@weavelogic/knowledge-graph-agent 0.7.4 → 0.8.0

package/dist/_virtual/__vite-browser-external.js

@@ -1,5 +1,5 @@
-const sharp = {};
+const __viteBrowserExternal = {};
 export {
-  sharp as default
+  __viteBrowserExternal as default
 };
 //# sourceMappingURL=__vite-browser-external.js.map

package/dist/_virtual/__vite-browser-external.js.map

@@ -1 +1 @@
-{"version":3,"file":"__vite-browser-external.js","sources":["../../__vite-browser-external"],"sourcesContent":["export default {}"],"names":[],"mappings":"AAAA,MAAA,QAAe,CAAA;"}
+{"version":3,"file":"__vite-browser-external.js","sources":["../../__vite-browser-external"],"sourcesContent":["export default {}"],"names":[],"mappings":"AAAA,MAAA,wBAAe,CAAA;"}

package/dist/_virtual/browser.js

@@ -1,6 +1,5 @@
-import { __require as requireBrowser } from "../node_modules/ws/browser.js";
-var browserExports = requireBrowser();
+var browser = { exports: {} };
 export {
-  browserExports as b
+  browser as __module
 };
 //# sourceMappingURL=browser.js.map

package/dist/_virtual/browser.js.map

@@ -1 +1 @@
-{"version":3,"file":"browser.js","sources":[],"sourcesContent":[],"names":[],"mappings":";;"}
+{"version":3,"file":"browser.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}

package/dist/_virtual/index10.js

@@ -1,7 +1,5 @@
-import { getAugmentedNamespace } from "./_commonjsHelpers.js";
-import * as index from "../node_modules/onnxruntime-common/dist/lib/index.js";
-const require$$0 = /* @__PURE__ */ getAugmentedNamespace(index);
+var dist = {};
 export {
-  require$$0 as default
+  dist as __exports
 };
 //# sourceMappingURL=index10.js.map

package/dist/_virtual/index10.js.map

@@ -1 +1 @@
-{"version":3,"file":"index10.js","sources":[],"sourcesContent":[],"names":[],"mappings":";;;"}
+{"version":3,"file":"index10.js","sources":[],"sourcesContent":[],"names":[],"mappings":";"}

package/dist/_virtual/index11.js

@@ -1,5 +1,5 @@
-var dist = {};
+var lib = {};
 export {
-  dist as __exports
+  lib as __exports
 };
 //# sourceMappingURL=index11.js.map

package/dist/cli/commands/hive-mind/add-frontmatter.js

@@ -2,7 +2,7 @@ import { Command } from "commander";
 import chalk from "chalk";
 import * as path from "path";
 import { writeFile, readFile } from "fs/promises";
-import { glob } from "fast-glob";
+import fg from "fast-glob";
 import matter from "gray-matter";
 import * as yaml from "js-yaml";
 class FrontmatterEnricher {
@@ -11,7 +11,7 @@ class FrontmatterEnricher {
    */
   async enrichVault(vaultPath, options = {}) {
     const resolvedPath = path.resolve(vaultPath);
-    const files = await glob("**/*.md", {
+    const files = await fg("**/*.md", {
       cwd: resolvedPath,
       ignore: ["node_modules/**", ".git/**", "dist/**"],
       absolute: false

package/dist/cli/commands/hive-mind/add-frontmatter.js.map

@@ -1 +1 @@
-{"version":3,"file":"add-frontmatter.js","sources":["../../../../src/cli/commands/hive-mind/add-frontmatter.ts"],"sourcesContent":["/**\n * Hive Mind - Frontmatter Enricher\n *\n * Adds or enriches YAML frontmatter in markdown files to improve discoverability\n * and enable better linking between documents.\n *\n * SPEC-003: Hive Mind Reconnection Tools\n */\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport * as path from 'path';\nimport { readFile, writeFile } from 'fs/promises';\nimport { glob } from 'fast-glob';\nimport matter from 'gray-matter';\nimport * as yaml from 'js-yaml';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface EnrichOptions {\n  overwrite?: boolean;\n  tags?: boolean;\n  aliases?: boolean;\n  links?: boolean;\n  dryRun?: boolean;\n  output?: string;\n  json?: boolean;\n  verbose?: boolean;\n}\n\nexport interface FrontmatterTemplate {\n  title: string;\n  created: string;\n  modified: string;\n  tags: string[];\n  aliases: string[];\n  links: string[];\n  type: string;\n  status: string;\n  description?: string;\n}\n\nexport interface EnrichedFile {\n  file: string;\n  added: string[];\n  updated: string[];\n  frontmatter: FrontmatterTemplate;\n}\n\nexport interface EnrichResult {\n  enriched: EnrichedFile[];\n  skipped: string[];\n  errors: Array<{ file: string; error: string }>;\n  statistics: {\n    totalFiles: number;\n    enrichedCount: number;\n    skippedCount: number;\n    errorCount: number;\n    tagsAdded: number;\n    aliasesAdded: number;\n    linksExtracted: number;\n  };\n}\n\n// ============================================================================\n// Frontmatter Enricher Class\n// ============================================================================\n\nexport class FrontmatterEnricher {\n  /**\n   * Enrich frontmatter for all files in a vault\n   */\n  async enrichVault(vaultPath: string, options: EnrichOptions = {}): Promise<EnrichResult> {\n    const resolvedPath = path.resolve(vaultPath);\n\n    // Find all markdown files\n    const files = await glob('**/*.md', {\n      cwd: resolvedPath,\n      ignore: ['node_modules/**', '.git/**', 'dist/**'],\n      absolute: false,\n    });\n\n    if (files.length === 0) {\n      throw new Error(`No markdown files found in: ${resolvedPath}`);\n    }\n\n    const enriched: EnrichedFile[] = [];\n    const skipped: string[] = [];\n    const errors: Array<{ file: string; error: string }> = [];\n    let tagsAdded = 0;\n    let aliasesAdded = 0;\n    let linksExtracted = 0;\n\n    for (const file of files) {\n      try {\n        const result = await this.enrichFile(\n          path.join(resolvedPath, file),\n          file,\n          options\n        );\n\n        if (result) {\n          enriched.push(result);\n          tagsAdded += result.frontmatter.tags.length;\n          aliasesAdded += result.frontmatter.aliases.length;\n          linksExtracted += result.frontmatter.links.length;\n        } else {\n          skipped.push(file);\n        }\n      } catch (error) {\n        errors.push({\n          file,\n          error: error instanceof Error ? error.message : 'Unknown error',\n        });\n      }\n    }\n\n    return {\n      enriched,\n      skipped,\n      errors,\n      statistics: {\n        totalFiles: files.length,\n        enrichedCount: enriched.length,\n        skippedCount: skipped.length,\n        errorCount: errors.length,\n        tagsAdded,\n        aliasesAdded,\n        linksExtracted,\n      },\n    };\n  }\n\n  /**\n   * Enrich a single file's frontmatter\n   */\n  async enrichFile(\n    filePath: string,\n    relativePath: string,\n    options: EnrichOptions\n  ): Promise<EnrichedFile | null> {\n    const content = await readFile(filePath, 'utf-8');\n    const parsed = matter(content);\n\n    const existingFm = parsed.data as Partial<FrontmatterTemplate>;\n    const hasExistingFm = Object.keys(existingFm).length > 0;\n\n    // Skip if has frontmatter and not overwriting\n    if (hasExistingFm && !options.overwrite) {\n      // Check if we need to add anything\n      const needsTags = options.tags && (!existingFm.tags || existingFm.tags.length === 0);\n      const needsAliases = options.aliases && (!existingFm.aliases || existingFm.aliases.length === 0);\n      const needsLinks = options.links && (!existingFm.links || existingFm.links.length === 0);\n\n      if (!needsTags && !needsAliases && !needsLinks && existingFm.title) {\n        return null;\n      }\n    }\n\n    // Extract metadata from content\n    const metadata = this.extractMetadata(parsed.content, relativePath);\n\n    // Build new frontmatter\n    const added: string[] = [];\n    const updated: string[] = [];\n    const newFm: FrontmatterTemplate = {\n      title: existingFm.title || metadata.title,\n      created: existingFm.created || metadata.created,\n      modified: new Date().toISOString().split('T')[0],\n      tags: [],\n      aliases: [],\n      links: [],\n      type: existingFm.type || metadata.type,\n      status: existingFm.status || 'active',\n    };\n\n    // Track what was added/updated\n    if (!existingFm.title) added.push('title');\n    if (!existingFm.created) added.push('created');\n    if (!existingFm.type) added.push('type');\n    if (!existingFm.status) added.push('status');\n    updated.push('modified');\n\n    // Handle tags\n    if (options.tags !== false) {\n      const existingTags = existingFm.tags || [];\n      const extractedTags = metadata.tags;\n      const mergedTags = [...new Set([...existingTags, ...extractedTags])];\n      newFm.tags = mergedTags;\n\n      const newTagCount = mergedTags.length - existingTags.length;\n      if (newTagCount > 0) added.push(`${newTagCount} tags`);\n    }\n\n    // Handle aliases\n    if (options.aliases !== false) {\n      const existingAliases = existingFm.aliases || [];\n      const extractedAliases = metadata.aliases;\n      const mergedAliases = [...new Set([...existingAliases, ...extractedAliases])];\n      newFm.aliases = mergedAliases;\n\n      const newAliasCount = mergedAliases.length - existingAliases.length;\n      if (newAliasCount > 0) added.push(`${newAliasCount} aliases`);\n    }\n\n    // Handle links\n    if (options.links !== false) {\n      const existingLinks = existingFm.links || [];\n      const extractedLinks = metadata.links;\n      const mergedLinks = [...new Set([...existingLinks, ...extractedLinks])];\n      newFm.links = mergedLinks;\n\n      const newLinkCount = mergedLinks.length - existingLinks.length;\n      if (newLinkCount > 0) added.push(`${newLinkCount} links`);\n    }\n\n    // Add description if missing\n    if (!existingFm.description && metadata.description) {\n      newFm.description = metadata.description;\n      added.push('description');\n    }\n\n    // Write file if not dry run\n    if (!options.dryRun) {\n      const newContent = this.buildMarkdownWithFrontmatter(newFm, parsed.content);\n      await writeFile(filePath, newContent);\n    }\n\n    return {\n      file: relativePath,\n      added,\n      updated,\n      frontmatter: newFm,\n    };\n  }\n\n  /**\n   * Extract metadata from content and filename\n   */\n  private extractMetadata(content: string, filename: string): {\n    title: string;\n    created: string;\n    type: string;\n    tags: string[];\n    aliases: string[];\n    links: string[];\n    description?: string;\n  } {\n    const basename = path.basename(filename, '.md');\n\n    // Extract title from first heading or filename\n    let title = basename;\n    const headingMatch = content.match(/^#\\s+(.+)$/m);\n    if (headingMatch) {\n      title = headingMatch[1].trim();\n    }\n\n    // Generate aliases from title variations\n    const aliases = this.generateAliases(title, basename);\n\n    // Extract tags from hashtags in content\n    const tags = this.extractHashtags(content);\n\n    // Infer type from content and filename\n    const type = this.inferType(content, basename);\n\n    // Extract wiki-links\n    const links = this.extractWikiLinks(content);\n\n    // Extract first paragraph as description\n    const description = this.extractDescription(content);\n\n    // Use current date for created\n    const created = new Date().toISOString().split('T')[0];\n\n    return { title, created, type, tags, aliases, links, description };\n  }\n\n  /**\n   * Generate aliases from title\n   */\n  private generateAliases(title: string, filename: string): string[] {\n    const aliases: string[] = [];\n\n    // Add filename if different from title\n    const cleanFilename = filename.replace(/-/g, ' ').toLowerCase();\n    const cleanTitle = title.toLowerCase();\n    if (cleanFilename !== cleanTitle) {\n      // Convert filename to readable form\n      const readableFilename = filename\n        .replace(/-/g, ' ')\n        .replace(/\\b\\w/g, c => c.toUpperCase());\n      if (readableFilename !== title) {\n        aliases.push(readableFilename);\n      }\n    }\n\n    // Add lowercase version if title has caps\n    if (title !== title.toLowerCase() && !aliases.includes(title.toLowerCase())) {\n      aliases.push(title.toLowerCase());\n    }\n\n    // Add acronym if title has multiple words\n    const words = title.split(/\\s+/);\n    if (words.length >= 2 && words.length <= 5) {\n      const acronym = words\n        .map(w => w[0])\n        .filter(c => c && /[A-Z]/.test(c))\n        .join('');\n      if (acronym.length >= 2 && !aliases.includes(acronym)) {\n        aliases.push(acronym);\n      }\n    }\n\n    return aliases.slice(0, 5); // Limit to 5 aliases\n  }\n\n  /**\n   * Extract hashtags from content\n   */\n  private extractHashtags(content: string): string[] {\n    const tags = new Set<string>();\n\n    // Match #tag patterns (but not #headings)\n    const regex = /(?:^|\\s)#([a-zA-Z][a-zA-Z0-9_-]*)/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const tag = match[1].toLowerCase();\n      if (tag.length > 1 && tag.length < 30) {\n        tags.add(tag);\n      }\n    }\n\n    // Also infer tags from content keywords\n    const inferredTags = this.inferTagsFromContent(content);\n    for (const tag of inferredTags) {\n      tags.add(tag);\n    }\n\n    return Array.from(tags).slice(0, 10); // Limit to 10 tags\n  }\n\n  /**\n   * Infer tags from content analysis\n   */\n  private inferTagsFromContent(content: string): string[] {\n    const tags: string[] = [];\n    const lowerContent = content.toLowerCase();\n\n    // Common topic patterns\n    const patterns: Array<{ pattern: RegExp; tag: string }> = [\n      { pattern: /\\b(api|endpoint|rest|graphql)\\b/i, tag: 'api' },\n      { pattern: /\\b(database|sql|postgres|mysql|mongo)\\b/i, tag: 'database' },\n      { pattern: /\\b(test|testing|jest|vitest|unittest)\\b/i, tag: 'testing' },\n      { pattern: /\\b(docker|container|kubernetes|k8s)\\b/i, tag: 'devops' },\n      { pattern: /\\b(security|auth|authentication|oauth)\\b/i, tag: 'security' },\n      { pattern: /\\b(performance|optimization|cache)\\b/i, tag: 'performance' },\n      { pattern: /\\b(react|vue|angular|frontend)\\b/i, tag: 'frontend' },\n      { pattern: /\\b(node|express|backend|server)\\b/i, tag: 'backend' },\n      { pattern: /\\b(typescript|javascript|python|rust)\\b/i, tag: 'programming' },\n      { pattern: /\\b(guide|tutorial|howto|how-to)\\b/i, tag: 'guide' },\n      { pattern: /\\b(architecture|design|pattern)\\b/i, tag: 'architecture' },\n      { pattern: /\\b(config|configuration|setup)\\b/i, tag: 'configuration' },\n    ];\n\n    for (const { pattern, tag } of patterns) {\n      if (pattern.test(lowerContent)) {\n        tags.push(tag);\n      }\n    }\n\n    return tags;\n  }\n\n  /**\n   * Infer document type from content\n   */\n  private inferType(content: string, filename: string): string {\n    const lowerContent = content.toLowerCase();\n    const lowerFilename = filename.toLowerCase();\n\n    // Check filename patterns\n    if (lowerFilename.includes('readme') || lowerFilename.includes('index')) {\n      return 'guide';\n    }\n    if (lowerFilename.includes('api') || lowerFilename.includes('endpoint')) {\n      return 'technical';\n    }\n    if (lowerFilename.includes('standard') || lowerFilename.includes('convention')) {\n      return 'standard';\n    }\n\n    // Check content patterns\n    if (/```[a-z]+\\n/i.test(content)) {\n      return 'technical';\n    }\n    if (/##\\s*installation|##\\s*getting started|##\\s*usage/i.test(content)) {\n      return 'guide';\n    }\n    if (/##\\s*api|##\\s*endpoints|##\\s*methods/i.test(content)) {\n      return 'technical';\n    }\n    if (/##\\s*overview|##\\s*introduction|##\\s*background/i.test(content)) {\n      return 'concept';\n    }\n\n    return 'concept'; // Default type\n  }\n\n  /**\n   * Extract wiki-links from content\n   */\n  private extractWikiLinks(content: string): string[] {\n    const links = new Set<string>();\n    const regex = /\\[\\[([^\\]|#]+)(?:#[^\\]|]*)?(?:\\|[^\\]]+)?\\]\\]/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const link = match[1].trim();\n      if (link) {\n        links.add(link);\n      }\n    }\n\n    return Array.from(links);\n  }\n\n  /**\n   * Extract first paragraph as description\n   */\n  private extractDescription(content: string): string | undefined {\n    // Skip headings and find first paragraph\n    const lines = content.split('\\n');\n    let foundContent = false;\n    const paragraphLines: string[] = [];\n\n    for (const line of lines) {\n      const trimmed = line.trim();\n\n      // Skip empty lines at start\n      if (!foundContent && !trimmed) continue;\n\n      // Skip headings\n      if (trimmed.startsWith('#')) {\n        if (foundContent) break;\n        continue;\n      }\n\n      // Skip code blocks\n      if (trimmed.startsWith('```')) continue;\n\n      // Found content\n      if (trimmed) {\n        foundContent = true;\n        paragraphLines.push(trimmed);\n      } else if (foundContent) {\n        // End of paragraph\n        break;\n      }\n    }\n\n    const description = paragraphLines.join(' ').slice(0, 200);\n    return description || undefined;\n  }\n\n  /**\n   * Build markdown content with frontmatter\n   */\n  private buildMarkdownWithFrontmatter(fm: FrontmatterTemplate, content: string): string {\n    // Clean frontmatter - remove empty arrays and undefined values\n    const cleanFm: Record<string, unknown> = {};\n\n    if (fm.title) cleanFm.title = fm.title;\n    if (fm.description) cleanFm.description = fm.description;\n    if (fm.type) cleanFm.type = fm.type;\n    if (fm.status) cleanFm.status = fm.status;\n    if (fm.created) cleanFm.created = fm.created;\n    if (fm.modified) cleanFm.modified = fm.modified;\n    if (fm.tags && fm.tags.length > 0) cleanFm.tags = fm.tags;\n    if (fm.aliases && fm.aliases.length > 0) cleanFm.aliases = fm.aliases;\n    if (fm.links && fm.links.length > 0) cleanFm.links = fm.links;\n\n    const yamlStr = yaml.dump(cleanFm, {\n      lineWidth: -1,\n      quotingType: '\"',\n      forceQuotes: false,\n    });\n\n    return `---\\n${yamlStr}---\\n\\n${content.trim()}\\n`;\n  }\n\n  /**\n   * Generate report\n   */\n  generateReport(result: EnrichResult): string {\n    const lines: string[] = [];\n\n    lines.push('# Frontmatter Enrichment Report\\n');\n    lines.push(`Generated: ${new Date().toISOString()}\\n`);\n    lines.push('');\n\n    lines.push('## Summary\\n');\n    lines.push(`| Metric | Value |`);\n    lines.push(`|--------|-------|`);\n    lines.push(`| Total Files | ${result.statistics.totalFiles} |`);\n    lines.push(`| Enriched | ${result.statistics.enrichedCount} |`);\n    lines.push(`| Skipped | ${result.statistics.skippedCount} |`);\n    lines.push(`| Errors | ${result.statistics.errorCount} |`);\n    lines.push(`| Tags Added | ${result.statistics.tagsAdded} |`);\n    lines.push(`| Aliases Added | ${result.statistics.aliasesAdded} |`);\n    lines.push(`| Links Extracted | ${result.statistics.linksExtracted} |`);\n    lines.push('');\n\n    if (result.enriched.length > 0) {\n      lines.push('## Enriched Files\\n');\n      for (const { file, added } of result.enriched.slice(0, 50)) {\n        if (added.length > 0) {\n          lines.push(`- \\`${file}\\`: ${added.join(', ')}`);\n        }\n      }\n      if (result.enriched.length > 50) {\n        lines.push(`\\n*... and ${result.enriched.length - 50} more*`);\n      }\n      lines.push('');\n    }\n\n    if (result.errors.length > 0) {\n      lines.push('## Errors\\n');\n      for (const { file, error } of result.errors) {\n        lines.push(`- \\`${file}\\`: ${error}`);\n      }\n      lines.push('');\n    }\n\n    return lines.join('\\n');\n  }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createAddFrontmatterCommand(): Command {\n  const command = new Command('add-frontmatter')\n    .description('Add/enrich YAML frontmatter in markdown files')\n    .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n    .option('--overwrite', 'Overwrite existing frontmatter fields')\n    .option('--tags', 'Auto-generate tags from content (default: true)')\n    .option('--no-tags', 'Skip tag generation')\n    .option('--aliases', 'Generate aliases from title (default: true)')\n    .option('--no-aliases', 'Skip alias generation')\n    .option('--links', 'Extract wiki-links to frontmatter (default: true)')\n    .option('--no-links', 'Skip link extraction')\n    .option('--dry-run', 'Preview changes without writing files')\n    .option('-o, --output <file>', 'Output file for report')\n    .option('--json', 'Output as JSON')\n    .option('-v, --verbose', 'Show detailed output')\n    .action(async (vaultPath: string, options: EnrichOptions) => {\n      const enricher = new FrontmatterEnricher();\n\n      const mode = options.dryRun ? ' (dry run)' : '';\n      console.log(chalk.cyan(`\\nEnriching frontmatter${mode}...\\n`));\n\n      try {\n        const result = await enricher.enrichVault(vaultPath, options);\n\n        if (options.json) {\n          if (options.output) {\n            await writeFile(options.output, JSON.stringify(result, null, 2));\n            console.log(chalk.green(`Results written to: ${options.output}`));\n          } else {\n            console.log(JSON.stringify(result, null, 2));\n          }\n        } else {\n          // Display summary\n          console.log(chalk.bold('Summary:'));\n          console.log(chalk.white(`  Total Files:      ${result.statistics.totalFiles}`));\n          console.log(chalk.green(`  Enriched:         ${result.statistics.enrichedCount}`));\n          console.log(chalk.gray(`  Skipped:          ${result.statistics.skippedCount}`));\n          if (result.statistics.errorCount > 0) {\n            console.log(chalk.red(`  Errors:           ${result.statistics.errorCount}`));\n          }\n          console.log('');\n\n          console.log(chalk.bold('Additions:'));\n          console.log(chalk.white(`  Tags Added:       ${result.statistics.tagsAdded}`));\n          console.log(chalk.white(`  Aliases Added:    ${result.statistics.aliasesAdded}`));\n          console.log(chalk.white(`  Links Extracted:  ${result.statistics.linksExtracted}`));\n          console.log('');\n\n          if (options.verbose && result.enriched.length > 0) {\n            console.log(chalk.bold('Enriched Files:'));\n            for (const { file, added } of result.enriched.slice(0, 20)) {\n              if (added.length > 0) {\n                console.log(chalk.green(`  ${file}`));\n                console.log(chalk.gray(`    Added: ${added.join(', ')}`));\n              }\n            }\n            if (result.enriched.length > 20) {\n              console.log(chalk.gray(`  ... and ${result.enriched.length - 20} more`));\n            }\n            console.log('');\n          }\n\n          if (result.errors.length > 0) {\n            console.log(chalk.bold(chalk.red('Errors:')));\n            for (const { file, error } of result.errors.slice(0, 10)) {\n              console.log(chalk.red(`  ${file}: ${error}`));\n            }\n            if (result.errors.length > 10) {\n              console.log(chalk.gray(`  ... and ${result.errors.length - 10} more`));\n            }\n            console.log('');\n          }\n\n          // Write report if output specified\n          if (options.output && !options.json) {\n            const report = enricher.generateReport(result);\n            await writeFile(options.output, report);\n            console.log(chalk.green(`Report written to: ${options.output}`));\n          }\n\n          // Show dry-run notice\n          if (options.dryRun) {\n            console.log(chalk.yellow('Dry run complete - no files were modified.'));\n            console.log(chalk.gray('Remove --dry-run to apply changes.\\n'));\n          }\n        }\n      } catch (error) {\n        console.error(chalk.red('Error:'), error instanceof Error ? error.message : 'Unknown error');\n        process.exit(1);\n      }\n    });\n\n  return command;\n}\n\nexport default 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if (!options.dryRun) {\n      const newContent = this.buildMarkdownWithFrontmatter(newFm, parsed.content);\n      await writeFile(filePath, newContent);\n    }\n\n    return {\n      file: relativePath,\n      added,\n      updated,\n      frontmatter: newFm,\n    };\n  }\n\n  /**\n   * Extract metadata from content and filename\n   */\n  private extractMetadata(content: string, filename: string): {\n    title: string;\n    created: string;\n    type: string;\n    tags: string[];\n    aliases: string[];\n    links: string[];\n    description?: string;\n  } {\n    const basename = path.basename(filename, '.md');\n\n    // Extract title from first heading or filename\n    let title = basename;\n    const headingMatch = content.match(/^#\\s+(.+)$/m);\n    if (headingMatch) {\n      title = headingMatch[1].trim();\n    }\n\n    // Generate aliases from title variations\n    const aliases = this.generateAliases(title, basename);\n\n    // Extract tags from hashtags in content\n    const tags = this.extractHashtags(content);\n\n    // Infer type from content and filename\n    const type = this.inferType(content, basename);\n\n    // Extract wiki-links\n    const links = this.extractWikiLinks(content);\n\n    // Extract first paragraph as description\n    const description = this.extractDescription(content);\n\n    // Use current date for created\n    const created = new Date().toISOString().split('T')[0];\n\n    return { title, created, type, tags, aliases, links, description };\n  }\n\n  /**\n   * Generate aliases from title\n   */\n  private generateAliases(title: string, filename: string): string[] {\n    const aliases: string[] = [];\n\n    // Add filename if different from title\n    const cleanFilename = filename.replace(/-/g, ' ').toLowerCase();\n    const cleanTitle = title.toLowerCase();\n    if (cleanFilename !== cleanTitle) {\n      // Convert filename to readable form\n      const readableFilename = filename\n        .replace(/-/g, ' ')\n        .replace(/\\b\\w/g, c => c.toUpperCase());\n      if (readableFilename !== title) {\n        aliases.push(readableFilename);\n      }\n    }\n\n    // Add lowercase version if title has caps\n    if (title !== title.toLowerCase() && !aliases.includes(title.toLowerCase())) {\n      aliases.push(title.toLowerCase());\n    }\n\n    // Add acronym if title has multiple words\n    const words = title.split(/\\s+/);\n    if (words.length >= 2 && words.length <= 5) {\n      const acronym = words\n        .map(w => w[0])\n        .filter(c => c && /[A-Z]/.test(c))\n        .join('');\n      if (acronym.length >= 2 && !aliases.includes(acronym)) {\n        aliases.push(acronym);\n      }\n    }\n\n    return aliases.slice(0, 5); // Limit to 5 aliases\n  }\n\n  /**\n   * Extract hashtags from content\n   */\n  private extractHashtags(content: string): string[] {\n    const tags = new Set<string>();\n\n    // Match #tag patterns (but not #headings)\n    const regex = /(?:^|\\s)#([a-zA-Z][a-zA-Z0-9_-]*)/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const tag = match[1].toLowerCase();\n      if (tag.length > 1 && tag.length < 30) {\n        tags.add(tag);\n      }\n    }\n\n    // Also infer tags from content keywords\n    const inferredTags = this.inferTagsFromContent(content);\n    for (const tag of inferredTags) {\n      tags.add(tag);\n    }\n\n    return Array.from(tags).slice(0, 10); // Limit to 10 tags\n  }\n\n  /**\n   * Infer tags from content analysis\n   */\n  private inferTagsFromContent(content: string): string[] {\n    const tags: string[] = [];\n    const lowerContent = content.toLowerCase();\n\n    // Common topic patterns\n    const patterns: Array<{ pattern: RegExp; tag: string }> = [\n      { pattern: /\\b(api|endpoint|rest|graphql)\\b/i, tag: 'api' },\n      { pattern: /\\b(database|sql|postgres|mysql|mongo)\\b/i, tag: 'database' },\n      { pattern: /\\b(test|testing|jest|vitest|unittest)\\b/i, tag: 'testing' },\n      { pattern: /\\b(docker|container|kubernetes|k8s)\\b/i, tag: 'devops' },\n      { pattern: /\\b(security|auth|authentication|oauth)\\b/i, tag: 'security' },\n      { pattern: /\\b(performance|optimization|cache)\\b/i, tag: 'performance' },\n      { pattern: /\\b(react|vue|angular|frontend)\\b/i, tag: 'frontend' },\n      { pattern: /\\b(node|express|backend|server)\\b/i, tag: 'backend' },\n      { pattern: /\\b(typescript|javascript|python|rust)\\b/i, tag: 'programming' },\n      { pattern: /\\b(guide|tutorial|howto|how-to)\\b/i, tag: 'guide' },\n      { pattern: /\\b(architecture|design|pattern)\\b/i, tag: 'architecture' },\n      { pattern: /\\b(config|configuration|setup)\\b/i, tag: 'configuration' },\n    ];\n\n    for (const { pattern, tag } of patterns) {\n      if (pattern.test(lowerContent)) {\n        tags.push(tag);\n      }\n    }\n\n    return tags;\n  }\n\n  /**\n   * Infer document type from content\n   */\n  private inferType(content: string, filename: string): string {\n    const lowerContent = content.toLowerCase();\n    const lowerFilename = filename.toLowerCase();\n\n    // Check filename patterns\n    if (lowerFilename.includes('readme') || lowerFilename.includes('index')) {\n      return 'guide';\n    }\n    if (lowerFilename.includes('api') || lowerFilename.includes('endpoint')) {\n      return 'technical';\n    }\n    if (lowerFilename.includes('standard') || lowerFilename.includes('convention')) {\n      return 'standard';\n    }\n\n    // Check content patterns\n    if (/```[a-z]+\\n/i.test(content)) {\n      return 'technical';\n    }\n    if (/##\\s*installation|##\\s*getting started|##\\s*usage/i.test(content)) {\n      return 'guide';\n    }\n    if (/##\\s*api|##\\s*endpoints|##\\s*methods/i.test(content)) {\n      return 'technical';\n    }\n    if (/##\\s*overview|##\\s*introduction|##\\s*background/i.test(content)) {\n      return 'concept';\n    }\n\n    return 'concept'; // Default type\n  }\n\n  /**\n   * Extract wiki-links from content\n   */\n  private extractWikiLinks(content: string): string[] {\n    const links = new Set<string>();\n    const regex = /\\[\\[([^\\]|#]+)(?:#[^\\]|]*)?(?:\\|[^\\]]+)?\\]\\]/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const link = match[1].trim();\n      if (link) {\n        links.add(link);\n      }\n    }\n\n    return Array.from(links);\n  }\n\n  /**\n   * Extract first paragraph as description\n   */\n  private extractDescription(content: string): string | undefined {\n    // Skip headings and find first paragraph\n    const lines = content.split('\\n');\n    let foundContent = false;\n    const paragraphLines: string[] = [];\n\n    for (const line of lines) {\n      const trimmed = line.trim();\n\n      // Skip empty lines at start\n      if (!foundContent && !trimmed) continue;\n\n      // Skip headings\n      if (trimmed.startsWith('#')) {\n        if (foundContent) break;\n        continue;\n      }\n\n    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fm.tags.length > 0) cleanFm.tags = fm.tags;\n    if (fm.aliases && fm.aliases.length > 0) cleanFm.aliases = fm.aliases;\n    if (fm.links && fm.links.length > 0) cleanFm.links = fm.links;\n\n    const yamlStr = yaml.dump(cleanFm, {\n      lineWidth: -1,\n      quotingType: '\"',\n      forceQuotes: false,\n    });\n\n    return `---\\n${yamlStr}---\\n\\n${content.trim()}\\n`;\n  }\n\n  /**\n   * Generate report\n   */\n  generateReport(result: EnrichResult): string {\n    const lines: string[] = [];\n\n    lines.push('# Frontmatter Enrichment Report\\n');\n    lines.push(`Generated: ${new Date().toISOString()}\\n`);\n    lines.push('');\n\n    lines.push('## Summary\\n');\n    lines.push(`| Metric | Value |`);\n    lines.push(`|--------|-------|`);\n    lines.push(`| Total Files | ${result.statistics.totalFiles} |`);\n    lines.push(`| Enriched | ${result.statistics.enrichedCount} |`);\n    lines.push(`| Skipped | ${result.statistics.skippedCount} |`);\n    lines.push(`| Errors | ${result.statistics.errorCount} |`);\n    lines.push(`| Tags Added | ${result.statistics.tagsAdded} |`);\n    lines.push(`| Aliases Added | ${result.statistics.aliasesAdded} |`);\n    lines.push(`| Links Extracted | ${result.statistics.linksExtracted} |`);\n    lines.push('');\n\n    if (result.enriched.length > 0) {\n      lines.push('## Enriched Files\\n');\n      for (const { file, added } of result.enriched.slice(0, 50)) {\n        if (added.length > 0) {\n          lines.push(`- \\`${file}\\`: ${added.join(', ')}`);\n        }\n      }\n      if (result.enriched.length > 50) {\n        lines.push(`\\n*... and ${result.enriched.length - 50} more*`);\n      }\n      lines.push('');\n    }\n\n    if (result.errors.length > 0) {\n      lines.push('## Errors\\n');\n      for (const { file, error } of result.errors) {\n        lines.push(`- \\`${file}\\`: ${error}`);\n      }\n      lines.push('');\n    }\n\n    return lines.join('\\n');\n  }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createAddFrontmatterCommand(): Command {\n  const command = new Command('add-frontmatter')\n    .description('Add/enrich YAML frontmatter in markdown files')\n    .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n    .option('--overwrite', 'Overwrite existing frontmatter fields')\n    .option('--tags', 'Auto-generate tags from content (default: true)')\n    .option('--no-tags', 'Skip tag generation')\n    .option('--aliases', 'Generate aliases from title (default: true)')\n    .option('--no-aliases', 'Skip alias generation')\n    .option('--links', 'Extract wiki-links to frontmatter (default: true)')\n    .option('--no-links', 'Skip link extraction')\n    .option('--dry-run', 'Preview changes without writing files')\n    .option('-o, --output <file>', 'Output file for report')\n    .option('--json', 'Output as JSON')\n    .option('-v, --verbose', 'Show detailed output')\n    .action(async (vaultPath: string, options: EnrichOptions) => {\n      const enricher = new FrontmatterEnricher();\n\n      const mode = options.dryRun ? ' (dry run)' : '';\n      console.log(chalk.cyan(`\\nEnriching frontmatter${mode}...\\n`));\n\n      try {\n        const result = await enricher.enrichVault(vaultPath, options);\n\n        if (options.json) {\n          if (options.output) {\n            await writeFile(options.output, JSON.stringify(result, null, 2));\n            console.log(chalk.green(`Results written to: ${options.output}`));\n          } else {\n            console.log(JSON.stringify(result, null, 2));\n          }\n        } else {\n          // Display summary\n          console.log(chalk.bold('Summary:'));\n          console.log(chalk.white(`  Total Files:      ${result.statistics.totalFiles}`));\n          console.log(chalk.green(`  Enriched:         ${result.statistics.enrichedCount}`));\n          console.log(chalk.gray(`  Skipped:          ${result.statistics.skippedCount}`));\n          if (result.statistics.errorCount > 0) {\n            console.log(chalk.red(`  Errors:           ${result.statistics.errorCount}`));\n          }\n          console.log('');\n\n          console.log(chalk.bold('Additions:'));\n          console.log(chalk.white(`  Tags Added:       ${result.statistics.tagsAdded}`));\n          console.log(chalk.white(`  Aliases Added:    ${result.statistics.aliasesAdded}`));\n          console.log(chalk.white(`  Links Extracted:  ${result.statistics.linksExtracted}`));\n          console.log('');\n\n          if (options.verbose && result.enriched.length > 0) {\n            console.log(chalk.bold('Enriched Files:'));\n            for (const { file, added } of result.enriched.slice(0, 20)) {\n              if (added.length > 0) {\n                console.log(chalk.green(`  ${file}`));\n                console.log(chalk.gray(`    Added: ${added.join(', ')}`));\n              }\n            }\n            if (result.enriched.length > 20) {\n              console.log(chalk.gray(`  ... and ${result.enriched.length - 20} more`));\n            }\n            console.log('');\n          }\n\n          if (result.errors.length > 0) {\n            console.log(chalk.bold(chalk.red('Errors:')));\n            for (const { file, error } of result.errors.slice(0, 10)) {\n              console.log(chalk.red(`  ${file}: ${error}`));\n            }\n            if (result.errors.length > 10) {\n              console.log(chalk.gray(`  ... and ${result.errors.length - 10} more`));\n            }\n            console.log('');\n          }\n\n          // Write report if output specified\n          if (options.output && !options.json) {\n            const report = enricher.generateReport(result);\n            await writeFile(options.output, report);\n            console.log(chalk.green(`Report written to: ${options.output}`));\n          }\n\n          // Show dry-run notice\n          if (options.dryRun) {\n            console.log(chalk.yellow('Dry run complete - no files were modified.'));\n            console.log(chalk.gray('Remove --dry-run to 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package/dist/cli/commands/hive-mind/analyze-links.js

@@ -2,7 +2,7 @@ import { Command } from "commander";
 import chalk from "chalk";
 import * as path from "path";
 import { writeFile, access, readFile } from "fs/promises";
-import { glob } from "fast-glob";
+import fg from "fast-glob";
 import matter from "gray-matter";
 class LinkAnalyzer {
   fileMap = /* @__PURE__ */ new Map();
@@ -17,7 +17,7 @@ class LinkAnalyzer {
     } catch {
       throw new Error(`Vault path does not exist: ${resolvedPath}`);
     }
-    const files = await glob("**/*.md", {
+    const files = await fg("**/*.md", {
       cwd: resolvedPath,
       ignore: ["node_modules/**", ".git/**", "dist/**"],
       absolute: false

package/dist/cli/commands/hive-mind/analyze-links.js.map

@@ -1 +1 @@
-{"version":3,"file":"analyze-links.js","sources":["../../../../src/cli/commands/hive-mind/analyze-links.ts"],"sourcesContent":["/**\n * Hive Mind - Link Analyzer\n *\n * Analyzes wiki-links and markdown links in a vault to build an adjacency list\n * and identify orphan files.\n *\n * SPEC-003: Hive Mind Reconnection Tools\n */\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport * as path from 'path';\nimport { readFile, access, writeFile } from 'fs/promises';\nimport { glob } from 'fast-glob';\nimport matter from 'gray-matter';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface AnalyzeOptions {\n  output?: string;\n  json?: boolean;\n  verbose?: boolean;\n  includeContent?: boolean;\n}\n\nexport interface BrokenLink {\n  source: string;\n  target: string;\n  type: 'wikilink' | 'markdown';\n  lineNumber?: number;\n}\n\nexport interface LinkAnalysisResult {\n  totalFiles: number;\n  filesWithLinks: number;\n  orphanFiles: string[];\n  orphanRate: number;\n  linkDensity: number;\n  adjacencyList: Map<string, string[]>;\n  brokenLinks: BrokenLink[];\n  statistics: {\n    totalLinks: number;\n    wikiLinks: number;\n    markdownLinks: number;\n    averageLinksPerFile: number;\n    maxLinksInFile: number;\n    maxLinksFile: string;\n    isolatedClusters: number;\n  };\n}\n\n// ============================================================================\n// Link Analyzer Class\n// ============================================================================\n\nexport class LinkAnalyzer {\n  private fileMap: Map<string, string> = new Map();\n  private allFiles: Set<string> = new Set();\n\n  /**\n   * Analyze a vault for links and build adjacency list\n   */\n  async analyzeVault(vaultPath: string, options: AnalyzeOptions = {}): Promise<LinkAnalysisResult> {\n    const resolvedPath = path.resolve(vaultPath);\n\n    // Check if path exists\n    try {\n      await access(resolvedPath);\n    } catch {\n      throw new Error(`Vault path does not exist: ${resolvedPath}`);\n    }\n\n    // Find all markdown files\n    const files = await glob('**/*.md', {\n      cwd: resolvedPath,\n      ignore: ['node_modules/**', '.git/**', 'dist/**'],\n      absolute: false,\n    });\n\n    if (files.length === 0) {\n      throw new Error(`No markdown files found in: ${resolvedPath}`);\n    }\n\n    // Build file map for resolution (filename without extension -> full path)\n    this.buildFileMap(files);\n\n    const adjacencyList = new Map<string, string[]>();\n    const brokenLinks: BrokenLink[] = [];\n    const incomingLinks = new Map<string, Set<string>>();\n    let totalWikiLinks = 0;\n    let totalMarkdownLinks = 0;\n    let maxLinksInFile = 0;\n    let maxLinksFile = '';\n\n    // Initialize adjacency list and incoming links\n    for (const file of files) {\n      adjacencyList.set(file, []);\n      incomingLinks.set(file, new Set());\n    }\n\n    // Process each file\n    for (const file of files) {\n      const filePath = path.join(resolvedPath, file);\n      const content = await readFile(filePath, 'utf-8');\n\n      // Parse frontmatter to skip it for link counting\n      const { content: bodyContent } = matter(content);\n\n      // Extract links\n      const wikiLinks = this.parseWikiLinks(bodyContent);\n      const markdownLinks = this.parseMarkdownLinks(bodyContent);\n\n      totalWikiLinks += wikiLinks.length;\n      totalMarkdownLinks += markdownLinks.length;\n\n      const fileLinks = adjacencyList.get(file) || [];\n      const totalLinksInThisFile = wikiLinks.length + markdownLinks.length;\n\n      if (totalLinksInThisFile > maxLinksInFile) {\n        maxLinksInFile = totalLinksInThisFile;\n        maxLinksFile = file;\n      }\n\n      // Process wiki links\n      for (const link of wikiLinks) {\n        const resolved = this.resolveLink(link, file);\n        if (resolved && this.allFiles.has(resolved)) {\n          fileLinks.push(resolved);\n          incomingLinks.get(resolved)?.add(file);\n        } else {\n          brokenLinks.push({\n            source: file,\n            target: link,\n            type: 'wikilink',\n          });\n        }\n      }\n\n      // Process markdown links\n      for (const link of markdownLinks) {\n        const resolved = this.resolveLink(link, file);\n        if (resolved && this.allFiles.has(resolved)) {\n          fileLinks.push(resolved);\n          incomingLinks.get(resolved)?.add(file);\n        } else if (!this.isExternalLink(link)) {\n          brokenLinks.push({\n            source: file,\n            target: link,\n            type: 'markdown',\n          });\n        }\n      }\n\n      adjacencyList.set(file, [...new Set(fileLinks)]); // Dedupe\n    }\n\n    // Find orphan files (no incoming AND no outgoing links)\n    const orphanFiles: string[] = [];\n    for (const file of files) {\n      const outgoing = adjacencyList.get(file) || [];\n      const incoming = incomingLinks.get(file) || new Set();\n      if (outgoing.length === 0 && incoming.size === 0) {\n        orphanFiles.push(file);\n      }\n    }\n\n    // Calculate metrics\n    const totalFiles = files.length;\n    const filesWithLinks = files.filter(f => {\n      const outgoing = adjacencyList.get(f) || [];\n      const incoming = incomingLinks.get(f) || new Set();\n      return outgoing.length > 0 || incoming.size > 0;\n    }).length;\n\n    const orphanRate = totalFiles > 0 ? (orphanFiles.length / totalFiles) * 100 : 0;\n    const totalLinks = totalWikiLinks + totalMarkdownLinks;\n    const linkDensity = totalFiles > 0 ? totalLinks / totalFiles : 0;\n    const averageLinksPerFile = totalFiles > 0 ? totalLinks / totalFiles : 0;\n\n    // Calculate isolated clusters using union-find\n    const isolatedClusters = this.countClusters(adjacencyList, files);\n\n    return {\n      totalFiles,\n      filesWithLinks,\n      orphanFiles,\n      orphanRate: Math.round(orphanRate * 100) / 100,\n      linkDensity: Math.round(linkDensity * 100) / 100,\n      adjacencyList,\n      brokenLinks,\n      statistics: {\n        totalLinks,\n        wikiLinks: totalWikiLinks,\n        markdownLinks: totalMarkdownLinks,\n        averageLinksPerFile: Math.round(averageLinksPerFile * 100) / 100,\n        maxLinksInFile,\n        maxLinksFile,\n        isolatedClusters,\n      },\n    };\n  }\n\n  /**\n   * Build a map from filename (without extension) to full path\n   */\n  private buildFileMap(files: string[]): void {\n    this.fileMap.clear();\n    this.allFiles.clear();\n\n    for (const file of files) {\n      this.allFiles.add(file);\n\n      // Map by filename without extension\n      const basename = path.basename(file, '.md');\n      if (!this.fileMap.has(basename)) {\n        this.fileMap.set(basename, file);\n      }\n\n      // Also map by full path without extension\n      const pathWithoutExt = file.replace(/\\.md$/, '');\n      this.fileMap.set(pathWithoutExt, file);\n    }\n  }\n\n  /**\n   * Parse [[wiki-links]] from content\n   * Handles: [[link]], [[link|alias]], [[folder/link]], [[link#heading]]\n   */\n  parseWikiLinks(content: string): string[] {\n    const links: string[] = [];\n    // Match [[link]] and [[link|alias]] patterns\n    const regex = /\\[\\[([^\\]|#]+)(?:#[^\\]|]*)?(?:\\|[^\\]]+)?\\]\\]/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const link = match[1].trim();\n      if (link) {\n        links.push(link);\n      }\n    }\n\n    return links;\n  }\n\n  /**\n   * Parse [markdown](links) from content\n   * Handles: [text](link.md), [text](./link.md), [text](../folder/link.md)\n   */\n  parseMarkdownLinks(content: string): string[] {\n    const links: string[] = [];\n    // Match [text](link) patterns, excluding images ![...](...) and external links\n    const regex = /(?<!!)\\[([^\\]]*)\\]\\(([^)]+)\\)/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const link = match[2].trim();\n      // Skip external links, anchors, and non-md files\n      if (link && !this.isExternalLink(link) && !link.startsWith('#')) {\n        links.push(link);\n      }\n    }\n\n    return links;\n  }\n\n  /**\n   * Check if a link is external (http, https, etc.)\n   */\n  private isExternalLink(link: string): boolean {\n    return /^(https?:|mailto:|tel:|ftp:)/i.test(link);\n  }\n\n  /**\n   * Resolve a link to a file in the vault\n   */\n  private resolveLink(link: string, sourceFile: string): string | null {\n    // Remove .md extension if present\n    let cleanLink = link.replace(/\\.md$/, '');\n\n    // Remove leading ./ or ../ and resolve relative paths\n    if (cleanLink.startsWith('./') || cleanLink.startsWith('../')) {\n      const sourceDir = path.dirname(sourceFile);\n      const resolved = path.normalize(path.join(sourceDir, cleanLink));\n      cleanLink = resolved;\n    }\n\n    // Try to find in file map\n    const found = this.fileMap.get(cleanLink);\n    if (found) return found;\n\n    // Try with .md extension\n    const withMd = cleanLink + '.md';\n    if (this.allFiles.has(withMd)) return withMd;\n\n    // Try just the basename (for simple wiki-links)\n    const basename = path.basename(cleanLink);\n    const byBasename = this.fileMap.get(basename);\n    if (byBasename) return byBasename;\n\n    return null;\n  }\n\n  /**\n   * Count isolated clusters using union-find algorithm\n   */\n  private countClusters(adjacencyList: Map<string, string[]>, files: string[]): number {\n    const parent = new Map<string, string>();\n    const rank = new Map<string, number>();\n\n    // Initialize each file as its own cluster\n    for (const file of files) {\n      parent.set(file, file);\n      rank.set(file, 0);\n    }\n\n    const find = (x: string): string => {\n      if (parent.get(x) !== x) {\n        parent.set(x, find(parent.get(x)!));\n      }\n      return parent.get(x)!;\n    };\n\n    const union = (x: string, y: string): void => {\n      const rootX = find(x);\n      const rootY = find(y);\n      if (rootX !== rootY) {\n        const rankX = rank.get(rootX) || 0;\n        const rankY = rank.get(rootY) || 0;\n        if (rankX < rankY) {\n          parent.set(rootX, rootY);\n        } else if (rankX > rankY) {\n          parent.set(rootY, rootX);\n        } else {\n          parent.set(rootY, rootX);\n          rank.set(rootX, rankX + 1);\n        }\n      }\n    };\n\n    // Union connected files\n    for (const [source, targets] of adjacencyList) {\n      for (const target of targets) {\n        if (parent.has(target)) {\n          union(source, target);\n        }\n      }\n    }\n\n    // Count unique roots\n    const roots = new Set<string>();\n    for (const file of files) {\n      roots.add(find(file));\n    }\n\n    return roots.size;\n  }\n\n  /**\n   * Generate a detailed report\n   */\n  generateReport(result: LinkAnalysisResult): string {\n    const lines: string[] = [];\n\n    lines.push('# Link Analysis Report\\n');\n    lines.push(`Generated: ${new Date().toISOString()}\\n`);\n\n    lines.push('## Summary\\n');\n    lines.push(`| Metric | Value |`);\n    lines.push(`|--------|-------|`);\n    lines.push(`| Total Files | ${result.totalFiles} |`);\n    lines.push(`| Files with Links | ${result.filesWithLinks} |`);\n    lines.push(`| Orphan Files | ${result.orphanFiles.length} |`);\n    lines.push(`| Orphan Rate | ${result.orphanRate}% |`);\n    lines.push(`| Link Density | ${result.linkDensity} |`);\n    lines.push(`| Total Links | ${result.statistics.totalLinks} |`);\n    lines.push(`| Wiki Links | ${result.statistics.wikiLinks} |`);\n    lines.push(`| Markdown Links | ${result.statistics.markdownLinks} |`);\n    lines.push(`| Avg Links/File | ${result.statistics.averageLinksPerFile} |`);\n    lines.push(`| Max Links in File | ${result.statistics.maxLinksInFile} |`);\n    lines.push(`| Most Linked File | ${result.statistics.maxLinksFile} |`);\n    lines.push(`| Isolated Clusters | ${result.statistics.isolatedClusters} |`);\n    lines.push('');\n\n    if (result.orphanFiles.length > 0) {\n      lines.push('## Orphan Files\\n');\n      lines.push('Files with no incoming or outgoing links:\\n');\n      for (const file of result.orphanFiles.slice(0, 50)) {\n        lines.push(`- \\`${file}\\``);\n      }\n      if (result.orphanFiles.length > 50) {\n        lines.push(`\\n... and ${result.orphanFiles.length - 50} more`);\n      }\n      lines.push('');\n    }\n\n    if (result.brokenLinks.length > 0) {\n      lines.push('## Broken Links\\n');\n      lines.push('Links that point to non-existent files:\\n');\n      for (const broken of result.brokenLinks.slice(0, 50)) {\n        lines.push(`- \\`${broken.source}\\` -> \\`${broken.target}\\` (${broken.type})`);\n      }\n      if (result.brokenLinks.length > 50) {\n        lines.push(`\\n... and ${result.brokenLinks.length - 50} more`);\n      }\n      lines.push('');\n    }\n\n    return lines.join('\\n');\n  }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createAnalyzeLinksCommand(): Command {\n  const command = new Command('analyze-links')\n    .description('Analyze wiki-links and markdown links in a vault')\n    .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n    .option('-o, --output <file>', 'Output file for results (JSON or Markdown)')\n    .option('--json', 'Output as JSON')\n    .option('-v, --verbose', 'Show detailed output')\n    .action(async (vaultPath: string, options: AnalyzeOptions) => {\n      const analyzer = new LinkAnalyzer();\n\n      console.log(chalk.cyan('\\nAnalyzing links in vault...\\n'));\n\n      try {\n        const result = await analyzer.analyzeVault(vaultPath, options);\n\n        if (options.json) {\n          // Convert Map to Object for JSON serialization\n          const jsonResult = {\n            ...result,\n            adjacencyList: Object.fromEntries(result.adjacencyList),\n          };\n\n          if (options.output) {\n            await writeFile(options.output, JSON.stringify(jsonResult, null, 2));\n            console.log(chalk.green(`Results written to: ${options.output}`));\n          } else {\n            console.log(JSON.stringify(jsonResult, null, 2));\n          }\n        } else {\n          // Display summary\n          console.log(chalk.bold('Summary:'));\n          console.log(chalk.white(`  Total Files:      ${result.totalFiles}`));\n          console.log(chalk.white(`  Files with Links: ${result.filesWithLinks}`));\n          console.log(chalk.white(`  Orphan Files:     ${chalk.yellow(result.orphanFiles.length.toString())}`));\n          console.log(chalk.white(`  Orphan Rate:      ${chalk.yellow(result.orphanRate + '%')}`));\n          console.log(chalk.white(`  Link Density:     ${result.linkDensity}`));\n          console.log('');\n\n          console.log(chalk.bold('Link Statistics:'));\n          console.log(chalk.white(`  Total Links:      ${result.statistics.totalLinks}`));\n          console.log(chalk.white(`  Wiki Links:       ${result.statistics.wikiLinks}`));\n          console.log(chalk.white(`  Markdown Links:   ${result.statistics.markdownLinks}`));\n          console.log(chalk.white(`  Avg Links/File:   ${result.statistics.averageLinksPerFile}`));\n          console.log(chalk.white(`  Isolated Clusters: ${result.statistics.isolatedClusters}`));\n          console.log('');\n\n          if (result.brokenLinks.length > 0) {\n            console.log(chalk.bold(chalk.red(`Broken Links: ${result.brokenLinks.length}`)));\n            if (options.verbose) {\n              for (const broken of result.brokenLinks.slice(0, 10)) {\n                console.log(chalk.red(`  ${broken.source} -> ${broken.target}`));\n              }\n              if (result.brokenLinks.length > 10) {\n                console.log(chalk.gray(`  ... and ${result.brokenLinks.length - 10} more`));\n              }\n            }\n            console.log('');\n          }\n\n          if (options.verbose && result.orphanFiles.length > 0) {\n            console.log(chalk.bold(chalk.yellow('Orphan Files:')));\n            for (const file of result.orphanFiles.slice(0, 10)) {\n              console.log(chalk.yellow(`  ${file}`));\n            }\n            if (result.orphanFiles.length > 10) {\n              console.log(chalk.gray(`  ... and ${result.orphanFiles.length - 10} more`));\n            }\n            console.log('');\n          }\n\n          // Write report if output specified\n          if (options.output) {\n            const report = analyzer.generateReport(result);\n            await writeFile(options.output, report);\n            console.log(chalk.green(`Report written to: ${options.output}`));\n          }\n\n          // Show target metrics comparison\n          console.log(chalk.bold('Target Metrics:'));\n          const orphanStatus = result.orphanRate < 10 ? chalk.green('PASS') : chalk.red('FAIL');\n          const densityStatus = result.linkDensity > 5.0 ? chalk.green('PASS') : chalk.red('FAIL');\n          console.log(chalk.white(`  Orphan Rate:   ${result.orphanRate}% (target: < 10%) ${orphanStatus}`));\n          console.log(chalk.white(`  Link Density:  ${result.linkDensity} (target: > 5.0) ${densityStatus}`));\n          console.log('');\n        }\n      } catch (error) {\n        console.error(chalk.red('Error:'), error instanceof Error ? error.message : 'Unknown error');\n        process.exit(1);\n      }\n    });\n\n  return command;\n}\n\nexport default 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+{"version":3,"file":"analyze-links.js","sources":["../../../../src/cli/commands/hive-mind/analyze-links.ts"],"sourcesContent":["/**\n * Hive Mind - Link Analyzer\n *\n * Analyzes wiki-links and markdown links in a vault to build an adjacency list\n * and identify orphan files.\n *\n * SPEC-003: Hive Mind Reconnection Tools\n */\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport * as path from 'path';\nimport { readFile, access, writeFile } from 'fs/promises';\nimport fg from 'fast-glob';\nimport matter from 'gray-matter';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface AnalyzeOptions {\n  output?: string;\n  json?: boolean;\n  verbose?: boolean;\n  includeContent?: boolean;\n}\n\nexport interface BrokenLink {\n  source: string;\n  target: string;\n  type: 'wikilink' | 'markdown';\n  lineNumber?: number;\n}\n\nexport interface LinkAnalysisResult {\n  totalFiles: number;\n  filesWithLinks: number;\n  orphanFiles: string[];\n  orphanRate: number;\n  linkDensity: number;\n  adjacencyList: Map<string, string[]>;\n  brokenLinks: BrokenLink[];\n  statistics: {\n    totalLinks: number;\n    wikiLinks: number;\n    markdownLinks: number;\n    averageLinksPerFile: number;\n    maxLinksInFile: number;\n    maxLinksFile: string;\n    isolatedClusters: number;\n  };\n}\n\n// ============================================================================\n// Link Analyzer Class\n// ============================================================================\n\nexport class LinkAnalyzer {\n  private fileMap: Map<string, string> = new Map();\n  private allFiles: Set<string> = new Set();\n\n  /**\n   * Analyze a vault for links and build adjacency list\n   */\n  async analyzeVault(vaultPath: string, options: AnalyzeOptions = {}): Promise<LinkAnalysisResult> {\n    const resolvedPath = path.resolve(vaultPath);\n\n    // Check if path exists\n    try {\n      await access(resolvedPath);\n    } catch {\n      throw new Error(`Vault path does not exist: ${resolvedPath}`);\n    }\n\n    // Find all markdown files\n    const files = await fg('**/*.md', {\n      cwd: resolvedPath,\n      ignore: ['node_modules/**', '.git/**', 'dist/**'],\n      absolute: false,\n    });\n\n    if (files.length === 0) {\n      throw new Error(`No markdown files found in: ${resolvedPath}`);\n    }\n\n    // Build file map for resolution (filename without extension -> full path)\n    this.buildFileMap(files);\n\n    const adjacencyList = new Map<string, string[]>();\n    const brokenLinks: BrokenLink[] = [];\n    const incomingLinks = new Map<string, Set<string>>();\n    let totalWikiLinks = 0;\n    let totalMarkdownLinks = 0;\n    let maxLinksInFile = 0;\n    let maxLinksFile = '';\n\n    // Initialize adjacency list and incoming links\n    for (const file of files) {\n      adjacencyList.set(file, []);\n      incomingLinks.set(file, new Set());\n    }\n\n    // Process each file\n    for (const file of files) {\n      const filePath = path.join(resolvedPath, file);\n      const content = await readFile(filePath, 'utf-8');\n\n      // Parse frontmatter to skip it for link counting\n      const { content: bodyContent } = matter(content);\n\n      // Extract links\n      const wikiLinks = this.parseWikiLinks(bodyContent);\n      const markdownLinks = this.parseMarkdownLinks(bodyContent);\n\n      totalWikiLinks += wikiLinks.length;\n      totalMarkdownLinks += markdownLinks.length;\n\n      const fileLinks = adjacencyList.get(file) || [];\n      const totalLinksInThisFile = wikiLinks.length + markdownLinks.length;\n\n      if (totalLinksInThisFile > maxLinksInFile) {\n        maxLinksInFile = totalLinksInThisFile;\n        maxLinksFile = file;\n      }\n\n      // Process wiki links\n      for (const link of wikiLinks) {\n        const resolved = this.resolveLink(link, file);\n        if (resolved && this.allFiles.has(resolved)) {\n          fileLinks.push(resolved);\n          incomingLinks.get(resolved)?.add(file);\n        } else {\n          brokenLinks.push({\n            source: file,\n            target: link,\n            type: 'wikilink',\n          });\n        }\n      }\n\n      // Process markdown links\n      for (const link of markdownLinks) {\n        const resolved = this.resolveLink(link, file);\n        if (resolved && this.allFiles.has(resolved)) {\n          fileLinks.push(resolved);\n          incomingLinks.get(resolved)?.add(file);\n        } else if (!this.isExternalLink(link)) {\n          brokenLinks.push({\n            source: file,\n            target: link,\n            type: 'markdown',\n          });\n        }\n      }\n\n      adjacencyList.set(file, [...new Set(fileLinks)]); // Dedupe\n    }\n\n    // Find orphan files (no incoming AND no outgoing links)\n    const orphanFiles: string[] = [];\n    for (const file of files) {\n      const outgoing = adjacencyList.get(file) || [];\n      const incoming = incomingLinks.get(file) || new Set();\n      if (outgoing.length === 0 && incoming.size === 0) {\n        orphanFiles.push(file);\n      }\n    }\n\n    // Calculate metrics\n    const totalFiles = files.length;\n    const filesWithLinks = files.filter(f => {\n      const outgoing = adjacencyList.get(f) || [];\n      const incoming = incomingLinks.get(f) || new Set();\n      return outgoing.length > 0 || incoming.size > 0;\n    }).length;\n\n    const orphanRate = totalFiles > 0 ? (orphanFiles.length / totalFiles) * 100 : 0;\n    const totalLinks = totalWikiLinks + totalMarkdownLinks;\n    const linkDensity = totalFiles > 0 ? totalLinks / totalFiles : 0;\n    const averageLinksPerFile = totalFiles > 0 ? totalLinks / totalFiles : 0;\n\n    // Calculate isolated clusters using union-find\n    const isolatedClusters = this.countClusters(adjacencyList, files);\n\n    return {\n      totalFiles,\n      filesWithLinks,\n      orphanFiles,\n      orphanRate: Math.round(orphanRate * 100) / 100,\n      linkDensity: Math.round(linkDensity * 100) / 100,\n      adjacencyList,\n      brokenLinks,\n      statistics: {\n        totalLinks,\n        wikiLinks: totalWikiLinks,\n        markdownLinks: totalMarkdownLinks,\n        averageLinksPerFile: Math.round(averageLinksPerFile * 100) / 100,\n        maxLinksInFile,\n        maxLinksFile,\n        isolatedClusters,\n      },\n    };\n  }\n\n  /**\n   * Build a map from filename (without extension) to full path\n   */\n  private buildFileMap(files: string[]): void {\n    this.fileMap.clear();\n    this.allFiles.clear();\n\n    for (const file of files) {\n      this.allFiles.add(file);\n\n      // Map by filename without extension\n      const basename = path.basename(file, '.md');\n      if (!this.fileMap.has(basename)) {\n        this.fileMap.set(basename, file);\n      }\n\n      // Also map by full path without extension\n      const pathWithoutExt = file.replace(/\\.md$/, '');\n      this.fileMap.set(pathWithoutExt, file);\n    }\n  }\n\n  /**\n   * Parse [[wiki-links]] from content\n   * Handles: [[link]], [[link|alias]], [[folder/link]], [[link#heading]]\n   */\n  parseWikiLinks(content: string): string[] {\n    const links: string[] = [];\n    // Match [[link]] and [[link|alias]] patterns\n    const regex = /\\[\\[([^\\]|#]+)(?:#[^\\]|]*)?(?:\\|[^\\]]+)?\\]\\]/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const link = match[1].trim();\n      if (link) {\n        links.push(link);\n      }\n    }\n\n    return links;\n  }\n\n  /**\n   * Parse [markdown](links) from content\n   * Handles: [text](link.md), [text](./link.md), [text](../folder/link.md)\n   */\n  parseMarkdownLinks(content: string): string[] {\n    const links: string[] = [];\n    // Match [text](link) patterns, excluding images ![...](...) and external links\n    const regex = /(?<!!)\\[([^\\]]*)\\]\\(([^)]+)\\)/g;\n    let match;\n\n    while ((match = regex.exec(content)) !== null) {\n      const link = match[2].trim();\n      // Skip external links, anchors, and non-md files\n      if (link && !this.isExternalLink(link) && !link.startsWith('#')) {\n        links.push(link);\n      }\n    }\n\n    return links;\n  }\n\n  /**\n   * Check if a link is external (http, https, etc.)\n   */\n  private isExternalLink(link: string): boolean {\n    return /^(https?:|mailto:|tel:|ftp:)/i.test(link);\n  }\n\n  /**\n   * Resolve a link to a file in the vault\n   */\n  private resolveLink(link: string, sourceFile: string): string | null {\n    // Remove .md extension if present\n    let cleanLink = link.replace(/\\.md$/, '');\n\n    // Remove leading ./ or ../ and resolve relative paths\n    if (cleanLink.startsWith('./') || cleanLink.startsWith('../')) {\n      const sourceDir = path.dirname(sourceFile);\n      const resolved = path.normalize(path.join(sourceDir, cleanLink));\n      cleanLink = resolved;\n    }\n\n    // Try to find in file map\n    const found = this.fileMap.get(cleanLink);\n    if (found) return found;\n\n    // Try with .md extension\n    const withMd = cleanLink + '.md';\n    if (this.allFiles.has(withMd)) return withMd;\n\n    // Try just the basename (for simple wiki-links)\n    const basename = path.basename(cleanLink);\n    const byBasename = this.fileMap.get(basename);\n    if (byBasename) return byBasename;\n\n    return null;\n  }\n\n  /**\n   * Count isolated clusters using union-find algorithm\n   */\n  private countClusters(adjacencyList: Map<string, string[]>, files: string[]): number {\n    const parent = new Map<string, string>();\n    const rank = new Map<string, number>();\n\n    // Initialize each file as its own cluster\n    for (const file of files) {\n      parent.set(file, file);\n      rank.set(file, 0);\n    }\n\n    const find = (x: string): string => {\n      if (parent.get(x) !== x) {\n        parent.set(x, find(parent.get(x)!));\n      }\n      return parent.get(x)!;\n    };\n\n    const union = (x: string, y: string): void => {\n      const rootX = find(x);\n      const rootY = find(y);\n      if (rootX !== rootY) {\n        const rankX = rank.get(rootX) || 0;\n        const rankY = rank.get(rootY) || 0;\n        if (rankX < rankY) {\n          parent.set(rootX, rootY);\n        } else if (rankX > rankY) {\n          parent.set(rootY, rootX);\n        } else {\n          parent.set(rootY, rootX);\n          rank.set(rootX, rankX + 1);\n        }\n      }\n    };\n\n    // Union connected files\n    for (const [source, targets] of adjacencyList) {\n      for (const target of targets) {\n        if (parent.has(target)) {\n          union(source, target);\n        }\n      }\n    }\n\n    // Count unique roots\n    const roots = new Set<string>();\n    for (const file of files) {\n      roots.add(find(file));\n    }\n\n    return roots.size;\n  }\n\n  /**\n   * Generate a detailed report\n   */\n  generateReport(result: LinkAnalysisResult): string {\n    const lines: string[] = [];\n\n    lines.push('# Link Analysis Report\\n');\n    lines.push(`Generated: ${new Date().toISOString()}\\n`);\n\n    lines.push('## Summary\\n');\n    lines.push(`| Metric | Value |`);\n    lines.push(`|--------|-------|`);\n    lines.push(`| Total Files | ${result.totalFiles} |`);\n    lines.push(`| Files with Links | ${result.filesWithLinks} |`);\n    lines.push(`| Orphan Files | ${result.orphanFiles.length} |`);\n    lines.push(`| Orphan Rate | ${result.orphanRate}% |`);\n    lines.push(`| Link Density | ${result.linkDensity} |`);\n    lines.push(`| Total Links | ${result.statistics.totalLinks} |`);\n    lines.push(`| Wiki Links | ${result.statistics.wikiLinks} |`);\n    lines.push(`| Markdown Links | ${result.statistics.markdownLinks} |`);\n    lines.push(`| Avg Links/File | ${result.statistics.averageLinksPerFile} |`);\n    lines.push(`| Max Links in File | ${result.statistics.maxLinksInFile} |`);\n    lines.push(`| Most Linked File | ${result.statistics.maxLinksFile} |`);\n    lines.push(`| Isolated Clusters | ${result.statistics.isolatedClusters} |`);\n    lines.push('');\n\n    if (result.orphanFiles.length > 0) {\n      lines.push('## Orphan Files\\n');\n      lines.push('Files with no incoming or outgoing links:\\n');\n      for (const file of result.orphanFiles.slice(0, 50)) {\n        lines.push(`- \\`${file}\\``);\n      }\n      if (result.orphanFiles.length > 50) {\n        lines.push(`\\n... and ${result.orphanFiles.length - 50} more`);\n      }\n      lines.push('');\n    }\n\n    if (result.brokenLinks.length > 0) {\n      lines.push('## Broken Links\\n');\n      lines.push('Links that point to non-existent files:\\n');\n      for (const broken of result.brokenLinks.slice(0, 50)) {\n        lines.push(`- \\`${broken.source}\\` -> \\`${broken.target}\\` (${broken.type})`);\n      }\n      if (result.brokenLinks.length > 50) {\n        lines.push(`\\n... and ${result.brokenLinks.length - 50} more`);\n      }\n      lines.push('');\n    }\n\n    return lines.join('\\n');\n  }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createAnalyzeLinksCommand(): Command {\n  const command = new Command('analyze-links')\n    .description('Analyze wiki-links and markdown links in a vault')\n    .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n    .option('-o, --output <file>', 'Output file for results (JSON or Markdown)')\n    .option('--json', 'Output as JSON')\n    .option('-v, --verbose', 'Show detailed output')\n    .action(async (vaultPath: string, options: AnalyzeOptions) => {\n      const analyzer = new LinkAnalyzer();\n\n      console.log(chalk.cyan('\\nAnalyzing links in vault...\\n'));\n\n      try {\n        const result = await analyzer.analyzeVault(vaultPath, options);\n\n        if (options.json) {\n          // Convert Map to Object for JSON serialization\n          const jsonResult = {\n            ...result,\n            adjacencyList: Object.fromEntries(result.adjacencyList),\n          };\n\n          if (options.output) {\n            await writeFile(options.output, JSON.stringify(jsonResult, null, 2));\n            console.log(chalk.green(`Results written to: ${options.output}`));\n          } else {\n            console.log(JSON.stringify(jsonResult, null, 2));\n          }\n        } else {\n          // Display summary\n          console.log(chalk.bold('Summary:'));\n          console.log(chalk.white(`  Total Files:      ${result.totalFiles}`));\n          console.log(chalk.white(`  Files with Links: ${result.filesWithLinks}`));\n          console.log(chalk.white(`  Orphan Files:     ${chalk.yellow(result.orphanFiles.length.toString())}`));\n          console.log(chalk.white(`  Orphan Rate:      ${chalk.yellow(result.orphanRate + '%')}`));\n          console.log(chalk.white(`  Link Density:     ${result.linkDensity}`));\n          console.log('');\n\n          console.log(chalk.bold('Link Statistics:'));\n          console.log(chalk.white(`  Total Links:      ${result.statistics.totalLinks}`));\n          console.log(chalk.white(`  Wiki Links:       ${result.statistics.wikiLinks}`));\n          console.log(chalk.white(`  Markdown Links:   ${result.statistics.markdownLinks}`));\n          console.log(chalk.white(`  Avg Links/File:   ${result.statistics.averageLinksPerFile}`));\n          console.log(chalk.white(`  Isolated Clusters: ${result.statistics.isolatedClusters}`));\n          console.log('');\n\n          if (result.brokenLinks.length > 0) {\n            console.log(chalk.bold(chalk.red(`Broken Links: ${result.brokenLinks.length}`)));\n            if (options.verbose) {\n              for (const broken of result.brokenLinks.slice(0, 10)) {\n                console.log(chalk.red(`  ${broken.source} -> ${broken.target}`));\n              }\n              if (result.brokenLinks.length > 10) {\n                console.log(chalk.gray(`  ... and ${result.brokenLinks.length - 10} more`));\n              }\n            }\n            console.log('');\n          }\n\n          if (options.verbose && result.orphanFiles.length > 0) {\n            console.log(chalk.bold(chalk.yellow('Orphan Files:')));\n            for (const file of result.orphanFiles.slice(0, 10)) {\n              console.log(chalk.yellow(`  ${file}`));\n            }\n            if (result.orphanFiles.length > 10) {\n              console.log(chalk.gray(`  ... and ${result.orphanFiles.length - 10} more`));\n            }\n            console.log('');\n          }\n\n          // Write report if output specified\n          if (options.output) {\n            const report = analyzer.generateReport(result);\n            await writeFile(options.output, report);\n            console.log(chalk.green(`Report written to: ${options.output}`));\n          }\n\n          // Show target metrics comparison\n          console.log(chalk.bold('Target Metrics:'));\n          const orphanStatus = result.orphanRate < 10 ? chalk.green('PASS') : chalk.red('FAIL');\n          const densityStatus = result.linkDensity > 5.0 ? chalk.green('PASS') : chalk.red('FAIL');\n          console.log(chalk.white(`  Orphan Rate:   ${result.orphanRate}% (target: < 10%) ${orphanStatus}`));\n          console.log(chalk.white(`  Link Density:  ${result.linkDensity} (target: > 5.0) ${densityStatus}`));\n          console.log('');\n        }\n      } catch (error) {\n        console.error(chalk.red('Error:'), error instanceof Error ? error.message : 'Unknown error');\n        process.exit(1);\n      }\n    });\n\n  return command;\n}\n\nexport default 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package/dist/cli/commands/hive-mind/find-connections.js

@@ -2,7 +2,7 @@ import { Command } from "commander";
 import chalk from "chalk";
 import * as path from "path";
 import { writeFile, readFile } from "fs/promises";
-import { glob } from "fast-glob";
+import fg from "fast-glob";
 import matter from "gray-matter";
 function tokenize(text) {
   const noCode = text.replace(/```[\s\S]*?```/g, "");
@@ -85,7 +85,7 @@ class ConnectionFinder {
    */
   async buildIndex(vaultPath) {
     const resolvedPath = path.resolve(vaultPath);
-    const files = await glob("**/*.md", {
+    const files = await fg("**/*.md", {
       cwd: resolvedPath,
       ignore: ["node_modules/**", ".git/**", "dist/**"],
       absolute: false

package/dist/cli/commands/hive-mind/find-connections.js.map

@@ -1 +1 @@
-{"version":3,"file":"find-connections.js","sources":["../../../../src/cli/commands/hive-mind/find-connections.ts"],"sourcesContent":["/**\n * Hive Mind - Connection Finder\n *\n * Uses TF-IDF similarity to find potential connections between documents.\n * Suggests links for orphan files to reconnect the knowledge graph.\n *\n * SPEC-003: Hive Mind Reconnection Tools\n */\n\nimport { Command } from 'commander';\nimport chalk from 'chalk';\nimport * as path from 'path';\nimport { readFile, writeFile } from 'fs/promises';\nimport { glob } from 'fast-glob';\nimport matter from 'gray-matter';\n\n// ============================================================================\n// Types\n// ============================================================================\n\nexport interface FindConnectionsOptions {\n  threshold?: string;\n  suggest?: boolean;\n  limit?: string;\n  output?: string;\n  json?: boolean;\n  verbose?: boolean;\n}\n\nexport interface SimilarityMatch {\n  source: string;\n  target: string;\n  similarity: number;\n  sharedTerms: string[];\n}\n\nexport interface DocumentVector {\n  file: string;\n  terms: Map<string, number>;\n  magnitude: number;\n}\n\nexport interface ConnectionFinderResult {\n  totalDocuments: number;\n  suggestedConnections: SimilarityMatch[];\n  orphanConnections: SimilarityMatch[];\n  termCount: number;\n  averageSimilarity: number;\n}\n\n// ============================================================================\n// TF-IDF Implementation\n// ============================================================================\n\n/**\n * Simple tokenizer - splits text into words\n */\nfunction tokenize(text: string): string[] {\n  // Remove code blocks\n  const noCode = text.replace(/```[\\s\\S]*?```/g, '');\n  // Remove inline code\n  const noInline = noCode.replace(/`[^`]+`/g, '');\n  // Remove URLs\n  const noUrls = noInline.replace(/https?:\\/\\/[^\\s]+/g, '');\n  // Remove markdown links but keep text\n  const noLinks = noUrls.replace(/\\[([^\\]]+)\\]\\([^)]+\\)/g, '$1');\n  // Remove wiki links but keep text\n  const noWiki = noLinks.replace(/\\[\\[([^\\]|]+)(?:\\|[^\\]]+)?\\]\\]/g, '$1');\n  // Remove special characters and split\n  const words = noWiki\n    .toLowerCase()\n    .replace(/[^a-z0-9\\s-]/g, ' ')\n    .split(/\\s+/)\n    .filter(word => word.length > 2 && word.length < 30);\n\n  return words;\n}\n\n/**\n * Stopwords to filter out\n */\nconst STOPWORDS = new Set([\n  'the', 'and', 'for', 'are', 'but', 'not', 'you', 'all', 'can', 'had', 'her',\n  'was', 'one', 'our', 'out', 'has', 'have', 'been', 'were', 'some', 'this',\n  'that', 'what', 'when', 'where', 'which', 'while', 'who', 'will', 'with',\n  'would', 'there', 'their', 'from', 'they', 'been', 'said', 'each', 'she',\n  'how', 'its', 'may', 'more', 'than', 'then', 'these', 'into', 'only',\n  'other', 'also', 'any', 'such', 'because', 'about', 'just', 'could', 'very',\n]);\n\n/**\n * Filter stopwords\n */\nfunction filterStopwords(words: string[]): string[] {\n  return words.filter(word => !STOPWORDS.has(word));\n}\n\n// ============================================================================\n// Connection Finder Class\n// ============================================================================\n\nexport class ConnectionFinder {\n  private documents: Map<string, string> = new Map();\n  private documentVectors: Map<string, DocumentVector> = new Map();\n  private documentFrequency: Map<string, number> = new Map();\n  private totalDocuments = 0;\n\n  /**\n   * Build TF-IDF index from vault\n   */\n  async buildIndex(vaultPath: string): Promise<void> {\n    const resolvedPath = path.resolve(vaultPath);\n\n    // Find all markdown files\n    const files = await glob('**/*.md', {\n      cwd: resolvedPath,\n      ignore: ['node_modules/**', '.git/**', 'dist/**'],\n      absolute: false,\n    });\n\n    if (files.length === 0) {\n      throw new Error(`No markdown files found in: ${resolvedPath}`);\n    }\n\n    this.documents.clear();\n    this.documentVectors.clear();\n    this.documentFrequency.clear();\n    this.totalDocuments = files.length;\n\n    // First pass: calculate document frequency\n    const termDocuments = new Map<string, Set<string>>();\n\n    for (const file of files) {\n      const filePath = path.join(resolvedPath, file);\n      const content = await readFile(filePath, 'utf-8');\n      const { content: bodyContent, data: frontmatter } = matter(content);\n\n      // Combine content with frontmatter fields\n      const fullText = [\n        frontmatter.title || '',\n        frontmatter.description || '',\n        Array.isArray(frontmatter.tags) ? frontmatter.tags.join(' ') : '',\n        Array.isArray(frontmatter.aliases) ? frontmatter.aliases.join(' ') : '',\n        bodyContent,\n      ].join(' ');\n\n      this.documents.set(file, fullText);\n\n      const tokens = filterStopwords(tokenize(fullText));\n      const uniqueTerms = new Set(tokens);\n\n      for (const term of uniqueTerms) {\n        if (!termDocuments.has(term)) {\n          termDocuments.set(term, new Set());\n        }\n        termDocuments.get(term)!.add(file);\n      }\n    }\n\n    // Store document frequency\n    for (const [term, docs] of termDocuments) {\n      this.documentFrequency.set(term, docs.size);\n    }\n\n    // Second pass: calculate TF-IDF vectors\n    for (const file of files) {\n      const content = this.documents.get(file)!;\n      const tokens = filterStopwords(tokenize(content));\n\n      // Calculate term frequency\n      const termFreq = new Map<string, number>();\n      for (const term of tokens) {\n        termFreq.set(term, (termFreq.get(term) || 0) + 1);\n      }\n\n      // Calculate TF-IDF\n      const tfidf = new Map<string, number>();\n      const maxFreq = Math.max(...termFreq.values(), 1);\n\n      for (const [term, freq] of termFreq) {\n        const tf = freq / maxFreq; // Normalized TF\n        const df = this.documentFrequency.get(term) || 1;\n        const idf = Math.log(this.totalDocuments / df);\n        tfidf.set(term, tf * idf);\n      }\n\n      // Calculate magnitude\n      let magnitude = 0;\n      for (const value of tfidf.values()) {\n        magnitude += value * value;\n      }\n      magnitude = Math.sqrt(magnitude);\n\n      this.documentVectors.set(file, {\n        file,\n        terms: tfidf,\n        magnitude,\n      });\n    }\n  }\n\n  /**\n   * Find similar documents to a source file\n   */\n  findSimilar(sourceFile: string, threshold = 0.3, limit = 10): SimilarityMatch[] {\n    const sourceVector = this.documentVectors.get(sourceFile);\n    if (!sourceVector) {\n      return [];\n    }\n\n    const matches: SimilarityMatch[] = [];\n\n    for (const [targetFile, targetVector] of this.documentVectors) {\n      if (targetFile === sourceFile) continue;\n\n      const similarity = this.cosineSimilarity(sourceVector, targetVector);\n\n      if (similarity >= threshold) {\n        const sharedTerms = this.findSharedTerms(sourceVector, targetVector);\n        matches.push({\n          source: sourceFile,\n          target: targetFile,\n          similarity: Math.round(similarity * 1000) / 1000,\n          sharedTerms: sharedTerms.slice(0, 5),\n        });\n      }\n    }\n\n    // Sort by similarity descending\n    matches.sort((a, b) => b.similarity - a.similarity);\n\n    return matches.slice(0, limit);\n  }\n\n  /**\n   * Calculate cosine similarity between two document vectors\n   */\n  private cosineSimilarity(a: DocumentVector, b: DocumentVector): number {\n    if (a.magnitude === 0 || b.magnitude === 0) return 0;\n\n    let dotProduct = 0;\n    for (const [term, aValue] of a.terms) {\n      const bValue = b.terms.get(term) || 0;\n      dotProduct += aValue * bValue;\n    }\n\n    return dotProduct / (a.magnitude * b.magnitude);\n  }\n\n  /**\n   * Find shared terms between two documents\n   */\n  private findSharedTerms(a: DocumentVector, b: DocumentVector): string[] {\n    const shared: Array<{ term: string; score: number }> = [];\n\n    for (const [term, aValue] of a.terms) {\n      const bValue = b.terms.get(term);\n      if (bValue && bValue > 0) {\n        shared.push({ term, score: aValue * bValue });\n      }\n    }\n\n    // Sort by combined score\n    shared.sort((a, b) => b.score - a.score);\n\n    return shared.map(s => s.term);\n  }\n\n  /**\n   * Suggest connections for orphan files\n   */\n  async suggestConnections(\n    vaultPath: string,\n    orphanFiles: string[],\n    threshold = 0.3,\n    limit = 5\n  ): Promise<SimilarityMatch[]> {\n    // Build index if not already built\n    if (this.documentVectors.size === 0) {\n      await this.buildIndex(vaultPath);\n    }\n\n    const suggestions: SimilarityMatch[] = [];\n\n    for (const orphan of orphanFiles) {\n      const similar = this.findSimilar(orphan, threshold, limit);\n      suggestions.push(...similar);\n    }\n\n    // Sort by similarity descending\n    suggestions.sort((a, b) => b.similarity - a.similarity);\n\n    return suggestions;\n  }\n\n  /**\n   * Find all potential connections above threshold\n   */\n  async findAllConnections(\n    vaultPath: string,\n    threshold = 0.3,\n    limit = 100\n  ): Promise<ConnectionFinderResult> {\n    // Build index if not already built\n    if (this.documentVectors.size === 0) {\n      await this.buildIndex(vaultPath);\n    }\n\n    const allConnections: SimilarityMatch[] = [];\n    const processed = new Set<string>();\n\n    for (const sourceFile of this.documentVectors.keys()) {\n      const similar = this.findSimilar(sourceFile, threshold, 10);\n      for (const match of similar) {\n        // Avoid duplicates (A-B and B-A)\n        const key = [match.source, match.target].sort().join('|');\n        if (!processed.has(key)) {\n          processed.add(key);\n          allConnections.push(match);\n        }\n      }\n    }\n\n    // Sort by similarity descending\n    allConnections.sort((a, b) => b.similarity - a.similarity);\n\n    const topConnections = allConnections.slice(0, limit);\n    const averageSimilarity = topConnections.length > 0\n      ? topConnections.reduce((sum, c) => sum + c.similarity, 0) / topConnections.length\n      : 0;\n\n    return {\n      totalDocuments: this.totalDocuments,\n      suggestedConnections: topConnections,\n      orphanConnections: [],\n      termCount: this.documentFrequency.size,\n      averageSimilarity: Math.round(averageSimilarity * 1000) / 1000,\n    };\n  }\n\n  /**\n   * Get index statistics\n   */\n  getStats(): { documents: number; terms: number } {\n    return {\n      documents: this.documentVectors.size,\n      terms: this.documentFrequency.size,\n    };\n  }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createFindConnectionsCommand(): Command {\n  const command = new Command('find-connections')\n    .description('Find potential connections using TF-IDF similarity')\n    .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n    .option('-t, --threshold <number>', 'Similarity threshold (0-1)', '0.3')\n    .option('-l, --limit <number>', 'Maximum connections to return', '50')\n    .option('--suggest', 'Focus on orphan files')\n    .option('-o, --output <file>', 'Output file for results')\n    .option('--json', 'Output as JSON')\n    .option('-v, --verbose', 'Show detailed output')\n    .action(async (vaultPath: string, options: FindConnectionsOptions) => {\n      const finder = new ConnectionFinder();\n      const threshold = parseFloat(options.threshold || '0.3');\n      const limit = parseInt(options.limit || '50', 10);\n\n      console.log(chalk.cyan('\\nBuilding TF-IDF index...\\n'));\n\n      try {\n        await finder.buildIndex(vaultPath);\n        const stats = finder.getStats();\n\n        console.log(chalk.white(`  Documents indexed: ${stats.documents}`));\n        console.log(chalk.white(`  Unique terms:      ${stats.terms}`));\n        console.log('');\n\n        const result = await finder.findAllConnections(vaultPath, threshold, limit);\n\n        if (options.json) {\n          if (options.output) {\n            await writeFile(options.output, JSON.stringify(result, null, 2));\n            console.log(chalk.green(`Results written to: ${options.output}`));\n          } else {\n            console.log(JSON.stringify(result, null, 2));\n          }\n        } else {\n          console.log(chalk.bold('Potential Connections Found:\\n'));\n\n          if (result.suggestedConnections.length === 0) {\n            console.log(chalk.yellow('  No connections found above threshold.'));\n            console.log(chalk.gray('  Try lowering the threshold with -t option.\\n'));\n          } else {\n            for (const conn of result.suggestedConnections.slice(0, options.verbose ? 50 : 20)) {\n              const simColor = conn.similarity >= 0.5 ? chalk.green : conn.similarity >= 0.3 ? chalk.yellow : chalk.gray;\n              console.log(\n                simColor(`  [${(conn.similarity * 100).toFixed(1)}%]`),\n                chalk.white(conn.source),\n                chalk.gray('->'),\n                chalk.cyan(conn.target)\n              );\n              if (options.verbose && conn.sharedTerms.length > 0) {\n                console.log(chalk.gray(`          Terms: ${conn.sharedTerms.join(', ')}`));\n              }\n            }\n\n            if (result.suggestedConnections.length > (options.verbose ? 50 : 20)) {\n              console.log(\n                chalk.gray(`\\n  ... and ${result.suggestedConnections.length - (options.verbose ? 50 : 20)} more`)\n              );\n            }\n\n            console.log('');\n            console.log(chalk.bold('Summary:'));\n            console.log(chalk.white(`  Total Documents:   ${result.totalDocuments}`));\n            console.log(chalk.white(`  Connections Found: ${result.suggestedConnections.length}`));\n            console.log(chalk.white(`  Average Similarity: ${(result.averageSimilarity * 100).toFixed(1)}%`));\n            console.log('');\n          }\n\n          // Write to output file if specified\n          if (options.output) {\n            const reportLines = [\n              '# Connection Suggestions\\n',\n              `Generated: ${new Date().toISOString()}\\n`,\n              `Threshold: ${threshold}\\n`,\n              '',\n              '## Suggested Links\\n',\n            ];\n\n            for (const conn of result.suggestedConnections) {\n              reportLines.push(`- **${conn.source}** -> [[${conn.target}]]`);\n              reportLines.push(`  - Similarity: ${(conn.similarity * 100).toFixed(1)}%`);\n              if (conn.sharedTerms.length > 0) {\n                reportLines.push(`  - Shared terms: ${conn.sharedTerms.join(', ')}`);\n              }\n            }\n\n            await writeFile(options.output, reportLines.join('\\n'));\n            console.log(chalk.green(`Report written to: ${options.output}`));\n          }\n\n          // Show next steps\n          console.log(chalk.bold('Next Steps:'));\n          console.log(chalk.gray('  1. Review suggested connections'));\n          console.log(chalk.gray('  2. Add [[wiki-links]] to connect related documents'));\n          console.log(chalk.gray('  3. 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Set(tokens);\n\n      for (const term of uniqueTerms) {\n        if (!termDocuments.has(term)) {\n          termDocuments.set(term, new Set());\n        }\n        termDocuments.get(term)!.add(file);\n      }\n    }\n\n    // Store document frequency\n    for (const [term, docs] of termDocuments) {\n      this.documentFrequency.set(term, docs.size);\n    }\n\n    // Second pass: calculate TF-IDF vectors\n    for (const file of files) {\n      const content = this.documents.get(file)!;\n      const tokens = filterStopwords(tokenize(content));\n\n      // Calculate term frequency\n      const termFreq = new Map<string, number>();\n      for (const term of tokens) {\n        termFreq.set(term, (termFreq.get(term) || 0) + 1);\n      }\n\n      // Calculate TF-IDF\n      const tfidf = new Map<string, number>();\n      const maxFreq = Math.max(...termFreq.values(), 1);\n\n      for (const [term, freq] of termFreq) {\n        const tf = freq / maxFreq; // Normalized TF\n        const df = 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{\n        const sharedTerms = this.findSharedTerms(sourceVector, targetVector);\n        matches.push({\n          source: sourceFile,\n          target: targetFile,\n          similarity: Math.round(similarity * 1000) / 1000,\n          sharedTerms: sharedTerms.slice(0, 5),\n        });\n      }\n    }\n\n    // Sort by similarity descending\n    matches.sort((a, b) => b.similarity - a.similarity);\n\n    return matches.slice(0, limit);\n  }\n\n  /**\n   * Calculate cosine similarity between two document vectors\n   */\n  private cosineSimilarity(a: DocumentVector, b: DocumentVector): number {\n    if (a.magnitude === 0 || b.magnitude === 0) return 0;\n\n    let dotProduct = 0;\n    for (const [term, aValue] of a.terms) {\n      const bValue = b.terms.get(term) || 0;\n      dotProduct += aValue * bValue;\n    }\n\n    return dotProduct / (a.magnitude * b.magnitude);\n  }\n\n  /**\n   * Find shared terms between two documents\n   */\n  private findSharedTerms(a: DocumentVector, b: DocumentVector): string[] {\n    const shared: Array<{ term: string; score: number }> = [];\n\n    for (const [term, aValue] of a.terms) {\n      const bValue = b.terms.get(term);\n      if (bValue && bValue > 0) {\n        shared.push({ term, score: aValue * bValue });\n      }\n    }\n\n    // Sort by combined score\n    shared.sort((a, b) => b.score - a.score);\n\n    return shared.map(s => s.term);\n  }\n\n  /**\n   * Suggest connections for orphan files\n   */\n  async suggestConnections(\n    vaultPath: string,\n    orphanFiles: string[],\n    threshold = 0.3,\n    limit = 5\n  ): Promise<SimilarityMatch[]> {\n    // Build index if not already built\n    if (this.documentVectors.size === 0) {\n      await this.buildIndex(vaultPath);\n    }\n\n    const suggestions: SimilarityMatch[] = [];\n\n    for (const orphan of orphanFiles) {\n      const similar = this.findSimilar(orphan, threshold, limit);\n      suggestions.push(...similar);\n    }\n\n    // Sort by similarity descending\n    suggestions.sort((a, b) => b.similarity - a.similarity);\n\n    return suggestions;\n  }\n\n  /**\n   * Find all potential connections above threshold\n   */\n  async findAllConnections(\n    vaultPath: string,\n    threshold = 0.3,\n    limit = 100\n  ): Promise<ConnectionFinderResult> {\n    // Build index if not already built\n    if (this.documentVectors.size === 0) {\n      await this.buildIndex(vaultPath);\n    }\n\n    const allConnections: SimilarityMatch[] = [];\n    const processed = new Set<string>();\n\n    for (const sourceFile of this.documentVectors.keys()) {\n      const similar = this.findSimilar(sourceFile, threshold, 10);\n      for (const match of similar) {\n        // Avoid duplicates (A-B and B-A)\n        const key = [match.source, match.target].sort().join('|');\n        if (!processed.has(key)) {\n          processed.add(key);\n          allConnections.push(match);\n        }\n      }\n    }\n\n    // Sort by similarity descending\n    allConnections.sort((a, b) => b.similarity - a.similarity);\n\n    const topConnections = allConnections.slice(0, limit);\n    const averageSimilarity = topConnections.length > 0\n      ? topConnections.reduce((sum, c) => sum + c.similarity, 0) / topConnections.length\n      : 0;\n\n    return {\n      totalDocuments: this.totalDocuments,\n      suggestedConnections: topConnections,\n      orphanConnections: [],\n      termCount: this.documentFrequency.size,\n      averageSimilarity: Math.round(averageSimilarity * 1000) / 1000,\n    };\n  }\n\n  /**\n   * Get index statistics\n   */\n  getStats(): { documents: number; terms: number } {\n    return {\n      documents: this.documentVectors.size,\n      terms: this.documentFrequency.size,\n    };\n  }\n}\n\n// ============================================================================\n// CLI Command\n// ============================================================================\n\nexport function createFindConnectionsCommand(): Command {\n  const command = new Command('find-connections')\n    .description('Find potential connections using TF-IDF similarity')\n    .argument('<vault-path>', 'Path to Obsidian vault or docs directory')\n    .option('-t, --threshold <number>', 'Similarity threshold (0-1)', '0.3')\n    .option('-l, --limit <number>', 'Maximum connections to return', '50')\n    .option('--suggest', 'Focus on orphan files')\n    .option('-o, --output <file>', 'Output file for results')\n    .option('--json', 'Output as JSON')\n    .option('-v, --verbose', 'Show detailed output')\n    .action(async (vaultPath: string, options: FindConnectionsOptions) => {\n      const finder = new ConnectionFinder();\n      const threshold = parseFloat(options.threshold || '0.3');\n      const limit = parseInt(options.limit || '50', 10);\n\n      console.log(chalk.cyan('\\nBuilding TF-IDF index...\\n'));\n\n      try {\n        await finder.buildIndex(vaultPath);\n        const stats = finder.getStats();\n\n        console.log(chalk.white(`  Documents indexed: ${stats.documents}`));\n        console.log(chalk.white(`  Unique terms:      ${stats.terms}`));\n        console.log('');\n\n        const result = await finder.findAllConnections(vaultPath, threshold, limit);\n\n        if (options.json) {\n          if (options.output) {\n            await writeFile(options.output, JSON.stringify(result, null, 2));\n            console.log(chalk.green(`Results written to: ${options.output}`));\n          } else {\n            console.log(JSON.stringify(result, null, 2));\n          }\n        } else {\n          console.log(chalk.bold('Potential Connections Found:\\n'));\n\n          if (result.suggestedConnections.length === 0) {\n            console.log(chalk.yellow('  No connections found above threshold.'));\n            console.log(chalk.gray('  Try lowering the threshold with -t option.\\n'));\n          } else {\n            for (const conn of result.suggestedConnections.slice(0, options.verbose ? 50 : 20)) {\n              const simColor = conn.similarity >= 0.5 ? chalk.green : conn.similarity >= 0.3 ? chalk.yellow : chalk.gray;\n              console.log(\n                simColor(`  [${(conn.similarity * 100).toFixed(1)}%]`),\n                chalk.white(conn.source),\n                chalk.gray('->'),\n                chalk.cyan(conn.target)\n              );\n              if (options.verbose && conn.sharedTerms.length > 0) {\n                console.log(chalk.gray(`          Terms: ${conn.sharedTerms.join(', ')}`));\n              }\n            }\n\n            if (result.suggestedConnections.length > (options.verbose ? 50 : 20)) {\n              console.log(\n                chalk.gray(`\\n  ... and ${result.suggestedConnections.length - (options.verbose ? 50 : 20)} more`)\n              );\n            }\n\n            console.log('');\n            console.log(chalk.bold('Summary:'));\n            console.log(chalk.white(`  Total Documents:   ${result.totalDocuments}`));\n            console.log(chalk.white(`  Connections Found: ${result.suggestedConnections.length}`));\n            console.log(chalk.white(`  Average Similarity: ${(result.averageSimilarity * 100).toFixed(1)}%`));\n            console.log('');\n          }\n\n          // Write to output file if specified\n          if (options.output) {\n            const reportLines = [\n              '# Connection Suggestions\\n',\n              `Generated: ${new Date().toISOString()}\\n`,\n              `Threshold: ${threshold}\\n`,\n              '',\n              '## Suggested Links\\n',\n            ];\n\n            for (const conn of result.suggestedConnections) {\n              reportLines.push(`- **${conn.source}** -> [[${conn.target}]]`);\n              reportLines.push(`  - Similarity: ${(conn.similarity * 100).toFixed(1)}%`);\n              if (conn.sharedTerms.length > 0) {\n                reportLines.push(`  - Shared terms: ${conn.sharedTerms.join(', ')}`);\n              }\n            }\n\n            await writeFile(options.output, reportLines.join('\\n'));\n            console.log(chalk.green(`Report written to: ${options.output}`));\n          }\n\n          // Show next steps\n          console.log(chalk.bold('Next Steps:'));\n          console.log(chalk.gray('  1. Review suggested connections'));\n          console.log(chalk.gray('  2. Add [[wiki-links]] to connect related documents'));\n          console.log(chalk.gray('  3. Run kg analyze-links to verify improvement'));\n          console.log('');\n        }\n      } catch (error) {\n        console.error(chalk.red('Error:'), error instanceof Error ? error.message : 'Unknown error');\n        process.exit(1);\n      }\n    });\n\n  return command;\n}\n\nexport default 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package/dist/cli/commands/hive-mind/validate-names.js

@@ -2,7 +2,7 @@ import { Command } from "commander";
 import chalk from "chalk";
 import * as path from "path";
 import { writeFile, access, mkdir, rename } from "fs/promises";
-import { glob } from "fast-glob";
+import fg from "fast-glob";
 const SCHEMAS = {
   kebab: {
     name: "kebab-case",
@@ -46,7 +46,7 @@ class NameValidator {
    */
   async validateVault(vaultPath, options = {}) {
     const resolvedPath = path.resolve(vaultPath);
-    const files = await glob("**/*.md", {
+    const files = await fg("**/*.md", {
       cwd: resolvedPath,
       ignore: ["node_modules/**", ".git/**", "dist/**"],
       absolute: false