@vitessce/spatial-utils 3.5.11 → 3.6.0

package/dist/{raw-7d52f1b0.js → raw-DsBRkKLb.js}

@@ -1,5 +1,4 @@
-import { B as BaseDecoder } from "./index-5cecf73a.js";
-import "react";
+import { B as BaseDecoder } from "./index-Bh7EATmb.js";
 class RawDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return buffer;

package/dist/{webimage-244abcbd.js → webimage-uHe_wlsr.js}

@@ -1,5 +1,4 @@
-import { B as BaseDecoder } from "./index-5cecf73a.js";
-import "react";
+import { B as BaseDecoder } from "./index-Bh7EATmb.js";
 class WebImageDecoder extends BaseDecoder {
   constructor() {
     super();

package/dist/{zlib-175cd38d.js → zlib-ZTk3sZPP.js}

@@ -1,11 +1,8 @@
 var __defProp = Object.defineProperty;
 var __defNormalProp = (obj, key, value) => key in obj ? __defProp(obj, key, { enumerable: true, configurable: true, writable: true, value }) : obj[key] = value;
-var __publicField = (obj, key, value) => {
-  __defNormalProp(obj, typeof key !== "symbol" ? key + "" : key, value);
-  return value;
-};
+var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "symbol" ? key + "" : key, value);
 var _a;
-import { z as zlibSync, u as unzlibSync } from "./browser-122c4c35.js";
+import { z as zlibSync, u as unzlibSync } from "./browser-CwsEWr7C.js";
 var Zlib = (_a = class {
   constructor(level = 1) {
     __publicField(this, "level");

package/dist/{zstd-561fda0e.js → zstd-y75FARxZ.js}

@@ -1,11 +1,8 @@
 var __defProp = Object.defineProperty;
 var __defNormalProp = (obj, key, value) => key in obj ? __defProp(obj, key, { enumerable: true, configurable: true, writable: true, value }) : obj[key] = value;
-var __publicField = (obj, key, value) => {
-  __defNormalProp(obj, typeof key !== "symbol" ? key + "" : key, value);
-  return value;
-};
+var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "symbol" ? key + "" : key, value);
 var _a;
-import { _ as __toBinary } from "./chunk-INHXZS53-bee20a28.js";
+import { _ as __toBinary } from "./chunk-INHXZS53-DHVJiuU3.js";
 var zstd_codec = (() => {
   var _a2;
   typeof document != "undefined" ? (_a2 = document.currentScript) == null ? void 0 : _a2.src : void 0;

package/dist-tsc/spatial.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"spatial.d.ts","sourceRoot":"","sources":["../src/spatial.js"],"names":[],"mappings":"AAOA;;;;;;GAMG;AACH,4CAJW,MAAM,SACN,MAAM,GAAG,SAAS,GAChB,MAAM,CAMlB;AAoCD;;;;GAIG;AACH,8BAHW,MAAM,YACN,KAAK,GAAC,IAAI,WAiBpB;AAID,sHAkCC;AAiHD;;GAEG;AACH,qCAFW,KAAK,CAAE,MAAM,CAAC,WAKxB;AAED;;;;;;GAMG;AACH,gDALW,MAAM,eAEJ,MAAM,EAAE,CAuCpB;AAED;;;;;;;;;GASG;AACH,gEAJW,MAAM,EAAE,sBAER,CAAC,MAAM,EAAE,GAAC,IAAI,CAAC,+CAuEzB;AASD;;;IAuBC;AAED,uDAQC;AAED;;;;;;;;GAQG;AACH,6EANW,MAAM,EAAE,GAAC,SAAS,QAElB,MAAM,EAAE,GAAC,SAAS,GAEhB,OAAO,CA4CnB;AAED,6CAOC;AAED;;;;;;;;;GASG;AACH,8EANW,MAAM,EAAE,GAAC,SAAS,YAGlB,MAAM,EAAE,GACN,MAAM,EAAE,CAoDpB;AAvfM;;;;;EAYN;AAEM,yEAkBN;wBAnDuB,SAAS"}
+{"version":3,"file":"spatial.d.ts","sourceRoot":"","sources":["../src/spatial.js"],"names":[],"mappings":"AAOA;;;;;;GAMG;AACH,4CAJW,MAAM,SACN,MAAM,GAAG,SAAS,GAChB,MAAM,CAMlB;AAoCD;;;;GAIG;AACH,8BAHW,MAAM,YACN,KAAK,GAAC,IAAI,WAiBpB;AAID,sHAmCC;AAiHD;;GAEG;AACH,qCAFW,KAAK,CAAE,MAAM,CAAC,WAKxB;AAED;;;;;;GAMG;AACH,gDALW,MAAM,eAEJ,MAAM,EAAE,CAuCpB;AAED;;;;;;;;;GASG;AACH,gEAJW,MAAM,EAAE,sBAER,CAAC,MAAM,EAAE,GAAC,IAAI,CAAC,+CAuEzB;AASD;;;IAuBC;AAED,uDAQC;AAED;;;;;;;;GAQG;AACH,6EANW,MAAM,EAAE,GAAC,SAAS,QAElB,MAAM,EAAE,GAAC,SAAS,GAEhB,OAAO,CA4CnB;AAED,6CAOC;AAED;;;;;;;;;GASG;AACH,8EANW,MAAM,EAAE,GAAC,SAAS,YAGlB,MAAM,EAAE,GACN,MAAM,EAAE,CAoDpB;AAxfM;;;;;EAYN;AAEM,yEAkBN;wBAnDuB,SAAS"}

package/dist-tsc/spatial.js

@@ -81,10 +81,11 @@ export function physicalSizeToMatrix(xSize, ySize, zSize, xUnit, yUnit, zUnit) {
     const scale = sizes.map(i => divide(i, unit('1 um')));
     // TODO: is this still needed
     // sizes are special objects with own equals method - see `unit` in declaration
-    if (!sizes[0].equals(sizes[1])) {
-        // Handle scaling in the Y direction for non-square pixels
-        scale[1] = divide(sizes[1], sizes[0]);
-    }
+    // This messess the dimensions when the x & y are little different (e.g., for the geomx data)
+    // if (!sizes[0].equals(sizes[1])) {
+    //   // Handle scaling in the Y direction for non-square pixels
+    //   scale[1] = divide(sizes[1], sizes[0]);
+    // }
     // END TODO: is this still needed
     // Add in z dimension needed for Matrix4 scale API.
     if (!scale[2]) {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/spatial-utils",
-  "version": "3.5.11",
+  "version": "3.6.0",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -20,11 +20,11 @@
     "zarrita": "0.4.0",
     "math.gl": "^3.5.6",
     "mathjs": "^9.2.0",
-    "@vitessce/gl": "3.5.11",
-    "@vitessce/utils": "3.5.11",
-    "@vitessce/zarr-utils": "3.5.11",
-    "@vitessce/constants-internal": "3.5.11",
-    "@vitessce/globals": "3.5.11"
+    "@vitessce/gl": "3.6.0",
+    "@vitessce/utils": "3.6.0",
+    "@vitessce/zarr-utils": "3.6.0",
+    "@vitessce/constants-internal": "3.6.0",
+    "@vitessce/globals": "3.6.0"
   },
   "scripts": {
     "bundle": "pnpm exec vite build -c ../../../scripts/vite.config.js",

package/src/spatial.js

@@ -95,10 +95,11 @@ export function physicalSizeToMatrix(xSize, ySize, zSize, xUnit, yUnit, zUnit) {
 
   // TODO: is this still needed
   // sizes are special objects with own equals method - see `unit` in declaration
-  if (!sizes[0].equals(sizes[1])) {
-    // Handle scaling in the Y direction for non-square pixels
-    scale[1] = divide(sizes[1], sizes[0]);
-  }
+  // This messess the dimensions when the x & y are little different (e.g., for the geomx data)
+  // if (!sizes[0].equals(sizes[1])) {
+  //   // Handle scaling in the Y direction for non-square pixels
+  //   scale[1] = divide(sizes[1], sizes[0]);
+  // }
   // END TODO: is this still needed
 
   // Add in z dimension needed for Matrix4 scale API.