@vitessce/scatterplot-embedding 3.8.3 → 3.8.5

package/dist/{deflate-BPNH0-gs.js → deflate-Dr6bxD0w.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { B as BaseDecoder } from "./index-BUnpJvPA.js";
+import { B as BaseDecoder } from "./index-DXCCF6LM.js";
 class DeflateDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return inflate_1(new Uint8Array(buffer)).buffer;

package/dist/{index-BUnpJvPA.js → index-DXCCF6LM.js}

@@ -10715,6 +10715,7 @@ const COMPONENT_COORDINATION_TYPES = {
     CoordinationType$1.FEATURE_SELECTION,
     CoordinationType$1.FEATURE_VALUE_COLORMAP,
     CoordinationType$1.FEATURE_VALUE_COLORMAP_RANGE,
+    CoordinationType$1.FEATURE_AGGREGATION_STRATEGY,
     // TODO: CoordinationType.FEATURE_COLOR_ENCODING,
     // TODO: CoordinationType.ADDITIONAL_FEATURE_SETS,
     CoordinationType$1.TOOLTIPS_VISIBLE,
@@ -11314,7 +11315,10 @@ z.object({
   obsSets: obsSetsSpatialdataSchema,
   obsEmbedding: obsEmbeddingSpatialdataSchemaConvenience,
   // TODO: obsLabels
-  // TODO: featureLabels
+  featureLabels: z.union([
+    annDataFeatureLabels,
+    z.array(annDataConvenienceFeatureLabelsItem)
+  ]),
   // TODO: allow specifying tablePath and region at the top-level here.
   coordinateSystem: z.string().optional().describe("The name of a coordinate transformation output used to transform all elements which lack a per-element coordinateSystem property.")
 }).partial();
@@ -123344,22 +123348,22 @@ function addDecoder(cases, importFn) {
   }
   cases.forEach((c2) => registry$1.set(c2, importFn));
 }
-addDecoder([void 0, 1], () => import("./raw-CYgoEHqR.js").then((m2) => m2.default));
-addDecoder(5, () => import("./lzw-C3MiI_oL.js").then((m2) => m2.default));
+addDecoder([void 0, 1], () => import("./raw-CBdLq0ga.js").then((m2) => m2.default));
+addDecoder(5, () => import("./lzw-Dbo7OpaS.js").then((m2) => m2.default));
 addDecoder(6, () => {
   throw new Error("old style JPEG compression is not supported.");
 });
-addDecoder(7, () => import("./jpeg-HkMzLFbL.js").then((m2) => m2.default));
-addDecoder([8, 32946], () => import("./deflate-BPNH0-gs.js").then((m2) => m2.default));
-addDecoder(32773, () => import("./packbits-CtWmjnkM.js").then((m2) => m2.default));
+addDecoder(7, () => import("./jpeg-UKzKGs1t.js").then((m2) => m2.default));
+addDecoder([8, 32946], () => import("./deflate-Dr6bxD0w.js").then((m2) => m2.default));
+addDecoder(32773, () => import("./packbits-0X-GrQId.js").then((m2) => m2.default));
 addDecoder(
   34887,
-  () => import("./lerc-BL5Xy_sd.js").then(async (m2) => {
+  () => import("./lerc-D62tGpqi.js").then(async (m2) => {
     await m2.zstd.init();
     return m2;
   }).then((m2) => m2.default)
 );
-addDecoder(50001, () => import("./webimage-yN7Q3b16.js").then((m2) => m2.default));
+addDecoder(50001, () => import("./webimage-C2vUudNG.js").then((m2) => m2.default));
 function decodeRowAcc(row, stride) {
   let length2 = row.length - stride;
   let offset2 = 0;
@@ -153409,7 +153413,9 @@ function EmbeddingScatterplotSubscriber(props) {
     // Average fill density for dynamic opacity calculation.
     averageFillDensity,
     // For the dual scatterplot:
-    sampleSetSelection: sampleSetSelectionFromProps
+    sampleSetSelection: sampleSetSelectionFromProps,
+    // Circle scale factor:
+    circleScaleFactor = 0.8
   } = props;
   const loaders = useLoaders();
   const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
@@ -153799,7 +153805,7 @@ function EmbeddingScatterplotSubscriber(props) {
       return null;
     }
     const size = Math.max(xRange, yRange);
-    const radius = size * Math.sqrt(2) / 2 * 0.8;
+    const radius = size * Math.sqrt(2) / 2 * circleScaleFactor;
     const numPoints = 96;
     const options = { steps: numPoints, units: "degrees" };
     const circlePolygon = circle$2(center2, radius, options);
@@ -153809,7 +153815,7 @@ function EmbeddingScatterplotSubscriber(props) {
       polygon: circlePolygon,
       steps: numPoints
     };
-  }, [originalViewState, width2, height2, xRange, yRange]);
+  }, [originalViewState, width2, height2, xRange, yRange, circleScaleFactor]);
   const [alignedEmbeddingIndex, alignedEmbeddingData] = useMemo(() => {
     if ((obsEmbedding == null ? void 0 : obsEmbedding.data) && obsEmbeddingIndex && matrixObsIndex) {
       const matrixIndexMap = new Map(matrixObsIndex.map((key, i2) => [key, i2]));

package/dist/index.js

@@ -1,4 +1,4 @@
-import { D, E } from "./index-BUnpJvPA.js";
+import { D, E } from "./index-DXCCF6LM.js";
 export {
   D as DualEmbeddingScatterplotSubscriber,
   E as EmbeddingScatterplotSubscriber

package/dist/{jpeg-HkMzLFbL.js → jpeg-UKzKGs1t.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-BUnpJvPA.js";
+import { B as BaseDecoder } from "./index-DXCCF6LM.js";
 const dctZigZag = new Int32Array([
   0,
   1,

package/dist/{lerc-BL5Xy_sd.js → lerc-D62tGpqi.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { g as getDefaultExportFromCjs, B as BaseDecoder } from "./index-BUnpJvPA.js";
+import { g as getDefaultExportFromCjs, B as BaseDecoder } from "./index-DXCCF6LM.js";
 const LercParameters = {
   AddCompression: 1
 };

package/dist/{lzw-C3MiI_oL.js → lzw-Dbo7OpaS.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-BUnpJvPA.js";
+import { B as BaseDecoder } from "./index-DXCCF6LM.js";
 const MIN_BITS = 9;
 const CLEAR_CODE = 256;
 const EOI_CODE = 257;

package/dist/{packbits-CtWmjnkM.js → packbits-0X-GrQId.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-BUnpJvPA.js";
+import { B as BaseDecoder } from "./index-DXCCF6LM.js";
 class PackbitsDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     const dataView = new DataView(buffer);

package/dist/{raw-CYgoEHqR.js → raw-CBdLq0ga.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-BUnpJvPA.js";
+import { B as BaseDecoder } from "./index-DXCCF6LM.js";
 class RawDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return buffer;

package/dist/{webimage-yN7Q3b16.js → webimage-C2vUudNG.js}

@@ -1,4 +1,4 @@
-import { B as BaseDecoder } from "./index-BUnpJvPA.js";
+import { B as BaseDecoder } from "./index-DXCCF6LM.js";
 class WebImageDecoder extends BaseDecoder {
   constructor() {
     super();

package/dist-tsc/EmbeddingScatterplotSubscriber.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"EmbeddingScatterplotSubscriber.d.ts","sourceRoot":"","sources":["../src/EmbeddingScatterplotSubscriber.js"],"names":[],"mappings":"AA6CA;;;;;;;;;;;;GAYG;AACH,sDAVG;IAAsB,IAAI,EAAlB,MAAM;IACQ,KAAK,EAAnB,MAAM;IACQ,kBAAkB,EAAhC,MAAM;IAEU,mBAAmB;IAErB,KAAK,EAAnB,MAAM;IACQ,kBAAkB,EAAhC,MAAM;CAEhB,eAgmBA"}
+{"version":3,"file":"EmbeddingScatterplotSubscriber.d.ts","sourceRoot":"","sources":["../src/EmbeddingScatterplotSubscriber.js"],"names":[],"mappings":"AA6CA;;;;;;;;;;;;GAYG;AACH,sDAVG;IAAsB,IAAI,EAAlB,MAAM;IACQ,KAAK,EAAnB,MAAM;IACQ,kBAAkB,EAAhC,MAAM;IAEU,mBAAmB;IAErB,KAAK,EAAnB,MAAM;IACQ,kBAAkB,EAAhC,MAAM;CAEhB,eAimBA"}

package/dist-tsc/EmbeddingScatterplotSubscriber.js

@@ -29,7 +29,9 @@ export function EmbeddingScatterplotSubscriber(props) {
     // Average fill density for dynamic opacity calculation.
     averageFillDensity, 
     // For the dual scatterplot:
-    sampleSetSelection: sampleSetSelectionFromProps, } = props;
+    sampleSetSelection: sampleSetSelectionFromProps, 
+    // Circle scale factor:
+    circleScaleFactor = 0.8, } = props;
     const loaders = useLoaders();
     const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
     const setComponentHover = useSetComponentHover();
@@ -226,7 +228,7 @@ export function EmbeddingScatterplotSubscriber(props) {
         const size = Math.max(xRange, yRange);
         // TODO: figure out a better solution than
         // scaling the radius by the arbitrary 0.8?
-        const radius = ((size * Math.sqrt(2)) / 2) * 0.8;
+        const radius = ((size * Math.sqrt(2)) / 2) * circleScaleFactor;
         const numPoints = 96;
         const options = { steps: numPoints, units: 'degrees' };
         const circlePolygon = circle(center, radius, options);
@@ -236,7 +238,7 @@ export function EmbeddingScatterplotSubscriber(props) {
             polygon: circlePolygon,
             steps: numPoints,
         };
-    }, [originalViewState, width, height, xRange, yRange]);
+    }, [originalViewState, width, height, xRange, yRange, circleScaleFactor]);
     // It is possible for the embedding index+data to be out of order
     // with respect to the matrix index+data. Here, we align the embedding
     // data so that the rows are ordered the same as the matrix rows.

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/scatterplot-embedding",
-  "version": "3.8.3",
+  "version": "3.8.5",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -20,13 +20,13 @@
     "lodash-es": "^4.17.21",
     "react-aria": "^3.28.0",
     "@turf/circle": "^7.2.0",
-    "@vitessce/styles": "3.8.3",
-    "@vitessce/constants-internal": "3.8.3",
-    "@vitessce/legend": "3.8.3",
-    "@vitessce/scatterplot": "3.8.3",
-    "@vitessce/sets-utils": "3.8.3",
-    "@vitessce/utils": "3.8.3",
-    "@vitessce/vit-s": "3.8.3"
+    "@vitessce/styles": "3.8.5",
+    "@vitessce/constants-internal": "3.8.5",
+    "@vitessce/legend": "3.8.5",
+    "@vitessce/scatterplot": "3.8.5",
+    "@vitessce/sets-utils": "3.8.5",
+    "@vitessce/utils": "3.8.5",
+    "@vitessce/vit-s": "3.8.5"
   },
   "devDependencies": {
     "react": "18.3.1",

package/src/EmbeddingScatterplotSubscriber.js

@@ -69,9 +69,10 @@ export function EmbeddingScatterplotSubscriber(props) {
     helpText = ViewHelpMapping.SCATTERPLOT,
     // Average fill density for dynamic opacity calculation.
     averageFillDensity,
-
     // For the dual scatterplot:
     sampleSetSelection: sampleSetSelectionFromProps,
+    // Circle scale factor:
+    circleScaleFactor = 0.8,
   } = props;
 
   const loaders = useLoaders();
@@ -434,7 +435,7 @@ export function EmbeddingScatterplotSubscriber(props) {
     const size = Math.max(xRange, yRange);
     // TODO: figure out a better solution than
     // scaling the radius by the arbitrary 0.8?
-    const radius = ((size * Math.sqrt(2)) / 2) * 0.8;
+    const radius = ((size * Math.sqrt(2)) / 2) * circleScaleFactor;
     const numPoints = 96;
     const options = { steps: numPoints, units: 'degrees' };
     const circlePolygon = circle(center, radius, options);
@@ -444,7 +445,7 @@ export function EmbeddingScatterplotSubscriber(props) {
       polygon: circlePolygon,
       steps: numPoints,
     };
-  }, [originalViewState, width, height, xRange, yRange]);
+  }, [originalViewState, width, height, xRange, yRange, circleScaleFactor]);
 
   // It is possible for the embedding index+data to be out of order
   // with respect to the matrix index+data. Here, we align the embedding