@vpxa/aikit 0.1.138 → 0.1.140

package/packages/store/dist/index.js

@@ -1,4 +1,4 @@
-import{i as e,r as t,t as n}from"./sqlite-vec-store-Dfo9BAg8.js";import{existsSync as r,mkdirSync as i}from"node:fs";import{AIKIT_PATHS as a}from"../../core/dist/index.js";import{dirname as o,join as s}from"node:path";var c=class{adapter=null;reopenPromise=null;dbPath;externalAdapter;constructor(e={}){if(e.adapter)this.adapter=e.adapter,this.externalAdapter=!0,this.dbPath=``;else{let t=e.path??a.data;this.dbPath=s(t,`graph.db`),this.externalAdapter=!1}}async initialize(){if(this.externalAdapter){let e=this.getAdapter();this.createTables(e),this.migrateSchema(e),e.flush();return}let t=o(this.dbPath);r(t)||i(t,{recursive:!0}),this.adapter=await e(this.dbPath),this.configureAdapter(this.adapter),this.createTables(this.adapter),this.migrateSchema(this.adapter),this.adapter.flush()}configureAdapter(e){e.pragma(`journal_mode = WAL`),e.pragma(`foreign_keys = ON`)}createTables(e){e.exec(`
+import{i as e,r as t,t as n}from"./sqlite-vec-store-C-GvCcJH.js";import{existsSync as r,mkdirSync as i}from"node:fs";import{AIKIT_PATHS as a}from"../../core/dist/index.js";import{dirname as o,join as s}from"node:path";var c=class{adapter=null;reopenPromise=null;dbPath;externalAdapter;constructor(e={}){if(e.adapter)this.adapter=e.adapter,this.externalAdapter=!0,this.dbPath=``;else{let t=e.path??a.data;this.dbPath=s(t,`graph.db`),this.externalAdapter=!1}}async initialize(){if(this.externalAdapter){let e=this.getAdapter();this.createTables(e),this.migrateSchema(e),e.flush();return}let t=o(this.dbPath);r(t)||i(t,{recursive:!0}),this.adapter=await e(this.dbPath),this.configureAdapter(this.adapter),this.createTables(this.adapter),this.migrateSchema(this.adapter),this.adapter.flush()}configureAdapter(e){e.pragma(`journal_mode = WAL`),e.pragma(`foreign_keys = ON`)}createTables(e){e.exec(`
       CREATE TABLE IF NOT EXISTS nodes (
         id TEXT PRIMARY KEY,
         type TEXT NOT NULL,
@@ -87,4 +87,4 @@ import{i as e,r as t,t as n}from"./sqlite-vec-store-Dfo9BAg8.js";import{existsSy
          VALUES (?, ?, ?, '{}', ?)`,[a,e,t,o]);for(let e=0;e<n.length;e++)this.run(`INSERT INTO process_steps (process_id, node_id, step_order) VALUES (?, ?, ?)`,[a,n[e],e]);s.exec(`COMMIT`),s.flush()}catch(e){throw s.exec(`ROLLBACK`),e}return{id:a,entryNodeId:e,label:t,properties:{},steps:n,createdAt:o}}async getProcesses(e){await this.ensureOpen();let t;t=e?this.query(`SELECT DISTINCT p.id, p.entry_node_id, p.label, p.properties, p.created_at
          FROM processes p
          JOIN process_steps ps ON p.id = ps.process_id
-         WHERE ps.node_id = ?`,[e]):this.query(`SELECT * FROM processes`);let n=[];for(let e of t){let t=this.query(`SELECT node_id FROM process_steps WHERE process_id = ? ORDER BY step_order`,[e.id]);n.push({id:e.id,entryNodeId:e.entry_node_id,label:e.label,properties:l(e.properties),steps:t.map(e=>e.node_id),createdAt:e.created_at})}return n}async deleteProcess(e){await this.ensureOpen();let t=this.getAdapter();t.exec(`BEGIN TRANSACTION`);try{this.run(`DELETE FROM process_steps WHERE process_id = ?`,[e]),this.run(`DELETE FROM processes WHERE id = ?`,[e]),t.exec(`COMMIT`),t.flush()}catch(e){throw t.exec(`ROLLBACK`),e}}async depthGroupedTraversal(e,t=3,n){await this.ensureOpen();let r=n?.direction??`both`,i=n?.edgeType,a=n?.limit??100,o={},s=new Set;s.add(e);let c=[e];for(let e=1;e<=t;e++){let t=[],n=[];for(let e of c){let o=await this.getNeighbors(e,{direction:r,edgeType:i,limit:a});for(let e of o.nodes)s.has(e.id)||(s.add(e.id),t.push(e.id),n.push(e))}if(n.length>0&&(o[e]=n),c=t,c.length===0||s.size>=a)break}return o}async getCohesionScore(e){await this.ensureOpen();let t=this.query(`SELECT id FROM nodes WHERE community = ?`,[e]);if(t.length===0)return 0;let n=new Set(t.map(e=>e.id)),r=t.map(()=>`?`).join(`,`),i=t.map(e=>e.id),a=this.query(`SELECT from_id, to_id FROM edges WHERE from_id IN (${r}) OR to_id IN (${r})`,[...i,...i]);if(a.length===0)return 0;let o=0;for(let e of a)n.has(e.from_id)&&n.has(e.to_id)&&o++;return o/a.length}async getSymbol360(e){let t=await this.getNode(e);if(!t)throw Error(`Node '${e}' not found`);let n=await this.findEdges({toId:e}),r=await this.findEdges({fromId:e}),i=await this.getProcesses(e);return{node:t,incoming:n,outgoing:r,community:t.community??null,processes:i}}releaseMemory(){if(this.adapter)try{this.adapter.exec(`PRAGMA shrink_memory`),this.adapter.exec(`PRAGMA wal_checkpoint(TRUNCATE)`)}catch{}}async close(){this.adapter&&=(this.externalAdapter||this.adapter.close(),null)}};function l(e){if(!e)return{};try{return JSON.parse(e)}catch{return{}}}function u(e){return{id:e.id,type:e.type,name:e.name,properties:l(e.properties),sourceRecordId:e.source_record_id??void 0,sourcePath:e.source_path??void 0,createdAt:e.created_at,community:e.community??void 0}}function d(e){return{id:e.id,fromId:e.from_id,toId:e.to_id,type:e.type,weight:e.weight??1,confidence:e.confidence??1,properties:l(e.properties)}}function f(e){return{id:e.edge_id,fromId:e.from_id,toId:e.to_id,type:e.edge_type,weight:e.weight??1,confidence:e.edge_confidence??1,properties:l(e.edge_props??`{}`)}}function p(e){return{id:e.node_id,type:e.node_type,name:e.node_name,properties:l(e.node_props??`{}`),sourceRecordId:e.node_src_rec??void 0,sourcePath:e.node_src_path??void 0,createdAt:e.node_created,community:e.node_community??void 0}}async function m(e){switch(e.backend){case`lancedb`:{let{LanceStore:t}=await import(`./lance-store-D1JolXlO.js`);return new t({path:e.path})}case`sqlite-vec`:{let{SqliteVecStore:t}=await import(`./sqlite-vec-store-Dfo9BAg8.js`).then(e=>e.n);return new t({path:e.path,adapter:e.adapter,embeddingDim:e.embeddingDim})}default:{let t=e.backend;throw Error(`Unknown store backend: "${t}". Supported: lancedb, sqlite-vec`)}}}export{c as SqliteGraphStore,n as SqliteVecStore,t as createSqlJsAdapter,e as createSqliteAdapter,m as createStore};
+         WHERE ps.node_id = ?`,[e]):this.query(`SELECT * FROM processes`);let n=[];for(let e of t){let t=this.query(`SELECT node_id FROM process_steps WHERE process_id = ? ORDER BY step_order`,[e.id]);n.push({id:e.id,entryNodeId:e.entry_node_id,label:e.label,properties:l(e.properties),steps:t.map(e=>e.node_id),createdAt:e.created_at})}return n}async deleteProcess(e){await this.ensureOpen();let t=this.getAdapter();t.exec(`BEGIN TRANSACTION`);try{this.run(`DELETE FROM process_steps WHERE process_id = ?`,[e]),this.run(`DELETE FROM processes WHERE id = ?`,[e]),t.exec(`COMMIT`),t.flush()}catch(e){throw t.exec(`ROLLBACK`),e}}async depthGroupedTraversal(e,t=3,n){await this.ensureOpen();let r=n?.direction??`both`,i=n?.edgeType,a=n?.limit??100,o={},s=new Set;s.add(e);let c=[e];for(let e=1;e<=t;e++){let t=[],n=[];for(let e of c){let o=await this.getNeighbors(e,{direction:r,edgeType:i,limit:a});for(let e of o.nodes)s.has(e.id)||(s.add(e.id),t.push(e.id),n.push(e))}if(n.length>0&&(o[e]=n),c=t,c.length===0||s.size>=a)break}return o}async getCohesionScore(e){await this.ensureOpen();let t=this.query(`SELECT id FROM nodes WHERE community = ?`,[e]);if(t.length===0)return 0;let n=new Set(t.map(e=>e.id)),r=t.map(()=>`?`).join(`,`),i=t.map(e=>e.id),a=this.query(`SELECT from_id, to_id FROM edges WHERE from_id IN (${r}) OR to_id IN (${r})`,[...i,...i]);if(a.length===0)return 0;let o=0;for(let e of a)n.has(e.from_id)&&n.has(e.to_id)&&o++;return o/a.length}async getSymbol360(e){let t=await this.getNode(e);if(!t)throw Error(`Node '${e}' not found`);let n=await this.findEdges({toId:e}),r=await this.findEdges({fromId:e}),i=await this.getProcesses(e);return{node:t,incoming:n,outgoing:r,community:t.community??null,processes:i}}releaseMemory(){if(this.adapter)try{this.adapter.exec(`PRAGMA shrink_memory`),this.adapter.exec(`PRAGMA wal_checkpoint(TRUNCATE)`)}catch{}}async close(){this.adapter&&=(this.externalAdapter||this.adapter.close(),null)}};function l(e){if(!e)return{};try{return JSON.parse(e)}catch{return{}}}function u(e){return{id:e.id,type:e.type,name:e.name,properties:l(e.properties),sourceRecordId:e.source_record_id??void 0,sourcePath:e.source_path??void 0,createdAt:e.created_at,community:e.community??void 0}}function d(e){return{id:e.id,fromId:e.from_id,toId:e.to_id,type:e.type,weight:e.weight??1,confidence:e.confidence??1,properties:l(e.properties)}}function f(e){return{id:e.edge_id,fromId:e.from_id,toId:e.to_id,type:e.edge_type,weight:e.weight??1,confidence:e.edge_confidence??1,properties:l(e.edge_props??`{}`)}}function p(e){return{id:e.node_id,type:e.node_type,name:e.node_name,properties:l(e.node_props??`{}`),sourceRecordId:e.node_src_rec??void 0,sourcePath:e.node_src_path??void 0,createdAt:e.node_created,community:e.node_community??void 0}}async function m(e){switch(e.backend){case`lancedb`:{let{LanceStore:t}=await import(`./lance-store-DZkqHpPW.js`);return new t({path:e.path})}case`sqlite-vec`:{let{SqliteVecStore:t}=await import(`./sqlite-vec-store-C-GvCcJH.js`).then(e=>e.n);return new t({path:e.path,adapter:e.adapter,embeddingDim:e.embeddingDim})}default:{let t=e.backend;throw Error(`Unknown store backend: "${t}". Supported: lancedb, sqlite-vec`)}}}export{c as SqliteGraphStore,n as SqliteVecStore,t as createSqlJsAdapter,e as createSqliteAdapter,m as createStore};

package/packages/store/dist/lance-store-DZkqHpPW.js

@@ -0,0 +1 @@
+import{EMBEDDING_DEFAULTS as e,SEARCH_DEFAULTS as t,STORE_DEFAULTS as n,createLogger as r,serializeError as i,sourceTypeContentTypes as a}from"../../core/dist/index.js";import{Index as o,connect as s}from"@lancedb/lancedb";function c(e){if(!e)return[];try{let t=JSON.parse(e);return Array.isArray(t)?t:[]}catch{return[]}}const l=/^[\w.\-/ ]+$/,u=r(`store`);function d(e,t){if(!l.test(e))throw Error(`Invalid ${t} filter value: contains disallowed characters`);return e.replace(/'/g,`''`)}var f=class r{db=null;table=null;dbPath;tableName;_draining=!1;_priorityQueue=[];_normalQueue=[];_ftsReady=!1;_ftsRecoveryAttemptAt=0;static FTS_RECOVERY_COOLDOWN_MS=300*1e3;enqueueWrite(e,t=!1){return new Promise((n,r)=>{let i=async()=>{try{n(await e())}catch(e){r(e)}};t?this._priorityQueue.push(i):this._normalQueue.push(i),this._drain()})}async _drain(){if(!this._draining){this._draining=!0;try{for(;this._priorityQueue.length>0||this._normalQueue.length>0;){let e=this._priorityQueue.shift()??this._normalQueue.shift();e&&await e()}}finally{this._draining=!1}}}constructor(e){this.dbPath=e?.path??n.path,this.tableName=e?.tableName??n.tableName}async initialize(){this.db=await s(this.dbPath),(await this.db.tableNames()).includes(this.tableName)&&(this.table=await this.db.openTable(this.tableName),await this.createFtsIndex())}async upsert(e,t){if(e.length!==0){if(e.length!==t.length)throw Error(`Record count (${e.length}) does not match vector count (${t.length})`);for(let n=0;n<t.length;n++)if(t[n].length===0)throw Error(`Zero-length vector at index ${n} for record ${e[n].sourcePath}`);return this.enqueueWrite(()=>this._upsertImpl(e,t))}}async upsertInteractive(e,t){if(e.length!==0){if(e.length!==t.length)throw Error(`Record count (${e.length}) does not match vector count (${t.length})`);for(let n=0;n<t.length;n++)if(t[n].length===0)throw Error(`Zero-length vector at index ${n} for record ${e[n].sourcePath}`);return this.enqueueWrite(()=>this._upsertImpl(e,t),!0)}}async _upsertImpl(e,t){let n=e.map((e,n)=>({id:e.id,vector:Array.from(t[n]),content:e.content,sourcePath:e.sourcePath,contentType:e.contentType,headingPath:e.headingPath??``,chunkIndex:e.chunkIndex,totalChunks:e.totalChunks,startLine:e.startLine,endLine:e.endLine,fileHash:e.fileHash,indexedAt:e.indexedAt,origin:e.origin,tags:JSON.stringify(e.tags),category:e.category??``,version:e.version}));if(this.table){let t=[...new Set(e.map(e=>e.sourcePath))];for(let e of t)try{await this.table.delete(`sourcePath = '${d(e,`sourcePath`)}'`)}catch{}await this.table.add(n)}else try{this.table=await this.db?.createTable(this.tableName,n)??null}catch(e){if(String(e).includes(`already exists`)&&this.db)this.table=await this.db.openTable(this.tableName),await this.table.add(n);else throw e}}async search(e,n){if(e.length===0||!this.table)return[];let r=n?.limit??t.maxResults,i=n?.minScore??t.minScore,a=this.table.search(e).limit(r*2),o=this.buildFilterString(n);return o&&(a=a.where(o)),(await a.toArray()).map(e=>({record:this.fromLanceRecord(e),score:1-(e._distance??1)})).filter(e=>e.score>=i).slice(0,r)}async createFtsIndex(){return this.enqueueWrite(()=>this._createFtsIndexImpl())}async _createFtsIndexImpl(){if(this.table)try{await this.table.createIndex(`content`,{config:o.fts({withPosition:!0}),replace:!0}),this._ftsReady=!0,this._ftsRecoveryAttemptAt=0,u.info(`FTS index created/updated`,{column:`content`})}catch(e){u.warn(`FTS index creation failed`,i(e))}}async ftsSearch(e,n){if(!this.table)return[];if(!this._ftsReady){let e=Date.now();if(e-this._ftsRecoveryAttemptAt<r.FTS_RECOVERY_COOLDOWN_MS)return[];this._ftsRecoveryAttemptAt=e;try{await this.createFtsIndex()}catch{return[]}if(!this._ftsReady)return[]}let a=n?.limit??t.maxResults;try{let t=this.table.search(e).limit(a*2),r=this.buildFilterString(n);return r&&(t=t.where(r)),(await t.toArray()).map(e=>({record:this.fromLanceRecord(e),score:e._score??e._relevance_score??0}))}catch(e){return(e instanceof Error?e.message:String(e)).includes(`INVERTED index`)?(u.debug(`FTS search skipped — index not yet available`),this._ftsReady=!1):u.warn(`FTS search failed`,i(e)),[]}}async getById(e){if(!this.table)return null;let t=await this.table.query().where(`id = '${d(e,`id`)}'`).limit(1).toArray();return t.length===0?null:this.fromLanceRecord(t[0])}async deleteBySourcePath(e){return this.enqueueWrite(()=>this._deleteBySourcePathImpl(e))}async _deleteBySourcePathImpl(e){if(!this.table)return 0;let t=await this.getBySourcePath(e);return t.length===0?0:(await this.table.delete(`sourcePath = '${d(e,`sourcePath`)}'`),t.length)}async deleteById(e){return this.enqueueWrite(()=>this._deleteByIdImpl(e))}async deleteByIdInteractive(e){return this.enqueueWrite(()=>this._deleteByIdImpl(e),!0)}async _deleteByIdImpl(e){return!this.table||!await this.getById(e)?!1:(await this.table.delete(`id = '${d(e,`id`)}'`),!0)}async getBySourcePath(e){return this.table?(await this.table.query().where(`sourcePath = '${d(e,`sourcePath`)}'`).limit(1e3).toArray()).map(e=>this.fromLanceRecord(e)):[]}async getStats(){if(!this.table)return{totalRecords:0,totalFiles:0,contentTypeBreakdown:{},lastIndexedAt:null,storeBackend:`lancedb`,embeddingModel:e.model};let t=await this.table.countRows(),n=await this.table.query().select([`sourcePath`,`contentType`,`indexedAt`]).limit(1e5).toArray(),r={},i=new Set,a=null;for(let e of n){let t=e;r[t.contentType]=(r[t.contentType]??0)+1,i.add(t.sourcePath),(!a||t.indexedAt>a)&&(a=t.indexedAt)}return{totalRecords:t,totalFiles:i.size,contentTypeBreakdown:r,lastIndexedAt:a,storeBackend:`lancedb`,embeddingModel:e.model}}async listSourcePaths(){if(!this.table)return[];let e=await this.table.query().select([`sourcePath`]).limit(1e5).toArray();return[...new Set(e.map(e=>e.sourcePath))]}async dropTable(){return this.enqueueWrite(()=>this._dropTableImpl())}async _dropTableImpl(){if(this.db&&(await this.db.tableNames()).includes(this.tableName))for(let e=1;e<=3;e++)try{await this.db.dropTable(this.tableName);break}catch(t){if(e===3)throw t;let n=e*500;u.warn(`dropTable attempt failed, retrying`,{attempt:e,delayMs:n}),await new Promise(e=>setTimeout(e,n))}this.table=null}async close(){try{this.db&&typeof this.db.close==`function`&&await this.db.close()}catch{}this.table=null,this.db=null}buildFilterString(e){let t=[];if(e?.contentType&&t.push(`contentType = '${d(e.contentType,`contentType`)}'`),e?.sourceType){let n=a(e.sourceType);if(n.length>0){let e=n.map(e=>`'${d(e,`sourceType`)}'`).join(`, `);t.push(`contentType IN (${e})`)}}if(e?.origin&&t.push(`origin = '${d(e.origin,`origin`)}'`),e?.category&&t.push(`category = '${d(e.category,`category`)}'`),e?.tags&&e.tags.length>0){let n=e.tags.map(e=>`tags LIKE '%${d(e,`tag`)}%'`);t.push(`(${n.join(` OR `)})`)}return t.length>0?t.join(` AND `):null}fromLanceRecord(e){return{id:e.id,content:e.content,sourcePath:e.sourcePath,contentType:e.contentType,headingPath:e.headingPath||void 0,chunkIndex:e.chunkIndex,totalChunks:e.totalChunks,startLine:e.startLine,endLine:e.endLine,fileHash:e.fileHash,indexedAt:e.indexedAt,origin:e.origin,tags:c(e.tags),category:e.category||void 0,version:e.version}}};export{f as LanceStore};

package/packages/store/dist/{sqlite-vec-store-Dfo9BAg8.js → sqlite-vec-store-C-GvCcJH.js}

@@ -33,7 +33,7 @@ import{createRequire as e}from"node:module";import{existsSync as t,mkdirSync as
           embedding int8[${this.coarseDim}] distance_metric=cosine,
           +knowledge_id TEXT
         )
-      `)}enqueueWrite(e,t=!1){return new Promise((n,r)=>{let i=async()=>{try{n(await e())}catch(e){r(e)}};t?this._priorityQueue.push(i):this._normalQueue.push(i),this._drain()})}async _drain(){if(!this._draining){this._draining=!0;try{for(;this._priorityQueue.length>0||this._normalQueue.length>0;){let e=this._priorityQueue.shift()??this._normalQueue.shift();e&&await e()}}finally{this._draining=!1}}}async upsert(e,t){if(e.length!==0){if(e.length!==t.length)throw Error(`Record count (${e.length}) does not match vector count (${t.length})`);return this.enqueueWrite(()=>this._upsertImpl(e,t))}}async upsertInteractive(e,t){if(e.length!==0){if(e.length!==t.length)throw Error(`Record count (${e.length}) does not match vector count (${t.length})`);return this.enqueueWrite(()=>this._upsertImpl(e,t),!0)}}async upsertWithoutVector(e,t){return this.enqueueWrite(async()=>{let n=this.getAdapter(),r=e;n.exec(`BEGIN`);try{if(this.upsertKnowledgeRow(r),this.ftsEnabled&&(n.run(`DELETE FROM knowledge_fts WHERE id = ?`,[r.id]),n.run(`INSERT INTO knowledge_fts (id, content) VALUES (?, ?)`,[r.id,r.content])),this.vectorEnabled){let e=n.queryAll(`SELECT embedding FROM vec_knowledge WHERE knowledge_id = ?`,[t]);if(e.length>0){if(n.run(`DELETE FROM vec_knowledge WHERE knowledge_id = ?`,[r.id]),n.run(`INSERT INTO vec_knowledge (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[e[0].embedding,r.id]),this.coarseDim<this.embeddingDim){let e=n.queryAll(`SELECT embedding FROM vec_knowledge_coarse WHERE knowledge_id = ?`,[t]);e.length>0&&(n.run(`DELETE FROM vec_knowledge_coarse WHERE knowledge_id = ?`,[r.id]),n.run(`INSERT INTO vec_knowledge_coarse (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[e[0].embedding,r.id]))}}else k.warn(`upsertWithoutVector: source vector not found, record will lack vector`,{recordId:r.id,sourceRecordId:t})}n.exec(`COMMIT`)}catch(e){try{n.exec(`ROLLBACK`)}catch{}throw e}n.flush()})}upsertKnowledgeRow(e){this.getAdapter().run(`INSERT INTO knowledge (id, content, sourcePath, contentType, headingPath, chunkIndex,
+      `)}enqueueWrite(e,t=!1){return new Promise((n,r)=>{let i=async()=>{try{n(await e())}catch(e){r(e)}};t?this._priorityQueue.push(i):this._normalQueue.push(i),this._drain()})}async _drain(){if(!this._draining){this._draining=!0;try{for(;this._priorityQueue.length>0||this._normalQueue.length>0;){let e=this._priorityQueue.shift()??this._normalQueue.shift();e&&await e()}}finally{this._draining=!1}}}async upsert(e,t){if(e.length!==0){if(e.length!==t.length)throw Error(`Record count (${e.length}) does not match vector count (${t.length})`);for(let n=0;n<t.length;n++)if(t[n].length===0)throw Error(`Zero-length vector at index ${n} for record ${e[n].sourcePath}`);return this.enqueueWrite(()=>this._upsertImpl(e,t))}}async upsertInteractive(e,t){if(e.length!==0){if(e.length!==t.length)throw Error(`Record count (${e.length}) does not match vector count (${t.length})`);for(let n=0;n<t.length;n++)if(t[n].length===0)throw Error(`Zero-length vector at index ${n} for record ${e[n].sourcePath}`);return this.enqueueWrite(()=>this._upsertImpl(e,t),!0)}}async upsertWithoutVector(e,t){return this.enqueueWrite(async()=>{let n=this.getAdapter(),r=e;n.exec(`BEGIN`);try{if(this.upsertKnowledgeRow(r),this.ftsEnabled&&(n.run(`DELETE FROM knowledge_fts WHERE id = ?`,[r.id]),n.run(`INSERT INTO knowledge_fts (id, content) VALUES (?, ?)`,[r.id,r.content])),this.vectorEnabled){let e=n.queryAll(`SELECT embedding FROM vec_knowledge WHERE knowledge_id = ?`,[t]);if(e.length>0){if(n.run(`DELETE FROM vec_knowledge WHERE knowledge_id = ?`,[r.id]),n.run(`INSERT INTO vec_knowledge (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[e[0].embedding,r.id]),this.coarseDim<this.embeddingDim){let e=n.queryAll(`SELECT embedding FROM vec_knowledge_coarse WHERE knowledge_id = ?`,[t]);e.length>0&&(n.run(`DELETE FROM vec_knowledge_coarse WHERE knowledge_id = ?`,[r.id]),n.run(`INSERT INTO vec_knowledge_coarse (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[e[0].embedding,r.id]))}}else k.warn(`upsertWithoutVector: source vector not found, record will lack vector`,{recordId:r.id,sourceRecordId:t})}n.exec(`COMMIT`)}catch(e){try{n.exec(`ROLLBACK`)}catch{}throw e}n.flush()})}upsertKnowledgeRow(e){this.getAdapter().run(`INSERT INTO knowledge (id, content, sourcePath, contentType, headingPath, chunkIndex,
           totalChunks, startLine, endLine, fileHash, content_hash, indexedAt, origin, tags, category, version)
        VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
        ON CONFLICT(id) DO UPDATE SET
@@ -51,7 +51,7 @@ import{createRequire as e}from"node:module";import{existsSync as t,mkdirSync as
          origin = excluded.origin,
          tags = excluded.tags,
          category = excluded.category,
-         version = excluded.version`,[e.id,e.content,e.sourcePath,e.contentType,e.headingPath??``,e.chunkIndex,e.totalChunks,e.startLine,e.endLine,e.fileHash,e.contentHash??``,e.indexedAt,e.origin,JSON.stringify(e.tags??[]),e.category??``,e.version])}async _upsertImpl(e,t){let n=this.getAdapter();n.exec(`BEGIN`);try{for(let r=0;r<e.length;r++){let i=e[r];if(this.upsertKnowledgeRow(i),this.ftsEnabled&&(n.run(`DELETE FROM knowledge_fts WHERE id = ?`,[i.id]),n.run(`INSERT INTO knowledge_fts (id, content) VALUES (?, ?)`,[i.id,i.content])),this.vectorEnabled&&(n.run(`DELETE FROM vec_knowledge WHERE knowledge_id = ?`,[i.id]),n.run(`INSERT INTO vec_knowledge (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[D(t[r]),i.id]),this.coarseDim<this.embeddingDim)){let e=t[r].subarray(0,this.coarseDim);n.run(`DELETE FROM vec_knowledge_coarse WHERE knowledge_id = ?`,[i.id]),n.run(`INSERT INTO vec_knowledge_coarse (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[D(e),i.id])}}n.exec(`COMMIT`)}catch(e){try{n.exec(`ROLLBACK`)}catch{}throw e}n.flush()}async search(e,t){if(!this.vectorEnabled)return this.warnedVectorDisabled||(this.warnedVectorDisabled=!0,k.warn(`search() called but vector backend is disabled — returning []`)),[];let n=this.getAdapter(),r=t?.limit??c.maxResults,i=t?.minScore??c.minScore,a=r*4,o=`
+         version = excluded.version`,[e.id,e.content,e.sourcePath,e.contentType,e.headingPath??``,e.chunkIndex,e.totalChunks,e.startLine,e.endLine,e.fileHash,e.contentHash??``,e.indexedAt,e.origin,JSON.stringify(e.tags??[]),e.category??``,e.version])}async _upsertImpl(e,t){let n=this.getAdapter();n.exec(`BEGIN`);try{for(let r=0;r<e.length;r++){let i=e[r];if(this.upsertKnowledgeRow(i),this.ftsEnabled&&(n.run(`DELETE FROM knowledge_fts WHERE id = ?`,[i.id]),n.run(`INSERT INTO knowledge_fts (id, content) VALUES (?, ?)`,[i.id,i.content])),this.vectorEnabled&&(n.run(`DELETE FROM vec_knowledge WHERE knowledge_id = ?`,[i.id]),n.run(`INSERT INTO vec_knowledge (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[D(t[r]),i.id]),this.coarseDim<this.embeddingDim)){let e=t[r].subarray(0,this.coarseDim);n.run(`DELETE FROM vec_knowledge_coarse WHERE knowledge_id = ?`,[i.id]),n.run(`INSERT INTO vec_knowledge_coarse (embedding, knowledge_id) VALUES (vec_int8(?), ?)`,[D(e),i.id])}}n.exec(`COMMIT`)}catch(e){try{n.exec(`ROLLBACK`)}catch{}throw e}n.flush()}async search(e,t){if(e.length===0)return[];if(!this.vectorEnabled)return this.warnedVectorDisabled||(this.warnedVectorDisabled=!0,k.warn(`search() called but vector backend is disabled — returning []`)),[];let n=this.getAdapter(),r=t?.limit??c.maxResults,i=t?.minScore??c.minScore,a=r*4,o=`
       SELECT k.*, v.distance AS _distance
       FROM (
         SELECT knowledge_id, distance

package/packages/tools/dist/index.d.ts

@@ -1635,6 +1635,8 @@ declare function processStop(id: string): ManagedProcess | undefined;
 declare function processStatus(id: string): ManagedProcess | undefined;
 declare function processList(): ManagedProcess[];
 declare function processLogs(id: string, tail?: number): string[];
+/** Kill all managed processes. Used during server shutdown to prevent zombies. */
+declare function processStopAll(): void;
 //#endregion
 //#region packages/tools/src/queue.d.ts
 interface QueueItem {
@@ -2300,4 +2302,4 @@ declare function addToWorkset(name: string, files: string[], cwd?: string): Work
  */
 declare function removeFromWorkset(name: string, files: string[], cwd?: string): Workset | null;
 //#endregion
-export { type AikitNextHint, type AikitResponse, type AikitResponseMeta, type AikitToolError, type AikitToolErrorCode, type AuditCheck, type AuditData, type AuditOptions, type AuditRecommendation, type ChangelogEntry, type ChangelogFormat, type ChangelogOptions, type ChangelogResult, type CheckOptions, type CheckResult, type CheckSummaryResult, type Checkpoint, type ClassifyTrigger, type CodemodChange, type CodemodOptions, type CodemodResult, type CodemodRule, type CompactOptions, type CompactResult, type CompressOutputOptions, type CompressionContext, type CompressionMode, type CompressionResult, type CompressionRule, type ConstraintRef, type DeadSymbol, type DeadSymbolOptions, type DeadSymbolResult, type DelegateOptions, type DelegateResult, type DiffChange, type DiffFile, type DiffHunk, type DiffParseOptions, type DigestFieldEntry, type DigestOptions, type DigestResult, type DigestSource, type DogfoodLogEntry, type DogfoodLogGroupedEntry, type DogfoodLogOptions, type DogfoodLogResult, type EncodeOperation, type EncodeOptions, type EncodeResult, type EnvInfoOptions, type EnvInfoResult, type EvalOptions, type EvalResult, type EvidenceEntry, type EvidenceMapAction, type EvidenceMapResult, type EvidenceMapState, type EvidenceStatus, type Example, FileCache, type FileCacheEntry, type FileCacheStats, type FileMetrics, type FileSummaryOptions, type FileSummaryResult, type FindExamplesOptions, type FindExamplesResult, type FindOptions, type FindResult, type FindResults, type ForgeClassifyCeremony, type ForgeClassifyOptions, type ForgeClassifyResult, type ForgeGroundOptions, type ForgeGroundResult, type ForgeTier, GIT_REF_SLUG_PATTERN, type GateConfig, type GateDecision, type GateResult, type GitContextOptions, type GitContextResult, type GraphAugmentOptions, type GraphAugmentedResult, type GraphQueryOptions, type GraphQueryResult, type GuideRecommendation, type GuideResult, type HealthCheck, type HealthResult, type HotspotEntry, type HttpMethod, type HttpRequestOptions, type HttpRequestResult, type LaneDiffEntry, type LaneDiffResult, type LaneMergeResult, type LaneMeta, type Lease, type LeaseConflict, type ManagedProcess, type MeasureOptions, type MeasureResult, type OnboardMode, type OnboardOptions, type OnboardResult, type OnboardStepResult, type ParsedError, type ParsedGitStatus, type ParsedOutput, type ParsedTestResult, type ParsedTestSummary, type QueueItem, type QueueState, type RegexTestOptions, type RegexTestResult, type RenameChange, type RenameOptions, type RenameResult, type ReplayEntry, type ReplayOptions, type RestorePoint, type SafetyGate, type SafetyGateResult, type SchemaValidateOptions, type SchemaValidateResult, type ScopeMapEntry, type ScopeMapOptions, type ScopeMapResult, type SessionDigestOptions, type SessionDigestResult, type StashEntry, type StratumCard, type StratumCardOptions, type StratumCardResult, type SymbolGraphContext, type SymbolInfo, type SymbolOptions, type TestRunOptions, type TestRunResult, type TimeOptions, type TimeResult, type TimeoutAction, type TraceNode, type TraceOptions, type TraceResult, type TransformOptions, type TransformResult, type TypedUnknownSeed, type UnknownType, type ValidationError, type WatchEvent, type WatchHandle, type WatchOptions, type WebFetchMode, type WebFetchOptions, type WebFetchResult, type WebSearchOptions, type WebSearchResult, type WebSearchResultItem, type Workset, acquireLease, addToWorkset, analyzeFile, audit, autoClaimTestFailures, bookendReorder, bpeSurprise, changelog, check, checkpointDiff, checkpointGC, checkpointHistory, checkpointLatest, checkpointList, checkpointLoad, checkpointSave, classifyExitCode, codemod, compact, compressOutput, compressTerminalOutput, cosineSimilarity, createRestorePoint, dataTransform, delegate, delegateListModels, deleteWorkset, detectOutputTool, diffParse, digest, dogfoodLog, encode, envInfo, errorResponse, escapeRegExp, estimateTokens, evaluate, evidenceMap, fileSummary, find, findDeadSymbols, findExamples, forgeClassify, forgeGround, formatChangelog, getRegisteredRules, getWorkset, gitAvailable, gitCommitToRef, gitContext, gitExec, graphAugmentSearch, graphQuery, guide, headTailTruncate, health, httpRequest, laneCreate, laneDiff, laneDiscard, laneList, laneMerge, laneStatus, listActiveLeases, listRestorePoints, listWorksets, measure, okResponse, onboard, paragraphTruncate, parseBiome, parseGitStatus, parseOutput, parseSearchResults, parseTsc, parseVitest, processList, processLogs, processStart, processStatus, processStop, queueClear, queueCreate, queueDag, queueDelete, queueDone, queueFail, queueGet, queueList, queueNext, queuePush, regexTest, registerRule, registerRules, releaseLease, removeFromWorkset, rename, replayAppend, replayCapture, replayClear, replayList, replayTrim, resetGitCache, resolvePath, restoreFromPoint, saveWorkset, schemaValidate, scopeMap, scoreLine, scoreLines, segment, sessionDigest, sessionDigestSampling, shannonEntropy, slugForRef, stashClear, stashDelete, stashGet, stashList, stashSet, stratumCard, summarizeCheckResult, symbol, testRun, timeUtils, trace, truncateToTokenBudget, watchList, watchStart, watchStop, webFetch, webSearch };
+export { type AikitNextHint, type AikitResponse, type AikitResponseMeta, type AikitToolError, type AikitToolErrorCode, type AuditCheck, type AuditData, type AuditOptions, type AuditRecommendation, type ChangelogEntry, type ChangelogFormat, type ChangelogOptions, type ChangelogResult, type CheckOptions, type CheckResult, type CheckSummaryResult, type Checkpoint, type ClassifyTrigger, type CodemodChange, type CodemodOptions, type CodemodResult, type CodemodRule, type CompactOptions, type CompactResult, type CompressOutputOptions, type CompressionContext, type CompressionMode, type CompressionResult, type CompressionRule, type ConstraintRef, type DeadSymbol, type DeadSymbolOptions, type DeadSymbolResult, type DelegateOptions, type DelegateResult, type DiffChange, type DiffFile, type DiffHunk, type DiffParseOptions, type DigestFieldEntry, type DigestOptions, type DigestResult, type DigestSource, type DogfoodLogEntry, type DogfoodLogGroupedEntry, type DogfoodLogOptions, type DogfoodLogResult, type EncodeOperation, type EncodeOptions, type EncodeResult, type EnvInfoOptions, type EnvInfoResult, type EvalOptions, type EvalResult, type EvidenceEntry, type EvidenceMapAction, type EvidenceMapResult, type EvidenceMapState, type EvidenceStatus, type Example, FileCache, type FileCacheEntry, type FileCacheStats, type FileMetrics, type FileSummaryOptions, type FileSummaryResult, type FindExamplesOptions, type FindExamplesResult, type FindOptions, type FindResult, type FindResults, type ForgeClassifyCeremony, type ForgeClassifyOptions, type ForgeClassifyResult, type ForgeGroundOptions, type ForgeGroundResult, type ForgeTier, GIT_REF_SLUG_PATTERN, type GateConfig, type GateDecision, type GateResult, type GitContextOptions, type GitContextResult, type GraphAugmentOptions, type GraphAugmentedResult, type GraphQueryOptions, type GraphQueryResult, type GuideRecommendation, type GuideResult, type HealthCheck, type HealthResult, type HotspotEntry, type HttpMethod, type HttpRequestOptions, type HttpRequestResult, type LaneDiffEntry, type LaneDiffResult, type LaneMergeResult, type LaneMeta, type Lease, type LeaseConflict, type ManagedProcess, type MeasureOptions, type MeasureResult, type OnboardMode, type OnboardOptions, type OnboardResult, type OnboardStepResult, type ParsedError, type ParsedGitStatus, type ParsedOutput, type ParsedTestResult, type ParsedTestSummary, type QueueItem, type QueueState, type RegexTestOptions, type RegexTestResult, type RenameChange, type RenameOptions, type RenameResult, type ReplayEntry, type ReplayOptions, type RestorePoint, type SafetyGate, type SafetyGateResult, type SchemaValidateOptions, type SchemaValidateResult, type ScopeMapEntry, type ScopeMapOptions, type ScopeMapResult, type SessionDigestOptions, type SessionDigestResult, type StashEntry, type StratumCard, type StratumCardOptions, type StratumCardResult, type SymbolGraphContext, type SymbolInfo, type SymbolOptions, type TestRunOptions, type TestRunResult, type TimeOptions, type TimeResult, type TimeoutAction, type TraceNode, type TraceOptions, type TraceResult, type TransformOptions, type TransformResult, type TypedUnknownSeed, type UnknownType, type ValidationError, type WatchEvent, type WatchHandle, type WatchOptions, type WebFetchMode, type WebFetchOptions, type WebFetchResult, type WebSearchOptions, type WebSearchResult, type WebSearchResultItem, type Workset, acquireLease, addToWorkset, analyzeFile, audit, autoClaimTestFailures, bookendReorder, bpeSurprise, changelog, check, checkpointDiff, checkpointGC, checkpointHistory, checkpointLatest, checkpointList, checkpointLoad, checkpointSave, classifyExitCode, codemod, compact, compressOutput, compressTerminalOutput, cosineSimilarity, createRestorePoint, dataTransform, delegate, delegateListModels, deleteWorkset, detectOutputTool, diffParse, digest, dogfoodLog, encode, envInfo, errorResponse, escapeRegExp, estimateTokens, evaluate, evidenceMap, fileSummary, find, findDeadSymbols, findExamples, forgeClassify, forgeGround, formatChangelog, getRegisteredRules, getWorkset, gitAvailable, gitCommitToRef, gitContext, gitExec, graphAugmentSearch, graphQuery, guide, headTailTruncate, health, httpRequest, laneCreate, laneDiff, laneDiscard, laneList, laneMerge, laneStatus, listActiveLeases, listRestorePoints, listWorksets, measure, okResponse, onboard, paragraphTruncate, parseBiome, parseGitStatus, parseOutput, parseSearchResults, parseTsc, parseVitest, processList, processLogs, processStart, processStatus, processStop, processStopAll, queueClear, queueCreate, queueDag, queueDelete, queueDone, queueFail, queueGet, queueList, queueNext, queuePush, regexTest, registerRule, registerRules, releaseLease, removeFromWorkset, rename, replayAppend, replayCapture, replayClear, replayList, replayTrim, resetGitCache, resolvePath, restoreFromPoint, saveWorkset, schemaValidate, scopeMap, scoreLine, scoreLines, segment, sessionDigest, sessionDigestSampling, shannonEntropy, slugForRef, stashClear, stashDelete, stashGet, stashList, stashSet, stratumCard, summarizeCheckResult, symbol, testRun, timeUtils, trace, truncateToTokenBudget, watchList, watchStart, watchStop, webFetch, webSearch };