@vitessce/vit-s 2.0.3 → 3.0.0

package/dist-tsc/plugins.test.fixtures.js

@@ -0,0 +1,76 @@
+export const convenienceFileDefsCollapsed = {
+    version: '1.0.15',
+    name: 'My config name',
+    description: 'My config description',
+    initStrategy: 'auto',
+    datasets: [
+        {
+            files: [
+                {
+                    fileType: 'anndata.convenience.zarr',
+                    url: 'http://localhost:8000/my_anndata.zarr',
+                    options: {
+                        cells: {
+                            xy: 'obsm/centroids',
+                        },
+                        cellSets: [
+                            {
+                                groupName: 'Leiden',
+                                setName: 'obs/leiden',
+                            },
+                        ],
+                    },
+                },
+            ],
+            name: 'A',
+            uid: 'A',
+        },
+    ],
+    layout: [],
+};
+export function pluginExpandAnnDataConvenience(fileDef) {
+    return [
+        {
+            fileType: 'anndata-cells.zarr',
+            url: fileDef.url,
+            options: fileDef.options.cells,
+        },
+        {
+            fileType: 'anndata-cell-sets.zarr',
+            url: fileDef.url,
+            options: fileDef.options.cellSets,
+        },
+    ];
+}
+export const convenienceFileDefsExpanded = {
+    version: '1.0.15',
+    name: 'My config name',
+    description: 'My config description',
+    initStrategy: 'auto',
+    datasets: [
+        {
+            files: [
+                {
+                    fileType: 'anndata-cells.zarr',
+                    url: 'http://localhost:8000/my_anndata.zarr',
+                    options: {
+                        xy: 'obsm/centroids',
+                    },
+                },
+                {
+                    fileType: 'anndata-cell-sets.zarr',
+                    url: 'http://localhost:8000/my_anndata.zarr',
+                    options: [
+                        {
+                            groupName: 'Leiden',
+                            setName: 'obs/leiden',
+                        },
+                    ],
+                },
+            ],
+            name: 'A',
+            uid: 'A',
+        },
+    ],
+    layout: [],
+};

package/dist-tsc/schemas/config-0.1.0.schema.json

@@ -0,0 +1,84 @@
+{
+    "$schema": "http://json-schema.org/draft-07/schema#",
+    "$id": "https://github.com/vitessce/vitessce/#dataset",
+    "title": "Vitessce data set",
+    "type": "object",
+    "definitions": {
+        "components": {
+            "type": "array",
+            "items": {
+                "type": "object",
+                "additionalProperties": false,
+                "required": ["component", "x", "y"],
+                "properties": {
+                    "component": { "type": "string" },
+                    "props": { "type": "object" },
+                    "x": { "type": "integer" },
+                    "y": { "type": "integer" },
+                    "w": { "type": "integer" },
+                    "h": { "type": "integer" }
+                }
+            }
+        },
+        "requestInit": {
+            "type": "object",
+            "additionalProperties": false,
+            "required": [],
+            "properties": {
+                "method": {
+                    "type": "string"
+                },
+                "headers": {
+                    "type": "object"
+                },
+                "body": {
+                    "type": "string"
+                },
+                "mode": {
+                    "type": "string"
+                },
+                "credentials": {
+                    "type": "string"
+                },
+                "cache": {
+                    "type": "string"
+                },
+                "redirect": {
+                    "type": "string"
+                },
+                "referrer": {
+                    "type": "string"
+                },
+                "integrity": {
+                    "type": "string"
+                }
+            }
+        }
+    },
+    "additionalProperties": false,
+    "required": ["version", "name", "layers"],
+    "properties": {
+        "name": { "type": "string" },
+        "public": { "type": "boolean" },
+        "description": { "type": "string" },
+        "layers": {
+            "type": "array",
+            "items": {
+                "type": "object",
+                "additionalProperties": false,
+                "required": ["name", "type", "fileType", "url"],
+                "properties": {
+                    "name": { "type": "string" },
+                    "type": { "type": "string" },
+                    "fileType": { "type": "string" },
+                    "url": { "type": "string" },
+                    "requestInit": { "$ref": "#/definitions/requestInit" }
+                }
+            }
+        },
+        "staticLayout": { "$ref": "#/definitions/components" },
+        "version": {
+            "type": "string", "enum": ["0.1.0"]
+        }
+    }
+}