@warpgogol/forge 5.2.3 → 5.3.0

package/dist/src/onboarding/upgrade.js

@@ -23,56 +23,59 @@ Sweep batch 4: 73 Compass headers on headerless engine files (certification, com
   <history>RFC-0543</history>
 </CHANGE_SUMMARY>
 */
-import fs from "node:fs";
+import { resolveIo } from "../utils/io.js";
+import { hasGeneratedMarker, mergeEditableGenerated } from "../utils/index.js";
 import path from "node:path";
-import { execSync } from "node:child_process";
 import { stringify as stringifyYaml, parse as parseYaml } from "yaml";
 import { FORGE_CLI_BINDING_DEFAULTS, resolveForgeRoot, loadForgeConfig, serializeForgeConfig, resolvePmRunner, resolvePmInstall, } from "../config/forge-config.js";
 import { FORGE_SKILLS, discoverPackSkills } from "../registry.js";
 import { syncKnowledgeFile } from "../knowledge/index.js";
+import { writeFileIfChanged } from "../utils/fs-idempotent.js";
+import { writeSkillMarker, pruneStaleSkillDirs } from "./skill-markers.js";
+import { planPrettierignore, applyPrettierignore, } from "./prettierignore.js";
 import { generateNestedAgentsMd } from "./nested-agents-generate.js";
 import { scaffoldMemoryLayer } from "./memory-scaffold.js";
-function isMonorepoForge(workspaceRoot) {
-    return fs.existsSync(path.join(workspaceRoot, "packages", "forge", "package.json"));
+async function isMonorepoForge(workspaceRoot, io) {
+    return io.exists(path.join(workspaceRoot, "packages", "forge", "package.json"));
 }
-function updateNpmPackage(workspaceRoot, config, isDryRun) {
-    if (isMonorepoForge(workspaceRoot)) {
+async function updateNpmPackage(workspaceRoot, config, isDryRun, io) {
+    if (await isMonorepoForge(workspaceRoot, io)) {
         return { updated: false, skipped: "monorepo (local package, not npm-installed)" };
     }
     const pm = config.project.packageManager;
     const installCmd = resolvePmInstall(pm);
-    const fullCmd = `${installCmd} @warpgogol/forge@latest`;
+    const installArgs = installCmd.split(/\s+/);
     if (isDryRun) {
         return { updated: false, skipped: "dry-run" };
     }
-    try {
-        execSync(fullCmd, {
-            cwd: workspaceRoot,
-            stdio: "pipe",
-            timeout: 120_000,
-        });
+    const result = await io
+        .exec(installArgs[0], [...installArgs.slice(1), "@warpgogol/forge@latest"], {
+        cwd: workspaceRoot,
+        timeoutMs: 120_000,
+    })
+        .catch(() => null);
+    if (result && result.exitCode === 0) {
         return { updated: true, skipped: null };
     }
-    catch {
-        return { updated: false, skipped: "install failed (network error or registry unavailable)" };
-    }
+    return { updated: false, skipped: "install failed (network error or registry unavailable)" };
 }
-function readForgePackageVersion(forgeRoot) {
+async function readForgePackageVersion(forgeRoot, io) {
     const pkgPath = path.join(forgeRoot, "package.json");
-    const pkg = JSON.parse(fs.readFileSync(pkgPath, "utf8"));
+    const pkg = JSON.parse(await io.readFile(pkgPath));
     return pkg.version ?? "0.0.0-unknown";
 }
-function checkLatestNpmVersion(workspaceRoot, installedVersion, isMonorepo) {
+async function checkLatestNpmVersion(workspaceRoot, installedVersion, isMonorepo, io) {
     if (isMonorepo) {
         return { latest: null, warning: null };
     }
     try {
-        const latest = execSync("npm view @warpgogol/forge version", {
+        const result = await io.exec("npm", ["view", "@warpgogol/forge", "version"], {
             cwd: workspaceRoot,
-            stdio: "pipe",
-            timeout: 15_000,
-            encoding: "utf8",
-        }).trim();
+            timeoutMs: 15_000,
+        });
+        if (result.exitCode !== 0)
+            throw new Error(result.stderr || "npm view failed");
+        const latest = result.stdout.trim();
         if (!latest || !/^\d+\.\d+\.\d+/.test(latest)) {
             return { latest: null, warning: null };
         }
@@ -97,21 +100,25 @@ function checkLatestNpmVersion(workspaceRoot, installedVersion, isMonorepo) {
         return { latest: null, warning: null };
     }
 }
-function syncForgeSkills(workspaceRoot, forgeRoot, skillsDir, dryRun) {
+async function syncForgeSkills(workspaceRoot, forgeRoot, skillsDir, dryRun, io) {
     const updated = [];
     const knowledgeConflicts = [];
     const agentsSkillsDir = path.join(workspaceRoot, skillsDir);
     for (const skill of FORGE_SKILLS) {
         const srcPath = path.join(forgeRoot, skill.path);
-        if (!fs.existsSync(srcPath))
+        if (!(await io.exists(srcPath)))
             continue;
         const skillName = skill.name;
         const destDir = path.join(agentsSkillsDir, skillName);
         const destPath = path.join(destDir, "SKILL.md");
         if (!dryRun) {
-            fs.mkdirSync(destDir, { recursive: true });
-            const content = fs.readFileSync(srcPath, "utf8");
-            fs.writeFileSync(destPath, content, "utf8");
+            await io.mkdir(destDir);
+            const content = await io.readFile(srcPath);
+            await writeFileIfChanged(destPath, content, io);
+            // RFC-1154: marker manifest lists SKILL.md + knowledge files that carry
+            // pure forge content. Merged/skipped knowledge files hold consumer
+            // entries — excluded so a stale dir is kept rather than deleted.
+            const markerFiles = ["SKILL.md"];
             // Sync knowledge files (append-only — never overwrite local entries)
             const fmMatch = content.match(/^---\r?\n([\s\S]*?)\r?\n---/);
             if (fmMatch) {
@@ -125,11 +132,14 @@ function syncForgeSkills(workspaceRoot, forgeRoot, skillsDir, dryRun) {
                                 continue;
                             const kfSrcPath = path.join(skillSrcDir, kf);
                             const kfDestPath = path.join(destDir, kf);
-                            if (fs.existsSync(kfSrcPath)) {
+                            if (await io.exists(kfSrcPath)) {
                                 const syncResult = syncKnowledgeFile(kfSrcPath, kfDestPath);
                                 for (const id of syncResult.conflicts) {
                                     knowledgeConflicts.push(`${skillName}/${kf}#${id}`);
                                 }
+                                if (syncResult.action === "copied" || syncResult.action === "unchanged") {
+                                    markerFiles.push(kf);
+                                }
                             }
                         }
                     }
@@ -138,30 +148,36 @@ function syncForgeSkills(workspaceRoot, forgeRoot, skillsDir, dryRun) {
                     // Frontmatter parse error — SKILL-01 will catch in validation
                 }
             }
+            await writeSkillMarker(destDir, markerFiles, io);
         }
         updated.push(skillName);
     }
     return { updated, knowledgeConflicts };
 }
-function syncSharedKnowledge(workspaceRoot, forgeRoot, skillsDir, dryRun) {
+async function syncSharedKnowledge(workspaceRoot, forgeRoot, skillsDir, dryRun, io) {
     const updated = [];
     const knowledgeConflicts = [];
     const srcPath = path.join(forgeRoot, "skills", "shared", "knowledge", "learned-principles.md");
-    if (!fs.existsSync(srcPath))
+    if (!(await io.exists(srcPath)))
         return { updated, knowledgeConflicts };
     const destDir = path.join(workspaceRoot, skillsDir, "shared-knowledge");
     const destPath = path.join(destDir, "learned-principles.md");
     if (!dryRun) {
-        fs.mkdirSync(destDir, { recursive: true });
+        await io.mkdir(destDir);
         const syncResult = syncKnowledgeFile(srcPath, destPath);
         for (const id of syncResult.conflicts) {
             knowledgeConflicts.push(`shared-knowledge/learned-principles.md#${id}`);
         }
+        // RFC-1154: marker lists the file only when its content is purely forge's.
+        const markerFiles = syncResult.action === "copied" || syncResult.action === "unchanged"
+            ? ["learned-principles.md"]
+            : [];
+        await writeSkillMarker(destDir, markerFiles, io);
     }
     updated.push("shared-knowledge");
     return { updated, knowledgeConflicts };
 }
-function syncPackSkills(workspaceRoot, config, skillsDir, dryRun) {
+async function syncPackSkills(workspaceRoot, config, skillsDir, dryRun, io) {
     const updated = [];
     const skipped = [];
     const knowledgeConflicts = [];
@@ -176,7 +192,7 @@ function syncPackSkills(workspaceRoot, config, skillsDir, dryRun) {
     const forgeSkillNames = new Set(FORGE_SKILLS.map((s) => s.name));
     for (const skill of packSkills) {
         const srcPath = path.join(workspaceRoot, skill.dir, skill.path);
-        if (!fs.existsSync(srcPath))
+        if (!(await io.exists(srcPath)))
             continue;
         const skillName = skill.name;
         if (forgeSkillNames.has(skillName)) {
@@ -186,9 +202,12 @@ function syncPackSkills(workspaceRoot, config, skillsDir, dryRun) {
         const destDir = path.join(agentsSkillsDir, skillName);
         const destPath = path.join(destDir, "SKILL.md");
         if (!dryRun) {
-            fs.mkdirSync(destDir, { recursive: true });
-            const content = fs.readFileSync(srcPath, "utf8");
-            fs.writeFileSync(destPath, content, "utf8");
+            await io.mkdir(destDir);
+            const content = await io.readFile(srcPath);
+            await writeFileIfChanged(destPath, content, io);
+            // RFC-1154: same marker rule as forge skills — merged/skipped knowledge
+            // files carry consumer entries and are excluded from the manifest.
+            const markerFiles = ["SKILL.md"];
             // Sync knowledge files (append-only — never overwrite local entries)
             const fmMatch = content.match(/^---\r?\n([\s\S]*?)\r?\n---/);
             if (fmMatch) {
@@ -202,11 +221,14 @@ function syncPackSkills(workspaceRoot, config, skillsDir, dryRun) {
                                 continue;
                             const kfSrcPath = path.join(skillSrcDir, kf);
                             const kfDestPath = path.join(destDir, kf);
-                            if (fs.existsSync(kfSrcPath)) {
+                            if (await io.exists(kfSrcPath)) {
                                 const syncResult = syncKnowledgeFile(kfSrcPath, kfDestPath);
                                 for (const id of syncResult.conflicts) {
                                     knowledgeConflicts.push(`${skillName}/${kf}#${id}`);
                                 }
+                                if (syncResult.action === "copied" || syncResult.action === "unchanged") {
+                                    markerFiles.push(kf);
+                                }
                             }
                         }
                     }
@@ -215,11 +237,62 @@ function syncPackSkills(workspaceRoot, config, skillsDir, dryRun) {
                     // Frontmatter parse error
                 }
             }
+            await writeSkillMarker(destDir, markerFiles, io);
         }
         updated.push(skillName);
     }
     return { updated, skipped, knowledgeConflicts };
 }
+/**
+ * RFC-1154 reconcile phase — runs on every forge upgrade, including the
+ * same-version noop path: markers for synced dirs, prune stale marked dirs,
+ * managed .prettierignore block. Idempotent; dry-run passes through.
+ */
+async function reconcileGeneratedSurface(workspaceRoot, forgeRoot, config, dryRun, io) {
+    const forgeSkillsResult = await syncForgeSkills(workspaceRoot, forgeRoot, config.paths.skillsDir, dryRun, io);
+    const packResult = await syncPackSkills(workspaceRoot, config, config.paths.skillsDir, dryRun, io);
+    const sharedKnowledgeResult = await syncSharedKnowledge(workspaceRoot, forgeRoot, config.paths.skillsDir, dryRun, io);
+    const currentSyncSet = new Set([
+        ...forgeSkillsResult.updated,
+        ...packResult.updated,
+        ...sharedKnowledgeResult.updated,
+    ]);
+    const warnings = [];
+    let prune = { pruned: [], keptWithConsumerFiles: [] };
+    if (!dryRun) {
+        try {
+            prune = await pruneStaleSkillDirs(path.join(workspaceRoot, config.paths.skillsDir), currentSyncSet, io);
+        }
+        catch (err) {
+            warnings.push(`stale skill dir prune failed: ${err.message}`);
+        }
+    }
+    let prettierignore = "skipped";
+    if (!dryRun) {
+        try {
+            prettierignore = await applyPrettierignore(workspaceRoot, await planPrettierignore(workspaceRoot, config.paths.skillsDir, io), io);
+        }
+        catch (err) {
+            warnings.push(`.prettierignore reconcile failed: ${err.message}`);
+        }
+    }
+    return {
+        updated: [
+            ...forgeSkillsResult.updated,
+            ...packResult.updated,
+            ...sharedKnowledgeResult.updated,
+        ],
+        knowledgeConflicts: [
+            ...forgeSkillsResult.knowledgeConflicts,
+            ...packResult.knowledgeConflicts,
+            ...sharedKnowledgeResult.knowledgeConflicts,
+        ],
+        skipped: packResult.skipped,
+        prune,
+        prettierignore,
+        warnings,
+    };
+}
 function addMissingBindingDefaults(config, dryRun) {
     if (!config.bindings)
         return [];
@@ -239,7 +312,7 @@ function addMissingBindingDefaults(config, dryRun) {
     }
     return added;
 }
-function updateSyncedVersion(workspaceRoot, config, version, dryRun) {
+async function updateSyncedVersion(workspaceRoot, config, version, dryRun, io) {
     if (dryRun)
         return;
     // Set the syncedVersion on the in-memory config (bindings already updated)
@@ -248,15 +321,16 @@ function updateSyncedVersion(workspaceRoot, config, version, dryRun) {
     // RFC-1118: serializeForgeConfig writes the declared profile id verbatim —
     // never the resolved StackProfile object, never drops an unresolvable id.
     const forgeYamlPath = path.join(workspaceRoot, "forge.yaml");
-    fs.writeFileSync(forgeYamlPath, stringifyYaml(serializeForgeConfig(config)), "utf8");
+    await io.writeFile(forgeYamlPath, stringifyYaml(serializeForgeConfig(config)));
 }
 export async function runUpgrade(input, context) {
     const { workspaceRoot, dryRun } = context;
+    const fio = resolveIo(context.io);
     const isDryRun = dryRun || input.flags["dry-run"] === true;
     const isUpdateNpm = input.flags["update-npm"] === true;
     // Step 0: Check forge.yaml exists
     const forgeYamlPath = path.join(workspaceRoot, "forge.yaml");
-    if (!fs.existsSync(forgeYamlPath)) {
+    if (!(await fio.exists(forgeYamlPath))) {
         return {
             data: {
                 command: "forge.upgrade",
@@ -267,12 +341,18 @@ export async function runUpgrade(input, context) {
                 bindingsAdded: [],
                 skippedSkills: [],
                 nestedAgentsGenerated: [],
+                nestedAgentsPlanned: [],
+                nestedAgentsPreserved: [],
+                nestedAgentsSkipped: [],
                 memoryScaffold: { created: [], gitignoreUpdated: false, skipped: [] },
                 npmUpdated: false,
                 npmUpdateSkipped: null,
                 latestNpmVersion: null,
                 npmVersionWarning: null,
                 doctorReport: null,
+                skillsPruned: [],
+                skillsKeptWithConsumerFiles: [],
+                prettierignore: "skipped",
             },
             nextSteps: [{ action: "Run 'forge create' to create forge.yaml first", kind: "required" }],
             exitCode: 1,
@@ -290,7 +370,7 @@ export async function runUpgrade(input, context) {
         catch {
             configForNpm = { project: { packageManager: "npm" } };
         }
-        const npmResult = updateNpmPackage(workspaceRoot, configForNpm, isDryRun);
+        const npmResult = await updateNpmPackage(workspaceRoot, configForNpm, isDryRun, fio);
         npmUpdated = npmResult.updated;
         npmUpdateSkipped = npmResult.skipped;
     }
@@ -299,7 +379,7 @@ export async function runUpgrade(input, context) {
     let toVersion;
     try {
         forgeRoot = context.forgeRoot ?? resolveForgeRoot(workspaceRoot);
-        toVersion = readForgePackageVersion(forgeRoot);
+        toVersion = await readForgePackageVersion(forgeRoot, fio);
     }
     catch (err) {
         return {
@@ -312,12 +392,18 @@ export async function runUpgrade(input, context) {
                 bindingsAdded: [],
                 skippedSkills: [],
                 nestedAgentsGenerated: [],
+                nestedAgentsPlanned: [],
+                nestedAgentsPreserved: [],
+                nestedAgentsSkipped: [],
                 memoryScaffold: { created: [], gitignoreUpdated: false, skipped: [] },
                 npmUpdated: false,
                 npmUpdateSkipped: null,
                 latestNpmVersion: null,
                 npmVersionWarning: null,
                 doctorReport: null,
+                skillsPruned: [],
+                skillsKeptWithConsumerFiles: [],
+                prettierignore: "skipped",
             },
             nextSteps: [
                 { action: "Install @warpgogol/forge first: npm install @warpgogol/forge", kind: "required" },
@@ -327,7 +413,7 @@ export async function runUpgrade(input, context) {
         };
     }
     // Step 1.5: Check npm for newer version (non-fatal)
-    const npmCheck = checkLatestNpmVersion(workspaceRoot, toVersion, isMonorepoForge(workspaceRoot));
+    const npmCheck = await checkLatestNpmVersion(workspaceRoot, toVersion, await isMonorepoForge(workspaceRoot, fio), fio);
     if (npmCheck.warning && context.outputFormat === "pretty") {
         context.logger.warn(`⚠ ${npmCheck.warning}`);
     }
@@ -347,12 +433,18 @@ export async function runUpgrade(input, context) {
                 bindingsAdded: [],
                 skippedSkills: [],
                 nestedAgentsGenerated: [],
+                nestedAgentsPlanned: [],
+                nestedAgentsPreserved: [],
+                nestedAgentsSkipped: [],
                 memoryScaffold: { created: [], gitignoreUpdated: false, skipped: [] },
                 npmUpdated: false,
                 npmUpdateSkipped: null,
                 latestNpmVersion: npmCheck.latest,
                 npmVersionWarning: npmCheck.warning,
                 doctorReport: null,
+                skillsPruned: [],
+                skillsKeptWithConsumerFiles: [],
+                prettierignore: "skipped",
             },
             nextSteps: [
                 { action: `Fix forge.yaml: ${err.message}`, kind: "required" },
@@ -363,23 +455,37 @@ export async function runUpgrade(input, context) {
     }
     const fromVersion = config.forge?.syncedVersion ?? null;
     if (fromVersion === toVersion) {
-        // Noop — versions match
+        // Noop version-wise — but the RFC-1154 reconcile (markers, stale-dir prune,
+        // managed .prettierignore) still runs so a same-version upgrade fixes lint debt.
+        const reconcile = await reconcileGeneratedSurface(workspaceRoot, forgeRoot, config, isDryRun, fio);
+        for (const kept of reconcile.prune.keptWithConsumerFiles) {
+            context.logger.warn(`forge.upgrade: kept stale skill dir ${kept}`);
+        }
+        for (const warn of reconcile.warnings) {
+            context.logger.warn(`forge.upgrade: ${warn}`);
+        }
         return {
             data: {
                 command: "forge.upgrade",
                 status: "noop",
                 fromVersion,
                 toVersion,
-                skillsUpdated: [],
+                skillsUpdated: reconcile.updated,
                 bindingsAdded: [],
-                skippedSkills: [],
+                skippedSkills: reconcile.skipped,
                 nestedAgentsGenerated: [],
+                nestedAgentsPlanned: [],
+                nestedAgentsPreserved: [],
+                nestedAgentsSkipped: [],
                 memoryScaffold: { created: [], gitignoreUpdated: false, skipped: [] },
                 npmUpdated: npmUpdated,
                 npmUpdateSkipped: npmUpdateSkipped,
                 latestNpmVersion: npmCheck.latest,
                 npmVersionWarning: npmCheck.warning,
                 doctorReport: null,
+                skillsPruned: reconcile.prune.pruned,
+                skillsKeptWithConsumerFiles: reconcile.prune.keptWithConsumerFiles,
+                prettierignore: reconcile.prettierignore,
             },
             nextSteps: npmCheck.warning
                 ? [{ action: npmCheck.warning, kind: "optional" }]
@@ -390,22 +496,19 @@ export async function runUpgrade(input, context) {
                 : `[forge.upgrade] Already up to date (v${toVersion})`,
         };
     }
-    // Step 3: Sync forge skills
-    const forgeSkillsResult = syncForgeSkills(workspaceRoot, forgeRoot, config.paths.skillsDir, isDryRun);
-    // Step 3b: Sync pack skills
-    const packResult = syncPackSkills(workspaceRoot, config, config.paths.skillsDir, isDryRun);
-    // Step 3c: Sync shared knowledge layer (RFC-0663)
-    const sharedKnowledgeResult = syncSharedKnowledge(workspaceRoot, forgeRoot, config.paths.skillsDir, isDryRun);
-    const skillsUpdated = [
-        ...forgeSkillsResult.updated,
-        ...packResult.updated,
-        ...sharedKnowledgeResult.updated,
-    ];
-    const knowledgeConflicts = [
-        ...forgeSkillsResult.knowledgeConflicts,
-        ...packResult.knowledgeConflicts,
-        ...sharedKnowledgeResult.knowledgeConflicts,
-    ];
+    // Step 3: RFC-1154 reconcile — sync forge+pack skills + shared knowledge,
+    // write .forge-managed markers, prune stale marked dirs, reconcile the
+    // managed .prettierignore block.
+    const reconcile = await reconcileGeneratedSurface(workspaceRoot, forgeRoot, config, isDryRun, fio);
+    const skillsUpdated = reconcile.updated;
+    const knowledgeConflicts = reconcile.knowledgeConflicts;
+    const packSkipped = reconcile.skipped;
+    for (const kept of reconcile.prune.keptWithConsumerFiles) {
+        context.logger.warn(`forge.upgrade: kept stale skill dir ${kept}`);
+    }
+    for (const warn of reconcile.warnings) {
+        context.logger.warn(`forge.upgrade: ${warn}`);
+    }
     if (knowledgeConflicts.length > 0) {
         context.logger.warn(`forge.upgrade: ${knowledgeConflicts.length} knowledge entr${knowledgeConflicts.length === 1 ? "y" : "ies"} ` +
             `diverge between package and project — local versions kept: ${knowledgeConflicts.join(", ")}`);
@@ -416,19 +519,51 @@ export async function runUpgrade(input, context) {
     const bindingsAdded = addMissingBindingDefaults(config, isDryRun);
     // Step 5: Update forge.syncedVersion
     if (!isDryRun) {
-        updateSyncedVersion(workspaceRoot, config, toVersion, false);
+        await updateSyncedVersion(workspaceRoot, config, toVersion, false, fio);
     }
-    // Step 5b: Generate nested AGENTS.md (RFC-0611)
+    // Step 5b: Generate nested AGENTS.md (RFC-0611). RFC-1153: the write path
+    // merges at the forge:custom boundary, and --dry-run previews which guides
+    // would be rewritten vs. skipped (the destructive step is no longer silent).
     let nestedAgentsGenerated = [];
-    if (!isDryRun) {
-        try {
-            const nestedResult = await generateNestedAgentsMd(workspaceRoot, config, false);
-            nestedAgentsGenerated = nestedResult.generated;
+    const nestedAgentsPlanned = [];
+    let nestedAgentsPreserved = [];
+    const nestedAgentsSkipped = [];
+    try {
+        const nestedResult = await generateNestedAgentsMd(workspaceRoot, config, isDryRun, undefined, fio);
+        if (isDryRun) {
+            for (const [relPath, rendered] of Object.entries(nestedResult.renderedFiles)) {
+                const absPath = path.join(workspaceRoot, relPath);
+                let existing = null;
+                if (await fio.exists(absPath)) {
+                    try {
+                        existing = await fio.readFile(absPath);
+                    }
+                    catch {
+                        // Unreadable — treat as absent; merge will emit a fresh file.
+                    }
+                }
+                if (existing !== null && !hasGeneratedMarker(existing)) {
+                    nestedAgentsSkipped.push(`${relPath} (hand-written)`);
+                    continue;
+                }
+                const merged = mergeEditableGenerated(rendered, existing, relPath);
+                if (merged === null) {
+                    nestedAgentsSkipped.push(`${relPath} (unmapped-customization)`);
+                }
+                else if (merged !== existing) {
+                    nestedAgentsPlanned.push(relPath);
+                }
+            }
         }
-        catch {
-            // Nested generation failure is non-fatal
+        else {
+            nestedAgentsGenerated = nestedResult.generated;
+            nestedAgentsPreserved = nestedResult.preserved;
+            nestedAgentsSkipped.push(...nestedResult.skipped);
         }
     }
+    catch {
+        // Nested generation failure is non-fatal
+    }
     // Step 6: Run doctor
     let doctorReport = null;
     if (!isDryRun) {
@@ -464,19 +599,25 @@ export async function runUpgrade(input, context) {
             toVersion,
             skillsUpdated,
             bindingsAdded,
-            skippedSkills: packResult.skipped,
+            skippedSkills: packSkipped,
             nestedAgentsGenerated,
+            nestedAgentsPlanned,
+            nestedAgentsPreserved,
+            nestedAgentsSkipped,
             memoryScaffold,
             npmUpdated,
             npmUpdateSkipped,
             latestNpmVersion: npmCheck.latest,
             npmVersionWarning: npmCheck.warning,
             doctorReport,
+            skillsPruned: reconcile.prune.pruned,
+            skillsKeptWithConsumerFiles: reconcile.prune.keptWithConsumerFiles,
+            prettierignore: reconcile.prettierignore,
         },
         nextSteps,
         exitCode: 0,
         summary: isDryRun
-            ? `[dry-run] forge.upgrade: would sync ${skillsUpdated.length} skill(s), add ${bindingsAdded.length} binding(s), update syncedVersion to ${toVersion}`
+            ? `[dry-run] forge.upgrade: would sync ${skillsUpdated.length} skill(s), add ${bindingsAdded.length} binding(s), update syncedVersion to ${toVersion}, rewrite ${nestedAgentsPlanned.length} nested AGENTS.md file(s)`
             : npmCheck.warning
                 ? `[forge.upgrade] OK — ${skillsUpdated.length} skill(s) synced, ${bindingsAdded.length} binding(s) added, syncedVersion → ${toVersion} — ⚠ ${npmCheck.warning}`
                 : `[forge.upgrade] OK — ${skillsUpdated.length} skill(s) synced, ${bindingsAdded.length} binding(s) added, syncedVersion → ${toVersion}` +

package/dist/src/onboarding/upgrade.js.map

@@ -1 +1 @@
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package/dist/src/onboarding/workspace-discovery.d.ts

@@ -7,5 +7,5 @@ export interface WorkspaceDir {
     isGenerated: boolean;
 }
 export declare function detectWorkspaceType(dirPath: string, workspaceTypes?: ProfileWorkspaceType[]): WorkspaceType | null;
-export declare function discoverWorkspaces(workspaceRoot: string, workspaceTypes?: ProfileWorkspaceType[]): WorkspaceDir[];
+export declare function discoverWorkspaces(workspaceRoot: string, workspaceTypes?: ProfileWorkspaceType[], extraSkipDirs?: readonly string[]): WorkspaceDir[];
 //# sourceMappingURL=workspace-discovery.d.ts.map

package/dist/src/onboarding/workspace-discovery.d.ts.map

@@ -1 +1 @@
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