@vitessce/vega 3.5.9 → 3.5.11

package/dist/index.js

@@ -50003,7 +50003,9 @@ const ViewType$1 = {
   LINK_CONTROLLER: "linkController",
   NEUROGLANCER: "neuroglancer",
   DUAL_SCATTERPLOT: "dualScatterplot",
-  TREEMAP: "treemap"
+  TREEMAP: "treemap",
+  SAMPLE_SET_PAIR_MANAGER: "sampleSetPairManager",
+  FEATURE_STATS_TABLE: "featureStatsTable"
 };
 const DataType$1 = {
   OBS_LABELS: "obsLabels",
@@ -50221,6 +50223,7 @@ const CoordinationType$1 = {
   FEATURE_VALUE_COLORMAP: "featureValueColormap",
   FEATURE_VALUE_TRANSFORM: "featureValueTransform",
   FEATURE_VALUE_COLORMAP_RANGE: "featureValueColormapRange",
+  FEATURE_AGGREGATION_STRATEGY: "featureAggregationStrategy",
   OBS_COLOR_ENCODING: "obsColorEncoding",
   SPATIAL_IMAGE_LAYER: "spatialImageLayer",
   SPATIAL_SEGMENTATION_LAYER: "spatialSegmentationLayer",
@@ -50574,6 +50577,7 @@ z.object({
   termColumn: z.string().optional(),
   pValueColumn: z.string(),
   pValueAdjusted: z.boolean().optional(),
+  featureSetLibrary: z.string().optional().describe("Optionally, provide a feature set library name. By default, Reactome_2022."),
   analysisType: z.string().optional().describe("Optionally, provide an analysis_type name. By default, pertpy_hypergeometric.")
 });
 z.object({
@@ -50584,7 +50588,6 @@ z.object({
   foldChangeColumn: z.string().describe("The log-fold change is then calculated between this expected sample and the expected sample with no active covariates from the intercept section."),
   foldChangeTransformation: z.enum(["log2"]).optional(),
   isCredibleEffectColumn: z.string().describe("Column which annotates effects as being credible or not (boolean)."),
-  covariateColumn: z.string().describe("Column which defines the covariate used in the analysis."),
   analysisType: z.string().optional().describe("Optionally, provide an analysis_type name. By default, sccoda_df.")
 });
 const annDataObsLabels = annDataObs;
@@ -79217,7 +79220,9 @@ function VegaPlot(props) {
     spec: partialSpec,
     data: data2,
     getTooltipText,
-    signalListeners
+    signalListeners,
+    renderer = "svg",
+    onNewView
   } = props;
   const classes = useStyles();
   const tooltipClasses = styles();
@@ -79264,11 +79269,12 @@ function VegaPlot(props) {
       },
       signalListeners,
       tooltip: tooltipHandler,
-      renderer: "svg",
-      scaleFactor: 3
+      renderer,
+      scaleFactor: 3,
+      onNewView
     },
     JSON.stringify({ width: spec.width, height: spec.height })
-  ), [spec, data2, signalListeners, tooltipHandler]);
+  ), [spec, data2, signalListeners, tooltipHandler, renderer, onNewView]);
   return spec && data2 && data2.length > 0 ? /* @__PURE__ */ jsxRuntimeExports.jsx(Suspense, { fallback: /* @__PURE__ */ jsxRuntimeExports.jsx("div", { children: "Loading..." }), children: vegaComponent }) : null;
 }
 export {

package/dist-tsc/VegaPlot.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"VegaPlot.d.ts","sourceRoot":"","sources":["../src/VegaPlot.js"],"names":[],"mappings":"AA2CA;;;;;;GAMG;AACH,gCALW,MAAM,sBAiFhB"}
+{"version":3,"file":"VegaPlot.d.ts","sourceRoot":"","sources":["../src/VegaPlot.js"],"names":[],"mappings":"AA2CA;;;;;;GAMG;AACH,gCALW,MAAM,sBAoFhB"}

package/dist-tsc/VegaPlot.js

@@ -40,7 +40,7 @@ function renderTooltipContents(tooltipText) {
  * @param {object} signalListeners Vega signal listeners. Optional.
  */
 export function VegaPlot(props) {
-    const { spec: partialSpec, data, getTooltipText, signalListeners, } = props;
+    const { spec: partialSpec, data, getTooltipText, signalListeners, renderer = 'svg', onNewView, } = props;
     // eslint-disable-next-line no-unused-vars
     const classes = useStyles();
     const tooltipClasses = useTooltipStyles();
@@ -83,6 +83,6 @@ export function VegaPlot(props) {
     }), [partialSpec]);
     const vegaComponent = useMemo(() => (_jsx(ReactVega, { spec: spec, data: {
             [DATASET_NAME]: data,
-        }, signalListeners: signalListeners, tooltip: tooltipHandler, renderer: "svg", scaleFactor: 3 }, JSON.stringify({ width: spec.width, height: spec.height }))), [spec, data, signalListeners, tooltipHandler]);
+        }, signalListeners: signalListeners, tooltip: tooltipHandler, renderer: renderer, scaleFactor: 3, onNewView: onNewView }, JSON.stringify({ width: spec.width, height: spec.height }))), [spec, data, signalListeners, tooltipHandler, renderer, onNewView]);
     return (spec && data && data.length > 0 ? (_jsx(Suspense, { fallback: _jsx("div", { children: "Loading..." }), children: vegaComponent })) : null);
 }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/vega",
-  "version": "3.5.9",
+  "version": "3.5.11",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -22,8 +22,8 @@
     "vega": "^5.21.0",
     "vega-lite": "^5.1.1",
     "vega-tooltip": "^0.27.0",
-    "@vitessce/tooltip": "3.5.9",
-    "@vitessce/legend": "3.5.9"
+    "@vitessce/tooltip": "3.5.11",
+    "@vitessce/legend": "3.5.11"
   },
   "devDependencies": {
     "react": "^18.0.0",

package/src/VegaPlot.js

@@ -54,6 +54,8 @@ export function VegaPlot(props) {
     data,
     getTooltipText,
     signalListeners,
+    renderer = 'svg',
+    onNewView,
   } = props;
 
   // eslint-disable-next-line no-unused-vars
@@ -108,14 +110,15 @@ export function VegaPlot(props) {
       }}
       signalListeners={signalListeners}
       tooltip={tooltipHandler}
-      renderer="svg"
+      renderer={renderer}
       scaleFactor={3}
       // We need to force a re-render when the spec
       // is the same except for changed width/height
       // (to support responsive plots).
       key={JSON.stringify({ width: spec.width, height: spec.height })}
+      onNewView={onNewView}
     />
-  ), [spec, data, signalListeners, tooltipHandler]);
+  ), [spec, data, signalListeners, tooltipHandler, renderer, onNewView]);
 
   return (
     spec && data && data.length > 0 ? (