@vitessce/scatterplot-embedding 4.0.0-test.3 → 4.0.0

package/dist/{deflate-BEwPMsUO.js → deflate-DDd0M1_3.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { B as BaseDecoder } from "./index-CVstmpOe.js";
+import { B as BaseDecoder } from "./index-CJTTUgHC.js";
 class DeflateDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return inflate_1(new Uint8Array(buffer)).buffer;

package/dist/{index-CVstmpOe.js → index-CJTTUgHC.js}

@@ -9761,6 +9761,7 @@ const FileType$1 = {
   OBS_LABELS_MUDATA_ZARR: "obsLabels.mudata.zarr",
   FEATURE_LABELS_MUDATA_ZARR: "featureLabels.mudata.zarr",
   GENOMIC_PROFILES_ZARR: "genomic-profiles.zarr",
+  GENOMIC_PROFILES_ZARR_ZIP: "genomic-profiles.zarr.zip",
   NEIGHBORHOODS_JSON: "neighborhoods.json",
   // OME-TIFF
   IMAGE_OME_TIFF: "image.ome-tiff",
@@ -10028,6 +10029,7 @@ const ViewHelpMapping = {
   [FileType$1.OBS_LABELS_MOLECULES_JSON]: DataType$2.OBS_LABELS,
   // For old file types
   [FileType$1.GENOMIC_PROFILES_ZARR]: DataType$2.GENOMIC_PROFILES,
+  [FileType$1.GENOMIC_PROFILES_ZARR_ZIP]: DataType$2.GENOMIC_PROFILES,
   [FileType$1.NEIGHBORHOODS_JSON]: DataType$2.NEIGHBORHOODS
 });
 ({
@@ -10192,6 +10194,10 @@ const ViewHelpMapping = {
   },
   [FileType$1.OBS_EMBEDDING_SPATIALDATA_ZARR]: {
     zip: FileType$1.OBS_EMBEDDING_SPATIALDATA_ZARR_ZIP
+  },
+  // For genomic profiles:
+  [FileType$1.GENOMIC_PROFILES_ZARR]: {
+    zip: FileType$1.GENOMIC_PROFILES_ZARR_ZIP
   }
 });
 [
@@ -122546,22 +122552,22 @@ function addDecoder(cases, importFn) {
   }
   cases.forEach((c2) => registry$1.set(c2, importFn));
 }
-addDecoder([void 0, 1], () => import("./raw-BQUq1MQs.js").then((m2) => m2.default));
-addDecoder(5, () => import("./lzw-BWsoik4B.js").then((m2) => m2.default));
+addDecoder([void 0, 1], () => import("./raw-CnEsnr_U.js").then((m2) => m2.default));
+addDecoder(5, () => import("./lzw-DzHCzpWW.js").then((m2) => m2.default));
 addDecoder(6, () => {
   throw new Error("old style JPEG compression is not supported.");
 });
-addDecoder(7, () => import("./jpeg-LChDzNmb.js").then((m2) => m2.default));
-addDecoder([8, 32946], () => import("./deflate-BEwPMsUO.js").then((m2) => m2.default));
-addDecoder(32773, () => import("./packbits-By4hVwFm.js").then((m2) => m2.default));
+addDecoder(7, () => import("./jpeg-D8TMgzJ-.js").then((m2) => m2.default));
+addDecoder([8, 32946], () => import("./deflate-DDd0M1_3.js").then((m2) => m2.default));
+addDecoder(32773, () => import("./packbits-IenIuEyy.js").then((m2) => m2.default));
 addDecoder(
   34887,
-  () => import("./lerc-Ys9lIw5R.js").then(async (m2) => {
+  () => import("./lerc-DIqN_Nd5.js").then(async (m2) => {
     await m2.zstd.init();
     return m2;
   }).then((m2) => m2.default)
 );
-addDecoder(50001, () => import("./webimage-R--z1T_z.js").then((m2) => m2.default));
+addDecoder(50001, () => import("./webimage-bn5lsJYe.js").then((m2) => m2.default));
 function decodeRowAcc(row, stride) {
   let length2 = row.length - stride;
   let offset2 = 0;

package/dist/index.js

@@ -1,4 +1,4 @@
-import { D, E } from "./index-CVstmpOe.js";
+import { D, E } from "./index-CJTTUgHC.js";
 export {
   D as DualEmbeddingScatterplotSubscriber,
   E as EmbeddingScatterplotSubscriber

package/dist/{jpeg-LChDzNmb.js → jpeg-D8TMgzJ-.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-CVstmpOe.js";
+import { B as BaseDecoder } from "./index-CJTTUgHC.js";
 const dctZigZag = new Int32Array([
   0,
   1,

package/dist/{lerc-Ys9lIw5R.js → lerc-DIqN_Nd5.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { g as getDefaultExportFromCjs, B as BaseDecoder } from "./index-CVstmpOe.js";
+import { g as getDefaultExportFromCjs, B as BaseDecoder } from "./index-CJTTUgHC.js";
 const LercParameters = {
   AddCompression: 1
 };

package/dist/{lzw-BWsoik4B.js → lzw-DzHCzpWW.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-CVstmpOe.js";
+import { B as BaseDecoder } from "./index-CJTTUgHC.js";
 const MIN_BITS = 9;
 const CLEAR_CODE = 256;
 const EOI_CODE = 257;

package/dist/{packbits-By4hVwFm.js → packbits-IenIuEyy.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-CVstmpOe.js";
+import { B as BaseDecoder } from "./index-CJTTUgHC.js";
 class PackbitsDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     const dataView = new DataView(buffer);

package/dist/{raw-BQUq1MQs.js → raw-CnEsnr_U.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-CVstmpOe.js";
+import { B as BaseDecoder } from "./index-CJTTUgHC.js";
 class RawDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return buffer;

package/dist/{webimage-R--z1T_z.js → webimage-bn5lsJYe.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-CVstmpOe.js";
+import { B as BaseDecoder } from "./index-CJTTUgHC.js";
 class WebImageDecoder extends BaseDecoder {
   constructor() {
     super();

package/dist-tsc/DualEmbeddingScatterplotSubscriber.js

@@ -35,3 +35,4 @@ export function DualEmbeddingScatterplotSubscriber(props) {
                         ? `Scatterplot (${embeddingType}), ${caseSampleSetSelection?.[0]?.at(-1)}`
                         : null), sampleSetSelection: caseSampleSetSelection }) }), isCaseCtrl ? (_jsx("div", { style: { width: '50%', display: 'flex', flexDirection: 'column' }, children: _jsx(EmbeddingScatterplotSubscriber, { ...props, uuid: `${uuid}-ctrl`, title: `Scatterplot (${embeddingType}), ${ctrlSampleSetSelection?.[0]?.at(-1)}`, sampleSetSelection: ctrlSampleSetSelection }) })) : null] }));
 }
+//# sourceMappingURL=DualEmbeddingScatterplotSubscriber.js.map

package/dist-tsc/DualEmbeddingScatterplotSubscriber.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"DualEmbeddingScatterplotSubscriber.js","sourceRoot":"","sources":["../src/DualEmbeddingScatterplotSubscriber.js"],"names":[],"mappings":";AAAA,OAAO,KAAK,EAAE,EAAE,OAAO,EAAE,MAAM,OAAO,CAAC;AACvC,OAAO,EACL,eAAe,EACf,qBAAqB,GACtB,MAAM,iBAAiB,CAAC;AACzB,OAAO,EAAE,QAAQ,EAAE,4BAA4B,EAAE,MAAM,8BAA8B,CAAC;AACtF,OAAO,EAAE,8BAA8B,EAAE,MAAM,qCAAqC,CAAC;AAGrF;;;;;;;;;;;;;;;GAeG;AACH,MAAM,UAAU,kCAAkC,CAAC,KAAK;IACtD,MAAM,EACJ,IAAI,EACJ,kBAAkB,EAAE,qBAAqB,GAC1C,GAAG,KAAK,CAAC;IAEV,MAAM,kBAAkB,GAAG,qBAAqB,CAAC,qBAAqB,CAAC,CAAC;IAExE,2CAA2C;IAC3C,MAAM,CAAC,EACL,aAAa,EACb,kBAAkB,GACnB,CAAC,GAAG,eAAe,CAAC,4BAA4B,CAAC,QAAQ,CAAC,gBAAgB,CAAC,EAAE,kBAAkB,CAAC,CAAC;IAElG,MAAM,UAAU,GAAG,KAAK,CAAC,OAAO,CAAC,kBAAkB,CAAC,IAAI,kBAAkB,CAAC,MAAM,KAAK,CAAC,CAAC;IAExF,MAAM,sBAAsB,GAAG,OAAO,CAAC,GAAG,EAAE,CAAC,CAC3C,kBAAkB,EAAE,CAAC,CAAC,CAAC;QACrB,CAAC,CAAC,CAAC,kBAAkB,CAAC,CAAC,CAAC,CAAC;QACzB,CAAC,CAAC,IAAI,CACT,EAAE,CAAC,kBAAkB,CAAC,CAAC,CAAC;IACzB,MAAM,sBAAsB,GAAG,OAAO,CAAC,GAAG,EAAE,CAAC,CAC3C,kBAAkB,EAAE,CAAC,CAAC,CAAC;QACrB,CAAC,CAAC,CAAC,kBAAkB,CAAC,CAAC,CAAC,CAAC;QACzB,CAAC,CAAC,IAAI,CACT,EAAE,CAAC,kBAAkB,CAAC,CAAC,CAAC;IAEzB,OAAO,CACL,eAAK,KAAK,EAAE,EAAE,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE,aAAa,EAAE,KAAK,EAAE,aAClF,cAAK,KAAK,EAAE,EAAE,KAAK,EAAE,UAAU,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE,aAAa,EAAE,QAAQ,EAAE,YAC1F,KAAC,8BAA8B,OACzB,KAAK,EACT,IAAI,EAAE,GAAG,IAAI,OAAO,EACpB,KAAK,EAAE,CAAC,UAAU;wBAChB,CAAC,CAAC,gBAAgB,aAAa,MAAM,sBAAsB,EAAE,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE;wBAC1E,CAAC,CAAC,IAAI,CACP,EACD,kBAAkB,EAAE,sBAAsB,GAC1C,GACE,EACL,UAAU,CAAC,CAAC,CAAC,CACZ,cAAK,KAAK,EAAE,EAAE,KAAK,EAAE,KAAK,EAAE,OAAO,EAAE,MAAM,EAAE,aAAa,EAAE,QAAQ,EAAE,YACpE,KAAC,8BAA8B,OACzB,KAAK,EACT,IAAI,EAAE,GAAG,IAAI,OAAO,EACpB,KAAK,EAAE,gBAAgB,aAAa,MAAM,sBAAsB,EAAE,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,EAC/E,kBAAkB,EAAE,sBAAsB,GAC1C,GACE,CACP,CAAC,CAAC,CAAC,IAAI,IACJ,CACP,CAAC;AACJ,CAAC"}

package/dist-tsc/EmbeddingScatterplotOptions.js

@@ -17,3 +17,4 @@ export default function EmbeddingScatterplotOptions(props) {
                         }, children: mappings.map(name => (_jsx("option", { value: name, children: name }, name))) }) })] }))
         : null;
 }
+//# sourceMappingURL=EmbeddingScatterplotOptions.js.map

package/dist-tsc/EmbeddingScatterplotOptions.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"EmbeddingScatterplotOptions.js","sourceRoot":"","sources":["../src/EmbeddingScatterplotOptions.js"],"names":[],"mappings":";AAAA,OAAO,KAAK,MAAM,OAAO,CAAC;AAC1B,OAAO,EAAE,KAAK,EAAE,MAAM,YAAY,CAAC;AACnC,OAAO,EAAE,SAAS,EAAE,QAAQ,EAAE,MAAM,kBAAkB,CAAC;AACvD,OAAO,EAAE,oBAAoB,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AAErE,MAAM,CAAC,OAAO,UAAU,2BAA2B,CAAC,KAAK;IACvD,MAAM,EACJ,oBAAoB,EACpB,QAAQ,EACR,eAAe,EACf,kBAAkB,GACnB,GAAG,KAAK,CAAC;IAEV,MAAM,EAAE,OAAO,EAAE,GAAG,oBAAoB,EAAE,CAAC;IAE3C,MAAM,oBAAoB,GAAG,KAAK,EAAE,CAAC;IAErC,4CAA4C;IAC5C,MAAM,2BAA2B,GAAG,CAAC,KAAK,EAAE,EAAE;QAC5C,kBAAkB,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;IACzC,CAAC,CAAC;IAEF,OAAO,oBAAoB;QACzB,CAAC,CAAC,CACA,MAAC,QAAQ,eACP,KAAC,SAAS,IAAC,SAAS,EAAE,OAAO,CAAC,SAAS,EAAE,OAAO,EAAC,MAAM,EAAC,KAAK,EAAC,KAAK,YACjE,gBACE,OAAO,EAAE,8BAA8B,oBAAoB,EAAE,+BAGvD,GACE,EACZ,KAAC,SAAS,IAAC,SAAS,EAAE,OAAO,CAAC,SAAS,EAAE,OAAO,EAAC,MAAM,YACrD,KAAC,YAAY,IACX,SAAS,EAAE,OAAO,CAAC,MAAM,EACzB,KAAK,EAAE,eAAe,EACtB,QAAQ,EAAE,2BAA2B,EACrC,UAAU,EAAE;4BACV,EAAE,EAAE,8BAA8B,oBAAoB,EAAE;yBACzD,YAEA,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CACpB,iBAAmB,KAAK,EAAE,IAAI,YAC3B,IAAI,IADM,IAAI,CAER,CACV,CAAC,GACW,GACL,IACH,CACZ;QACD,CAAC,CAAC,IAAI,CAAC;AACX,CAAC"}

package/dist-tsc/EmbeddingScatterplotSubscriber.js

@@ -330,3 +330,4 @@ export function EmbeddingScatterplotSubscriber(props) {
                 // Contour percentile legend
                 pointsVisible: embeddingPointsVisible, contoursVisible: embeddingContoursVisible, contoursFilled: embeddingContoursFilled, contourPercentiles: contourPercentiles || DEFAULT_CONTOUR_PERCENTILES, contourThresholds: contourThresholds, featureAggregationStrategy: featureAggregationStrategyToUse })] }));
 }
+//# sourceMappingURL=EmbeddingScatterplotSubscriber.js.map

package/dist-tsc/EmbeddingScatterplotSubscriber.js.map

@@ -0,0 +1 @@
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package/dist-tsc/constants.js

@@ -1 +1,2 @@
 export const DEFAULT_CONTOUR_PERCENTILES = [0.09, 0.9, 0.99];
+//# sourceMappingURL=constants.js.map

package/dist-tsc/constants.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"constants.js","sourceRoot":"","sources":["../src/constants.js"],"names":[],"mappings":"AAAA,MAAM,CAAC,MAAM,2BAA2B,GAAG,CAAC,IAAI,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC"}

package/dist-tsc/index.js

@@ -1,2 +1,3 @@
 export { EmbeddingScatterplotSubscriber } from './EmbeddingScatterplotSubscriber.js';
 export { DualEmbeddingScatterplotSubscriber } from './DualEmbeddingScatterplotSubscriber.js';
+//# sourceMappingURL=index.js.map

package/dist-tsc/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.js"],"names":[],"mappings":"AAAA,OAAO,EAAE,8BAA8B,EAAE,MAAM,qCAAqC,CAAC;AACrF,OAAO,EAAE,kCAAkC,EAAE,MAAM,yCAAyC,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/scatterplot-embedding",
-  "version": "4.0.0-test.3",
+  "version": "4.0.0",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -20,13 +20,13 @@
     "lodash-es": "^4.17.21",
     "react-aria": "^3.47.0",
     "@turf/circle": "^7.2.0",
-    "@vitessce/styles": "4.0.0-test.3",
-    "@vitessce/constants-internal": "4.0.0-test.3",
-    "@vitessce/scatterplot": "4.0.0-test.3",
-    "@vitessce/sets-utils": "4.0.0-test.3",
-    "@vitessce/utils": "4.0.0-test.3",
-    "@vitessce/legend": "4.0.0-test.3",
-    "@vitessce/vit-s": "4.0.0-test.3"
+    "@vitessce/constants-internal": "4.0.0",
+    "@vitessce/styles": "4.0.0",
+    "@vitessce/legend": "4.0.0",
+    "@vitessce/scatterplot": "4.0.0",
+    "@vitessce/sets-utils": "4.0.0",
+    "@vitessce/utils": "4.0.0",
+    "@vitessce/vit-s": "4.0.0"
   },
   "devDependencies": {
     "react": "19.2.6",