toISOString()}\\n`);\n lines.push(`Schema: ${this.schema.name}\\n`);\n lines.push('');\n\n lines.push('## Summary\\n');\n lines.push(`\| Metric \| Value \|`);\n lines.push(`\|--------\|-------\|`);\n lines.push(`\| Total Files \| ${result.statistics.totalFiles} \|`);\n lines.push(`\| Valid \| ${result.statistics.validCount} \|`);\n lines.push(`\| Invalid \| ${result.statistics.invalidCount} \|`);\n lines.push(`\| Compliance \| ${((result.statistics.validCount / result.statistics.totalFiles) 100).toFixed(1)}% \|`);\n lines.push('');\n\n if (result.statistics.commonIssues.size > 0) {\n lines.push('## Common Issues\\n');\n const sortedIssues = [...result.statistics.commonIssues.entries()]\n .sort((a, b) => b[1] - a[1]);\n for (const [issue, count] of sortedIssues) {\n lines.push(`- ${issue}: ${count} files`);\n }\n lines.push('');\n }\n\n if (result.invalid.length > 0) {\n lines.push('## Files to Rename\\n');\n lines.push('\| Current \| Suggested \| Issues \|');\n lines.push('\|---------\|-----------\|--------\|');\n for (const { file, suggested, issues } of result.invalid.slice(0, 50)) {\n lines.push(`\| \\`${file}\\` \| \\`${suggested}\\` \| ${issues.join(', ')} \|`);\n }\n if (result.invalid.length > 50) {\n lines.push(`\\n... and ${result.invalid.length - 50} more`);\n }\n }\n\n return lines.join('\\n');\n }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createValidateNamesCommand(): Command {\n const command = new Command('validate-names')\n .description('Validate file naming schema')\n .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n .option('--schema <name>', 'Naming schema (kebab, snake, obsidian)', 'kebab')\n .option('--fix', 'Auto-rename invalid files')\n .option('--dry-run', 'Show what would be renamed without making changes')\n .option('-o, --output <file>', 'Output file for report')\n .option('--json', 'Output as JSON')\n .option('-v, --verbose', 'Show detailed output')\n .action(async (vaultPath: string, options: ValidateNamesOptions) => {\n const validator = new NameValidator(options.schema \|\| 'kebab');\n\n console.log(chalk.cyan(`\\nValidating file names (${validator.getSchema().name})...\\n`));\n\n try {\n const result = await validator.validateVault(vaultPath, options);\n\n if (options.json) {\n const jsonResult = {\n ...result,\n statistics: {\n ...result.statistics,\n commonIssues: Object.fromEntries(result.statistics.commonIssues),\n },\n };\n\n if (options.output) {\n await writeFile(options.output, JSON.stringify(jsonResult, null, 2));\n console.log(chalk.green(`Results written to: ${options.output}`));\n } else {\n console.log(JSON.stringify(jsonResult, null, 2));\n }\n } else {\n // Display summary\n const compliance = (result.statistics.validCount / result.statistics.totalFiles) * 100;\n const complianceColor = compliance === 100 ? chalk.green : compliance >= 80 ? chalk.yellow : chalk.red;\n\n console.log(chalk.bold('Summary:'));\n console.log(chalk.white(` Total Files: ${result.statistics.totalFiles}`));\n console.log(chalk.green(` Valid: ${result.statistics.validCount}`));\n console.log(chalk.red(` Invalid: ${result.statistics.invalidCount}`));\n console.log(complianceColor(` Compliance: ${compliance.toFixed(1)}%`));\n console.log('');\n\n if (result.statistics.commonIssues.size > 0) {\n console.log(chalk.bold('Common Issues:'));\n const sortedIssues = [...result.statistics.commonIssues.entries()]\n .sort((a, b) => b[1] - a[1]);\n for (const [issue, count] of sortedIssues) {\n console.log(chalk.yellow(` ${count}x ${issue}`));\n }\n console.log('');\n }\n\n if (result.invalid.length > 0 && (options.verbose \|\| options.fix \|\| options.dryRun)) {\n console.log(chalk.bold('Files to Rename:'));\n for (const { file, suggested, issues } of result.invalid.slice(0, options.verbose ? 50 : 10)) {\n console.log(chalk.red(` ${file}`));\n console.log(chalk.green(` -> ${suggested}`));\n if (options.verbose) {\n console.log(chalk.gray(` Issues: ${issues.join(', ')}`));\n }\n }\n if (result.invalid.length > (options.verbose ? 50 : 10)) {\n console.log(chalk.gray(` ... and ${result.invalid.length - (options.verbose ? 50 : 10)} more`));\n }\n console.log('');\n }\n\n // Handle fix/dry-run\n if (options.fix \|\| options.dryRun) {\n const action = options.dryRun ? 'Preview' : 'Rename';\n console.log(chalk.bold(`${action}ing files...`));\n\n const renameResults = await validator.renameFiles(\n vaultPath,\n result.invalid,\n options.dryRun \|\| false\n );\n\n const success = renameResults.filter(r => r.success);\n const failed = renameResults.filter(r => !r.success);\n\n if (options.dryRun) {\n console.log(chalk.cyan(` Would rename ${success.length} files`));\n } else {\n console.log(chalk.green(` Renamed ${success.length} files`));\n }\n\n if (failed.length > 0) {\n console.log(chalk.red(` Failed: ${failed.length} files`));\n if (options.verbose) {\n for (const { from, to, error } of failed) {\n console.log(chalk.red(` ${from} -> ${to}: ${error}`));\n }\n }\n }\n console.log('');\n }\n\n // Write report if output specified\n if (options.output && !options.json) {\n const report = validator.generateReport(result);\n await writeFile(options.output, report);\n console.log(chalk.green(`Report written to: ${options.output}`));\n }\n\n // Show next steps\n if (result.invalid.length > 0 && !options.fix) {\n console.log(chalk.bold('Next Steps:'));\n console.log(chalk.gray(' 1. 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package/dist/graphql/server.js CHANGED Viewed

@@ -2,7 +2,7 @@ import { createServer } from "http";
 import { existsSync, readFileSync } from "fs";
 import { join } from "path";
 import { useServer } from "../node_modules/graphql-ws/lib/use/ws.js";
-import { b as browserExports } from "../_virtual/browser.js";
+import { WebSocketServer } from "ws";
 import { createLogger } from "../utils/logger.js";
 import { createContextFactory } from "./context.js";
 import { customScalars } from "./scalars.js";
@@ -92,7 +92,7 @@ function createGraphQLServer(config) {
     yoga.handle(req, res);
   });
   if (enableSubscriptions) {
-    wsServer = new browserExports.WebSocketServer({
+    wsServer = new WebSocketServer({
       server: httpServer,
       path: graphqlPath
     });

package/dist/graphql/server.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"server.js","sources":["../../src/graphql/server.ts"],"sourcesContent":["/*\n GraphQL Server Setup\n \n Provides GraphQL server configuration using graphql-yoga with WebSocket\n * subscriptions, CORS configuration, health checks, and GraphiQL playground.\n \n @module graphql/server\n /\n\nimport { createServer, type IncomingMessage, type ServerResponse, type Server } from 'http';\nimport { readFileSync, existsSync } from 'fs';\nimport { join } from 'path';\nimport { createYoga, type YogaServerInstance } from 'graphql-yoga';\nimport { useServer } from 'graphql-ws/lib/use/ws';\nimport { WebSocketServer } from 'ws';\nimport { makeExecutableSchema } from '@graphql-tools/schema';\n\nimport { createLogger } from '../utils/index.js';\nimport { createContextFactory, type GraphQLContext, type ContextFactoryConfig } from './context.js';\nimport { customScalars } from './scalars.js';\nimport type { KnowledgeGraphDatabase } from '../core/database.js';\nimport type { AdvancedCache } from '../caching/lru-cache.js';\nimport type { ServiceManager } from '../services/index.js';\n\nconst logger = createLogger('graphql-server');\n\n// ============================================================================\n// Types\n// ============================================================================\n\n/\n GraphQL server configuration options\n /\nexport interface GraphQLServerConfig {\n /* Port to listen on /\n port: number;\n /* Host to bind to /\n host?: string;\n /* Path for GraphQL endpoint /\n graphqlPath?: string;\n /* Path for health check endpoint /\n healthPath?: string;\n /* Enable GraphiQL playground /\n enableGraphiQL?: boolean;\n /* Enable WebSocket subscriptions /\n enableSubscriptions?: boolean;\n /* CORS configuration /\n cors?: CorsConfig;\n /* Database instance /\n database: KnowledgeGraphDatabase;\n /* Cache instance /\n cache: AdvancedCache<unknown>;\n /* Service manager instance /\n serviceManager: ServiceManager;\n /* API key for authentication (optional) /\n apiKey?: string;\n /* Whether to require authentication /\n requireAuth?: boolean;\n /* Custom resolvers (merged with defaults) /\n resolvers?: Record<string, unknown>;\n /* Custom schema path (default: src/graphql/schema.graphql) /\n schemaPath?: string;\n}\n\n/\n CORS configuration options\n /\nexport interface CorsConfig {\n /* Allowed origins (string or array) /\n origin?: string \| string[] \| boolean;\n /* Allowed methods /\n methods?: string[];\n /* Allowed headers /\n allowedHeaders?: string[];\n /* Exposed headers /\n exposedHeaders?: string[];\n /* Allow credentials /\n credentials?: boolean;\n /* Max age for preflight cache (seconds) /\n maxAge?: number;\n}\n\n/\n Health check response\n /\nexport interface HealthCheckResponse {\n status: 'healthy' \| 'degraded' \| 'unhealthy';\n timestamp: string;\n uptime: number;\n version: string;\n components: {\n database: boolean;\n cache: boolean;\n services: boolean;\n };\n}\n\n/\n GraphQL server instance with lifecycle methods\n /\nexport interface GraphQLServerInstance {\n /* Start the server /\n start(): Promise<void>;\n /* Stop the server gracefully /\n stop(): Promise<void>;\n /* Get the HTTP server instance /\n getHttpServer(): Server;\n /* Get the Yoga instance /\n getYoga(): YogaServerInstance<Record<string, unknown>, GraphQLContext>;\n /* Check if server is running /\n isRunning(): boolean;\n /* Get server URL /\n getUrl(): string;\n}\n\n// ============================================================================\n// Server Factory\n// ============================================================================\n\n/\n Create a GraphQL server with all configured features\n \n @param config - Server configuration\n * @returns GraphQL server instance\n \n @example\n * ```typescript\n * const server = createGraphQLServer({\n * port: 4000,\n * database,\n * cache,\n * serviceManager,\n * enableGraphiQL: true,\n * enableSubscriptions: true,\n * cors: {\n * origin: ['http://localhost:3000'],\n * credentials: true,\n * },\n * });\n \n await server.start();\n * console.log(`GraphQL server running at ${server.getUrl()}`);\n * ```\n /\nexport function createGraphQLServer(config: GraphQLServerConfig): GraphQLServerInstance {\n const {\n port,\n host = '0.0.0.0',\n graphqlPath = '/graphql',\n healthPath = '/health',\n enableGraphiQL = true,\n enableSubscriptions = true,\n cors = {},\n database,\n cache,\n serviceManager,\n apiKey,\n requireAuth = false,\n resolvers: customResolvers = {},\n schemaPath,\n } = config;\n\n let httpServer: Server \| null = null;\n let wsServer: WebSocketServer \| null = null;\n let isServerRunning = false;\n const startTime = Date.now();\n\n // Load schema\n const typeDefs = loadSchema(schemaPath);\n\n // Create resolvers with custom scalars\n const resolvers = {\n ...customScalars,\n ...createDefaultResolvers(),\n ...customResolvers,\n };\n\n // Create executable schema\n const schema = makeExecutableSchema({\n typeDefs,\n resolvers,\n });\n\n // Create context factory\n const contextFactory = createContextFactory({\n database,\n cache,\n serviceManager,\n apiKey,\n requireAuth,\n });\n\n // Create CORS configuration\n const corsConfig = buildCorsConfig(cors);\n\n // Create Yoga instance\n const yoga = createYoga<Record<string, unknown>, GraphQLContext>({\n schema,\n context: contextFactory,\n graphqlEndpoint: graphqlPath,\n graphiql: enableGraphiQL\n ? {\n title: 'Knowledge Graph API',\n defaultQuery: DEFAULT_QUERY,\n subscriptionsProtocol: 'WS',\n }\n : false,\n cors: {\n origin: Array.isArray(corsConfig.origin) ? corsConfig.origin : corsConfig.origin === true ? '' : [],\n methods: corsConfig.methods,\n allowedHeaders: corsConfig.allowedHeaders,\n exposedHeaders: corsConfig.exposedHeaders,\n credentials: corsConfig.credentials,\n maxAge: corsConfig.maxAge,\n },\n logging: {\n debug: (...args) => logger.debug('GraphQL', { args }),\n info: (...args) => logger.info(args.join(' ')),\n warn: (...args) => logger.warn(args.join(' ')),\n error: (...args) => logger.error(args.join(' ')),\n },\n maskedErrors: process.env.NODE_ENV === 'production',\n landingPage: false,\n });\n\n // Create HTTP server with health check\n httpServer = createServer(async (req: IncomingMessage, res: ServerResponse) => {\n // Handle health check\n if (req.url === healthPath && req.method === 'GET') {\n const health = await getHealthCheck(database, cache, serviceManager, startTime);\n const statusCode = health.status === 'healthy' ? 200 : health.status === 'degraded' ? 200 : 503;\n\n res.writeHead(statusCode, {\n 'Content-Type': 'application/json',\n 'Cache-Control': 'no-cache, no-store, must-revalidate',\n });\n res.end(JSON.stringify(health));\n return;\n }\n\n // Handle CORS preflight\n if (req.method === 'OPTIONS') {\n handleCorsPreFlight(req, res, corsConfig);\n return;\n }\n\n // Delegate to Yoga - yoga.handle returns void and writes directly to response\n yoga.handle(req, res);\n });\n\n // Setup WebSocket server for subscriptions\n if (enableSubscriptions) {\n wsServer = new WebSocketServer({\n server: httpServer,\n path: graphqlPath,\n });\n\n useServer(\n {\n schema,\n context: async (ctx) => {\n // Create context from WebSocket connection\n const request = new Request(`ws://${host}:${port}${graphqlPath}`, {\n headers: ctx.connectionParams as Record<string, string> \| undefined,\n });\n return contextFactory({ request });\n },\n onConnect: () => {\n logger.info('WebSocket client connected');\n return true;\n },\n onDisconnect: (ctx, code, reason) => {\n logger.info('WebSocket client disconnected', { code, reason: reason?.toString() });\n },\n onError: (ctx, message, errors) => {\n logger.error('WebSocket error', undefined, { message, errors });\n },\n },\n wsServer\n );\n\n logger.info('WebSocket subscriptions enabled', { path: graphqlPath });\n }\n\n // Return server instance\n return {\n async start(): Promise<void> {\n if (isServerRunning) {\n logger.warn('Server already running');\n return;\n }\n\n return new Promise((resolve, reject) => {\n httpServer!.listen(port, host, () => {\n isServerRunning = true;\n logger.info('GraphQL server started', {\n url: `http://${host}:${port}${graphqlPath}`,\n graphiql: enableGraphiQL ? `http://${host}:${port}${graphqlPath}` : 'disabled',\n health: `http://${host}:${port}${healthPath}`,\n subscriptions: enableSubscriptions ? `ws://${host}:${port}${graphqlPath}` : 'disabled',\n });\n resolve();\n });\n\n httpServer!.on('error', (error) => {\n logger.error('Server error', error);\n reject(error);\n });\n });\n },\n\n async stop(): Promise<void> {\n if (!isServerRunning) {\n return;\n }\n\n logger.info('Stopping GraphQL server...');\n\n // Close WebSocket server\n if (wsServer) {\n await new Promise<void>((resolve) => {\n wsServer!.close(() => {\n logger.debug('WebSocket server closed');\n resolve();\n });\n });\n }\n\n // Close HTTP server\n await new Promise<void>((resolve, reject) => {\n httpServer!.close((error) => {\n if (error) {\n reject(error);\n } else {\n isServerRunning = false;\n logger.info('GraphQL server stopped');\n resolve();\n }\n });\n });\n },\n\n getHttpServer(): Server {\n return httpServer!;\n },\n\n getYoga() {\n return yoga;\n },\n\n isRunning(): boolean {\n return isServerRunning;\n },\n\n getUrl(): string {\n return `http://${host}:${port}${graphqlPath}`;\n },\n };\n}\n\n// ============================================================================\n// Schema Loading\n// ============================================================================\n\n/*\n Load GraphQL schema from file\n /\nfunction loadSchema(customPath?: string): string {\n // Try custom path first\n if (customPath && existsSync(customPath)) {\n logger.debug('Loading schema from custom path', { path: customPath });\n return readFileSync(customPath, 'utf-8');\n }\n\n // Schema search paths (relative to cwd)\n const searchPaths = [\n join(process.cwd(), 'src/graphql/schema.graphql'),\n join(process.cwd(), 'graphql/schema.graphql'),\n join(process.cwd(), 'schema.graphql'),\n // For dist builds\n join(process.cwd(), 'dist/graphql/schema.graphql'),\n ];\n\n for (const schemaPath of searchPaths) {\n if (existsSync(schemaPath)) {\n logger.debug('Loading schema from path', { path: schemaPath });\n return readFileSync(schemaPath, 'utf-8');\n }\n }\n\n throw new Error(\n `GraphQL schema not found. Tried: ${[customPath, ...searchPaths].filter(Boolean).join(', ')}`\n );\n}\n\n// ============================================================================\n// Default Resolvers\n// ============================================================================\n\n/\n Create default resolvers for system queries\n /\nfunction createDefaultResolvers(): Record<string, unknown> {\n return {\n Query: {\n // System health query\n health: async (\n _parent: unknown,\n _args: unknown,\n context: GraphQLContext\n ): Promise<{\n status: string;\n components: { database: boolean; cache: boolean; agents: boolean; vectorStore: boolean };\n uptime: number;\n requestCount: number;\n toolCount: number;\n }> => {\n const { services } = context;\n const dbHealthy = !!services.database;\n const cacheHealthy = !!services.cache;\n\n return {\n status: dbHealthy && cacheHealthy ? 'HEALTHY' : 'DEGRADED',\n components: {\n database: dbHealthy,\n cache: cacheHealthy,\n agents: true, // Would check agent registry\n vectorStore: false, // Not implemented yet\n },\n uptime: process.uptime() 1000,\n requestCount: 0, // Would track in context\n toolCount: 0, // Would count MCP tools\n };\n },\n\n // Version info query\n version: (): {\n version: string;\n buildTime: Date \| null;\n gitCommit: string \| null;\n nodeVersion: string;\n schemaVersion: string;\n } => ({\n version: process.env.npm_package_version ?? '0.0.0',\n buildTime: null,\n gitCommit: process.env.GIT_COMMIT ?? null,\n nodeVersion: process.version,\n schemaVersion: '1.0.0',\n }),\n },\n\n // Subscription resolvers would be added here\n Subscription: {},\n };\n}\n\n// ============================================================================\n// CORS Helpers\n// ============================================================================\n\n/*\n Build CORS configuration for Yoga\n /\nfunction buildCorsConfig(cors: CorsConfig): {\n origin: string[] \| boolean;\n methods: string[];\n allowedHeaders: string[];\n exposedHeaders: string[];\n credentials: boolean;\n maxAge: number;\n} {\n const origin = cors.origin === true\n ? true\n : cors.origin === false\n ? false\n : Array.isArray(cors.origin)\n ? cors.origin\n : cors.origin\n ? [cors.origin]\n : ['http://localhost:3000', 'http://localhost:5173']; // Default dashboard origins\n\n return {\n origin: origin === false ? [] : origin,\n methods: cors.methods ?? ['GET', 'POST', 'OPTIONS'],\n allowedHeaders: cors.allowedHeaders ?? ['Content-Type', 'Authorization', 'X-Request-ID'],\n exposedHeaders: cors.exposedHeaders ?? ['X-Request-ID'],\n credentials: cors.credentials ?? true,\n maxAge: cors.maxAge ?? 86400, // 24 hours\n };\n}\n\n/\n Handle CORS preflight request\n /\nfunction handleCorsPreFlight(\n req: import('http').IncomingMessage,\n res: import('http').ServerResponse,\n corsConfig: ReturnType<typeof buildCorsConfig>\n): void {\n const origin = req.headers.origin;\n\n if (origin && (corsConfig.origin === true \|\| (Array.isArray(corsConfig.origin) && corsConfig.origin.includes(origin)))) {\n res.setHeader('Access-Control-Allow-Origin', origin);\n }\n\n res.setHeader('Access-Control-Allow-Methods', corsConfig.methods.join(', '));\n res.setHeader('Access-Control-Allow-Headers', corsConfig.allowedHeaders.join(', '));\n res.setHeader('Access-Control-Max-Age', corsConfig.maxAge.toString());\n\n if (corsConfig.credentials) {\n res.setHeader('Access-Control-Allow-Credentials', 'true');\n }\n\n res.writeHead(204);\n res.end();\n}\n\n// ============================================================================\n// Health Check\n// ============================================================================\n\n/\n Get health check response\n */\nasync function getHealthCheck(\n database: KnowledgeGraphDatabase,\n cache: AdvancedCache<unknown>,\n serviceManager: ServiceManager,\n startTime: number\n): Promise<HealthCheckResponse> {\n let dbHealthy = false;\n let cacheHealthy = false;\n let servicesHealthy = false;\n\n try {\n // Check database\n const db = database.getDatabase();\n db.prepare('SELECT 1').get();\n dbHealthy = true;\n } catch (error) {\n logger.error('Database health check failed', error instanceof Error ? error : undefined);\n }\n\n try {\n // Check cache\n cache.set('_health_check', Date.now(), { ttl: 1000 });\n const value = cache.get('_health_check');\n cacheHealthy = value !== undefined;\n cache.delete('_health_check');\n } catch (error) {\n logger.error('Cache health check failed', error instanceof Error ? error : undefined);\n }\n\n try {\n // Check services\n const states = serviceManager.getAllStates();\n const runningCount = Array.from(states.values()).filter((s) => s.status === 'running').length;\n servicesHealthy = runningCount >= 0; // At least no errors\n } catch (error) {\n logger.error('Services health check failed', error instanceof Error ? error : undefined);\n }\n\n const allHealthy = dbHealthy && cacheHealthy && servicesHealthy;\n const anyHealthy = dbHealthy \|\| cacheHealthy \|\| servicesHealthy;\n\n return {\n status: allHealthy ? 'healthy' : anyHealthy ? 'degraded' : 'unhealthy',\n timestamp: new Date().toISOString(),\n uptime: Date.now() - startTime,\n version: process.env.npm_package_version ?? 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1	+ {"version":3,"file":"server.js","sources":["../../src/graphql/server.ts"],"sourcesContent":["/*\n GraphQL Server Setup\n \n Provides GraphQL server configuration using graphql-yoga with WebSocket\n * subscriptions, CORS configuration, health checks, and GraphiQL playground.\n \n @module graphql/server\n /\n\nimport { createServer, type IncomingMessage, type ServerResponse, type Server } from 'http';\nimport { readFileSync, existsSync } from 'fs';\nimport { join } from 'path';\nimport { createYoga, type YogaServerInstance } from 'graphql-yoga';\nimport { useServer } from 'graphql-ws/lib/use/ws';\nimport { WebSocketServer } from 'ws';\nimport { makeExecutableSchema } from '@graphql-tools/schema';\n\nimport { createLogger } from '../utils/index.js';\nimport { createContextFactory, type GraphQLContext, type ContextFactoryConfig } from './context.js';\nimport { customScalars } from './scalars.js';\nimport type { KnowledgeGraphDatabase } from '../core/database.js';\nimport type { AdvancedCache } from '../caching/lru-cache.js';\nimport type { ServiceManager } from '../services/index.js';\n\nconst logger = createLogger('graphql-server');\n\n// ============================================================================\n// Types\n// ============================================================================\n\n/\n GraphQL server configuration options\n /\nexport interface GraphQLServerConfig {\n /* Port to listen on /\n port: number;\n /* Host to bind to /\n host?: string;\n /* Path for GraphQL endpoint /\n graphqlPath?: string;\n /* Path for health check endpoint /\n healthPath?: string;\n /* Enable GraphiQL playground /\n enableGraphiQL?: boolean;\n /* Enable WebSocket subscriptions /\n enableSubscriptions?: boolean;\n /* CORS configuration /\n cors?: CorsConfig;\n /* Database instance /\n database: KnowledgeGraphDatabase;\n /* Cache instance /\n cache: AdvancedCache<unknown>;\n /* Service manager instance /\n serviceManager: ServiceManager;\n /* API key for authentication (optional) /\n apiKey?: string;\n /* Whether to require authentication /\n requireAuth?: boolean;\n /* Custom resolvers (merged with defaults) /\n resolvers?: Record<string, unknown>;\n /* Custom schema path (default: src/graphql/schema.graphql) /\n schemaPath?: string;\n}\n\n/\n CORS configuration options\n /\nexport interface CorsConfig {\n /* Allowed origins (string or array) /\n origin?: string \| string[] \| boolean;\n /* Allowed methods /\n methods?: string[];\n /* Allowed headers /\n allowedHeaders?: string[];\n /* Exposed headers /\n exposedHeaders?: string[];\n /* Allow credentials /\n credentials?: boolean;\n /* Max age for preflight cache (seconds) /\n maxAge?: number;\n}\n\n/\n Health check response\n /\nexport interface HealthCheckResponse {\n status: 'healthy' \| 'degraded' \| 'unhealthy';\n timestamp: string;\n uptime: number;\n version: string;\n components: {\n database: boolean;\n cache: boolean;\n services: boolean;\n };\n}\n\n/\n GraphQL server instance with lifecycle methods\n /\nexport interface GraphQLServerInstance {\n /* Start the server /\n start(): Promise<void>;\n /* Stop the server gracefully /\n stop(): Promise<void>;\n /* Get the HTTP server instance /\n getHttpServer(): Server;\n /* Get the Yoga instance /\n getYoga(): YogaServerInstance<Record<string, unknown>, GraphQLContext>;\n /* Check if server is running /\n isRunning(): boolean;\n /* Get server URL /\n getUrl(): string;\n}\n\n// ============================================================================\n// Server Factory\n// ============================================================================\n\n/\n Create a GraphQL server with all configured features\n \n @param config - Server configuration\n * @returns GraphQL server instance\n \n @example\n * ```typescript\n * const server = createGraphQLServer({\n * port: 4000,\n * database,\n * cache,\n * serviceManager,\n * enableGraphiQL: true,\n * enableSubscriptions: true,\n * cors: {\n * origin: ['http://localhost:3000'],\n * credentials: true,\n * },\n * });\n \n await server.start();\n * console.log(`GraphQL server running at ${server.getUrl()}`);\n * ```\n /\nexport function createGraphQLServer(config: GraphQLServerConfig): GraphQLServerInstance {\n const {\n port,\n host = '0.0.0.0',\n graphqlPath = '/graphql',\n healthPath = '/health',\n enableGraphiQL = true,\n enableSubscriptions = true,\n cors = {},\n database,\n cache,\n serviceManager,\n apiKey,\n requireAuth = false,\n resolvers: customResolvers = {},\n schemaPath,\n } = config;\n\n let httpServer: Server \| null = null;\n let wsServer: WebSocketServer \| null = null;\n let isServerRunning = false;\n const startTime = Date.now();\n\n // Load schema\n const typeDefs = loadSchema(schemaPath);\n\n // Create resolvers with custom scalars\n const resolvers = {\n ...customScalars,\n ...createDefaultResolvers(),\n ...customResolvers,\n };\n\n // Create executable schema\n const schema = makeExecutableSchema({\n typeDefs,\n resolvers,\n });\n\n // Create context factory\n const contextFactory = createContextFactory({\n database,\n cache,\n serviceManager,\n apiKey,\n requireAuth,\n });\n\n // Create CORS configuration\n const corsConfig = buildCorsConfig(cors);\n\n // Create Yoga instance\n const yoga = createYoga<Record<string, unknown>, GraphQLContext>({\n schema,\n context: contextFactory,\n graphqlEndpoint: graphqlPath,\n graphiql: enableGraphiQL\n ? {\n title: 'Knowledge Graph API',\n defaultQuery: DEFAULT_QUERY,\n subscriptionsProtocol: 'WS',\n }\n : false,\n cors: {\n origin: Array.isArray(corsConfig.origin) ? corsConfig.origin : corsConfig.origin === true ? 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package/dist/mcp-server/tools/audit/index.d.ts CHANGED Viewed

@@ -40,6 +40,9 @@ export declare const auditToolDefinitions: {
         idempotentHint?: boolean | undefined;
         openWorldHint?: boolean | undefined;
     } | undefined;
+    execution?: {
+        taskSupport?: "required" | "optional" | "forbidden" | undefined;
+    } | undefined;
     _meta?: {
         [x: string]: unknown;
     } | undefined;
@@ -47,6 +50,7 @@ export declare const auditToolDefinitions: {
         src: string;
         mimeType?: string | undefined;
         sizes?: string[] | undefined;
+        theme?: "light" | "dark" | undefined;
     }[] | undefined;
     title?: string | undefined;
 }[];

package/dist/mcp-server/tools/audit/index.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/audit/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAGH,OAAO,EACL,cAAc,EACd,uBAAuB,EACvB,KAAK,gBAAgB,GACtB,MAAM,YAAY,CAAC;AAGpB,OAAO,EACL,mBAAmB,EACnB,4BAA4B,EAC5B,mBAAmB,EACnB,KAAK,qBAAqB,GAC3B,MAAM,iBAAiB,CAAC;AAGzB,OAAO,EACL,cAAc,EACd,uBAAuB,EACvB,iBAAiB,EACjB,KAAK,gBAAgB,GACtB,MAAM,WAAW,CAAC;AAMnB;;GAEG;AACH,eAAO,MAAM,oBAAoB~~;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;~~GAIhC,CAAC"}
1	+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/audit/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAGH,OAAO,EACL,cAAc,EACd,uBAAuB,EACvB,KAAK,gBAAgB,GACtB,MAAM,YAAY,CAAC;AAGpB,OAAO,EACL,mBAAmB,EACnB,4BAA4B,EAC5B,mBAAmB,EACnB,KAAK,qBAAqB,GAC3B,MAAM,iBAAiB,CAAC;AAGzB,OAAO,EACL,cAAc,EACd,uBAAuB,EACvB,iBAAiB,EACjB,KAAK,gBAAgB,GACtB,MAAM,WAAW,CAAC;AAMnB;;GAEG;AACH,eAAO,MAAM,oBAAoB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAIhC,CAAC"}

package/dist/node_modules/@typescript-eslint/project-service/dist/index.js CHANGED Viewed

@@ -1,4 +1,4 @@
-import { __exports as dist } from "../../../../_virtual/index8.js";
+import { __exports as dist } from "../../../../_virtual/index7.js";
 import { __require as requireCreateProjectService } from "./createProjectService.js";
 var hasRequiredDist;
 function requireDist() {

package/dist/node_modules/debug/src/browser.js CHANGED Viewed

@@ -1,4 +1,4 @@
-import { __module as browser } from "../../../_virtual/browser2.js";
+import { __module as browser } from "../../../_virtual/browser.js";
 import { __require as requireCommon } from "./common.js";
 var hasRequiredBrowser;
 function requireBrowser() {

package/dist/node_modules/fdir/dist/index.js CHANGED Viewed

@@ -1,6 +1,6 @@
-import { __exports as dist } from "../../../_virtual/index11.js";
+import { __exports as dist } from "../../../_virtual/index10.js";
 import path__default from "path";
-import fs from "fs";
+import require$$1 from "fs";
 import { __require as requirePicomatch } from "../../picomatch/index.js";
 var hasRequiredDist;
 function requireDist() {
@@ -27,7 +27,7 @@ function requireDist() {
     enumerable: true
   }) : target, mod));
   const path = __toESM(path__default);
-  const fs$1 = __toESM(fs);
+  const fs = __toESM(require$$1);
   function cleanPath(path$1) {
     let normalized = (0, path.normalize)(path$1);
     if (normalized.length > 1 && normalized[normalized.length - 1] === path.sep) normalized = normalized.substring(0, normalized.length - 1);
@@ -139,11 +139,11 @@ function requireDist() {
     return options.group ? groupFiles : empty;
   }
   const resolveSymlinksAsync = function(path$1, state, callback$1) {
-    const { queue, fs: fs$12, options: { suppressErrors } } = state;
+    const { queue, fs: fs$1, options: { suppressErrors } } = state;
     queue.enqueue();
-    fs$12.realpath(path$1, (error, resolvedPath) => {
+    fs$1.realpath(path$1, (error, resolvedPath) => {
       if (error) return queue.dequeue(suppressErrors ? null : error, state);
-      fs$12.stat(resolvedPath, (error$1, stat) => {
+      fs$1.stat(resolvedPath, (error$1, stat) => {
         if (error$1) return queue.dequeue(suppressErrors ? null : error$1, state);
         if (stat.isDirectory() && isRecursive(path$1, resolvedPath, state)) return queue.dequeue(null, state);
         callback$1(stat, resolvedPath);
@@ -152,11 +152,11 @@ function requireDist() {
     });
   };
   const resolveSymlinks = function(path$1, state, callback$1) {
-    const { queue, fs: fs$12, options: { suppressErrors } } = state;
+    const { queue, fs: fs$1, options: { suppressErrors } } = state;
     queue.enqueue();
     try {
-      const resolvedPath = fs$12.realpathSync(path$1);
-      const stat = fs$12.statSync(resolvedPath);
+      const resolvedPath = fs$1.realpathSync(path$1);
+      const stat = fs$1.statSync(resolvedPath);
       if (stat.isDirectory() && isRecursive(path$1, resolvedPath, state)) return;
       callback$1(stat, resolvedPath);
     } catch (e) {
@@ -226,22 +226,22 @@ function requireDist() {
   const walkAsync = (state, crawlPath, directoryPath, currentDepth, callback$1) => {
     state.queue.enqueue();
     if (currentDepth < 0) return state.queue.dequeue(null, state);
-    const { fs: fs$12 } = state;
+    const { fs: fs$1 } = state;
     state.visited.push(crawlPath);
     state.counts.directories++;
-    fs$12.readdir(crawlPath || ".", readdirOpts, (error, entries = []) => {
+    fs$1.readdir(crawlPath || ".", readdirOpts, (error, entries = []) => {
       callback$1(entries, directoryPath, currentDepth);
       state.queue.dequeue(state.options.suppressErrors ? null : error, state);
     });
   };
   const walkSync = (state, crawlPath, directoryPath, currentDepth, callback$1) => {
-    const { fs: fs$12 } = state;
+    const { fs: fs$1 } = state;
     if (currentDepth < 0) return;
     state.visited.push(crawlPath);
     state.counts.directories++;
     let entries = [];
     try {
-      entries = fs$12.readdirSync(crawlPath || ".", readdirOpts);
+      entries = fs$1.readdirSync(crawlPath || ".", readdirOpts);
     } catch (e) {
       if (!state.options.suppressErrors) throw e;
     }
@@ -324,7 +324,7 @@ function requireDist() {
         symlinks: /* @__PURE__ */ new Map(),
         visited: [""].slice(0, 0),
         controller: new Aborter(),
-        fs: options.fs || fs$1
+        fs: options.fs || fs
       };
       this.joinPath = build$7(this.root, options);
       this.pushDirectory = build$6(this.root, options);